New junction evidence | |||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | CP002094 | = 2131338 | NA (NA) | 9 (0.120) +CGGCTCATGATGGAGGATACAGGGC |
7/146 | 9.2 | NA | noncoding (7/73 nt) | LLNZ_t13347 | tRNA‑Thr |
? | CP002094 | 2131656 = | NA (NA) | noncoding (58/73 nt) | LLNZ_t13355 | tRNA‑Val | |||||
Rejected: Coverage evenness skew score above cutoff. |
ACAATGCCGACTACATGATTCGAACACGCGACCCTCTGATTACAAATCAGATGCTCTACCAACTGAGCTAAGTCGGCTAATAACCTAGTATGCGGATGA > CP002094/2131268‑2131366 | actaTGCCGACTACATGATTCGAACACGCGACCCTCTGATTGCAAATCAGATGCTCTACCAACTGAGCTAAGTCGGCTAATAACCTAGTATGCGGATGa < 2:651337/96‑1 (MQ=0) | ACAATGCCGACTACATGATTCGAACACGCGACCCTCTGATTACAAATCAGATGCTCTACCAACTGAGCTAAGTCGGCTAATAACCTAGTATGCGGATGA > CP002094/2131268‑2131366 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 6 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |