| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | CP002094 | = 2131338 | NA (NA) | 9 (0.120) +CGGCTCATGATGGAGGATACAGGGC |
7/146 | 9.2 | NA | noncoding (7/73 nt) | LLNZ_t13347 | tRNA‑Thr |
| ? | CP002094 | 2131656 = | NA (NA) | noncoding (58/73 nt) | LLNZ_t13355 | tRNA‑Val | |||||
| Rejected: Coverage evenness skew score above cutoff. | |||||||||||
ACAATGCCGACTACATGATTCGAACACGCGACCCTCTGATTACAAATCAGATGCTCTACCAACTGAGCTAAGTCGGCTAATAACCTAGTATGCGGATGA > CP002094/2131268‑2131366 | actaTGCCGACTACATGATTCGAACACGCGACCCTCTGATTGCAAATCAGATGCTCTACCAACTGAGCTAAGTCGGCTAATAACCTAGTATGCGGATGa < 2:651337/96‑1 (MQ=0) | ACAATGCCGACTACATGATTCGAACACGCGACCCTCTGATTACAAATCAGATGCTCTACCAACTGAGCTAAGTCGGCTAATAACCTAGTATGCGGATGA > CP002094/2131268‑2131366 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 6 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |