New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? CP009273 = 3385461293 (1.010)6 (0.030) 4/210 NT 2.7% noncoding (27/308 nt) REP245 (repetitive extragenic palindromic) element; contains 7 REP sequences REP245 (repetitive extragenic palindromic) element; contains 7 REP sequences
?CP009273 3385736 = 218 (0.990)noncoding (302/308 nt) REP245 (repetitive extragenic palindromic) element; contains 7 REP sequences REP245 (repetitive extragenic palindromic) element; contains 7 REP sequences
Rejected: Frequency below/above cutoff threshold.

Only 100 of 312 total aligned reads displayed.

AGACGCACAGCGTCGCATCAGGCAACGGCTGCCGGATGCGGCGTAAACGCCTTATCCGACCTACGGTTATGTTCCGTTTGTAGGCCTGATAAGACGCACAGCGTCGCATCAGGCAACGGCTGCCGGATGCGGCGTGAACGCCCTATCCGACCTACGGTTATGTTCTGGCTCGTTGGCCTTTGGCAACGATTATCCTATGAGATTGGGGCAATTACGCGCCCTCGTCAAATCATTGCGCTTTTTCTTTACGCGGTTGGCGCAACACTTCGTTGATTTGCGGATCGTCCAGCGGACCCG  >  CP009273/3385588‑3385884
                                                                                                                                                    |                                                                                                                                                    
 gACGCACAGCGTCGCATCAGGCAACGGCTGCCGGATGCGGCGTAAACGCCTTATCCGACCTACGGTTATGTTCCGTTTGTAGGCCTGATAAGACGCACAGCGTCGCATCAGGCAACGGCTGCCGGATGCGGCGTGAACGCCCTATCCGa                                                                                                                                                     >  1:968794/1‑149 (MQ=37)
   cGCACAGCGTCGCATCAGGCAACGGCTGCCGGATGCGGCGTAAACGCCTTATCCGACCTACGGTTATGTTCCGTTTGTAGGCCTGATAAGACGCACAGCGTCGCATCAGGCAACGGCTGCCGGATGCGGCGTGAACGCCCTATCCGAcc                                                                                                                                                   >  1:3266204/1‑149 (MQ=37)
     cacaGCGTCGCATCAGGCAACGGCTGCCGGATGCGGCGTAAACGCCTTATCCGACCTACGGTTATGTTCCGTTTGTAGGCCTGATAAGACGCACAGCGTCGCATCAGGCAACGGCTGCCGGATGCGGCGTGAACGCCCTATCCGACCTa                                                                                                                                                 >  2:2086175/1‑149 (MQ=37)
      cccgcggcgCACCAGGCAACGGCTGCCGGATGCGGCGTAAACGCATTAACCGCCCTACGGTTTTGTTCCGTTTGTAGGCCTGATAAGACGCACAGCGTCGCATCAGGCAACGGCTGCCGGATGCGGCGTGAACGCCCTATCCGACCTAc                                                                                                                                                <  2:3014830/146‑1 (MQ=11)
       caGCGTCGCATCAGGCAACGGCTGCCGGATGCGGCGTAAACGCCTTATCCGACCTACGGTTATGTTCCGTTTGTAGGCCTGATAAGACGCACAGCGTCGCATCAGGCACCGGCTGCCGGATGCGGCGTGAACGCCCTATCCGACCTACg                                                                                                                                               >  1:3653937/1‑149 (MQ=37)
        aGCGTCGCATCAGGCAACGGCTGCCGGATGCGGCGTAAACGCCTTATCCGACCTACGGTTATGTTCCGTTTGTAGGCCTGATAAGACGCACAGCGTCGCATCAGGCAACGGCTGCCGGATGCGGCGTGAACGCCCTATCCGACCTACgg                                                                                                                                              >  1:2054440/1‑149 (MQ=37)
         gCGTCGCATCAGGCAACGGCTGCCGGATGCGGCGTAAACGCCTTATCCGACCTACGGTTATGTTCCGTTTGTAGGCCTGATAAGACGCACAGCGTCGCATCAGGCAACGGCTGCCGGATGCGGCGTGAACGCCCTATCCGACCTACggg                                                                                                                                             >  2:3078866/1‑148 (MQ=37)
         gCGTCGCATCAGGCAACGGCTGCCGGATGCGGCGTAAACGCCTTATCCGACCTACGGTTATGTTCCGTTTGTAGGCCTGATAAGACGCACAGCGTCGCATCAGGCAACGGCTGCCGGATGCGGCGTGAACGCCCTATCCGACCTACGGt                                                                                                                                             >  2:3400903/1‑149 (MQ=37)
           gTCGCATCAGGCAACGGCTGCCGGATGCGGCGTAAACGCCTTATCCGACCTACGGTTATGTTCCGTTTGTAGGCCTGATAAGACGCACAGCGTCGCATCAGGCACCGGCTGCCGGATGCGGCGTGAACGCCCTATCCGACCTACGGTTa                                                                                                                                           >  2:4714419/1‑149 (MQ=37)
            tCGCATCAGGCAACGGCTGCCGGATGCGGCGTAAACGCCTTATCCGACCTACGGTTATGTTCCGTTTGTAGGCCTGATAAGACGCACAGCGTCGCATCAGGCAACGGCTGCCGGATGCGGCGTGAACGCCCTATCCGACCTACGGTTAt                                                                                                                                          >  1:4920756/1‑149 (MQ=37)
            tCGCATCAGGCAACGGCTGCCGGATGCGGCGTAAACGCCTTATCCGACCTACGGTTATGTTCCGTTTGTAGGCCTGATAAGACGCACAGCGTCGCATCAGGCAACGGCTGCCGGATGCGGCGTGAACGCCCTATCCGACCTACGGTTAt                                                                                                                                          >  1:3715315/1‑149 (MQ=37)
               aatcattcAACTGCTGACGTATGCGGCTTAAACTCATTATAATACATCCGTTTATGTTCCGTTTGTTGTAATTAAAAGACCAACAGCGTCGAATCAGCCAACGGCTGCCGGATGCGGCGTGAACGCCCTATCCGACCTACGGTTATGtt                                                                                                                                       <  2:2389688/142‑1 (MQ=2)
                aTCAGGCAACGGCTGCCGGATGCGGCGTAAACGCCTTATCCGACCTACGGTTATGTTCCGTTTGTAGGCCTGATAAGACGCACAGCGTCGCATCAGGCAACGGCTGCCGGATGCGGCGTGAACGCCCTATCCGACCTACGGTTATGTTc                                                                                                                                      >  1:451911/1‑149 (MQ=37)
                       acgggCTGCGGTTTGCGGCTTAAACGCCTTATCCGACCTCCGTTTTTTTTCCGTTTGTCGGCATTAAAAGACGCACAGCGTCGCATCTGGCAACGGCTGCCGGATGCGGCGTGAACGCCCTATCCGACCTACGGTTATGTTCTGGCTCg                                                                                                                               <  1:2524074/146‑1 (MQ=14)
                        aCGGCTGCCGGATGCGGCGTAAACGCCTTATCCGACCTACGGTTATGTTCCGTTTGTAGGCCTGATAAGACGCACAGCGTCGCATCAGGCAACGGCTGCCGGATGCGGCGTGAACGCCCTATCCGACCTACGGTTATGTTCTGGCTCGt                                                                                                                              >  1:1874205/1‑149 (MQ=255)
                        aCGGCTGCCGGATGCGGCGTAAACGCCTTATCCGACCTACGGTTATGTTCCGTTTGGAGGCCTGATAAGACGCACAGCGTCGCATCAGGCAACGGCTGCCGGATGCGGCGTGAACGCCCTATCCGACCTACGGGTAGGTTCTGGCTCgg                                                                                                                              >  2:2157929/1‑148 (MQ=255)
                          ggCTGCCGGATGCGGCGTAAACGCCTTATCCGACCTACGGTTATGTTCCGGTTGTAGGCCTGATAAGACGCACAGCGTCGCCTCAGGCACCGGCTGCCGGAGGCGGCGTGAACGCCCGAGCCGACCTCCGGGTCTGGGCTGGCTCGGTg                                                                                                                            >  1:2635209/1‑149 (MQ=14)
                              gCCGGATGCGGCGTAAACGCCTTATCCGACCTACGGTTATGTTCCGTTTGTAGGCCTGATAAGACGCACAGCGTCGCATCAGGCAACGGCTGCCGGATGCGGCGTGAACGCCCTATCCGACCTACGGTTATGTTCTGGCTCGTTGGCCt                                                                                                                        >  2:4486979/1‑149 (MQ=255)
                              gCCGGATGCGGCGTAAACGCCTTATCCGACCTACGGTTATGTTCCGTTTGTAGGCCTGATAAGACGCACAGCGTCGCATCAGGCAACGGCTGCCGGATGCGGCGTGAACGCCCTATCCGACCTACGGTTATGTTCTGGCTCGTTGGCCt                                                                                                                        >  2:1876987/1‑149 (MQ=255)
                                 ggATGCGGCGTAAACGCCTTATCCGACCTACGGTTATGTTCCGTTTGTAGGCCTGATAAGACGCACAGCGTCGCATCAGGCAACGGCTGCCGGATGCGGCGTGAACGCCCTATCCGACCTACGGTTATGTTCTGGCTCGTTGGCCTTTg                                                                                                                     >  2:2324117/1‑149 (MQ=255)
                                          gTAAACGCCTTACCCGCCCTCGGTTTTTGTCCCGTTTGTAGGCCTGATAAGACGCACCGCGTCGCATCAGGCAACGGCTGCCGGATGCGGCGTGAACGCCCTATCCGACCTACGGTTATGTTCTGGCTCGTTGGCCTTTGGCAACGAtt                                                                                                            <  2:2841696/149‑1 (MQ=17)
                                            aaccGCCTTACCCGACCTTGTTTTTTTTTCCGTTTGTTGGCTTTATATGACCCCCCGGGTCGCATCAGCCAACGGCTGCCGGATGCGGCGTGAACGCCCTATCCGACCTACGGTTATGTTCTGGCTCGTTGGCCTTTGGCAACGATTAt                                                                                                          <  1:281098/146‑1 (MQ=17)
                                               cGCCTTATCCGACCTACGGTTATGTTCCGTTTGTAGGCCTGATAAGACGCACAGCGTCGCATCAGGCAACGGCTGCCGGATGCGGCGTGAACGCCCTATCCGACCTACGGTTATGTTCTGGCTCGTTGGCCTTTGGCAACGATTATCCt                                                                                                       >  1:302717/1‑149 (MQ=255)
                                               cGCCTTATCCGACCTACGGTTATGTTCCGTTTGTAGGCCTGATAAGACGCACAGCGTCGCATCAGGCAACGGCTGCCGGATGCGGCGTGAACGCCCTATCCGACCTACGGTTATGTTCTGGCTCGTTGGCCTTTGGCAACGATTATCCt                                                                                                       >  2:2808459/1‑149 (MQ=255)
                                                  cTTATCCGACCTACGGTTATGTTCCGTTTGTAGGCCTGATAAGACGCACAGCGTCGCATCAGGCAACGGCTGCCGGATGCGGCGTGAACGCCCTATCCGACCTACGGTTATGTTCTGGCTCGTTGGCCTTTGGCAACGATTATCCTATg                                                                                                    >  1:4549791/1‑149 (MQ=255)
                                                      tCCGACCTACGGTTATGTTCCGTTTGTAGGCCTGATAAGACGCACAGCGTCGCATCAGGCAACGGCTGCCGGATGCGGCGTGAACGCCCTATCCGACCTACGGTTATGTTCTGGCTCGTTGGCCTTTGGCAACGATTATCCTATGAGAt                                                                                                >  1:2372074/1‑149 (MQ=255)
                                                        cGACCTACGGTTATGTTCCGTTTGTAGGCCTGATAAGACGCACAGCGTCGCATCAGGCAACGGCTGCCGGATGCGGCGTGAACGCCCTATCCGACCTACGGTTATGTTCTGGCTCGTTGGCCTTTGGCAACGATTATCCTATGAGATTg                                                                                              >  2:2628544/1‑149 (MQ=255)
                                                         gACCTACGGTTATGTTCCGTTTGTAGGCCTGATAAGACGCACAGCGTCGCATCAGGCAACGGCTGCCGGATGCGGCGTGAACGCCCTATCCGACCTACGGTTATGTTCTGGCTCGTTGGCCTTTGGCAACGATTATCCTATGAGATTgg                                                                                             >  2:4893400/1‑149 (MQ=255)
                                                              cgggTTATGTTCCGTTTTTTGGCCTGATAAGACCCACCGGGTCGCATCTGGCCACGGCTGCCGGATGCGGCGTGAACGCCCTATCCGACCTACGGTTATGTTCTGGCTCGTTGGCCTTTGGCAACGATTATCCTATGAGATTGGGGCaa                                                                                        <  2:4479564/147‑1 (MQ=21)
                                                               cgtttttGTTCCGTTTGTGGGCCTGATAAGACTCACCGCGTCGCATCAGGCAACGGCTGCCGGATGCGGCGTGAACGCCCTATCCGACCTACGGTTATGTTCTGGCTCGTTGGCCTTTGGCAACGATTATCCTATGAGATTGGGGCAAt                                                                                       <  2:3591026/143‑1 (MQ=21)
                                                                gttttggTTCGGTTTGTTGGCCTGATAAGACGCACCGGGGCGCATCTGGCAACGGCTGCCGGATGCGGCGTGAACGCCCTATCCGACCTACGGTTATGTTCTGGCTCGTTGGCCTTTGGCAACGATTATCCTATGAGATTGGGGCAAtt                                                                                      <  1:4708179/143‑1 (MQ=21)
                                                                ggTTATGTTCCGTTTGTAGGCCTGATAAGACGCACAGCGTCGCATCAGGCAACGGCTGCCGGATGCGGCGTGAACGCCCTATCCGACCTACGGTTATGTTCTGGCTCGTTGGCCTTTGGCAACGATTATCCTATGAGATTGGGGCAAtt                                                                                      >  2:5033081/1‑149 (MQ=255)
                                                                ggTTATGTTCCGTTTGTAGGCCTGATAAGACGCACAGCGTCGCATCAGGCAACGGCTGCCGGATGCGGCGTGAACGCCCTATCCGACCTACGGTTATGTTCTGGCTCGTTGGCCTTTGGCAACGATTATCCTATGAGATTGGGGCAAtt                                                                                      >  2:710710/1‑149 (MQ=255)
                                                                 gTTTTGTTCGTTTTGTCGGCCTGATAAGACGCACCGCGTCGCTTCAGGCAACGGCTGCCGGATGCGGCGTGAACGCCCTATCCGACCTACGGTTATGTTCTGGCTCGTTGGCCTTTGGCAACGATTATCCTATGAGATTGGGGCAATTa                                                                                     <  2:808957/149‑1 (MQ=21)
                                                                 gTTATGTTCCGTTTGTAGGCCTGATAAGACGCACAGCGTCGCATCAGGCAACGGCTGCCGGATGCGGCGTGAACGCCCTATCCGACCTACGGTTATGTTCTGGCTCGTTGGCCTTTGGCAACGATTATCCTATGAGATTGGGGCAATTa                                                                                     >  1:4547284/1‑149 (MQ=255)
                                                                 gTTATGTTCCGTTTGTAGGCCTGATAAGACGCACAGCGTCGCATCAGGCAACGGCTGCCGGATGCGGCGTGAACGCCCTATCCGACCTACGGTTATGTTCTGGCTCGTTGGCCTTTGGCAACGATTATCCTATGAGATTGGGGCAATTa                                                                                     >  2:584989/1‑149 (MQ=255)
                                                                  ttATGTTCCGTTTGTAGGCCTGATAAGACGCACAGCGTCGCATCAGGCAACGGCTGCCGGATGCGGCGTGAACGCCCTATCCGACCTACGGTTATGTTCTGGCTCGTTGGCCTTTGGCAACGATTATCCTATGAGATTGGGGCAATTAc                                                                                    >  1:479098/1‑149 (MQ=255)
                                                                   tATGTTCCGTTTGTAGGCCTGATAAGACGCACAGCGTCGCATCAGGCAACGGCTGCCGGATGCGGCGTGAACGCCCTATCCGACCTACGGTTATGTTCTGGCTCGTTGGCCTTTGGCAACGATTATCCTATGAGATTGGGGCAATTAcg                                                                                   >  1:5156024/1‑149 (MQ=255)
                                                                        tCCGTTTGTAGGCCTGATAAGACGCACAGCGTCGCATCAGGCAACGGCTGCCGGATGCGGCGTGAACGCCCTATCCGACCTACGGTTATGTTCTGGCTCGTTGGCCTTTGGCAACGATTATCCTATGAGATTGGGGCAAGTACGCGccc                                                                              >  2:4347410/1‑149 (MQ=255)
                                                                         cggTTTGTCGGCCTTATACGCCGCCCCGCGTCGCATCTGGCCACGGCTGCCGGATGCGGCGTGAACGCCCTATCCGACCTACGGTTATGTTCTGGCTCGTTGGCCTTTGGCAACGATTATCCTATGAGATTGGGGCAATTACGCGCCCt                                                                             <  2:1735781/147‑1 (MQ=25)
                                                                         ccGTTTGTTGGCCTGATAAGACGCACCGCGCCGCAACAGCCAACGGCTGCCGGATGCGGCGTGAACGCCCTATCCGACCTACGGTTATGTTCTGGCTCGTTGGCCTTTGGCAACGATTATCCTATGAGATTGGGGCAATTACGCGCCCt                                                                             <  1:4719937/149‑1 (MQ=25)
                                                                           gTTTGTAGGCCTGATAAGACGCACAGCGTCGCATCAGGCAACGGCTGCCGGATGCGGCGTGAACGCCCTATCCGACCTACGGTTATGTTCTGGCTCGTTGGCCTTTGGCAACGATTATCCTATGAGATTGGGGCAATTACGCGCCCTCg                                                                           >  2:4753224/1‑149 (MQ=255)
                                                                           gTTTGTAGGCCTGATAAGACGCACAGCGTCGCATCAGGCAACGGCTGCCGGATGCGGCGTGAACGCCCTATCCGACCTACGGTTATGTTCTGGCTCGTTGGCCTTTGGCAACGATTATCCTATGAGATTGGGGCAATTACGCGCCCTCg                                                                           >  2:3299472/1‑149 (MQ=255)
                                                                            tttGTAGGCCTGATAAGACGCACAGCGTCGCATCAGGCAACGGCTGCCGGATGCGGCGTGAACGCCCTATCCGACCTACGGTTATGTTCTGGCTCGTTGGCCTTTGGCAACGATTATCCTATGAGATTGGGGCAATTACGCGCCCTCGt                                                                          >  2:4406311/1‑149 (MQ=255)
                                                                             ttGTCGGCCTTATAAGACCCACCGCGTCGCCACAGGCAACGGCTGCCGGATGCGGCGTGAACGCCCTATCCGACCTACGGTTATGTTCTGGCTCGTTGGCCTTTGGCAACGATTATCCTATGAGATTGGGGCAATTACGCGCCCTCGTc                                                                         <  1:844741/149‑1 (MQ=25)
                                                                             ttGTAGGCCTGATAAGACGCACAGCGTCGCATCAGGCAACGGCTGCCGGATGCGGCGTGAACGCCCTATCCGACCTACGGTTATGTTCTGGCTCGTTGGCCTTTGGCAACGATTATCCTATGAGATTGGGGCAATTACGCGCCCTCGTc                                                                         <  2:3567059/149‑1 (MQ=255)
                                                                                tcggCCTCATAAGCCGCCCCGCGTCGCATCCCCCAACGGCTGCCGGATGCGGCGTGAACGCCCTATCCGACCTACGGTTATGTTCTGGCTCGTTGGCCTTTGGCAACGATTATCCTATGAGATTGGGGCAATTACGCGCCCTCGTCaaa                                                                      <  1:2893750/147‑1 (MQ=37)
                                                                                tAGGCCTGATAAGACGCACAGCGTCGCATCAGGCAACGGCTGCCGGATGCGGCGTGAACGCCCTATCCGACCTACGGTTATGTTCTGGCTCGTTGGCCTTTGGCAACGATTATCCTATGAGATTGGGGCAATTACGCGCCCTCGTCaaa                                                                      >  1:3315633/1‑149 (MQ=255)
                                                                                 aGGCCTTATAAGACGCACAGCGTCGCATCAGGCAACGGCTGCCGGATGCGGCGTGAACGCCCTATCCGACCTACGGTTATGTTCTGGCTCGTTGGCCTTTGGCAACGATTATCCTATGAGATTGGGGCAATTACGCGCCCTCGTCAAAt                                                                     <  1:767035/149‑1 (MQ=255)
                                                                                 aGGCCTGATAAGACGCACAGCGTCGCATCAGGCAACGGCTGCCGGATGCGGCGTGAACGCCCTATCCGACCTACGGTTATGTTCTGGCTCGTTGGCCTTTGGCAACGATTATCCTATGAGATTGGGGCAATTACGCGCCCTCGTCAAAt                                                                     >  2:144894/1‑149 (MQ=255)
                                                                                  ggCCTGATAAGACGCACAGCGTCGCATCAGGCAACGGCTGCCGGATGCGGCGTGAACGCCCTATCCGACCTACGGTTATGTTCTGGCTCGTTGGCCTTTGGCAACGATTATCCTATGAGATTGGGGCAATTACGCGCCCTCGTCAAATc                                                                    >  1:1422524/1‑149 (MQ=255)
                                                                                    ccTGATAAGACGCACGGCGTCGCATCTGGCCACGGCTGCCGGATGCGGCGTGAACGCCCTATCCGACCTACGGTTATGTTCTGGCTCGTTGGCCTTTGGCAACGATTATCCTATGAGATTGGGGCAATTACGCGCCCTCGTCAAATCAt                                                                  <  2:3499137/149‑1 (MQ=255)
                                                                                    acTGATCAGACGCCCCGCGTCCCATCAGGCAACGGCTGCCGGATGCGGCGTGAACGCCCTATCCGACCTACGGTTATGTTCTGGCTCGTTGGCCTTTGGCAACGATTATCCTATGAGATTGGGGCAATTACGCGCCCTCGTCAAATCAt                                                                  <  2:673149/148‑1 (MQ=255)
                                                                                      tGATAAGACGCACAGCGTCGCATCAGGCAACGGCTGCCGGATGCGGCGTGAACGCCCTATCCGACCTACGGTTATGTTCTGGCTCGTTGGCCTTTGGCAACGATTATCCTATGAGATTGGGGCAATTACGCGCCCTCGTCAAATCATTg                                                                >  1:3478435/1‑149 (MQ=255)
                                                                                       gATAAGACGCACAGCGTCGCATCAGGCAACGGCTGCCGGATGCGGCGTGAACGCCCTATCCGACCTACGGTTATGTTCTGGCTCGTTGGCCTTTGGCAACGATTATCCTATGAGATTGGGGCAATTACGCGCCCTCGTCAAATCATTgc                                                               >  1:103907/1‑149 (MQ=255)
                                                                                          aaGACGCACCGCGGCGCAAACGGCAACGGCTGCCGGATGCGGCGTGAACGCCCTATCCGACCTACGGTTATGTTCTGGCTCGTTGGCCTTTGGCAACGATTATCCTATGAGATTGGGGCAATTACGCGCCCTCGTCAAATCATTGCGCt                                                            <  1:2725284/149‑1 (MQ=38)
                                                                                           aGACGCACAGCGTCGCATCAGGCAACGGCTGCCGGATGCGGCGTGAACGCCCTATCCGACCTACGGTTATGTTCTGGCTCGTTGGCCTTTGGCAACGATTATCCTATGAGATTGGGGCAATTACGCGCCCTCGTCAAATCATTGCGCtt                                                           >  2:1203868/1‑149 (MQ=255)
                                                                                            gACGCCCAGCGTCGCATCAGGCAACGGCTGCCGGATGCGGCGTGAACGCCCTATCCGACCTACGGTTATGTTCTGGCTCGTTGGCCTTTGGCAACGATTATCCTATGAGATTGGGGCAATTACGCGCCCTCGTCAAATCATTGCGCttt                                                          <  2:1537782/149‑1 (MQ=255)
                                                                                            gACGCACCGCGTCTCTACTGGCAACGGCTGCCGGATGCGGCGTGAACGCCCTATCCGACCTACGGTTATGTTCTGGCTCGTTGGCCTTTGGCAACGATTATCCTATGAGATTGGGGCAATTACGCGCCCTCGTCAAATCATTGCGCttt                                                          <  2:4887867/149‑1 (MQ=38)
                                                                                            gACGCACCGCGTCGCAACCGGCAACGGCTGCCGGATGCGGCGTGAACGCCCTATCCGACCTACGGTTATGTTCTGGCTCGTTGGCCTTTGGCAACGATTATCCTATGAGATTGGGGCAATTACGCGCCCTCGTCAAATCATTGCGCttt                                                          <  2:2307191/149‑1 (MQ=255)
                                                                                             aCGCACAGCGGCGCATCAGGCAACGGCTGCCGGATGCGGCGTGAACGCCCTATCCGACCTACGGTTATGTTCTGGCTCGTTGGCCTTTGGCAACGATTATCCTATGAGATTGGGGCAATTACGCGCCCTCGTCAAATCATTGCGCtttt                                                         <  2:4209428/149‑1 (MQ=255)
                                                                                               gCACCGCGTCGCATCCGCCCACGGCTGCCGGATGCGGCGTGAACGCCCGATCCGACCTACGGTTATGTTCTGGCTCGTTGGCCTTTGGCAACGATTATCCTATGAGATTGGGGCAATTACGCGCCCTCGTCAAATCATTGCGCTTTTTc                                                       <  1:1356341/149‑1 (MQ=38)
                                                                                               gCACAGCGTCGCATCTGGCAACGGCTGCCGGATGCGGCGTGAACGCCCTATCCGACCTACGGTTATGTTCTGGCTCGTTGGCCTTTGGCAACGATTATCCTATGAGATTGGGGCAATTACGCGCCCTCGTCAAATCATTGCGCTTTTTc                                                       <  2:3877530/149‑1 (MQ=255)
                                                                                               gCACAGCGTCGCATCAGGCAACGGCTGCCGGATGCGGCGTGAACGCCCTATCCGACCTACGGTTATGTTCTGGCTCGTTGGCCTTTGGCAACGATTATCCTATGAGATTGGGGCAATTACGCGCCCTCGTCAAATCATTGCGCTTTTTc                                                       >  1:4208794/1‑149 (MQ=255)
                                                                                                 acaGCGTCGCATCAGGCAACGGCTGCCGGATGCGGCGTGAACGCCCTATCCGACCTACGGTTATGTTCTGGCTCGTTGGCCTTTGGCAACGATTATCCTATGAGATTGGGGCAATTACGCGCCCTCGTCAAATCATTGCGCTTTTTCtt                                                     >  2:627276/1‑149 (MQ=255)
                                                                                                   aGCGTCGCATCAGGCAACGGCTGCCGGATGCGGCGTGAACGCCCTATCCGACCTACGGTTATGTTCTGGCTCGTTGGCCTTTGGCAACGATTATCCTATGAGATTGGGGCAATTACGCGCCCTCGTCAAATCATTGCGCTTTTTCTTTa                                                   <  1:3131176/149‑1 (MQ=255)
                                                                                                   aGCGTCGCATCAGGCAACGGCTGCCGGATGCGGCGTGAACGCCCTATCCGACCTACGGTTATGTTCTGGCTCGTTGGCCTTTGGCAACGATTATCCTATGAGATTGGGGCAATTACGCGCCCTCGTCAAATCATTGCGCTTTTTCTTTa                                                   <  1:1713256/149‑1 (MQ=255)
                                                                                                      gTCGCATCTGGCAACGGCTGCCGGATGCGGCGTGAACGCCCTATCCGACCTACGGTTATGTTCTGGCTCGTTGGCCTTTGGCAACGATTATCCTATGAGATTGGGGCAATTACGCGCCCTCGTCAAATCATTGCGCTTTTTCTTTAcgc                                                <  2:3584692/149‑1 (MQ=255)
                                                                                                      gTCGCATCAGGCAACGGCTGCCGGATGCGGCGTGAACGCCCTATCCGACCTACGGTTATGTTCTGGCTCGTTGGCCTTTGGCAACGATTATCCTATGAGATTGGGGCAATTACGCGCCCTCGTCAAATCATTGCGCTTTTTCTTTAcgc                                                >  2:862327/1‑149 (MQ=255)
                                                                                                      gTCGCATCAGGCAACGGCTGCCGGATGCGGCGTGAACGCCCTATCCGACCTACGGTTATGTTCTGGCTCGTTGGCCTTTGGCAACGATTATCCTATGAGATTGGGGCAATTACGCGCCCTCGTCAAATCATTGCGCTTTTTCTTTAcgc                                                >  2:4868910/1‑149 (MQ=255)
                                                                                                       tCGCATCAGGCAACGGCTGCCGGATGCGGCGTGAACGCCCTATCCGACCTACGGTTATGTTCTGGCTCGTTGGCCTTTGGCAACGATTATCCTATGAGATTGGGGCAATTACGCGCCCTCGTCAAATCATTGCGCTTTTTCTTTAcgcg                                               >  1:1365360/1‑149 (MQ=255)
                                                                                                           aTCAGGCAACGGCTGCCGGATGCGGCGTGAACGCCCTATCCGACCTACGGTTATGTTCTGGCTCGTTGGCCTTTGGCAACGATTATCCTATGAGATTGGGGCAATTACGCGCCCTCGTCAAATCATTGCGCTTTTTCTTTACGCGGTTg                                           >  1:4933423/1‑149 (MQ=255)
                                                                                                            actgtctacggctgccggatgcggcgtgaacgccctatccCTCCTACGGTTATGTTCTGGCTCGTTGGCCTTTGGCAACGATTATCCTATGAGATTGGGGCAATTACGCGCCCTCGTCAAATCATTGCGCTTTTTCTTTACGCGGTTgg                                          <  2:4646414‑M2/109‑1 (MQ=255)
                                                                                                             ccggacacggctgccggatgcggcgtgaacgccctatccGACCTACGGTTATGTTCTGGCTCGTTGGCCTTTGGCAACGATTATCCTATGAGATTGGGGCAATTACGCGCCCTCGTCAAATCATTGCGCTTTTTCTTTACGCGGTTGgc                                         <  1:3999257‑M2/110‑1 (MQ=255)
                                                                                                                  cacggctgccggatgcggcgtgaacgccctatccGACCTACGGTTATGTTCTGGCTCGTTGGCCTTTGGCAACGATTATCCTATGAGATTGGGGCAATTACGCGCCCTCGTCAAATCATTGCGCTTTTTCTTTACGCGGTTGGCGCAac                                    <  2:2885716‑M2/115‑1 (MQ=255)
                                                                                                                  aaCGGCTGCCGGATGCGGCGTGAACGCCCTATCCGACCTACGGTTATGTTCTGGCTCGTTGGCCTTTGGCAACGATTATCCTATGAGATTGGGGCAATTACGCGCCCTCGTCAAATCATTGCGCTTTTTCTTTACGCGGTTGGCGCAac                                    <  1:1210066/149‑1 (MQ=255)
                                                                                                                   acggctgccggatgcggcgtgaacgccctatccGACCTACGGTTATGTTCTGGCTCGTTGGCCTTTGGCAACGATTATCCTATGAGATTGGGGCAATTACGCGCCCTCGTCAAATCATTGCGCTTTTTCTTTACGCGGTTGGCGCAaca                                   >  2:3481976‑M2/34‑149 (MQ=255)
                                                                                                                     ggctgccggatgcggcgtgaacgccctatccGACCTACGGTTATGTTCTGGCTCGTTGGCCTTTGGCAACGATTATCCTATGAGATTGGGGCAATTACGCGCCCTCGTCAAATCATTGCGCTTTTTCTTTACGCGGTTGGCGCAACACt                                 <  1:2204851‑M2/118‑1 (MQ=255)
                                                                                                                     ggctgccggatgcggcgtgaacgccctatccGACCTACGGTTATGTTCTGGCTCGTTGGCCTTTGGCAACGATTATCCTATGAGATTGGGGCAATTACGCGCCCTCGTCAAATCATTGCGCTTTTTCTTTACGCGGTTGGCGCAACACt                                 <  2:1112518‑M2/118‑1 (MQ=255)
                                                                                                                     ggctgccggatgcggcgtgaacgccctatccGACCTACGGTTATGTTCTGGCTCGTTGGCCTTTGGCAACGATTATCCTATGAGATTGGGGCAATTACGCGCCCTCGTCAAATCATTGCGCTTTTTCTTTACGCGGTTGGCGCAACACt                                 <  1:3951701‑M2/118‑1 (MQ=255)
                                                                                                                      gctgccggatgcggcgtgaacgccctatccGACCTACGGTTATGTTCTGGCTCGTTGGCCTTTGGCAACGATTATCCTATGAGATTGGGGCAATTACGCGCCCTCGTCAAATCATTGCGCTTTTTCTTTACGCGGTTGGCGCAACACtt                                >  2:380832‑M2/31‑149 (MQ=255)
                                                                                                                      gctgccggatgcggcgtgaacgccctatccGACCTACGGTTATGTTCTGGCTCGTTGGCCTTTGGCAACGATTATCCTATGAGATTGGGGCAATTACGCGCCCTCGTCAAATCATTGCGCTTTTTCTTTACGCGGTTGGCGCAACACtt                                >  1:1586798‑M2/31‑149 (MQ=255)
                                                                                                                      gctgccggatgcggcgtgaacgccctatccGACCTACGGTTATGTTCTGGCTCGTTGGCCTTTGGCAACGATTATCCTATGAGATTGGGGCAATTACGCGCCCTCGTCAAATCATTGCGCTTTTTCTTTACGCGGTTGGCGCAACACtt                                >  2:5016190‑M2/31‑149 (MQ=255)
                                                                                                                        tgccggatgcggcgtgaacgccctatccGACCTACGGTTATGTTCTGGCTCGTTGGCCTTTGGCAACGATTATCCTATg                                                                                                    <  2:5111926‑M2/51‑1 (MQ=255)
                                                                                                                           cggatgcggcgtgaacgccctatccGACCTACGGTTCTGTTCTGGCTCGTTGGCCTTTGGCAACGATTATCCTATGAGATTGGGGCAATTACGCGCCCTCGTCAAATCATTGCGCTTTTTCTTTACGCGGTTGGCGCAACACTTCGTTg                           >  2:2600907‑M2/26‑149 (MQ=255)
                                                                                                                            ggatgcggcgtgaacgccctatccGACCTACGGTTATGTTCTGGCTCGTTGGCCTTTGGCAACGATTATCCTATGAGATTGGGGCAATTACGCGCCCTCGTCAAATCATTGCGCTTTTTCTTTACGCGGTTGGCGCAACACTTCGTTGa                          >  2:3432665‑M2/25‑149 (MQ=255)
                                                                                                                            ggatgcggcgtgaacgccctatccGACCTACGGTTATGTTCTGGCTCGTTGGCCTTTGGCAACGATTATCCTATGAGATTGGGGCAATTACGCGCCCTCGTCAAATCATTGCGCTTTTTCTTTACGCGGTTGGCGCAACACTTCGTTGa                          <  1:2120785‑M2/125‑1 (MQ=255)
                                                                                                                             gatgcggcgtgaacgccctatccGACCTACGGTTATGTTCTGGCTCGTTGGCCTTTGGCAACGATTATCCTATGAGATTGGGGCAATTACGCGCCCTCGTCAAATCATTGCGCTTTTTCTTTACGCGGTTGGCGCAACACTTCGTTGAt                         >  2:653985‑M2/24‑149 (MQ=255)
                                                                                                                              atgcggcgtgaacgccctatccGACCTACGGTTATGTTCTGGCTCGTTGGCCTTTGGCAACGATTATCCTATGAGATTGGGGCAATTACGCGCCCTCGTCAAATCATTGCGCTTTTTCTTTACGCGGTTGGCGCAACACTTCGTTGAtt                        <  2:4549791‑M2/127‑1 (MQ=255)
                                                                                                                               tgcggcgttaacgccctatccGACCTACGGTGATGTTCTGGCTCGTTGGCCTTTGGCAACGATTATCCTATGAGATTGGGGCAATTACGCGCCCTCGTCAAATCATTGCGCTTTTTCTTTACGCGGTTGGCGCAACACTTCGTTGAttt                       <  2:312455‑M2/128‑1 (MQ=255)
                                                                                                                               tgcggcgtgaacgccctatccGACCTACGGTTATGTTCTGGCTCGTTGGCCTTTGGCAACGATTATCCTATGAGATTGGGGCAATTACGCGCCCTCGTCAAATCATTGCGCTTTTTCTTTACGCGGTTGGCGCAACACTTCGTTGAttt                       <  1:661535‑M2/128‑1 (MQ=255)
                                                                                                                                 cggcgtgaacgccctatccGACCTACGGTTATGTTCTGGCTCGTTGGCCTTTGGCAACGATTATCCTATGAGATTGGGGCAATTACGCGCCCTCGTCAAATCATTGCGCTTTTTCTTTACGCGGTTGGCGCAACACTTCGTTGATTTGc                     <  1:3400903‑M2/130‑1 (MQ=255)
                                                                                                                                  ggcgtgaacgccctatccGACCTACGGTTATGTTCTGGCTCGTTGGCCTTTGGCAACGATTATCCTATGAGATTGGGGCAATTACGCGCCCTCGTCAAATCATTGCGCTTTTTCTTTACGCGGTTGGCGCAACACTTCGTTGATTTGCg                    <  2:1589758‑M2/131‑1 (MQ=255)
                                                                                                                                      tgaacgccctatccGACCTACGGTTATGTTCTGGCTCGTTGGCCTTTGGCAACGATTATCCTATGAGATTGGGGCAATTACGCGCCCTCGTCAAATCATTGCGCTTTTTCTTTACGCGGTTGGCGCAACACTTCGTTGATTTGCGGATc                >  2:4311601‑M2/15‑149 (MQ=255)
                                                                                                                                        aacgccctatccGACCTACGGTTATGTTCTGGCTCGTTGGCCTTTGGCAACGATTATCCGATGAGATTGGGGCAATTACGCGCCCTCGTCAAATCATTGCGCTTTTTCTTTACGCGGTTGGCGCAACACTTCGTTGATTTGCGGATCGt              <  2:3160505‑M2/137‑1 (MQ=255)
                                                                                                                                            ccctatccGACCTACGGTTATGTTCTGGCTCGTTGGCCTTTGGCAACGATTATCCTATGAGATTGGGGCAATTACGCGCCCTCGTCAAATCATTGCGCTTTTTCTTTACGCGGTTGGCGCAACACTTCGTTGATTTGCGGATCGTCCAg          <  1:937736‑M2/141‑1 (MQ=255)
                                                                                                                                                 tCCGACCTACGGTTATGTTCAGGCTCTTTGCCCGATGGCAACGATTAACGGAAGAGAGTCGGGCAATTACGCGCCCTCGTCAAAACCTTTATCATTAACTATAATCTGTTGGCTCTAAACTACTTTTATTTGCGAATCGTCCacaagat     >  2:937365/1‑143 (MQ=255)
                                                                                                                                                  ccGACCTACGGTTATGTTCTGGCTCGTTGGCCTTTGGCAACGATTATCCTATGAGATTGGGGCAATTACGCGCCCTCGTCAAATCATTGCGCTTTTTCTTTACGCGGTTGGCGCAACACTTCGTTGATTTGCGGATCGTCCAGCGGAcc    >  2:4792348‑M2/3‑149 (MQ=255)
                                                                                                                                                    gACCTACGGTTATGTTCTGGCTCGTTGGCCTTTGGCAACGATTATCCTATGAGATTGGGGCAATTACGCGCCCTCGTCAAATCATTGCGCTTTTTCTTTACGCGGTTGGCGCAACACTTCGTTGATTTGCGGATCGTCCAGCGGACCCg  <  1:5089706/149‑1 (MQ=255)
                                                                                                                                                    gACCTACGGTTATGTTCTGGCTCGTTGGCCTTTGGCAACGATTATCCTATGAGATTGGGGCAATTACGCGCCCTCGTCAAATCATTGCGCTTTTTCTTTACGCGGTTGGCGCAACACTTCGTTGATTTGCGGATCGTCCAGCGGACCCg  >  1:43401/1‑149 (MQ=255)
                                                                                                                                                    |                                                                                                                                                    
AGACGCACAGCGTCGCATCAGGCAACGGCTGCCGGATGCGGCGTAAACGCCTTATCCGACCTACGGTTATGTTCCGTTTGTAGGCCTGATAAGACGCACAGCGTCGCATCAGGCAACGGCTGCCGGATGCGGCGTGAACGCCCTATCCGACCTACGGTTATGTTCTGGCTCGTTGGCCTTTGGCAACGATTATCCTATGAGATTGGGGCAATTACGCGCCCTCGTCAAATCATTGCGCTTTTTCTTTACGCGGTTGGCGCAACACTTCGTTGATTTGCGGATCGTCCAGCGGACCCG  >  CP009273/3385588‑3385884

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.