New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_008463 = 5251483295 (0.590)8 (0.020) 8/206 33.7 3.4% noncoding (78/122 nt) PA14_RS31290 tRNA‑Lys
?NC_008463 5359438 = 249 (0.720)noncoding (31/76 nt) PA14_RS24545 tRNA‑Lys
Rejected: Coverage evenness skew score above cutoff.
Rejected: Frequency below/above cutoff threshold.

Only 100 of 295 total aligned reads displayed.

CTGGAAGAGCGGACCATCCTCCTTCCCACAGGCCAGCATTCGGAAAGTAATGGCACAGAAACGAAAAAGCCCACCTTTGCAGGTGGGCTTTTTCGTCTTGAATATGGTGGGTCGTGTAGGATTCGAACCTACGACCAATTGGTTAAAAGACAACTGGTCGTAGGTTTCTCTAGGAAGGGTTTCCACTCCCGTTACAACGAGTCTGTTTAGCAGCCTCTAATGACCCCACATTAGAGGCTGTAGACATGAATGCGAAAGCGACTTCGGTTGTATCCACCAAGGGTGGTGTAGGAAAATC  >  NC_008463/5251335‑5251632
                                                                                                                                                    |                                                                                                                                                     
cTGGACGAGCGGACCATCCTCCTTCCCACAGGCCAGCATTCGGAAAGTAATGGCACAGAAACGAAAAAGCCCACCTTTGCAGGTGGGCTTTTTCGTCTTGAATATGGTGGGTCGTGTAGGATTCGAACCTACGACCAATTGGTTAAAAGa                                                                                                                                                      >  1:10879807/1‑150 (MQ=255)
cTGGAAGAGCGGACCATCCTCCTTCCCACAGGCCAGCATTCGGAAAGTAATGGCACAGAAACGAAAAAGCCCACCTTTGCAGGTGGGCTTTTTCGTCTTGAATATGGTGGGTCGTGTAGGAGTCGAACCTACGACCAATTGGTTAAAAGa                                                                                                                                                      >  2:1952169/1‑150 (MQ=255)
 aggAAGAGCGGACCATCCTCCTTCCCCCAGGCCAGCATTCGGAAAGTAATGGCACAGAAACGAAAAAGCCCACCTTTGCAGGTGGGCTTTTTCGTCTTGAATATGGTGGGTCGTGTAGGATTCGAACCTACGACCAATTGGGTAAAAGAc                                                                                                                                                     <  2:6200706/149‑1 (MQ=255)
     agagCGGACCATCCTCCTTCCCACAGGCCAGCATTCGGAAAGTAATGGCACAGAAACGAAAAAGCCCACCTTTGCAGGTGGGCTTTTTCGTCTTGAATATGGTGGGTCGTGTAGGATTCGAACCTACGACCAATTGGTTAAAAGACAACt                                                                                                                                                 >  2:8593847/1‑150 (MQ=255)
      gagCGGACCATCCTCCTTCCCACAGGCCAGCATTCGGAAAGTAATGGCACAGAAACGAAAAAGCCCACCTTTGCAGGTGGGCTTTTTCGTCTTGAATATGGTGGGTCGTGTAGGATTCGAACCTACGACCAATTGGTTAAAAGACAACTg                                                                                                                                                <  2:5546711/150‑1 (MQ=255)
            aCCATCCTCCTTCCCACAGGCCAGCATTCGGAAAGTTATGGCTCAGAAACGAAAAAGCCCACCTTTGCAGGTGGGCTTTTTCGTCTTGAATATGGTGGGTCGTGTAGGATTCGAACCTACGACCAATTGGTTAAAAGACAACTGGTCGTa                                                                                                                                          <  2:1596653/150‑1 (MQ=255)
             ccATCCTCCTTCCCACAGGCCAGCATTCGGAAAGTAATGGCACAGAAACGAAAAAGCCCACCTTTGCAGGTGGGCTTTTTCGTCTTGAATATGGTGGGTCGTGTAGGATTCGAACCTACGACCAATTGGTTAAAAGACAACTGGTCGTAg                                                                                                                                         >  1:1975215/1‑150 (MQ=255)
                acctcctTCCCACAGGCCAGCATTCGGAAAGTAATGGCACAGACACGAAAAAGCCCACCTTTGCAGGTGGGCTTTTTCGTCTTGAATATGGTGGGTCGTGTAGGATTCGAACCTACGACCAATTGGTTAAAAGACAACTGGTCGTAGGtt                                                                                                                                      <  1:989292/149‑1 (MQ=255)
                     ctTCCCACAGGCCAGCATTCGGAAAGTAATGGCACAGAAACGAAAAAGCCCACCTTTGCAGGTGGGCTTTTTCGTCTTGAATATGGTGGGTCGTGTAGGAGTCGAACCTACGACCAATTGGTTAAAAGACAACTGGTCGTAGGTTTctct                                                                                                                                 <  2:9518124/150‑1 (MQ=255)
                       tCCCACAGGCCAGCATTCGGAAAGTAATGGCACAGAAACGAAAAAGCCCACCTTTGCAGGTGGGCTTTTTCGTCTTGAATATGGTGGGTCGTGTAGGATTCGAACCTACGACCAATTGGTTAAAAGACAACTGGTCGTAGGTTTCTCTAg                                                                                                                               <  2:6584838/150‑1 (MQ=255)
                       accccCAGGCCAGCATTCGGAAACTTATGGCACAGACACGAAAAAGCCCACCTGTGCAGGTGGTCTTTTTCGTCTTGAATATGGTGGGTCGTGTAGGATTCGAACCTACGACCAATTGGTGAAAAGACAACTGGTCGTAGGTTTCTCTAg                                                                                                                               <  2:7667595/149‑1 (MQ=38)
                             aGGCCAGCATTCGGAAAGTAATGGCACAGAAACGAAAAAGCCCACCTTTGCAGGTGGGCTTTTTCGTCTTGAATATGGTGGGTCGTGTAGGATTCGAACCTACGACCAATTGGTTAAAAGACAACTGGTCGTAGGTTTCTCTAGGAAggg                                                                                                                         >  2:1334586/1‑150 (MQ=255)
                                ccAGCATTCGGAAAGTAATGGCACAGAAACGAAAAAGCCCACCTTTGCAGGTGGGCATTTTCGTCTTGAATATGGTGGGTCGTGTAGGATTCGAACCTACGACCAATTGGTTAAAAGACAACTGGTCGTAGGTTTCTCTAGGAAGGGttt                                                                                                                      <  1:1691509/150‑1 (MQ=255)
                                  aGCATTCGGAAAGTAATGGCACAGACACGAAAAAGCCCACCTTTGCAGGTGGGCTTTTTCGTCTTGAAGATGGTGGGTCGTGTAGGATTCGAACCTACGACCAATTGGATAAAAGACAACTGGTCGTAGGTTTCTCTAGGAAGGGTTTcc                                                                                                                    <  1:869671/150‑1 (MQ=255)
                                  aGCATTCGGAAAGTAATGGCACAGAAACGAAAAAGCCCACCTTTGCAGGTGGGCTTTTTCGTCTTGAATATGGTGGGTCGTGTAGGATTCGAACCTACGTCCAATTGGTTAAAAGACAACTGGTCGTAGGTTTCTCTAGGAAGGGTTTcc                                                                                                                    >  1:8214022/1‑150 (MQ=255)
                                           aaaGTAATGGCACAGAAACGAAAAAGCCCACCTTTGCAGGTGGGCTTTTTCGTCTTGAATATGGTGGGTCGTGTAGGATTCGAACCTACGACCAATTGGTTAAAAGACAACTGGTCGTAGGTTTCTCTAGGAAGGGTTTCCACTCCCGtt                                                                                                           <  1:336218/150‑1 (MQ=255)
                                              gTAATGGCACAGAAACGAAAAAGCCCACCTTTGCAGGTGGGCTTTTTCGTCTTGAATATGGTGGGTCGTGTAGGATTCGAACCTACGACCAATTGGTTAAAAGTCAACTGGTCGTAGGTTTCTCTAGGAAGGGTTTCCACTCCCGTTACa                                                                                                        >  1:5643427/1‑150 (MQ=255)
                                                aaTGGCACAGAAACGACACAGCCCACCTTTGCAGGTGGGCTTTTTCGTCTTGAATATGGTGGGTCGTGTAGGATTCGAACCTACGACCAATTGGTTAAAAGACAACTGGTCGTAGGTTTCTCTAGGAAGGGTTTCCACTCCCGTTACAAc                                                                                                      <  1:2885767/150‑1 (MQ=255)
                                                   ggCACAGAAACGAAAAAGCCCACCTTTGCAGGTGGGCTTTTTCGTCTTGAATATGGTGGGTCGTGTAGGATTCGAACCTACGACCAATTGGTTAAAAGACAACTGGTCGTAGGTTTCTCTAGGAAGGGTTTCCACTCCCGTTACAACGAg                                                                                                   >  1:4827137/1‑150 (MQ=255)
                                                    gCACAGAAACGAAAAAGCCCACCTTTGCAGGTGGGCTTTTTCGTCTTGAATATGGTGGGTCGTGTAGGATTCGATCCTACGACCAAGTGTTTAAAAGACAACTGGTCGTAGGTTTCTCTAGGAAGGGTTTCCACTCCCGGTACAGCGAGt                                                                                                  >  2:7219279/1‑150 (MQ=39)
                                                      ccaGAAACGAAACCGCCCACCGTTGCAGGTGGGCTTTTTCGTCTTGAATAGGGTGGGTCGTGTAGGATTCGACCCTACGACCAATGGGTTAAAAGACAACTGGTCGTAGGTTTCTCTCGGAAGGGTTTCCACTCCCGTTACAACGAGTCt                                                                                                <  2:1736593/149‑1 (MQ=38)
                                                       caGAAACGAAAAAGCCCACCTTTGCAGGTGGGCTGTTTCGTCTTGAATATGGTGGGTCGTGTAGGATTCGAACCTACGACCAATTGGTTAAAAGACAACTGGTCGTAGGTTTCTCTAGGAAGGGTTTCCACTCCCGTTACAACGAGTCTg                                                                                               >  2:3339758/1‑150 (MQ=255)
                                                           aaCGAAACAGCCCACCTTTGCAGGTGGGCTTTTTCGTCTTGAATATGGTGGGTCGTGTAGGATTCGAACCTACGACCAATTGGTTAAAAGACAACTGGTCGTAGGTTTCTCTAGGAAGGGTTTCCACTCCCGTTACAACGAGTCTGTTTa                                                                                           <  2:275386/150‑1 (MQ=255)
                                                           aaCGAAAAAGCCCACCTTTGCAGGTGGGCTTTTTCGTCTTGAATATGGTGGGTCGTGTAGGATTCGAACCTACGACCAATTGGTTAAAAGACAACTGGTCGTAGGTTTCTCTAGGAAGGGTTTCCACTCCCGTTACAACGAGTCTGTTTa                                                                                           <  1:8601863/150‑1 (MQ=255)
                                                           aaCGAAAAAGCCCACCTTTGCAGGTGGGCTTTTTCGTCTTGAATATGGTGGGTCGTGTAGGATTCGAACCTACGACCAATTGGTTAAAAGACAACTGGTCGTAGGTTTCTCTAGGAAGGGTTTCCACTCCCGTTACAACGAGTCTGTTTa                                                                                           >  1:9696923/1‑150 (MQ=255)
                                                               aaaaaGCCCACCTTTGCAGGTGGGCTTTTTCGTCTTGAATATGGTGGGTCGTGTAGGATTCGAACCTACGACCAATTGGTTAAAAGACAACTGGTCGTAGGTTTCTCTAGGAAGGGTTTCCACTCCCGTTACAACGAGTCTGTTTagcag                                                                                       <  1:139460/150‑1 (MQ=255)
                                                                aaaaGCCCACCTTTGCAGGTGGGCTTTTTCGTCTTGAATATGGTGGGTCGTGTAGGATTCGAACCTACGACCAATTGGTTAAAAGACAACTGGTCGTAGGTTTCTCTAGGAAGGGTTTCCACTCCCGTTACAACGAGTCTGTTTagcagc                                                                                      >  1:9221160/1‑150 (MQ=255)
                                                                 aaaGCCCACCTTTGCAGGTGGGCTTTTTCGTCTTGAATATGGTGGGTCGTGTAGGATTCGAACCTACGACCAATTGGTTAAAAGACAACTGGTCGTAGGTTTCTCTAGGAAGGGTTTCCACTCCCGTTACAACGAGTCTGTTTAGCAGcc                                                                                     >  1:2533317/1‑150 (MQ=255)
                                                                   aGCCCACCTTTGCAGGTGGGCTTTTTCGTCTTGAATATGGTGGGTCGTGTAGGATTCGAACCTACGACCAATTGGTTAAAAGACAACTGGTCGTAGGTTTCTCTAGGACGGGTTTCCACTCCCGTTACAACGAGTCTGTTTAGCAGCctc                                                                                   >  2:488225/1‑150 (MQ=255)
                                                                       cACCTTTGCAGGTGGGCTTTTTCGTCTTGAATATGGTGGGTCGTGTAGGATTCGAACCTACGACCAATTGGTTAAAAGACAACTGGTCGTAGGTTTCTCTAGGAAGGGTTTCCACTCCCGTTACAACGAGTCTGTTTAGCAGCCTCTAAt                                                                               >  2:2660215/1‑150 (MQ=255)
                                                                        aCCATTGCAGGTGGGCTATTTCGTCTTGAATATGGTGGGTCGTGTAGGATTCGAACCTACGACCAATGGGTTAAAAGACCACTGGACGTAGGTTTCTCTAGGAAGGGTTTCCACTCCCGTTACAACGCGTCTGTTTAGCAGCCTCTAATg                                                                              <  1:6024530/150‑1 (MQ=38)
                                                                          cTTTGCAGGTGGGCTTTTTCGTCTTGAATATGGTGGGTCGTGTAGGATTCGAACCTACGACCAATTGGTTAAAAGACAACTGGTCGTAGGTTTCTCTAGGAAGGGTTTCCACTCCCGTTACAACGAGTCTGTTTAGCAGCCTCTAATGAc                                                                            >  1:6616548/1‑150 (MQ=255)
                                                                           tttGCAGGTGGGCTTTTTCGTCTTGAATATGGTGGGTCGTGTAGGATTCGAACCTACGACCAATTGGTTAAAAGACAACTGGTCGTAGGTTTCTCTAGGAAGGGTTTCCACTCCCGTTACAACGAGTCTGTTTAGCAGCCTCTAATGAcc                                                                           >  1:6833529/1‑150 (MQ=255)
                                                                            ttGCAGGTGGGCTTTTTCGTCTTGAATATGGTGGGTCGTGTAGGATTCGAACCTACGACCAATTGGTTAAAAGACAACTGGTCGTAGGTTTCTCTAGGAAGGGTTTCCACTCCCGTTACAACGAGTCTGTTTAGCAGCCTCTAATGAccc                                                                          >  2:10552754/1‑150 (MQ=255)
                                                                             tGCAGGTGGGCTTTTTCGTCTTGAATATGGTGGGTCGTGTAGGATTCGAACCTACGACCAATTGGTTAAAAGACAACTGGTCGTAGGTTTCTCTAGGAAGGGTTTCCACTCCCGTTACAACGAGTCTGTTTAGCAGCCTCTAATGAcccc                                                                         >  2:3613964/1‑150 (MQ=255)
                                                                              gCAGGTGGGCTTTTTCGTCTTGAATATGGTGGGTCGTGTAGGATTCGAACCTACGACCAATTGGTTAAAAGACAACTGGTCGTAGGTTTCTCTAGGAAGGGTTTCCACTCCCGTTACAACGAGTCTGTTTAGCAGCCTCTAATGACCCca                                                                        >  1:5932757/1‑150 (MQ=255)
                                                                              gCAGGTGGGCTTTTTCGTCTTGAATATGGTGGGTCGTGTAGGATTCGAACCTACGACCAATTGGTTAAAAGACAACTGGTCGTAGGTTTCTCTAGGAAGGGTTTCCACTCCCGTTACAACGAGTCTGTTTAGCAGCCTCTAATGACCCca                                                                        >  2:5365231/1‑150 (MQ=255)
                                                                               cAGGTGGGCTTTTTCGTCTTGAATATGGTGGGTCGTGTAGGATTCGAACCTACGACCAATTGGTTAAAAGACAACTGGTCGTAGGTTTCTCTAGGAAGGGTTTCCACTCCCGTTACAACGAGTCTGTTTAGCAGCCTCTAATGACCCcac                                                                       >  1:8376099/1‑150 (MQ=255)
                                                                                 ggTGGGCTTTTTCGTCTTGAATATGGTGGGTCGTGTAGGATTCGAACCTACGACCAATTGGTTAAAAGACAACTGGTCGTAGGTTTCTCTAGGAAGGGTTTCCACTCCCGTTACAACGAGTCTGTTTAGCAGCCTCTAATGACCCCACAt                                                                     >  2:5820923/1‑150 (MQ=255)
                                                                                 ggTGGGCTTTTTCGTCTTGAATATGGTGGGTCGTGTAGGATTCGAACCTACGACCAATTGGTTAAAAGACAACTGGTCGTAGGTTTCTCTAGGAAGGGTTTCCACTCCCGTTACAACGAGTCTGTTTAGCAGCCTCTAATGACCCCACAt                                                                     >  2:7307116/1‑150 (MQ=255)
                                                                                 ggTGGGCTTTTTCGTCTTGAATATGGTGGGTCGTGTAGGATTCGAACCTACGACCAATTGGTTAAAAGACAACTGGTCGTAGGTTTCTCTAGGAAGGGTTTCCACTCCCGTTACAACGAGTCTGTTTAGCAGCCTCTAATGACCCCACAt                                                                     >  1:4432237/1‑150 (MQ=255)
                                                                                  gTGGGCTTTTTCGTCTTGAATCTGGTGGGTCGTGTAGGATTCGAACCTACGACCAATTGGGTAAAAGACAACTGGTCGTAGGTTTCTCTAGGAAGGGTTTCCACTCCCGTTACAACGAGTCTGTTTAGCAGCCTCTAATGACCCCACAtt                                                                    <  2:5772172/150‑1 (MQ=255)
                                                                                  gTGGGCTTTTTCGTCTTGAATATGGTGGGTCGTGTAGGATTCGAACCTACGACCAATTGGTTAAAAGACAACTGGTCGTAGGTTTCTCTAGGAAGGGTTTCCACTCCCGTTACAACGAGTCTGTTTAGCAGCCTCTAATGACCCCACAtt                                                                    >  2:3956201/1‑150 (MQ=255)
                                                                                   tGGGCTTTTTCGTCTTGAATATGGTGGGTCGTGTAGGATTCGAACCTACGACCAATTGGTTAAAAGACAACTGGTCGTAGGTTTCTCTAGGAAGGGTTTCCACTCCCGTTACAACGAGTCTGTTTAGCAGCCTCTAATGACCCCACATTa                                                                   <  2:465394/150‑1 (MQ=255)
                                                                                    gggCTTTTTCGTCTTGAATATGGTGGGTCGTGTAGGATTCGAACCTACGACCAATTGGTTAAAAGACAACTGGTCGTAGGTTTCTCTAGGAAGGGTTTCCACTCCCGTTACAACGAGTCTGTTTAGCAGCCTCTAATGACCCCACATTag                                                                  >  2:1540899/1‑150 (MQ=255)
                                                                                    gggCTTTTTCGTCTTGAATATGGTGGGTCGTGTAGGATTCGAACCTACGACCAATTGGTTAAAAGACAACTGGTCGTAGGTTTCTCTAGGAAGGGTTTCCACTCCCGTTACAACGAGTCTGTTTAGCAGCCTCTAATGACCCCACATTag                                                                  >  1:8004729/1‑150 (MQ=255)
                                                                                     ggCTTTTTCGTCTTGAATATGGTGGGTCGTGTAGGATTCGAACCTACGACCAATTGGTTAAACGACAACTGGTCGTAGGTTTCTCTAGGAAGGGTTTCCACTCCCGTTACAACGAGTCTGTTTAGCAGCCTCTAATGACCCCACATTaga                                                                 <  2:9021076/150‑1 (MQ=255)
                                                                                     ggCTTTTTCGTCTTGAATATGGTGGGTCGTGTAGGATTCGAACCTACGACCAATTGGTTAAAAGACAACTGGTCGTAGGTTTCTCTAGGAAGGGTTTCCACTCCCGTTACAACGAGTCTGTTTAGCAGCCTCTAATGACCCCACATTaga                                                                 >  1:9127977/1‑150 (MQ=255)
                                                                                     ggCTTTATCGTCTTGAATATGGTGGGTCGTGGAGGATTCGAACCTACGACCAATTGGTTAAAAGACAACTGGTCGTAGGTTTCTCTAGGAAGGGTTTCCACTCCCGTTACAACGAGTCTGTTTAGCAGCCTCTAATGACCCCACATTaga                                                                 <  2:4639840/150‑1 (MQ=255)
                                                                                          tttCGTCTTGAATATGGTGGGTCGTGTAGGATTCGAACCTACGACCAATTGGTTAAAAGACAACTGGTCGTAGGTTTCTCTAGGAAGGGTTTCCACTCCCGTTACAACGAGTCTGTTTAGCAGCCTCTAATGACCCCACATTAGAGGCTg                                                            >  1:10004555/1‑150 (MQ=255)
                                                                                                 ttGAATATGGTGGGTCGTGTAGGATTCGAACCTACGACCAATTGGTTAAAAGACAACTGGTCGTAGGTTTCTCTAGGAAGGGTTTCCACTCCCGTTACAACGAGTCTGTTTAGCAGCCTCTAATGACCCCACATTAGAGGCTGTAGACAt                                                     >  1:4110236/1‑150 (MQ=255)
                                                                                                 ttGAATATGGTGGGTCGTGTAGGATTCGAACCTACGACCAATTGGTTAAAAGACAACTGGTCGTAGGTTTCTCTAGGAAGGGTTTCCACTCCCGTTACAACGAGTCTGTTTAGCAGCCTCTAATGACCCCACATTAGAGGCTGTAGACAt                                                     >  2:1267731/1‑150 (MQ=255)
                                                                                                  tGAATATGGTGGGTCGTGTAGGATTCGAACCTACGACCAATTGGTTAAAAGACAACTGGTCGTAGGTTTCTCTAGGAAGGGTTTCCACTCCCGTTACAACGAGTCTGTTTAGCAGCCTCTAATGACCCCACATTAGAGGCTGTAGACATg                                                    >  1:9356953/1‑150 (MQ=255)
                                                                                                   gAATATGGTGGGTCGTGTAGGATTCGAACCTACGACCAATTGGTTAAAAGACAACTGGTCGTAGGTTTCTCTAGGAAGGGTTTCCACTCCCGTTACAACGAGTCTGTTTAGCAGCCTCTAATGACCCCACATTAGAGGCTGTAGACATGa                                                   <  1:1886365/150‑1 (MQ=255)
                                                                                                   gAATATGGTGGGTCGTGTAGGATTCGAACCTACGACCAATTGGTTAAAAGACAACTGGTCGTAGGTTTCTCTAGGAAGGGTTTCCACTCCCGTTACAACGAGTCTGTTTAGCAGCCTCTAATGACCCCACATGAGAGGCTGTAGACATGa                                                   >  1:7729509/1‑150 (MQ=255)
                                                                                                    aaTATGGTGGGTCGTGTAGGATTCGAACCTACGACCAATTGGTTAAAAGACAACTGGTCGTAGGTTTCTCTAGGAAGGGTTTCCACTCCCGTTACAACGAGTCTGTTTAGCAGCCTCTAATGACCCCACATTAGAGGCTGTAGACATGaa                                                  <  1:6857911/150‑1 (MQ=255)
                                                                                                    aaTATGGTGGGTCGTGTAGGATTCGAACCTACGACCAATTGCTTAAAAGACAACTGGTCGTAGGATTCTCTAGGAAGTGTTTCCACTCCCGTTACAACGAGTCTGTTTAGCAGCCTCTAATGACCCCACATTAGAGGCTGTAGACATGaa                                                  <  2:6141444/150‑1 (MQ=255)
                                                                                                      tatGGTGGGTCGTGTAGGATTCGAACCTACGACCAATTGGTTAAAAGACAACTGGTCGTAGGTTTCTCTAGGAAGGGTTTCCACTCCCGTTACAACGAGTCTGTTTAGCAGCCTCTAATGACCCCACATTAGAGGCTGTAGACATGAATg                                                >  1:2798870/1‑150 (MQ=255)
                                                                                                       atGGTGGGTCGTGTAGGATTCGAACCTACGACCAATTGGTTAAAAGACAACTGGTCGTAGGTTTCTCTAGGAAGGGTTTCCACTCCCGTTACAACGAGTCTGTTTAGCAGCCTCTAATGACCCCACATTAGAGGCTGTAGACATGAATGc                                               <  2:9597209/150‑1 (MQ=255)
                                                                                                        tggtggGTCGTGTAGGATTCGAACCTACGACCAATTGGTTAAAAGACAACTGGTCGTAGGTTTCTCTAGGAAGGGTTTCCACTCCCGTTACAACGAGTCTGTTTAGCAGCCTCTAATGACCCCACATTAGAGGCTGTAGACATGAATGCg                                              >  2:2396210/1‑150 (MQ=255)
                                                                                                         ggtggGTCGTGTAGGATTCGAACCTACGACCAATTGGTTAAAAGACAACTGGTCGTAGGTTTCTCTAGGAAGGGTTTCCACTCCCGTTACAACGAGTCTGTTTAGCAGCCTCTAATGACCCCACATTAGAGGCTGTAGACATGAATGCGa                                             >  1:5418173/1‑150 (MQ=255)
                                                                                                         ggtggGTCGTGTAGGATTCGAACCTACGACCAATTGGTTAAAAGACAACTGGTCGTAGGTTTCTCTAGGAAGGGTTTCCACTCCCGTTACAACGAGTCTGTTTAGCAGCCTCTAATGACCCCACATTAGAGGCTGTAGACATGAATGCGa                                             >  1:9775343/1‑150 (MQ=255)
                                                                                                             ggTCGTGTAGGATTCGAACCTACGACCAATTGGTTAAAAGACAACTGGTCGTAGGTTTCTCTAGGAAGGGTTTCCACTCCCGTTACAACGAGTCTGTTTAGCAGCCTCTAATGACCCCACATTAGAGGCTGTAGACATGAATGCGAAAGc                                         >  2:8249332/1‑150 (MQ=255)
                                                                                                             ggTCGTGTAGGATTCGAACCTACGACCAATTGGTTAAAAGACAACTGGTCGTAGGTTTCTCTAGGAAGGGTTTCCACTCCCGTTACAACGAGTCTGTTTAGCAGCCTCTAATGACCCCACATTAGAGGCTGTAGACATGAATGCGAAAGc                                         >  1:216972/1‑150 (MQ=255)
                                                                                                              gTCGTGTAGGATTCGAACCTACGACCAATTGGTTAAAAGACAACTGGTCGTAGGTTTCTCTAGGAAGGGTTTCCACTCCCGTTACAACGAGTCTGTTTAGCAGCCTCTAATGACCCCACATTAGAGGCTGTAGACATGAATGCGAAAGCg                                        >  2:7822836/1‑150 (MQ=255)
                                                                                                                  tgtAGGATTCGAACCTACGACCAATTGGTTAAAAGACAACTGGTCGTAGGTTTCTCTAGGAAGGGTTTCCACTCCCGTTACAACGAGTCTGTTTAGCAGCCTCTAATGACCCCACATTAGAGGCTGTAGACATGAATGCGAAAGCGACtt                                    >  1:10624911/1‑150 (MQ=255)
                                                                                                                  tgtAGGATTCGAACCTACGACCAATTGGTTAAAAGACAACTGGTCGTAGGTTTCTCTAGGAAGGGTTTCCACTCCCGTTACAACGAGTCTGTTTAGCAGCCTCTAATGACCCCACATTAGAGGCTGTAGACATGAATGCGAAAGCGACtt                                    >  1:10260365/1‑150 (MQ=255)
                                                                                                                  cgtAGGATTCGAACCTACGACCAATTGGTTAACACACAACTGCTCGTAGGTTTCTCTAGGAAGGGTTTCCACTCCCGTTACAACGAGTCTGTTTAGCAGCCTCTAATGACCCCACATTAGAGGCTGTAGACATGAATGCGAAAGCGACtt                                    <  2:8387419/149‑1 (MQ=255)
                                                                                                                   gtAGGATTCGAACCTACGACCAATTGGTTAAAAGACAACTGGTCGTAGGTTTCTCTAGGAAGGGTTTCCACTCCCGTTACAACGAGTCTGTTTAGCAGCCTCTAATGACCCCACATTAGAGGCTGTAGACATGAATGCGAAAGCGACTTc                                   >  1:7843856/1‑150 (MQ=255)
                                                                                                                   gtAGGATTCGAACCTACGACCAATTGGTTAAAAGACAACTGGTCGTAGGTTTCTCTAGGAAGGGTTTCCACTCCCGTTACAACGAGTCTGTTTAGCAGCCTCTAATGACCCCACATTAGAGGCTGTAGACATGAATGCGAAAGCGACTTc                                   <  2:6806216/150‑1 (MQ=255)
                                                                                                                    tAGGATTCGAACCTACGACCAATTGGTTAAAAGACAACTGGTCGTAGGTTTCTCTAGGAAGGGTTTCCACTCCCGTTACAACGAGTCTGTTTAGCAGCCTCTAATGACCCCACATTAGAGGCTGTAGACATGAATGCGAAAGCGACTTCg                                  >  1:5519069/1‑150 (MQ=255)
                                                                                                                          tCGAACCTACGACCAATTGGTTAAAAGACAACTGGTCGTAGGTTTCTCTAGGAAGGGTTTCCACTCCCGTTACAACGAGTCTGTTTAGCAGCCTCTAATGACCCCACATTAGAGGCTGTAGACATGAATGCGAAAGCGACTTCGGTTGTa                            <  1:3956201/150‑1 (MQ=255)
                                                                                                                            gAACCTACGACCAATTGGTTAAAAGACAACTGGTCGTAGGTTTCTCTAGGAAGGGTTTCCACTCCCGTTACAACGAGTCTGTTTAGCAGCCTCTAATGACCCCACATTAGAGGCTGTAGACATGAATGCGAAAGCGACTTCGGTTGTATc                          >  2:5104795/1‑150 (MQ=255)
                                                                                                                            gAACCTACGACCAATTGGTTAAAAGACAACTGGTCGTAGGTTTCTCTAGGAAGGGTTTCCACTCCCGTTACAACGAGTCTGTTTAGCAGCCTCTAATGACCCCACATTAGAGGCTGTAGACATGAATGCGAAAGCGACTTCGGTTGTATc                          >  1:9063339/1‑150 (MQ=255)
                                                                                                                              aCCTACGACCAATTGGTTAAAAGACAACTGGTCGTAGGTTTCTCTAGGAAGGGTTTCCACTCCCGTTACAACGAGTCTGTTTAGCAGCCTCTAATGACCCCACATTAGAGGCTGTAGACATGAATGCGAAAGCGACTTCGGTTGTATcca                        <  1:5820923/150‑1 (MQ=255)
                                                                                                                              aCCTACGACCAATTGGTTAAAAGACAACTGGTCGTAGGTTTCTCTAGGAAGGGTTTCCACTCCCGTTACAACGAGTCTGTTTAGCAGCCTCTAATGACCCCACAGTAGAGGCTGTAGACATGAATGCGAAAGCGACTTCGGTTGTATcca                        >  2:946155/1‑150 (MQ=255)
                                                                                                                               ccTACGACCAATTGGTTAAAAGACAACTGGTCGTAGGTTTCTCTAGGAAGGGTTTCCACTCCCGTTACAACGAGTCTGTTTAGCAGCCTCTAATGACCCCACATTAGAGGCTGTAGACATGAATGCGAAAGCGACTTCGGTTGTATccac                       <  1:9952603/150‑1 (MQ=255)
                                                                                                                               ccTACGACCAATTGGTTAAAAGACAACTGGTCGTAGGTTTCTCTAGGAAGGGTTTCCACTCCCGTTACAACGAGTCTGTTTAGCAGCCTCTAATGACCCCACATTAGAGGCTGTAGACATGAATGCGAAAGCGACTTCGGTTGTATccac                       <  1:5274522/150‑1 (MQ=255)
                                                                                                                                cTACGACCAATTGGTTAAAAGACAACTGGTCGTAGGTTTCTCTAGGAAGGGTTTCCACTCCCGTTACAACGAGTCTGTTTAGCAGCCTCTAATGACCCCACATTAGAGGCTGTAGACATGAATGCGAAAGCGACTTCGGTTGTATccacc                      >  2:3812766/1‑150 (MQ=255)
                                                                                                                                 tACGACCAATTGGTTAAAAGACAACTGGTCGTAGGTTTCTCTAGGAAGGGTTTCCACTCCCGTTACAACGAGTCTGTTTAGCAGCCTCTAATGACCCCACATTAGAGGCTGTAGACATGAATGCGAAAGCGACATCGGTTGTATccacca                     <  1:1643521/150‑1 (MQ=255)
                                                                                                                                  aCGACCAATTGGTTAAAAGACAACTGGTCGTAGGTTTCTCTAGGAAGGGTTTCCACTCCCGTTACAACGAGTCTGTTTAGCAGCCTCTAATGACCCCACATTAGAGGCTGTAGACATGAATGCGAAAGCGACTTCGGTTGTATCCACCaa                    <  1:2913172/150‑1 (MQ=255)
                                                                                                                                   cgcccAAGTGGTTAAAAGCCACCAGGTCGTAGGATTCTCTAGGCAGGGATTCCCCTCCCGTTACACCGAGTCTGTTTAGCAGCCTCGAATGACCCCACAGTAGAGGCTGTAGACAGGAATGCGAAAGCGCCTTCGGTTGTATCCACCAAg                   <  2:10471893/147‑1 (MQ=255)
                                                                                                                                   cGACCAATTGGTTAAAAGACAACTGGTCGTAGGTTTCTCTAGGAAGGGTTTCCACTCCCGTTACAACGAGTCTGTTTAGCAGCCTCTAATGACCCCACATTAGAGGCTGTAGACATGAATGCGAAAGCGACTTCGGTTGTATCCACCAAg                   >  2:9924275/1‑150 (MQ=255)
                                                                                                                                    gACCAATTGGTTAAAAGACAACTGGTCGTAGGTTTCTCTAGGAAGGGTTTCCACTCCCGTTACAACGAGTCTGTTTAGCAGCCTCTAATGACCCCACATTAGAGGCTGTAGACATGAATGCGAAAGCGACTTCGGTTGTATCCACCAAgg                  >  2:790564/1‑150 (MQ=255)
                                                                                                                                     aCCAATTGGTTAAAAGACAACTGGTCGTAGGTTTCTCTAGGAAGGGTTTCCACTCCCGTTACAACGAGTCTGTTTAGCAGCCTCTAATGACCCCACATTAGAGGCTGTAGACATGAATGCGAAAGCGACTTCGGTTGTATCCACCAAggg                 >  2:6892225/1‑150 (MQ=255)
                                                                                                                                      ccAATTGGTTAAAAGACAACTGGTCGTAGGTTTCTCTAGGAAGGGTTTCCACTCCCGTTACAACGAGTCTGTTTAGCAGCCTCTAATGACCCCACATTAGAGGCTGTAGACATGAATGCGAAAGCGACTTCGGTTGTATCCACCAAGggt                >  1:5007870/1‑150 (MQ=255)
                                                                                                                                       cAATTGGTTAAAAGACAACTGGTCGTAGGTTTCTCTAGGAAGGGTTTCCACTCCCGTTACAACGAGTCTGTTTAGCAGCCTCTAATGACCCCACATTAGAGGCTGTAGACATGAATGCGAAAGCGACTTCGGTTGTATCCACCAAGggtg               >  1:7444235/1‑150 (MQ=255)
                                                                                                                                       cAATTGGTTAAAAGACAACTGGTCGTAGGTTTCTCTAGGAAGGGTTTCCACTCCCGTTACAACGAGTCTGTTTAGCAGCCTCTAATGACCCCACATTAGAGGCTGTAGACATGAATGCGAAAGCGACTTCGGTTGTATCCACCAAGggtg               <  1:703237/150‑1 (MQ=255)
                                                                                                                                       cAATTGGTTAAAAGACAACTGGTCGTAGGTTTCTCTAGGAAGGGTTTCCACTCCCGTTACAACGAGTCTGTTTAGCAGCCTCTAATGACCCCACATTAGAGGCTGTAGACATGAATGCGAAAGCGACTTCGGTTGTATCCACCAAGggtg               >  2:3540801/1‑150 (MQ=255)
                                                                                                                                         aTTGGTTAAAAGACAACTGGTCGTAGGTTTCTCTAGGAAGGGTTTCCACTCCCGTTACAACGAGTCTGTTTAGCAGCCTCTAATGACCCCACATTAGAGGCTGTAGACATGAATGCGAAAGCGACTTCGGTTGTATCCACCAAGggtggt             >  2:10302613/1‑150 (MQ=255)
                                                                                                                                          ttGGTTAAAAGACAACTGGTCGTAGGTTTCTCTAGGAAGGGTTTCCACTCCCGTTACAACGAGTCTGTTTAGCAGCCTCTAATGACCCCACATTAGAGGCTGTAGACATGAATGCGAAAGCGACTTCGGTTGTATCCACCAAGGgtggtg            >  2:287914/1‑150 (MQ=255)
                                                                                                                                            ggTTAAAAGACAACTGGTCGTAGGTTTCTCTAGGAAGGGTTTCCACTCCCGTTACAACGAGTCTGTTTAGCAGCCTCTAATGGCCCCACATTAGAGGCTGTAGACATGAATGCGAAAGCGACTTCGGTTGTATCCACCAAGGGTGGTGTa          >  2:11002430/1‑150 (MQ=255)
                                                                                                                                            ggTTAAAAGACAACTGGTCGTAGGTTTCTCTAGGAAGGGTTTCCACTCCCGTTACAACGAGTCTGTTTAGCAGCCTCTAATGACCCCACATTAGAGGCTGTAGACATGAATGCGAAAGCGACTTCGGTTGTATCCACCAAGGGTGGTGTa          >  1:4249610/1‑150 (MQ=255)
                                                                                                                                              ttAAAAGACAACTGGTCGTAGGTTTCTCTAGGAAGGGTTTCCACTCCCGTTACAACGAGTCTGTTTAGCAGCCTCTAATGACCCCACATTAGAGGCTGTAGACATGAATGCGAAAGCGACTTCGGTTGTATCCACCAAGGGTGGTGTAgg        >  2:1242969/1‑150 (MQ=255)
                                                                                                                                               tAAAAGACAACTGGTCGTAGGTTTCTCTAGGAAGGGTTTCCACTCCCGTTACAACGAGTCTGTTTAGCAGCCTCTAATGACCCCACATTAGAGGCTGTAGACATGAATGCGAAAGCGACTTCGGTTGTATCCACCAAGGGTGGTGTAGGa       <  1:710737/150‑1 (MQ=255)
                                                                                                                                                aaaaGACAACTGGTCGTAGGTTTCTCTAGGAAGGGTTTCCACTCCCGTTACAACGAGTCTGTTTAGCAGCCTCTAATGACCCCACATTAGAGGCTGTAGACATGAATGCGAAAGCGACTTCGGTTGTATCCACCAAGGGTGGTGTAGGaa      >  1:7222575/1‑150 (MQ=255)
                                                                                                                                                  aaGACAACTGGTCGTAGGTTTCTCTAGGAAGGGTTTCCACTCCCGTTACAACGAGTCTGTTTAGCAGCCTCTAATGACCCCACATTAGAGGCTGTAGACATGAATGCGAAAGCGACTTCGGTTGTATCCACCAAGGGTGGTGTAGGaaaa    >  1:1831612/1‑150 (MQ=255)
                                                                                                                                                   aGACAACTGGTCGTAGGTTTCTCTAGGAAGGGTTTCCACTCCCGTTACAACGAGTCTGTTTAGCAGCCTCTAATGACCCCACATTAGAGGCTGTCGACATGAATGCGAAAGCGACTTCGGTTGTATCCACCAAGGGTGGTGTAGGAAAAt   >  2:4612624/1‑150 (MQ=255)
                                                                                                                                                   aGACAACTGGTCGTAGGTTTCTCTAGGAAGGGTTTCCACTCCCGTTACAACGAGTCTGTTTAGCAGCCTCTAATGACCCCACATTAGAGGCTGTAGACATGAATGCGAAAGCGACTTCGGTTGTATCCACTAAGGGTGGTGTAGGAAAAt   <  2:4329007/150‑1 (MQ=255)
                                                                                                                                                    gACAACTGGTCGTAGGTTTCTCTAGGAAGGGTTTCCACTCCCGTTACAACGAGTCTGTTTAGCAGCCTCTAATGACCCCACATTAGAGGCTGTAGACATGAATGCGAAAGCGACTTCGGTTGTATCCACCAAGGGTGGTGTAGGAAAATc  >  2:1014637/1‑150 (MQ=255)
                                                                                                                                                    |                                                                                                                                                     
CTGGAAGAGCGGACCATCCTCCTTCCCACAGGCCAGCATTCGGAAAGTAATGGCACAGAAACGAAAAAGCCCACCTTTGCAGGTGGGCTTTTTCGTCTTGAATATGGTGGGTCGTGTAGGATTCGAACCTACGACCAATTGGTTAAAAGACAACTGGTCGTAGGTTTCTCTAGGAAGGGTTTCCACTCCCGTTACAACGAGTCTGTTTAGCAGCCTCTAATGACCCCACATTAGAGGCTGTAGACATGAATGCGAAAGCGACTTCGGTTGTATCCACCAAGGGTGGTGTAGGAAAATC  >  NC_008463/5251335‑5251632

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.