New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_017635	= 2314113	13 (0.320)	16 (0.580)	16/68	0.4	52.5%	coding (52/414 nt)	ECW_RS28245	hypothetical protein
	?	NC_017635	= 2315924	20 (0.720)					pseudogene (17/459 nt)	ECW_RS28250	phage tail protein

AACCGGAGATGATGCCAGTTGCCCGTTATCTCTGCATTTTCATAAACGTTGGTTTGGGAGAAG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_017635/2314051‑2314113 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ttggtttgggagaagGTGCTCCAGCTATTGGCGTTCCGTTCTTCTGGCCCTCCGCGGCAATGCC  <  NC_017635/2315924‑2315876                                                                                                                  AACCGGAGATGATGCCAGTTGCCCGTTATCTCTGCATTTTCATAAACGTT                                                                <  2:1844963/50‑1  ACCTGAGATGATGCCAGTTGCCCGTTATCTCTGCATTTTCATAAACGTTG                                                               >  2:83484/1‑50  ACCGGAGATGATGCCAGTTGCCCGTTATCTCTGCATTTTCATAAACGTTG                                                               >  2:1748149/1‑50   CCGGAGATGATGCCAGTTGCCCGTTATCTCTGCATTTTCATAAACGTTGG                                                              <  2:1734368/50‑1   CCGGAGATGATGCCAGTTGCCCGTTATCTCTGCATTTTCATAAACGTTGG                                                              <  1:268285/50‑1     GGAGATGATGCCAGTTGCCCGTTATCTCTGCATTTTCATAAACGTTGGTT                                                            >  2:1101868/1‑50       AGATGATGCCAGTTGCCCGTTATCTCTGCATTTTCATAAACGTTGGTTTG                                                          >  1:51338/1‑50       AGATGATGCCAGTTGCCCGTTATCTCTGCATTTTCATAAACGTTGGTTTG                                                          <  1:1299918/50‑1        GATGATGCCAGTTGCCCGTTATCTCTGCATTTTCATAAACGTTGGTTTGG                                                         <  2:689653/50‑1        GATGATGCCAGTTGCCCGTTATCTCTGCATTTTCATAAACGTTGGTTTGG                                                         >  2:946338/1‑50         ATGATGCCAGTTGCCCGTTATCTCTGCATTTTCATAAACGTTGGTTTGGG                                                        <  2:444899/50‑1         ATGATGCCAGTTGCCCGTTATCTCTGCATTTTCATAAACGTTGGTTTGG                                                         >  2:813476/1‑49         ATGATGCCAGTTGCCCGTTATCTCTGCATTTTCATAAACGTTGGTTTGG                                                         >  1:758682/1‑49           GATGCCAGTTGCCCGTTATCTCTGCATTTTCATAAACGTTGGTTTGG                                                         >  2:1879388/1‑47            ATGCCAGTTGCCCGTTATCTCTGCATTTTCATAAACGTTGGTTTGGGAG                                                      <  2:1340945/49‑1             TGCCAGTTGCCCGTTATCTCTGCATTTTCATAAACGTTGGTTTGGGAG                                                      >  2:1923022/1‑48             TGCCAGTTGCCCGTTATCTCTGCATTTTCATAAACGTTGGTTTGGGAG                                                      >  2:1372158/1‑48              GCCAGTTGCCCGTTATCTCTGCATTTTCATAAACGTTGGTTTGGGAGAAG                                                   >  2:1360973/1‑50                CAGTTGCCCGTTATCTCTGCATTTTCATAAACGTTGGTTTGGGAGAAGGT                                                 <  2:14547/50‑1                 AGTTGCCCGTTATCTCTGCATTTTCATAAACGTTGGTTTGGGAGAAGGTG                                                <  1:444720/50‑1                   TTGCCCGTTATCTCTGCATTTTCATAAACGTTGGTTTGGGAGAAGGTGCT                                              <  2:1662760/50‑1                      CCCGTTATCTCTGCATTTTCATAAACGTTGGTTTGGGAGAAGGTGCTCCA                                           <  1:975435/50‑1                      CCCGTTATCTCTGCATTTTCATAAACGTTGGTTTGGGAGAAGGTGCTCC                                            <  2:1515576/49‑1                       CCGTTATCTCTGCATTTTCATAAACGTTGGTTTGGGAGAAGGTGCTCCAG                                          >  2:488095/1‑50                         GTTATCTCTGCATTTTCATAAACGTTGGTTTGGGAGAAGGTGCTCCAGCT                                        <  1:564272/50‑1                            ATCTCTGCATTTTCATAAACGTTGGTTTGGGAGAAGGTGCTCCAGCTATT                                     >  2:1049632/1‑50                              CTCTGCATTTTCATAAACGTTGGTTTGGGAGAAGGTGCTCCAGCTATTGG                                   >  1:1912886/1‑50                                 TGCATTTTCATAAACGTTGGTTTGGGAGAAGGTGCTCCAGCTATTG                                    <  1:492555/46‑1                                   CATTTTCATAAACGTTGGTTTGGGAGAAGGTGCTCCAGCTATTGGCGTTC                              >  1:754851/1‑50                                         CATAAACGTTGGTTTGGGAGAAGGTGCTCCAGCTATTGGCGTTCCGTTCT                        >  2:1748525/1‑50                                           TAAACGTTGGTTTGGGAGAAGGTGCTCCAGCTATTGGCGTTCCGTTCTTC                      <  2:1465375/50‑1                                             AACGTTGGTTTGGGAGAAGGTGCTCCAGCTATTGGCGTTCCGTTCTTCT                     <  2:711750/49‑1                                               CGTTGGTTTGGGAGAAGGTGCTCCAGCTATTGGCGTTCCGTTCTTCTGGC                  <  1:774519/50‑1                                                GTTGGTTTGGGAGAAGGTGCTCCAGCTATTGGCGTTCCGTTCTTCTGGCC                 <  1:841211/50‑1                                                   GGTTTGGGAGAAGGTGCTCCAGCTATTGGCGTTCCGTTCTTCTGGCCCTC              >  1:229002/1‑50                                                    GTTTGGGAGAAGGTGCTCCAGCTATTGGCGTTCCGTTCTTCTGGCCCTCC             >  2:1426321/1‑50                                                    GTTTGGGAGAAGGTGCTCCAGCTATTGGCGTTCCGTTCTTCTGGCCCTCC             <  2:1967417/50‑1                                                    GTTTGGGAGAAGGTGCTCCAGCTACTGGCGTTCCGTTCTTCTGGCCCTCC             >  1:1787566/1‑50                                                     TTTGGGAGAAGGTGCTCCAGCTATTGGCGTTCCGTTCTTCTGGCCCTCCG            <  1:1643018/50‑1                                                      TTGGGAGAAGGTGCTCCAGCTATTGGCGTTCCGTTCTTCTGGCCCTCCGC           >  2:1808168/1‑50                                                       TGGGAGAAGGTGCTCCAGCTATTGGCGTTCCGTTCTTCTGGCCCTCCGCG          >  2:1640062/1‑50                                                       TGGGAGAAGGTGCTCCAGCTATTGGCGTTCCGTTCTTCTGGCCCTCCGC           <  1:493397/49‑1                                                        GGGAGAAGGTGCTCCAGCTATTGGCGTTCCGTTCTTCTGGCCCTCCGCGG         >  2:1684963/1‑50                                                        GGGAGAAGGTGCTCCAGCTATTGGCGTTCCGTTCTTCTGGCCCTCCGCG          <  2:2060066/49‑1                                                         GGAGAAGGTGCTCCAGCTATTGGCGTTCCGTTCTTCTGGCCCTCCGCGG         >  2:1397658/1‑49                                                          GAGAAGGTGCTCCAGCTATTGGCGTTCCGTTCTTCTGGCCCTCCGCGGC        >  2:1481161/1‑49                                                             AAGGTGCTCCAGCTATTGGCGTTCCGTTCTTCTGGCCCTCCGCGGCAATG    >  2:1577319/1‑50                                                             AAGGTGCTCCAGCTATTGGCGTTCCGTTCTTCTGGCCCTCCGCGGCAATG    >  1:143206/1‑50                                                               GGTGCTCCAGCTATTGGCGTTCCGTTCTTCTGGCCCTCCGCGGCAATGCC  <  2:413255/50‑1                                                                                                                  AACCGGAGATGATGCCAGTTGCCCGTTATCTCTGCATTTTCATAAACGTTGGTTTGGGAGAAG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_017635/2314051‑2314113 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ttggtttgggagaagGTGCTCCAGCTATTGGCGTTCCGTTCTTCTGGCCCTCCGCGGCAATGCC  <  NC_017635/2315924‑2315876

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.