Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	CP002094	673606–675687	676703–675714	28–3098	46 [44]	[45] 48	LLNZ_03540–LLNZ_03555	LLNZ_03540,LLNZ_03545,LLNZ_03550,LLNZ_03555

TATGACGTGGCCCCTGCAACAATTTATAAATGGATAGACCTCTACTGTAAAGGGCCATGCTAAAATGTAGGAAACGGGCCATTGAAAATGTAGGTTAACTTTAAAATTGTGATAGGCTTTTCCTTATGAGAAAAGACATCCTA  >  CP002094/673507‑673649                                                                                                   |                                             tatGACGTGGCCCCTGCAACAATTTATAAATGGATAGACCTCTACTGTAAAGGGCCATGCTAAAATGTAGGAAACGGGCCATTGAAAATGTAGGTTAAc                                              <  2:1563076/99‑1 (MQ=255) tatGACGTGGCCCCTGCAACAATTTATAAATGGATAGACCTCTACTGTAAAGGGCCATGCTAAAATGTAGGAAACGGGCCATTGAAAATGTAGGTTAAc                                              >  2:1591177/1‑99 (MQ=255)   tGACGTGGCCCCTGCAACAATTTATAAATGGATAGACCTCTACTGTAAAGGGCCATGCTAAAATGTAGGAAACGGGCCATTGAAAATGTAGGTTAACtt                                            >  2:892488/1‑99 (MQ=255)   tGACGTGGCCCCTGCAACAATTTATAAATGGATAGACCTCTACTGTAAAGGGCCATGCTAAAATGTAGGAAACGGGCCATTGAAAATGTAGGTTAACtt                                            >  2:914663/1‑99 (MQ=255)      cGTGGCCCCTGCAACAATTTATAAATGGATAGACCTCTACTGTAAAGGGCCATGCTAAAATGTAGGAAACGGGCCATTGAAAATGTAGGTTAACTTTaa                                         >  1:653218/1‑99 (MQ=255)        tGGCCCCTGCAACAATTTATAAATGGATAGACCTCTACTGTAAAGGGCCATGCTAAAATGTAGGAAACGGGCCATTGAAAATGTAGGTTAACTTTaaaa                                       >  1:999117/1‑99 (MQ=255)        tGGCCCCTGCAACAATTTATAAATGGATAGACCTCTACTGTAAAGGGCCATGCTAAAATGTAGGAAACGGGCCATTGAAAATGTAGGTTAACTTTaaaa                                       >  2:791648/1‑99 (MQ=255)         ggCCCCTGCAACAATTTATAAATGGATAGACCTCTACTGTAAAGGGCCATGCTAAAATGTAGGAAACGGGCCATTGAAAATGTAGGTTAACTTTAAAAt                                      >  2:1044119/1‑99 (MQ=255)          gCCCCTGCAACAATTTATAAATGGATAGACCTCTACTGTAAAGGGCCATGCTAAAATGTAGGAAGCGGGCCATTGAAAATGTAGGTTAACTTTAAAAtt                                     <  2:376132/99‑1 (MQ=255)          gCCCCTGCAACAATTTATAAATGGATAGACCTCTACTGTAAAGGGCCATGCTAAAATGTAGGAAACGGGCCATTGAAAATGTAGGTTAACTTTAAAAtt                                     >  1:773930/1‑99 (MQ=255)          gCCCCTGCAACAATTTATAAATGGATAGACCTCTACTGTAAAGGGCCATGCTAAAATGTAGGAAACGGGCCATTGAAAATGTAGGTTAACTTTAAAAtt                                     >  1:396891/1‑99 (MQ=255)          gCCCCTGCAACAATTTATAAATGGATAGACCTCTACTGTAAAGGGCCATGCTAAAATGTAGGAAACGGGCCATTGAAAATGTAGGTTAACTTTAAAAtt                                     >  1:1020662/1‑99 (MQ=255)           ccccTGCAACAATTTATAAATGGATAGACCTCTACTGTAAAGGGCCATGCTAAAATGTAGGAAACGGGCCATTGAAAATGTAGGTTAACTTTAAAATtg                                    <  2:1019797/99‑1 (MQ=255)             ccTGCAACAATTTATAAATGGATAGACCTCTACTGTAAAGGGCCATGCTAAAATGTAGGAAACGGGCCATTGAAAATGTAGGTTAACTTTAAAATtgtg                                  >  1:1389550/1‑99 (MQ=255)              cTGCAACAATTTATAAATGGATAGACCTCTACTGTAAAGGGCCATGCTAAAATGTAGGAAACGGGCCATTGAAAATGTAGGTTAACTTTAAAATTGTGa                                 >  1:1447316/1‑99 (MQ=255)              cTGCAACAATTTATAAATGGATAGACCTCTACTGTAAAGGGCCATGCTAAAATGTAGGAAACGGGCCATTGAAAATGTAGGTTAACTTTAAAATTGTGa                                 <  2:916404/99‑1 (MQ=255)                   acaaTTTATAAATGGATAGACCTCTACTGTAAAGGGCCATGCTAAAATGTAGGAAACGGGCCATTGAAAATGTAGGTTAACTTTAAAATTGTGATAGGc                            >  2:1033856/1‑99 (MQ=255)                   acaaTTTATAAATGGATAGACCTCTACTGTAAAGGGCCATGCTAAAATGTAGGAAACGGGCCATTGAAAATGTAGGTTAACTTTAAAATTGTGATAGGc                            >  1:736998/1‑99 (MQ=255)                     aagttATAAATGGATAGACCTCTACTGTAAAGGGCCATGCTAAAATGTAGGAAACGGGCCATTGAAAATGTAGGTTAACTTTAAAATTGTGATAGGCtt                          <  1:761244/96‑1 (MQ=255)                      aTTTATAAATGGATAGACCTCTACTGTAAAGGGCCATGCTAAAATGTAGGAAACGGGCCATTGAAAATGTAGGTTAACTTTAAAATTGTGATAGGCttt                         >  2:1104375/1‑99 (MQ=255)                      aTTTATAAATGGATAGACCTCTACTGTAAAGGGCCATGCTAAAATGTAGGAAACGGGCCATTGAAAATGTAGGTTAACTTTAAAATTGTGATAGGCttt                         >  2:1565087/1‑99 (MQ=255)                      aTTTATAAATGGATAGACCTCTACTGTAAAGGGCCATGCTAAAATGTAGGAAACGGGCCATTGAAAATGTAGGTTAACTTTAAAATTGTGATAGGCttt                         >  1:346741/1‑99 (MQ=255)                        ttATAAATGGATAGACCTCTACTGTAAAGGGCCATGCTAAAATGTAGGAAACGGGCCATTGAAAATGTAGGTTAACTTTAAAATTGTGATAGGCTTTTc                       <  1:1149326/99‑1 (MQ=255)                         tataAATGGATAGACCTCTACTGTAAAGGGCCATGCTAAAATGTAGGAAACGGGCCATTGAAAATGTAGGTTAACTTTAAAATTGTGATAGGCTTTTcc                      <  1:513517/99‑1 (MQ=255)                          ataAATGGATAGACCTCTACTGTAAAGGGCCATGCTAAAATGTAGGAAACGGGCCATTGAAAATGTAGGTTAACTTTAAAATTGTGATAGGCTTTTCCt                     <  1:1136101/99‑1 (MQ=255)                          ataAATGGATAGACCTCTACTGTAAAGGGCCATGCTAAAATGTAGGAAACGGGCCATTGAAAATGTAGGTTAACTTTAAAATTGTGATAGGCTTTTCCt                     <  1:979001/99‑1 (MQ=255)                           taAATGGATAGACCTCTACTGTAAAGGGCCATGCTAAAATGTAGGAAACGGGCCATTGAAAATGTAGGTTAACTTTAAAATTGTGATAGGCTTTTCCtt                    <  1:458555/99‑1 (MQ=255)                           taAATGGATAGACCTCTACTGTAAAGGGCCATGCTAAAATGTAGGAAACGGGCCATTGAAAATGTAGGTTAACTTTAAAATTGTGATAGGCTTTTCCtt                    <  2:363326/99‑1 (MQ=255)                            aaaTGGATAGACCTCTACTGTAAAGGGCCATGCTAAAATGTAGGAAACGGGCCATTGAAAATGTAGGTTAACTTTAAAATTGTGATAGGCTTTTCCTTa                   <  1:1404852/99‑1 (MQ=255)                             aaTGGATAGACCTCTACTGTAAAGGGCCATGCTAAAATGTAGGAAACGGGCCATTGAAAATGTAGGTTAACTTTAAAATTGTGATAGGCTTTTCCTTAt                  <  1:801892/99‑1 (MQ=255)                             aaTGGATAGACCTCTACTGTAAAGGGCCATGCTAAAATGTAGGAAACGGGCCATTGAAAATGTAGGTTAACTTTAAAATTGTGATAGGCTTTTCCTTAt                  >  1:551078/1‑99 (MQ=255)                              aTGGATAGACCTCTACTGTAAAGGGCCATGCTAAAATGTAGGAAACGGGCCATTGAAAATGTAGGTTAACTTTAAAATTGTGATAGGCTTTTCCTTATg                 >  2:1341525/1‑99 (MQ=255)                              aTGGATAGACCTCTACTGTAAAGGGCCATGCTAAAATGTAGGAAACGGGCCATTGAAAATGTAGGTTAACTTTAAAATTGTGATAGGCTTTTCCTTATg                 <  2:1464854/99‑1 (MQ=255)                                 gATAGACCGCTACTGTAAAGGGCCAGGCTAAAATGTAGGAAACGGGCCATTGAAAATGTAGGTTAACTTTAAAATTGTGATAGGCTTTTCCTTATgaga              <  2:32266/99‑1 (MQ=255)                                  aTAGACCTCTACTGTAAAGGGCCATGCTAAAATGTAGGAAACGGGCCATTGAAAATGTAGGTTAACTTTAAAATTGTGATAGGCTTTTCCTTATGAGaa             >  2:945643/1‑99 (MQ=255)                                   tAGACCTCTACTGTAAAGGGCCATGCTAAAATGTAGGAAACGGGCCATTGAAAATGTAGGTTAACTTTAAAATTGTGATAGGCTTTTCCTTATGAGaaa            >  1:564005/1‑99 (MQ=255)                                    aGACCTCTACTGTAAAGGGCCATGCTAAAATGTAGGAAACGGGCCATTGAAAATGTAGGTTAACTTTAAAATTGTGATAGGCTTTTCCTTATGAGaaaa           <  2:203222/99‑1 (MQ=40)                                    aGACCTCTACTGTAAAGGGCCATGCTAAAATGTAGGAAACGGGCCATTGAAAATGTAGGTTAACTTTAAAATTGTGATAGGCTTTTCCTTATGAGaaaa           <  1:1180151/99‑1 (MQ=40)                                     gACCTCTACTGTAAAGGGCCATGCTAAAATGTAGGAAACGGGCCATTGAAAATGTAGGTTAACTTTAAAATTGTGATAGGCTTTTCCTTATGAGAAAAg          >  1:168478/1‑99 (MQ=39)                                        ctctACTGTAAAGGGCCATGCTAAAATGTAGGAAACGGGCCATTGAAAATGTAGGTTAACTTTAAAATTGTGATAGGCTTTTCCTTATGAGAAAAGACa       <  1:448268/99‑1 (MQ=35)                                         tctACTGTAAAGGGCCATGCTAAAATGTAGGAAACGGGCCATTGAAAATGTAGGTTAACTTTAAAATTGTGATAGGCTTTTCCTTATGAGAAAAGACAt      >  2:796680/1‑99 (MQ=34)                                          ctACTGTAAAGGGCCATGCTAAAATGTAGGAAACGGGCCATTGAAAATGTAGGTTAACTTTAAAATTGTGATAGGCTTTTCCTTATGAGAAAAGACATc     <  1:1547689/99‑1 (MQ=33)                                          ctACTGTAAAGGGCCATGCTAAAATGTAGGAAACGGGCCATTGAAAATGTAGGTTAACTTTAAAATTGTGATAGGCTTTTCCTTATGAGAAAAGACATc     <  1:1527067/99‑1 (MQ=33)                                           tACTGTAAAGGGCCATGCTAAAATGTAGGAAACGGGCCATTGAAAATGTAGGTTAACTTTAAAATTGTGATAGGCTTTTCCTTATGAGAAAAGACATcc    <  1:1513346/99‑1 (MQ=33)                                             cTGTAAAGGGCCATGCTAAAATGTAGGAAACGGGCCATTGAAAATGTAGGTTAACTTTAAAATTGTGATAGGCTTTTCCTTATGAGAAAAGACATCCTa  >  1:957976/1‑99 (MQ=31)                                             cTGTAAAGGGCCATGCTAAAATGTAGGAAACGGGCCATTGAAAATGTAGGTTAACTTTAAAATTGTGATAGGCTTTTCCTTATGAGAAAAGACATCCTa  >  1:222662/1‑99 (MQ=31)                                                                                                   |                                             TATGACGTGGCCCCTGCAACAATTTATAAATGGATAGACCTCTACTGTAAAGGGCCATGCTAAAATGTAGGAAACGGGCCATTGAAAATGTAGGTTAACTTTAAAATTGTGATAGGCTTTTCCTTATGAGAAAAGACATCCTA  >  CP002094/673507‑673649

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑