mutation predictions | marginal predictions | summary statistics | genome diff | command line log
|
breseq version 0.35.4 revision f352f80f4bc9
mutation predictions | marginal predictions | summary statistics | genome diff | command line log |
| Predicted mutations | ||||||
|---|---|---|---|---|---|---|
| evidence | position | mutation | freq | annotation | gene | description |
| RA | 117,271 | A→T | 18.0% | intergenic (+51/+43) | PP_0111 → / ← metQ | electron transport protein SCO1/SenC/methionine ABC transporter substrate‑binding protein |
| RA | 195,559 | C→A | 24.2% | T355T (ACC→ACA) | PP_0168 → | putative surface adhesion protein |
| RA | 195,628 | C→T | 7.5% | D378D (GAC→GAT) | PP_0168 → | putative surface adhesion protein |
| RA | 195,629 | A→G | 8.2% | T379A (ACC→GCC) | PP_0168 → | putative surface adhesion protein |
| RA | 195,634 | C→T | 35.1% | T380T (ACC→ACT) | PP_0168 → | putative surface adhesion protein |
| RA | 196,306 | T→C | 12.7% | N604N (AAT→AAC) | PP_0168 → | putative surface adhesion protein |
| RA | 196,327 | A→C | 13.4% | T611T (ACA→ACC) | PP_0168 → | putative surface adhesion protein |
| RA | 196,351 | C→G | 18.2% | T619T (ACC→ACG) | PP_0168 → | putative surface adhesion protein |
| RA | 196,390 | T→C | 19.9% | D632D (GAT→GAC) | PP_0168 → | putative surface adhesion protein |
| RA | 196,795 | G→C | 12.1% | T767T (ACG→ACC) | PP_0168 → | putative surface adhesion protein |
| RA | 196,879 | G→A | 20.4% | V795V (GTG→GTA) | PP_0168 → | putative surface adhesion protein |
| RA | 197,032 | C→T | 5.3% | T846T (ACC→ACT) | PP_0168 → | putative surface adhesion protein |
| RA | 197,089 | T→C | 16.7% | N865N (AAT→AAC) | PP_0168 → | putative surface adhesion protein |
| RA | 197,551 | C→G | 14.4% | T1019T (ACC→ACG) | PP_0168 → | putative surface adhesion protein |
| RA | 197,572 | G→A | 18.4% | K1026K (AAG→AAA) | PP_0168 → | putative surface adhesion protein |
| RA | 197,590 | T→C | 21.1% | D1032D (GAT→GAC) | PP_0168 → | putative surface adhesion protein |
| RA | 197,632 | T→C | 13.5% | T1046T (ACT→ACC) | PP_0168 → | putative surface adhesion protein |
| RA | 278,742:1 | +A | 100% | intergenic (‑237/+77) | PP_0224 ← / ← sctC | DszC family monooxygenase/sulfur compound ABC transporter ATP‑binding protein |
| RA | 307,865:1 | +C | 100% | intergenic (+880/‑989) | hslO → / → PP_0254 | molecular chaperone HslO/hypothetical protein |
| RA | 322,133 | G→A | 6.1% | intergenic (+420/+38) | aguA → / ← PP_0267 | agmatine deiminase/ferric siderophore receptor |
| RA | 322,140 | T→C | 6.0% | intergenic (+427/+31) | aguA → / ← PP_0267 | agmatine deiminase/ferric siderophore receptor |
| RA | 336,124:1 | +T | 100% | coding (209/237 nt) | PP_0278 → | hypothetical protein |
| RA | 353,067 | A→G | 100% | intergenic (+34/+84) | hisF → / ← cbcV | imidazole glycerol phosphate synthase subunit HisF/choline/betaine/carnitine ABC transporter ATP binding protein |
| RA | 427,947 | A→C | 9.7% | intergenic (‑149/+103) | PP_0350 ← / ← PP_0351 | ferrichrome‑iron receptor/transmembrane sensor |
| RA | 499,203 | A→G | 100% | intergenic (+47/‑249) | uhpA → / → PP_0411 | two‑component system response regulator UhpA/polyamine ABC transporter ATP‑binding protein |
| RA | 541,899 | C→G | 91.3% | R47G (CGT→GGT) | rpoC → | DNA‑directed RNA polymerase subunit beta' |
| RA | 549,164 | C→T | 12.6% | L672F (CTC→TTC) | fusA → | elongation factor G 1 |
| RA | 571,617 | G→A | 6.2% | intergenic (+43/+48) | ssb → / ← PP_0486 | single‑stranded DNA‑binding protein/GntR family transcriptional regulator |
| RA | 571,618 | T→C | 6.2% | intergenic (+44/+47) | ssb → / ← PP_0486 | single‑stranded DNA‑binding protein/GntR family transcriptional regulator |
| RA | 697,233 | C→T | 5.5% | intergenic (+160/‑591) | mmsA‑I → / → PP_16SD | methylmalonate‑semialdehyde dehydrogenase/16S ribosomal RNA |
| RA | 699,722 | A→G | 54.9% | intergenic (+115/‑129) | PP_t06 → / → PP_23SD | tRNA‑Ala/23S ribosomal RNA |
| RA | 703,054 | T→A | 5.1% | intergenic (+51/‑208) | PP_5SD → / → PP_0598 | 5S ribosomal RNA/paraquat‑inducible protein A |
| RA | 856,629 | C→G | 23.7% | intergenic (+59/+57) | pagL‑I → / ← PP_0738 | lipid A 3‑O‑deacylase/hypothetical protein |
| RA | 940,280 | T→C | 5.2% | Q1781R (CAA→CGA) | PP_0806 ← | surface adhesion protein |
| RA | 970,644 | T→G | 23.4% | W165G (TGG→GGG) | tgt → | queuine tRNA‑ribosyltransferase |
| RA | 1,012,384 | C→G | 5.2% | L266V (CTC→GTC) | prfC → | peptide chain release factor 3 |
| RA | 1,070,246:1 | +G | 66.7% | intergenic (+46/+96) | aroP‑I → / ← PP_0928 | aromatic amino acid transport protein/K+‑dependent Na+/Ca+ exchanger‑like protein |
| RA | 1,070,246:2 | +A | 66.7% | intergenic (+46/+96) | aroP‑I → / ← PP_0928 | aromatic amino acid transport protein/K+‑dependent Na+/Ca+ exchanger‑like protein |
| RA | 1,070,271 | T→G | 20.2% | intergenic (+71/+71) | aroP‑I → / ← PP_0928 | aromatic amino acid transport protein/K+‑dependent Na+/Ca+ exchanger‑like protein |
| RA | 1,122,055 | G→A | 6.0% | A130T (GCC→ACC) | PP_0983 → | membrane protein |
| RA | 1,126,645:1 | +C | 100% | intergenic (‑99/+50) | tdcG‑II ← / ← gcvP‑I | L‑serine dehydratase/glycine dehydrogenase |
| RA | 1,179,648 | G→A | 6.8% | A377V (GCC→GTC) | PP_1033 ← | sulfatase domain‑containing protein |
| RA | 1,189,035 | A→G | 6.0% | intergenic (+25/+17) | PP_1038 → / ← tatC‑I | hypothetical protein/Sec‑independent protein translocase protein |
| RA | 1,283,459 | T→A | 5.5% | N149Y (AAT→TAT) | PP_1120 ← | hypothetical protein |
| RA | 1,327,121 | C→T | 52.3% | intergenic (+97/‑196) | PP_16SE → / → PP_23SE | 16S ribosomal RNA/23S ribosomal RNA |
| RA | 1,352,151 | A→G | 6.0% | intergenic (‑367/+75) | nrdB ← / ← PP_1178 | ribonucleoside‑diphosphate reductase subunit beta/hypothetical protein |
| RA | 1,361,250 | T→C | 6.0% | F105S (TTC→TCC) | phoP → | two‑component system DNA‑binding transcriptional regulator |
| RA | 1,383,250 | G→C | 33.5% | C17W (TGC→TGG) | PP_1204 ← | lipoprotein |
| RA | 1,383,258 | C→G | 27.8% | A15P (GCA→CCA) | PP_1204 ← | lipoprotein |
| RA | 1,392,915 | T→C | 16.2% | intergenic (+85/‑101) | PP_1214 → / → ruvC | transcriptional regulator/crossover junction endodeoxyribonuclease RuvC |
| RA | 1,392,917 | A→G | 16.2% | intergenic (+87/‑99) | PP_1214 → / → ruvC | transcriptional regulator/crossover junction endodeoxyribonuclease RuvC |
| RA | 1,392,919 | G→A | 16.2% | intergenic (+89/‑97) | PP_1214 → / → ruvC | transcriptional regulator/crossover junction endodeoxyribonuclease RuvC |
| RA | 1,392,921:1 | +A | 15.8% | intergenic (+91/‑95) | PP_1214 → / → ruvC | transcriptional regulator/crossover junction endodeoxyribonuclease RuvC |
| RA | 1,392,927 | C→G | 18.4% | intergenic (+97/‑89) | PP_1214 → / → ruvC | transcriptional regulator/crossover junction endodeoxyribonuclease RuvC |
| RA | 1,392,933 | Δ1 bp | 20.6% | intergenic (+103/‑83) | PP_1214 → / → ruvC | transcriptional regulator/crossover junction endodeoxyribonuclease RuvC |
| RA | 1,392,936 | T→C | 20.6% | intergenic (+106/‑80) | PP_1214 → / → ruvC | transcriptional regulator/crossover junction endodeoxyribonuclease RuvC |
| RA | 1,392,938 | C→T | 18.9% | intergenic (+108/‑78) | PP_1214 → / → ruvC | transcriptional regulator/crossover junction endodeoxyribonuclease RuvC |
| RA | 1,392,940 | G→A | 18.4% | intergenic (+110/‑76) | PP_1214 → / → ruvC | transcriptional regulator/crossover junction endodeoxyribonuclease RuvC |
| RA | 1,419,548:1 | +C | 100% | intergenic (‑37/+99) | PP_1242 ← / ← PP_1244 | hypothetical protein/hypothetical protein |
| RA | 1,464,865 | G→A | 7.4% | S251S (AGC→AGT) | algX ← | alginate biosynthesis protein AlgX |
| RA | 1,499,480 | 2 bp→AC | 100% | intergenic (+57/‑106) | trpS → / → zapE | tryptophan‑‑tRNA ligase/nucleoside triphosphate hydrolase domain‑containing protein |
| RA | 1,499,498 | 1 bp→CG | 100% | intergenic (+75/‑89) | trpS → / → zapE | tryptophan‑‑tRNA ligase/nucleoside triphosphate hydrolase domain‑containing protein |
| RA | 1,499,506:1 | +C | 100% | intergenic (+83/‑81) | trpS → / → zapE | tryptophan‑‑tRNA ligase/nucleoside triphosphate hydrolase domain‑containing protein |
| RA | 1,517,425 | C→A | 12.7% | L205L (CTC→CTA) | murE → | UDP‑N‑acetylmuramoyl‑L‑alanyl‑D‑glutamate‑‑2, 6‑diaminopimelate ligase |
| RA | 1,555,822 | C→T | 11.7% | intergenic (‑9/‑275) | PP_1366 ← / → purU‑II | transcriptional regulator MvaT/formyltetrahydrofolate hydrolase |
| RA | 1,591,987 | T→G | 7.2% | intergenic (‑94/‑109) | PP_1395 ← / → PP_1396 | AraC family transcriptional regulator/hypothetical protein |
| RA | 1,670,003 | C→T | 5.5% | A191V (GCG→GTG) | trmD → | tRNA (guanosine(37)‑N1)‑methyltransferase TrmD |
| RA | 1,679,908 | G→A | 5.8% | A298V (GCC→GTC) | PP_1475 ← | CAIB/BAIF family protein |
| RA | 1,703,248 | A→G | 13.8% | intergenic (+97/‑70) | lysS → / → PP_1497 | lysine‑‑tRNA ligase/TetR family transcriptional regulator |
| RA | 1,703,250 | G→C | 14.3% | intergenic (+99/‑68) | lysS → / → PP_1497 | lysine‑‑tRNA ligase/TetR family transcriptional regulator |
| RA | 1,703,252 | C→T | 15.0% | intergenic (+101/‑66) | lysS → / → PP_1497 | lysine‑‑tRNA ligase/TetR family transcriptional regulator |
| RA | 1,728,836 | G→C | 13.6% | R91G (CGC→GGC) | PP_1523 ← | hypothetical protein |
| RA | 1,842,434 | C→T | 12.0% | W787* (TGG→TAG) | gacS ← | sensor protein GacS |
| RA | 1,842,800 | T→G | 36.1% | Q665P (CAG→CCG) | gacS ← | sensor protein GacS |
| RA | 1,843,946 | C→A | 5.5% | S283I (AGC→ATC) | gacS ← | sensor protein GacS |
| RA | 1,932,638:1 | +C | 100% | intergenic (‑105/+45) | rluA ← / ← minE | bifunctional tRNA pseudouridine(32) synthase TrmQ/ribosomal large subunit pseudouridine synthase RluA/cell division topological specificity factor |
| RA | 1,990,334 | T→A | 6.9% | A528A (GCT→GCA) | PP_1780 → | mannosyltransferase |
| RA | 1,993,604 | A→C | 9.0% | intergenic (+42/+56) | PP_1780 → / ← PP_1781 | mannosyltransferase/acyltransferase |
| RA | 2,017,246 | Δ1 bp | 100% | intergenic (‑854/‑1480) | PP_1795 ← / → PP_1797 | hypothetical protein/HlyD family secretion protein |
| RA | 2,098,614 | T→A | 5.0% | S426C (AGC→TGC) | PP_1875 ← | two‑component system sensor histidine kinase/response regulator |
| RA | 2,101,751 | A→C | 15.0% | L186R (CTG→CGG) | PP_1878 ← | hypothetical protein |
| RA | 2,193,768 | G→A | 6.9% | Q633* (CAG→TAG) | PP_1940 ← | methyl‑accepting chemotaxis transducer |
| RA | 2,282,770 | T→G | 20.3% | intergenic (‑162/+67) | PP_2010 ← / ← PP_2011 | cytochrome b561/hypothetical protein |
| RA | 2,282,774 | G→C | 12.6% | intergenic (‑166/+63) | PP_2010 ← / ← PP_2011 | cytochrome b561/hypothetical protein |
| RA | 2,282,775 | G→C | 12.4% | intergenic (‑167/+62) | PP_2010 ← / ← PP_2011 | cytochrome b561/hypothetical protein |
| RA | 2,282,779 | C→A | 15.5% | intergenic (‑171/+58) | PP_2010 ← / ← PP_2011 | cytochrome b561/hypothetical protein |
| RA | 2,293,130 | A→T | 5.0% | I509F (ATC→TTC) | PP_2019 → | RND family multidrug transporter |
| RA | 2,444,415 | A→C | 5.4% | *159G (TGA→GGA) | sulA ← | cell division inhibitor SulA |
| RA | 2,568,564 | C→T | 6.1% | A328A (GCG→GCA) | PP_2252 ← | hypothetical protein |
| RA | 2,584,610 | G→T | 6.0% | intergenic (+97/+30) | PP_2264 → / ← folD‑II | sugar ABC transporter substrate‑binding protein/bifunctional methylenetetrahydrofolate dehydrogenase/methenyltetrahydrofolate cyclohydrolase |
| RA | 2,584,611 | C→T | 5.8% | intergenic (+98/+29) | PP_2264 → / ← folD‑II | sugar ABC transporter substrate‑binding protein/bifunctional methylenetetrahydrofolate dehydrogenase/methenyltetrahydrofolate cyclohydrolase |
| RA | 2,584,612 | A→G | 5.7% | intergenic (+99/+28) | PP_2264 → / ← folD‑II | sugar ABC transporter substrate‑binding protein/bifunctional methylenetetrahydrofolate dehydrogenase/methenyltetrahydrofolate cyclohydrolase |
| RA | 2,584,613 | A→C | 5.7% | intergenic (+100/+27) | PP_2264 → / ← folD‑II | sugar ABC transporter substrate‑binding protein/bifunctional methylenetetrahydrofolate dehydrogenase/methenyltetrahydrofolate cyclohydrolase |
| RA | 2,639,289 | G→T | 5.8% | R456R (CGC→CGA) | PP_2310 ← | methyl‑accepting chemotaxis transducer |
| RA | 2,690,925 | T→G | 17.2% | L89V (TTG→GTG) | PP_2357 → | type I pili subunit CsuB |
| RA | 2,740,946 | C→G | 5.6% | H1109D (CAC→GAC) | PP_2395 → | leucine‑rich repeat‑containing protein |
| RA | 2,791,336 | C→T | 6.2% | G71D (GGC→GAC) | sstT ← | serine/threonine transporter SstT |
| RA | 2,863,829 | T→G | 24.7% | S297A (TCG→GCG) | gllR → | HTH‑type transcriptional regulator GalR |
| RA | 2,888,514 | A→T | 5.4% | V52E (GTG→GAG) | PP_2542 ← | GntR family transcriptional regulator |
| RA | 2,900,222 | C→T | 5.7% | S136S (TCG→TCA) | PP_2553 ← | MFS transporter |
| JC | 2,957,081 | Δ84 bp | 16.9% | intergenic (+36/‑77) | PP_2588 → / → PP_2589 | class III aminotransferase/aldehyde dehydrogenase family protein |
| RA | 2,958,523 | C→T | 100% | A428V (GCA→GTA) | PP_2589 → | aldehyde dehydrogenase family protein |
| RA | 3,016,440 | G→A | 5.1% | L121L (TTG→TTA) | bcsB → | cellulose synthase and translocator subunit |
| RA | 3,135,309 | G→C | 7.5% | intergenic (+21/‑39) | PP_2751 → / → PP_2752 | hypothetical protein/hypothetical protein |
| RA | 3,234,223 | C→T | 7.4% | L146L (CTG→TTG) | PP_2833 → | LysR family transcriptional regulator |
| RA | 3,313,066 | C→T | 5.9% | G82G (GGC→GGT) | hemB → | 5‑aminolevulinate dehydratase |
| RA | 3,323,600 | C→G | 22.4% | R98P (CGC→CCC) | PP_2923 ← | hypothetical protein |
| RA | 3,323,603 | T→G | 27.7% | D97A (GAC→GCC) | PP_2923 ← | hypothetical protein |
| RA | 3,365,975 | T→C | 7.1% | F215L (TTC→CTC) | PP_2962 → | alcohol dehydrogenase |
| RA | 3,439,546 | C→A | 11.7% | I156I (ATC→ATA) | PP_3059 → | tail sheath protein |
| RA | 3,447,286 | A→C | 28.5% | S18R (AGC→CGC) | PP_5556 → | bacteriophage lysis protein |
| RA | 3,464,652 | T→A | 5.6% | M1M (ATG→TTG) † | ppiC‑II ← | peptidyl‑prolyl cis‑trans isomerase C |
| RA | 3,560,724 | C→T | 5.8% | P160L (CCG→CTG) | tdcG‑III → | L‑serine dehydratase |
| RA | 3,845,703:1 | +G | 100% | intergenic (‑70/+28) | PP_3394 ← / ← PP_3395 | 3‑hydroxy‑3‑methylglutaryl‑CoA lyase/LysR family transcriptional regulator |
| RA | 3,846,515 | T→C | 5.2% | E61G (GAG→GGG) | PP_3395 ← | LysR family transcriptional regulator |
| RA | 3,924,534 | T→C | 5.1% | R94G (AGG→GGG) | peaB ← | quinohemoprotein amine dehydrogenase modification protein |
| RA | 3,951,159 | T→C | 100% | intergenic (‑123/+72) | PP_3486 ← / ← PP_3487 | cytochrome c/hypothetical protein |
| RA | 3,951,161 | A→T | 100% | intergenic (‑125/+70) | PP_3486 ← / ← PP_3487 | cytochrome c/hypothetical protein |
| RA | 3,973,019 | G→C | 14.3% | intergenic (+57/+128) | PP_3502 → / ← PP_3503 | transposase/sigma‑54 dependent transcriptional regulator |
| RA | 3,981,504 | G→A | 5.3% | S66S (AGC→AGT) | cobW ← | adenosylcobalamin biosynthesis protein CobW |
| RA | 4,083,817 | C→T | 10.8% | intergenic (+63/‑42) | PP_3593 → / → PP_3594 | amino acid ABC transporter substrate‑binding protein/amino acid ABC transporter permease |
| RA | 4,141,962 | A→C | 17.6% | Q32P (CAG→CCG) | PP_3646 → | aldehyde dehydrogenase family protein |
| RA | 4,158,466 | T→G | 50.5% | L159R (CTG→CGG) | PP_3661 → | membrane protein |
| RA | 4,158,471 | A→C | 53.1% | S161R (AGC→CGC) | PP_3661 → | membrane protein |
| RA | 4,188,352 | A→C | 5.0% | E83A (GAG→GCG) | PP_3684 → | hypothetical protein |
| RA | 4,252,282 | G→T | 5.4% | P466Q (CCA→CAA) | rocE ← | amino acid permease RocE |
| MC JC | 4,274,119 | 32 bp→45 bp | 100% | intergenic (‑243/‑1) | glcC ← / → glcD | transcriptional regulator GlcC/glycolate oxidase FAD‑linked subunit |
| RA | 4,338,600 | A→T | 21.9% | intergenic (+113/+29) | PP_3812 → / ← PP_5632 | lipase/allo‑isoleucine metabolism protein |
| RA | 4,338,601 | A→T | 16.1% | intergenic (+114/+28) | PP_3812 → / ← PP_5632 | lipase/allo‑isoleucine metabolism protein |
| RA | 4,348,812 | A→G | 54.1% | intergenic (‑70/+404) | PP_3820 ← / ← galU | group II intron‑encoding maturase/UTP‑glucose‑1‑phosphate uridylyltransferase |
| RA | 4,470,052 | C→T | 5.9% | intergenic (‑121/+36) | PP_3960 ← / ← PP_3961 | TetR family transcriptional regulator/transporter |
| RA | 4,503,298 | G→A | 6.5% | V274I (GTC→ATC) | xanP → | xanthine permease |
| RA | 4,586,137 | 2 bp→TC | 100% | intergenic (+113/+101) | PP_4061 → / ← PP_4063 | hypothetical protein/long‑chain fatty acid‑‑CoA ligase |
| RA | 4,586,140:1 | +G | 100% | intergenic (+116/+99) | PP_4061 → / ← PP_4063 | hypothetical protein/long‑chain fatty acid‑‑CoA ligase |
| RA | 4,586,163:1 | +C | 100% | intergenic (+139/+76) | PP_4061 → / ← PP_4063 | hypothetical protein/long‑chain fatty acid‑‑CoA ligase |
| RA | 4,690,605 | C→T | 5.4% | Q460* (CAG→TAG) | yejF → | microcin C ABC transporter ATP‑binding protein |
| RA | 4,740,912 | Δ1 bp | 100% | intergenic (+42/+711) | gltA → / ← yeiW | citrate synthase/putative oxidoreductase |
| RA | 4,740,923 | T→G | 100% | intergenic (+53/+700) | gltA → / ← yeiW | citrate synthase/putative oxidoreductase |
| RA | 4,740,926 | 2 bp→CT | 100% | intergenic (+56/+696) | gltA → / ← yeiW | citrate synthase/putative oxidoreductase |
| RA | 4,741,336 | A→C | 100% | intergenic (+466/+287) | gltA → / ← yeiW | citrate synthase/putative oxidoreductase |
| RA | 4,741,338 | C→G | 100% | intergenic (+468/+285) | gltA → / ← yeiW | citrate synthase/putative oxidoreductase |
| RA | 4,741,341 | C→T | 100% | intergenic (+471/+282) | gltA → / ← yeiW | citrate synthase/putative oxidoreductase |
| RA | 4,741,343 | 2 bp→TG | 100% | intergenic (+473/+279) | gltA → / ← yeiW | citrate synthase/putative oxidoreductase |
| RA | 4,741,346 | A→G | 100% | intergenic (+476/+277) | gltA → / ← yeiW | citrate synthase/putative oxidoreductase |
| RA | 4,741,350 | 3 bp→TGC | 100% | intergenic (+480/+271) | gltA → / ← yeiW | citrate synthase/putative oxidoreductase |
| RA | 4,741,362 | C→T | 100% | intergenic (+492/+261) | gltA → / ← yeiW | citrate synthase/putative oxidoreductase |
| RA | 4,741,364 | A→C | 100% | intergenic (+494/+259) | gltA → / ← yeiW | citrate synthase/putative oxidoreductase |
| RA | 4,741,367 | 2 bp→GC | 100% | intergenic (+497/+255) | gltA → / ← yeiW | citrate synthase/putative oxidoreductase |
| RA | 4,741,370 | A→C | 100% | intergenic (+500/+253) | gltA → / ← yeiW | citrate synthase/putative oxidoreductase |
| RA | 4,741,379 | A→G | 100% | intergenic (+509/+244) | gltA → / ← yeiW | citrate synthase/putative oxidoreductase |
| RA | 4,741,381 | A→C | 100% | intergenic (+511/+242) | gltA → / ← yeiW | citrate synthase/putative oxidoreductase |
| RA | 4,741,383 | G→C | 100% | intergenic (+513/+240) | gltA → / ← yeiW | citrate synthase/putative oxidoreductase |
| RA | 4,741,385 | C→T | 100% | intergenic (+515/+238) | gltA → / ← yeiW | citrate synthase/putative oxidoreductase |
| RA | 4,741,390:1 | +T | 100% | intergenic (+520/+233) | gltA → / ← yeiW | citrate synthase/putative oxidoreductase |
| RA | 4,741,396 | C→G | 100% | intergenic (+526/+227) | gltA → / ← yeiW | citrate synthase/putative oxidoreductase |
| RA | 4,741,399 | C→T | 100% | intergenic (+529/+224) | gltA → / ← yeiW | citrate synthase/putative oxidoreductase |
| RA | 4,741,401 | C→G | 100% | intergenic (+531/+222) | gltA → / ← yeiW | citrate synthase/putative oxidoreductase |
| RA | 4,741,403 | A→C | 100% | intergenic (+533/+220) | gltA → / ← yeiW | citrate synthase/putative oxidoreductase |
| RA | 4,741,405 | C→T | 100% | intergenic (+535/+218) | gltA → / ← yeiW | citrate synthase/putative oxidoreductase |
| RA | 4,767,982 | A→T | 100% | intergenic (+89/‑93) | fpvA → / → tpaK | TonB‑dependent outer membrane ferripyoverdine receptor FpvA/probable terephthalate transporter, MFS superfamily protein |
| RA | 4,767,984 | T→G | 100% | intergenic (+91/‑91) | fpvA → / → tpaK | TonB‑dependent outer membrane ferripyoverdine receptor FpvA/probable terephthalate transporter, MFS superfamily protein |
| RA | 4,768,005 | T→A | 100% | intergenic (+112/‑70) | fpvA → / → tpaK | TonB‑dependent outer membrane ferripyoverdine receptor FpvA/probable terephthalate transporter, MFS superfamily protein |
| RA | 4,852,448 | A→G | 8.6% | K159R (AAG→AGG) | fnrA → | DNA‑binding transcriptional dual regulator |
| RA | 4,854,713 | C→T | 7.5% | intergenic (‑49/+15) | ybaB ← / ← dnaX | nucleoid‑associated broad specificity regulator/DNA polymerase III subunit gamma |
| MC JC | 4,875,480 | Δ756 bp | 100% | coding (1‑756/756 nt) | PP_4283 ← | GntR family transcriptional regulator |
| RA | 4,901,777 | C→T | 7.2% | intergenic (+35/‑463) | PP_4308 → / → PP_4309 | AsnC family transcriptional regulator/NCS1 family transporter |
| RA | 4,919,669 | T→C | 5.0% | V122A (GTC→GCC) | PP_4328 → | hypothetical protein |
| JC | 4,982,288 | +GGC | 100% | intergenic (‑24/+44) | PP_4387 ← / ← flgE | hypothetical protein/flagellar hook protein FlgE |
| RA | 5,011,425 | T→G | 9.9% | intergenic (+82/‑90) | PP_4412 → / → PP_4413 | hypothetical protein/hypothetical protein |
| RA | 5,104,799 | C→G | 12.9% | intergenic (+28/‑162) | phhB → / → PP_5694 | pterin‑4‑alpha‑carbinolamine dehydratase/hypothetical protein |
| RA | 5,108,631 | G→A | 5.7% | T395I (ACC→ATC) | ydiJ ← | putative oxidoreductase |
| RA | 5,123,536 | A→C | 24.2% | L306R (CTG→CGG) | PP_4508 ← | AraC family transcriptional regulator |
| RA | 5,151,571 | A→G | 6.0% | L533P (CTG→CCG) | PP_4535 ← | hypothetical protein |
| RA | 5,183,775 | A→C | 8.7% | intergenic (‑130/+24) | PP_4560 ← / ← csbD | ribonuclease BN/stress response protein |
| RA | 5,198,959 | T→A | 6.0% | E11V (GAA→GTA) | PP_4577 ← | hypothetical protein |
| RA | 5,230,901 | C→G | 9.4% | intergenic (‑140/+36) | PP_4606 ← / ← PP_4607 | ferric siderophore receptor/transmembrane sensor |
| RA | 5,237,012 | T→C | 6.3% | S215P (TCG→CCG) ‡ | fecA → | outer membrane ferric citrate porin |
| RA | 5,237,013 | C→G | 6.1% | S215W (TCG→TGG) ‡ | fecA → | outer membrane ferric citrate porin |
| JC | 5,290,103 | Δ142 bp | 16.3% | [mdaB] | [mdaB] | |
| RA | 5,301,104 | A→C | 20.9% | L234R (CTG→CGG) | recD ← | multifunctional ATP‑dependent DNA helicase/dsDNA/ssDNA exonuclease/ssDNA endonuclease |
| RA | 5,396,064 | A→G | 100% | V231A (GTA→GCA) | tphBII ← | 4‑hydroxythreonine‑4‑phosphate dehydrogenase |
| RA | 5,462,375 | T→G | 33.0% | intergenic (+18/‑22) | PP_4795 → / → holA | lipoprotein/DNA polymerase III subunit delta |
| RA | 5,512,711 | A→C | 41.1% | Q32P (CAG→CCG) | urtB → | urea ABC transporter permease |
| RA | 5,512,720 | T→G | 38.3% | L35R (CTG→CGG) | urtB → | urea ABC transporter permease |
| RA | 5,512,723 | T→G | 28.7% | L36R (CTC→CGC) | urtB → | urea ABC transporter permease |
| RA | 5,526,011 | Δ1 bp | 5.5% | coding (1677/2067 nt) | yhjG ← | protein YhjG |
| RA | 5,553,020 | C→G | 5.5% | T149T (ACC→ACG) | PP_4881 → | iron ABC transporter substrate‑binding protein |
| JC | 5,558,423 | +GCC | 86.0% | intergenic (‑84/+87) | PP_4887 ← / ← PP_4888 | hypothetical protein/methyl‑accepting chemotaxis transducer |
| RA | 5,558,677 | C→G | 5.0% | A590P (GCC→CCC) | PP_4888 ← | methyl‑accepting chemotaxis transducer |
| RA | 5,658,456 | Δ1 bp | 12.5% | intergenic (‑96/+56) | epd ← / ← tktA | D‑erythrose 4‑phosphate dehydrogenase/transketolase A |
| RA | 5,677,565:1 | +G | 100% | intergenic (+112/+28) | rhlE‑II → / ← yceI | ATP‑dependent RNA helicase/polyisoprene‑binding acidic stress response factor |
| RA | 5,677,568 | G→C | 100% | intergenic (+115/+25) | rhlE‑II → / ← yceI | ATP‑dependent RNA helicase/polyisoprene‑binding acidic stress response factor |
| JC | 5,684,230 | +CGGG | 91.9% | intergenic (‑133/+71) | PP_4986 ← / ← PP_4987 | hemolysin III family channel protein/putative Chemotaxis protein |
| RA | 5,699,654 | T→C | 6.2% | V27A (GTG→GCG) | hslV → | ATP‑dependent HslVU protease peptidase subunit |
| RA | 5,750,937 | T→G | 6.5% | intergenic (‑149/+37) | PP_5043 ← / ← typA | PhoPQ‑activated pathogenicity‑like protein/ribosome associated GTPase |
| RA | 5,893,886 | G→A | 5.9% | L183L (CTG→TTG) | plpB ← | NLPA lipoprotein |
| RA | 5,923,038 | A→C | 27.8% | Q270P (CAG→CCG) | PP_5190 → | type II secretion system protein |
| RA | 5,923,041 | A→C | 41.6% | D271A (GAC→GCC) | PP_5190 → | type II secretion system protein |
| RA | 5,991,624 | G→A | 12.7% | intergenic (+103/‑443) | kefB‑III → / → PP_mr64 | glutathione‑regulated potassium/H+ antiporter/C4 ncRNA |
| RA | 5,991,634 | T→C | 13.6% | intergenic (+113/‑433) | kefB‑III → / → PP_mr64 | glutathione‑regulated potassium/H+ antiporter/C4 ncRNA |
| RA | 5,991,639 | C→T | 13.7% | intergenic (+118/‑428) | kefB‑III → / → PP_mr64 | glutathione‑regulated potassium/H+ antiporter/C4 ncRNA |
| RA | 5,991,640 | G→T | 13.7% | intergenic (+119/‑427) | kefB‑III → / → PP_mr64 | glutathione‑regulated potassium/H+ antiporter/C4 ncRNA |
| RA | 5,991,641 | C→T | 13.7% | intergenic (+120/‑426) | kefB‑III → / → PP_mr64 | glutathione‑regulated potassium/H+ antiporter/C4 ncRNA |
| RA | 5,991,644 | A→G | 13.6% | intergenic (+123/‑423) | kefB‑III → / → PP_mr64 | glutathione‑regulated potassium/H+ antiporter/C4 ncRNA |
| RA | 5,991,650 | G→C | 14.3% | intergenic (+129/‑417) | kefB‑III → / → PP_mr64 | glutathione‑regulated potassium/H+ antiporter/C4 ncRNA |
| RA | 5,991,652 | C→G | 14.7% | intergenic (+131/‑415) | kefB‑III → / → PP_mr64 | glutathione‑regulated potassium/H+ antiporter/C4 ncRNA |
| RA | 5,991,655 | C→T | 11.2% | intergenic (+134/‑412) | kefB‑III → / → PP_mr64 | glutathione‑regulated potassium/H+ antiporter/C4 ncRNA |
| RA | 5,991,659 | C→G | 15.6% | intergenic (+138/‑408) | kefB‑III → / → PP_mr64 | glutathione‑regulated potassium/H+ antiporter/C4 ncRNA |
| RA | 5,991,663 | C→T | 18.7% | intergenic (+142/‑404) | kefB‑III → / → PP_mr64 | glutathione‑regulated potassium/H+ antiporter/C4 ncRNA |
| RA | 5,991,665 | C→T | 18.7% | intergenic (+144/‑402) | kefB‑III → / → PP_mr64 | glutathione‑regulated potassium/H+ antiporter/C4 ncRNA |
| RA | 5,991,704 | C→A | 21.6% | intergenic (+183/‑363) | kefB‑III → / → PP_mr64 | glutathione‑regulated potassium/H+ antiporter/C4 ncRNA |
| RA | 5,991,709 | C→T | 25.0% | intergenic (+188/‑358) | kefB‑III → / → PP_mr64 | glutathione‑regulated potassium/H+ antiporter/C4 ncRNA |
| RA | 5,991,710 | A→G | 25.0% | intergenic (+189/‑357) | kefB‑III → / → PP_mr64 | glutathione‑regulated potassium/H+ antiporter/C4 ncRNA |
| RA | 5,991,720 | T→C | 25.3% | intergenic (+199/‑347) | kefB‑III → / → PP_mr64 | glutathione‑regulated potassium/H+ antiporter/C4 ncRNA |
| RA | 5,991,726 | Δ1 bp | 23.8% | intergenic (+205/‑341) | kefB‑III → / → PP_mr64 | glutathione‑regulated potassium/H+ antiporter/C4 ncRNA |
| RA | 5,999,028 | Δ1 bp | 5.1% | coding (819/1983 nt) | PP_5252 ← | hypothetical protein |
| RA | 6,000,004:1 | +G | 13.8% | intergenic (‑158/+42) | PP_5252 ← / ← PP_5253 | hypothetical protein/arylesterase |
| RA | 6,000,009 | Δ1 bp | 14.3% | intergenic (‑163/+37) | PP_5252 ← / ← PP_5253 | hypothetical protein/arylesterase |
| RA | 6,016,700 | T→C | 100% | intergenic (+90/+20) | xpt → / ← PP_5266 | xanthine phosphoribosyltransferase/acetyl‑CoA hydrolase family protein |
| RA | 6,054,485 | T→G | 20.2% | intergenic (+19/‑38) | ridA → / → PP_5304 | aminoacrylate/iminopropionate hydrolase/deaminase/lipoprotein |
| RA | 6,129,762 | T→A | 10.6% | intergenic (+38/+29) | PP_5374 → / ← PP_5375 | choline/carnitine/betaine transporter family protein/LysR family transcriptional regulator |
| RA | 6,164,549 | C→T | 6.3% | H48Y (CAT→TAT) | PP_5403 → | hypothetical protein |
| Unassigned missing coverage evidence | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|
| seq id | start | end | size | ←reads | reads→ | gene | description | |||
| * | * | ÷ | NC_002947_CJ‑RC | 171359–176321 | 176321 | 1–4963 | 36 [35] | [35] 37 | PP_16SA–[PP_5SA] | PP_16SA,PP_23SA,[PP_5SA] |
| * | * | ÷ | NC_002947_CJ‑RC | 176637–181723 | 181723 | 1–5087 | 38 [32] | [35] 36 | PP_16SB–[PP_r01] | PP_16SB,PP_23SB,[PP_r01] |
| Unassigned new junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947_CJ‑RC | = 614297 | 8 (0.110) | 5 (0.090) | 4/210 | NT | 31.1% | intergenic (‑116/+62) | dxs/ispA | 1‑deoxyxylulose‑5‑phosphate synthase/farnesyl diphosphate synthase |
| ? | NC_002947_CJ‑RC | = 614313 | 16 (0.280) | intergenic (‑132/+46) | dxs/ispA | 1‑deoxyxylulose‑5‑phosphate synthase/farnesyl diphosphate synthase | |||||
| * | ? | NC_002947_CJ‑RC | = 652782 | 59 (0.800) | 15 (0.240) | 12/232 | NT | 37.3% | coding (1961/1962 nt) | ctpL | methyl‑accepting chemotaxis protein CtpL |
| ? | NC_002947_CJ‑RC | = 4809862 | 0 (0.000) | intergenic (‑268/‑287) | PP_4234/dsbD‑II | bifunctional aldehyde oxidase/xanthine dehydrogenase/thiol/disulfide interchange protein 2 | |||||
| * | ? | NC_002947_CJ‑RC | = 856605 | 37 (0.500) | 3 (0.040) | 3/248 | NT | 8.1% | intergenic (+35/+81) | pagL‑I/PP_0738 | lipid A 3‑O‑deacylase/hypothetical protein |
| ? | NC_002947_CJ‑RC | = 856639 | 34 (0.510) | intergenic (+69/+47) | pagL‑I/PP_0738 | lipid A 3‑O‑deacylase/hypothetical protein | |||||
| * | ? | NC_002947_CJ‑RC | = 1426808 | NA (NA) | 3 (0.040) | 3/270 | NT | NA | coding (706/1422 nt) | PP_1250 | group II intron‑encoding maturase |
| ? | NC_002947_CJ‑RC | = 1426851 | NA (NA) | coding (749/1422 nt) | PP_1250 | group II intron‑encoding maturase | |||||
| * | ? | NC_002947_CJ‑RC | 1487006 = | 24 (0.330) | 4 (0.070) | 3/212 | NT | 20.1% | intergenic (+22/+108) | yhdZ/degS | amino acid ABC transporter ATP‑binding protein/serine endoprotease DegS |
| ? | NC_002947_CJ‑RC | 1487096 = | 13 (0.230) | intergenic (+112/+18) | yhdZ/degS | amino acid ABC transporter ATP‑binding protein/serine endoprotease DegS | |||||
| * | ? | NC_002947_CJ‑RC | = 1499458 | 10 (0.140) | 5 (0.070) | 4/268 | NT | 27.9% | intergenic (+35/‑129) | trpS/zapE | tryptophan‑‑tRNA ligase/nucleoside triphosphate hydrolase domain‑containing protein |
| ? | NC_002947_CJ‑RC | = 1499495 | 16 (0.220) | intergenic (+72/‑92) | trpS/zapE | tryptophan‑‑tRNA ligase/nucleoside triphosphate hydrolase domain‑containing protein | |||||
| * | ? | NC_002947_CJ‑RC | = 1639564 | 17 (0.230) | 4 (0.060) | 3/234 | NT | 17.2% | intergenic (‑154/‑157) | czcR‑III/PP_1439 | response regulator/hypothetical protein |
| ? | NC_002947_CJ‑RC | = 1639596 | 24 (0.380) | intergenic (‑186/‑125) | czcR‑III/PP_1439 | response regulator/hypothetical protein | |||||
| * | ? | NC_002947_CJ‑RC | 1734813 = | 28 (0.380) | 4 (0.060) | 3/250 | NT | 15.2% | intergenic (+15/+98) | tcdA/PP_1528 | tRNA cyclic N6‑threonylcarbamoyladenosine(37) synthase TcdA/hypothetical protein |
| ? | NC_002947_CJ‑RC | 1734897 = | 19 (0.280) | intergenic (+99/+14) | tcdA/PP_1528 | tRNA cyclic N6‑threonylcarbamoyladenosine(37) synthase TcdA/hypothetical protein | |||||
| * | ? | NC_002947_CJ‑RC | 1844134 = | 4 (0.050) | 43 (0.610) | 37/262 | NT | 54.1% | coding (660/2754 nt) | gacS | sensor protein GacS |
| ? | NC_002947_CJ‑RC | = 2179376 | 69 (0.970) | intergenic (+175/+93) | PP_1931/PP_5486 | hypothetical protein/hypothetical protein | |||||
| * | ? | NC_002947_CJ‑RC | = 1844137 | 3 (0.040) | 66 (0.920) | 55/264 | NT | 59.8% | coding (657/2754 nt) | gacS | sensor protein GacS |
| ? | NC_002947_CJ‑RC | 2177702 = | 86 (1.200) | intergenic (+103/‑63) | PP_5485/PP_1931 | GNAT family acetyltransferase/hypothetical protein | |||||
| * | ? | NC_002947_CJ‑RC | 1909357 = | 76 (1.030) | 4 (0.060) | 4/254 | NT | 5.4% | intergenic (‑107/+114) | PP_1709/PP_1710 | fumarylacetoacetate hydrolase family protein/phthalate permease family MFS transporter |
| ? | NC_002947_CJ‑RC | 1909441 = | 70 (1.020) | intergenic (‑191/+30) | PP_1709/PP_1710 | fumarylacetoacetate hydrolase family protein/phthalate permease family MFS transporter | |||||
| * | ? | NC_002947_CJ‑RC | = 2050595 | 18 (0.240) | 4 (0.070) | 4/198 | NT | 22.2% | intergenic (‑88/+87) | PP_1824/PP_1825 | Smr domain‑containing protein/hypothetical protein |
| ? | NC_002947_CJ‑RC | = 2050631 | 15 (0.280) | intergenic (‑124/+51) | PP_1824/PP_1825 | Smr domain‑containing protein/hypothetical protein | |||||
| * | ? | NC_002947_CJ‑RC | = 2236912 | 38 (0.520) | 4 (0.050) | 3/272 | NT | 10.4% | intergenic (+7/+121) | uvrB/PP_1975 | uvrABC excinuclease protein B/EmrB/QacA family drug resistance transporter |
| ? | NC_002947_CJ‑RC | = 2237015 | 31 (0.420) | intergenic (+110/+18) | uvrB/PP_1975 | uvrABC excinuclease protein B/EmrB/QacA family drug resistance transporter | |||||
| * | ? | NC_002947_CJ‑RC | = 2472115 | 23 (0.310) | 5 (0.070) | 5/258 | NT | 10.8% | intergenic (+19/+130) | PP_2166/PP_2167 | anti‑anti‑sigma factor/PhoD‑like phosphatase |
| ? | NC_002947_CJ‑RC | 2472313 = | 61 (0.870) | coding (1783/1851 nt) | PP_2167 | PhoD‑like phosphatase | |||||
| * | ? | NC_002947_CJ‑RC | = 4026552 | 59 (0.800) | 3 (0.040) | 3/260 | NT | 5.2% | coding (462/633 nt) | PP_3551 | LuxR family transcriptional regulator |
| ? | NC_002947_CJ‑RC | = 4026610 | 53 (0.750) | coding (404/633 nt) | PP_3551 | LuxR family transcriptional regulator | |||||
| * | ? | NC_002947_CJ‑RC | 4647664 = | 32 (0.430) | 3 (0.060) | 3/194 | NT | 17.2% | intergenic (+10/+121) | fusB/PP_4112 | elongation factor G 2/sulfate transporter |
| ? | NC_002947_CJ‑RC | 4647772 = | 6 (0.110) | intergenic (+118/+13) | fusB/PP_4112 | elongation factor G 2/sulfate transporter | |||||
| * | ? | NC_002947_CJ‑RC | 4809877 = | 0 (0.000) | 18 (0.330) | 13/202 | NT | 50.7% | intergenic (‑283/‑272) | PP_4234/dsbD‑II | bifunctional aldehyde oxidase/xanthine dehydrogenase/thiol/disulfide interchange protein 2 |
| ? | NC_002947_CJ‑RC | = 5991750 | 35 (0.640) | intergenic (+229/‑317) | kefB‑III/PP_mr64 | glutathione‑regulated potassium/H+ antiporter/C4 ncRNA | |||||
| * | ? | NC_002947_CJ‑RC | = 4809882 | 1 (0.010) | 4 (0.060) | 4/248 | NT | 14.1% | intergenic (‑288/‑267) | PP_4234/dsbD‑II | bifunctional aldehyde oxidase/xanthine dehydrogenase/thiol/disulfide interchange protein 2 |
| ? | NC_002947_CJ‑RC | 5991580 = | 48 (0.710) | intergenic (+59/‑487) | kefB‑III/PP_mr64 | glutathione‑regulated potassium/H+ antiporter/C4 ncRNA | |||||
| * | ? | NC_002947_CJ‑RC | = 4898101 | 14 (0.190) | 3 (0.050) | 3/230 | NT | 17.7% | intergenic (+31/‑177) | PP_4304/sbp‑I | VIC family cation transporter/sulfate ABC transporter substrate‑binding protein |
| ? | NC_002947_CJ‑RC | = 4898148 | 16 (0.260) | intergenic (+78/‑130) | PP_4304/sbp‑I | VIC family cation transporter/sulfate ABC transporter substrate‑binding protein | |||||
| * | ? | NC_002947_CJ‑RC | 5290097 = | 34 (0.460) | 3 (0.050) | 3/212 | NT | 14.8% | intergenic (‑75/+109) | PP_4660/mdaB | LysR family transcriptional regulator/drug activity modulator B |
| ? | NC_002947_CJ‑RC | 5290191 = | 8 (0.140) | intergenic (‑169/+15) | PP_4660/mdaB | LysR family transcriptional regulator/drug activity modulator B | |||||
| * | ? | NC_002947_CJ‑RC | 5384101 = | 12 (0.160) | 3 (0.050) | 3/202 | NT | 31.7% | intergenic (+18/+115) | smpB/pdhR | SsrA‑binding protein/DNA‑binding transcriptional regulator LldR |
| ? | NC_002947_CJ‑RC | 5384199 = | 4 (0.070) | intergenic (+116/+17) | smpB/pdhR | SsrA‑binding protein/DNA‑binding transcriptional regulator LldR | |||||
| * | ? | NC_002947_CJ‑RC | = 5384135 | 9 (0.120) | 3 (0.050) | 3/202 | NT | 36.0% | intergenic (+52/+81) | smpB/pdhR | SsrA‑binding protein/DNA‑binding transcriptional regulator LldR |
| ? | NC_002947_CJ‑RC | = 5384163 | 4 (0.070) | intergenic (+80/+53) | smpB/pdhR | SsrA‑binding protein/DNA‑binding transcriptional regulator LldR | |||||
| * | ? | NC_002947_CJ‑RC | = 5479945 | 7 (0.090) | 4 (0.080) | 4/190 | NT | 36.5% | intergenic (+43/+69) | PP_4813/PP_4814 | PAP2 family protein/DedA family protein/ATP‑dependent protease La domain‑containing protein |
| ? | NC_002947_CJ‑RC | = 5479962 | 9 (0.170) | intergenic (+60/+52) | PP_4813/PP_4814 | PAP2 family protein/DedA family protein/ATP‑dependent protease La domain‑containing protein | |||||
| * | ? | NC_002947_CJ‑RC | = 5879822 | 34 (0.460) | 3 (0.050) | 3/224 | NT | 10.3% | intergenic (+29/+76) | rpiA/PP_5151 | ribose‑5‑phosphate isomerase A/hypothetical protein |
| ? | NC_002947_CJ‑RC | = 5879856 | 24 (0.400) | intergenic (+63/+42) | rpiA/PP_5151 | ribose‑5‑phosphate isomerase A/hypothetical protein | |||||
| * | ? | NC_002947_CJ‑RC | = 5991572 | 48 (0.650) | 4 (0.060) | 4/256 | NT | 8.2% | intergenic (+51/‑495) | kefB‑III/PP_mr64 | glutathione‑regulated potassium/H+ antiporter/C4 ncRNA |
| ? | NC_002947_CJ‑RC | 5991794 = | 44 (0.630) | intergenic (+273/‑273) | kefB‑III/PP_mr64 | glutathione‑regulated potassium/H+ antiporter/C4 ncRNA | |||||
| * | ? | NC_002947_CJ‑RC | = 5991586 | 46 (0.620) | 5 (0.070) | 4/256 | NT | 10.5% | intergenic (+65/‑481) | kefB‑III/PP_mr64 | glutathione‑regulated potassium/H+ antiporter/C4 ncRNA |
| ? | NC_002947_CJ‑RC | 5991778 = | 42 (0.610) | intergenic (+257/‑289) | kefB‑III/PP_mr64 | glutathione‑regulated potassium/H+ antiporter/C4 ncRNA | |||||
| * | ? | NC_002947_CJ‑RC | = 6022085 | 26 (0.350) | 3 (0.050) | 3/226 | NT | 13.8% | intergenic (‑71/+74) | dadX/dadA‑II | alanine racemase/D‑amino acid:quinone oxidoreductase |
| ? | NC_002947_CJ‑RC | = 6022115 | 16 (0.260) | intergenic (‑101/+44) | dadX/dadA‑II | alanine racemase/D‑amino acid:quinone oxidoreductase | |||||