| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | CP009273 | 777247 = | 153 (0.610) | 6 (0.040) | 6/180 | NT | 4.8% | intergenic (+139/‑294) | lysQ/nadA | tRNA‑Lys/quinolinate synthase, subunit A |
| ? | CP009273 | = 2514669 | 137 (0.840) | noncoding (397/1345 nt) | IS186 | repeat region | |||||
| Rejected: Frequency below/above cutoff threshold. | |||||||||||
Only 100 of 287 total aligned reads displayed.
CGACCCACCAATGTAAAAAAGCGCCCTAAAGGCGCTTTTTTGCTATCTGCGATACTCAAAGATTCGAACCTGCAGCAGGTTTG‑AGTTGAGCGCAGCGAAACAACGGAGCCGCTCGCGGCGACGGCCCGAAGGGCGAGCGAAGCGAGTCATCCTGCACGACCCACCAATGTAAAAAAGCGCCCTAAAGGCGCTTTTTTGCTATTCAGGCATCCTCAATTTCACTTTGTAAACCTGATGACATCGTCAGAGCTTACTGTGCAAGCAACTCTATGTCGGTGGAATTAGGCGTAAAATGACG > CP009273/777099‑777396 | cGACCCACCAATGTAAAAAAGCGCCCTAAAGGCGCTTTTTTGCTATCTGCGATACTCAATGATTCGAACCTGCAGCAGTTTTG‑TGTTGAGCGCAGCGAAACAACGGAGCCGCTCGCGGCGACGGCCCGAAGGGCGAGCGAAGCGAGTCAt < 2:4354867/150‑1 (MQ=12) ccgaagggggtgattagctcagctgggagagcacctcccttacaaggagggggtcggcggttcgatcccgtcatcacccaccacttcgggtcgttagctcagttggtagagcagttgacttttaatcaattggtcgcaggttcgaATCCt > 1:2696309‑M1/146‑150 (MQ=255) ccaccaATGTAAAAAAGCGCCCTAAAGGCGCTTTTTTGCTATCTGCGATACTCAAAGATTCGAACCTGCAGCAGGTTTG‑AGTTGAGCGCAGCGAAACAACGGAGCCGCTCGCGGCGACGGCCCGAAGGGCGAGCGAAGCGAGTCATccgg > 1:825486/1‑148 (MQ=17) ccaccaATGTAAAAAAGCGCCCTAAAGGCGCTTTTTTGCTATCTGCGATACTCAAAGATTCGAACCTGCAGCAGGTTTG‑AGTTGAGCGCAGCGAAACAACGGAGCCGCTCGCGGCGACGGCCCGAAGGGCGAGCGAAGCGAGTCATCCTg > 1:691178/1‑150 (MQ=32) cgaagtgggtgattagctcagctgggagagcacctcccttacaaggagggggtcggcggttcgatcccgtcatcacccaccacttcgggtcgttagctcagttggtagagcagttgacttttaatcaattggtcgcaggttcgaATCCTg < 2:3873040‑M1/6‑1 (MQ=255) caccaATGTAAAAAAGCGCCCTAAAGGCGCTTTTTTGCTATCTGCGATACTCAAAGATTCGAACCTGCAGCAGGTTTG‑AGTTGAGCGCAGCGAAACAACGGAGCCGCTCGCGGCGACGGCCCGAAGGGCGAGCGACGCGAGTCATCCTGc > 1:220693/1‑150 (MQ=17) cagtgggtgattagctcagctgggagagcacctcccttacaaggagggggtcggcggttcgatcccgtcatcacccaccacttcgggtcgttagctcagttggtagagcagttgacttttaatcaattggtcgcaggttcgaATCCTGCa > 1:120621‑M1/143‑150 (MQ=255) caATGTAAAAAAGCGCCCTAAAGGCGCTTTTTTGCTATCTGCGATACTCAAAGATTCGAACCTGCAGCAGGTTTG‑AGTTGAGCGCAGCGAAACAACGGAGCCGCTCGCGGCGACGGCCCGAAGGGCGAGCGAAGCGAGTCATCCTGCACg > 1:2814177/1‑150 (MQ=32) caATGTAAAAAAGCGCCCGAAAGGCGCTGTTTTGCTATCTGCGCTACGCCAAGATTCGAACCTGCAGCAGGTGTG‑AGTTGAGCGCAGCGAAACCACGGCGCCGCTCGCGGCGACGGCCCGAAGGGCGAGCGACGCGAGGCATCCTGCACg > 2:2342027/1‑150 (MQ=11) aTGTAAAAAAGCGCCCTAAAGGCGCTTTTTTGCTATCTGCGATACTCAAAGATTCGAACCTGCAGCAGGTTTG‑AGTTGAGCGCAGCGAAACAACGGAGCCGCTCGCGGCGACGGCCCGAAGGGCGAGCGAAGCGAGTCATCCTGCACGAc > 2:2760799/1‑150 (MQ=32) ggtgattagctcagctgggagagcacctcccttacaaggagggggtcggcggttcgatcccgtcatcacccaccacttcgggtcgttagctcagttggtagagcagttgacttttaatcaattggtcgcaggttcgaATCCTGCACGAcc < 2:2599637‑M1/13‑1 (MQ=255) ggtgattagctcagctgggagagcacctcccttacaaggagggggtcggcggttcgatcccgtcatcacccaccacttcgggtcgttagctcagttggtagagcagttgacttttaatcaattggtcgcaggttcgaATCCTGCACGAcc > 1:628245‑M1/138‑150 (MQ=255) ggtgattagctcagctgggagagcacctcccttacaaggagggggtcggcggttcgatcccgtcatcacccaccacttcgggtcgttagctcagttggtagagcagttgacttttaatcaattggtcgcaggttcgaATCCTGCACGAcc < 2:3391910‑M1/13‑1 (MQ=255) ggtgattagctcagctgggagagcacctcccttacaaggagggggtcggcggttcgatcccgtcatcacccaccactgcgggtcgttagctcagttggtagagcagttgacttttaatcaattggtcgcaggttcgaATCCTGCACGAcc < 2:1026760‑M1/13‑1 (MQ=255) gtgattagctcagctgggagagcacctcccttacaaggtgggggtcggcggttcgatcccgtcatcacccaccacttcgggtcgttagctcagttggtagagcagttgacttttaatcaattggtcgcaggttcgaATCCTGCACGAccc > 1:2941560‑M1/137‑150 (MQ=255) aaaaaaGCGCCCTAAAGGCGCTTTTTTGCTATCTGCGATACTCAAAGATTCGAACCTGCAGCAGGTTTG‑AGTTGAGCGCAGCGAAACAACGGAGCCGCTCGCGGCGACGGCCCGAAGGGCGAGCGAAGCGAGTCATCCTGCACGACccac > 2:2540446/1‑150 (MQ=32) aaaaaGCGCCCTAAAGGCGCTTTTTTGCTATCTGCGATACTCAAAGATTCGAACCTGCAGCAGGTTTG‑AGTTGAGCGCAGCGAAACAACGGAGCCGCTCGCGGCGACGGCCCGAAGGGCGAGCGAAGCGAGTCATCCTGCACGACccacc > 2:2436632/1‑150 (MQ=32) attagctcagctgggagagcacctcccttacaaggagggggtcggcggttcgatcccgtcatcacccaccacttcgggtcgttagctcagttggtagagcagttgacttttaatcaattggtcgcaggttcgaATCCTGCACGACccacc < 1:1779436‑M1/17‑1 (MQ=255) attagctcagctgggagagcacctcccttacaaggagggggtcggcggttcgatcccgtcatcacccaccacttcgggtcgttagctcagttggtagagcagttgacttttaatcaattggtcgcaggttcgaATCCTGCACGACccacc < 2:112490‑M1/17‑1 (MQ=255) attagctcagctgggagagcacctcccttacaaggagggggtcggcggttcgatcccgtcatcacccaccacttcgggtcgttagctcaggtggtagtgcagttgacttttaatcaattggtcgcaggttcgaATCCTGCACGACccacc < 1:2789529‑M1/17‑1 (MQ=255) tagctcagctgggagagcacctcccttacaaggagggggtcggcggttcgatcccgtcatcacccaccacttcgggtcgttagctcagttggtagagcagttgacttttaatcaattggtcgcaggttcgaATCCTGCACGACCCACCaa > 1:1910675‑M1/132‑150 (MQ=255) tagctcagctgggagagcacctcccttacaaggagggggtcggcggttcgatcccgtcatcacccaccacttcgggtcgttagctcagttggtagagcagttgacttttaatcaattggtcgcaggttcgaATCCTGCACGACCCACCaa < 1:4208812‑M1/19‑1 (MQ=255) aGCGCCCTAAAGGCGCTTTTTTGCTATCTGCGATACTCAAAGATTCGAACCTGCAGCAGGTTTG‑AGTTGAGCGCAGCGAAACAACGGAGCCGCTCGCGGCGACGGCCCGAAGGGCGAGCGAAGCGAGTCATCCTGCACGACCCACCAATg > 2:1469705/1‑150 (MQ=32) cccTAAAGGCGCTTTTTTGCTATCTGCGATACTCAAAGATTCGAACCTGCAGCAGGTTTG‑AGTTGAGCGCAGCGAAACAACGGAGCCGCTCGCGGCGACGGCCCGAAGGGCGAGCGAAGCGAGTCATCCTGCACGACCCACCAATGTaaa > 1:3469715/1‑150 (MQ=32) cccTAAAGGCGCTTTTTTGCTATCTGCGATACTCAAAGATTCGAACCTGCAGCAGGTTTG‑AGTTGAGCGCAGCGAAACAACGGAGCCGCTCGCGGCGACGGCCCGAAGGGCGAGCGAAGCGAGTCATCCTGCACGACCCACCAATGTaaa > 1:3411239/1‑150 (MQ=32) cagctgggagagcacctcccttacaaggagggggtcggcggttcgatcccgtcatcacccaccacttcgggtcgttagctcagttggtagagcagttgacttttaatcaattggtcgcaggttcgaATCCTGCACGACCCACCAATGTaa > 1:3381164‑M1/127‑150 (MQ=255) ccTAAAGGCGCTTTTTTGCTATCTGCGATACTCAAAGATGCGAACCTGCAGCAGGTTTG‑AGTTGAGCGCAGCGAAACAACGGAGCCGCTCGCGGCGACGGCCCGAAGGGCGAGCGACGCGAGGCATCCTGCACGACCCACCAATGTaaaa > 2:1720513/1‑150 (MQ=12) ctgggagagcacctcccttacaaggagggggtcggcggttcgatcccgtcatcacccaccacttcgggtcgttagctcagttggtagagcagttgacttttaatcaattggtcgcaggttcgaATCCTGCACGACCCACCAATGTaaaaa < 1:357059‑M1/27‑1 (MQ=255) tgggagagcacctcccttacaaggagggggtcggcggttcgatcccgtcatcacccaccacttcgggtcgttagctcagttggtagagcagttgacttttaatcaattggtcgcaggttcgaATCCTGCACGACCCACCAATGTaaaaaa > 1:335483‑M1/123‑150 (MQ=255) gggagagcacctcccttacaaggagggggtcggcggttcgatcccgtcatcacccaccacttcgggtcgttagctcagttggtagagcagttgacttttaatcaattggtcgcaggttcgaATCCTGCACGACCCACCAATGTAAAAAAg < 2:1279335‑M1/29‑1 (MQ=255) ggagagcacctcccttacaaggagggggtcggcggttcgatcccgtcatcacccaccacttcgggtcgttagctcagttggtagagcagttgacttttaatcaattggtcgcaggttcgaATCCTGCACGACCCACCAATGTAAAAAAgc > 1:933686‑M1/121‑150 (MQ=255) agcacctcccttacaaggagggggtcggcggttcgatcccgtcatcacccaccacttcgggtcgttagctcagttggtagagcagttgacttttaatcaattggtcgcaggttcgaATCCTGCACGACCCACCAATGTAAAAAAGCGccc < 1:3805471‑M1/34‑1 (MQ=255) attttttGCTATCTGCTATACTCAAAGTTTCGAACCTGCAGCTGGTTTG‑AGTTGAGCGCAGCGAAAAAACGGAGCCGCTCGCGGCGACGGCCCGAAGGGCGAGCGAAGCGAGTCATCCTGCACGACCCACCAATGTAAAAAAGCGCCCTa < 2:691178/149‑1 (MQ=255) ttttttGCTATCTGCGATACTCAAAGATTCGAACCTGCAGCAGGTTTG‑AGTTGAGCGCAGCGAAACAACGGAGCCGCTCGCGGCGACGGCCCGAAGGGCGAGCGAAGCGAGTCATCCTGCACGACCCACCAATGTAAAAAAGCGCCCTaa > 1:3905991/1‑150 (MQ=32) ttttttGCTACCTGCGATACTCAACTTCTCGCACCTGCAGCTGGTTTG‑AGTGGTGGGGAGCTTCACTTCGGAGGGGGTGGCGGCGACGGCCCGAAGGGCGAGCGAAGCGAGTCATCCTGCACGACCCACCAATGTAAAAAAGCGCCCTaa < 2:2739921/150‑1 (MQ=2) cacctcccttacaaggagggggtcggcggttcgatcccgtcatcacccaccacttcgggtcgttagctcagttggtagagcagttgacttttaatcaattggtcgcaggttcgaATCCTGCACGACCCACCAATGTAAAAAAGCGCCCTa > 2:1935480‑M1/115‑150 (MQ=255) tttttGCTATCTGCTATACTCAAATATTCGACCCTGCAGCAGTTTTG‑AGTTGAGCGCAGCTAAACAACGGAGCCGCTCGCGGCGACGGCCCGAAGGGCGAGCGAAGCGAGTCATCCTGCACGACCCACCAATGTAAAAAAGCGCCCTaaa < 2:4281614/150‑1 (MQ=11) tttttGCTATCTGCGATACTCAAAGATTCGAACCTGCAGCAGGTTTG‑AGTTGAGCGCAGCGAAACAACGGAGCCGCTCGCGGCGACGGCCCGAAGGGCGAGCGAAGCGAGTCATCCTGCACGACCCACCAATGTAAAAAAGCGCCCTaaa > 2:272019/1‑150 (MQ=32) acctcccttacaaggagggggtcggcggttcgatcccgtcatcacccaccacttcgggtcgttagctcagttggtagagcagttgacttttaatcaattggtcgcaggttcgaATCCTGCACGACCCACCAATGTAAAAAAGCGCCCTaa < 2:2854216‑M1/37‑1 (MQ=255) cctcccttacaaggagggggtcggcggttcgatcccgtcatcacccaccacttcgggtcgtgagctcagttggtagagccggtgactgttaatcaagtggtcgcaggtgcgaATCCTGCACGACCCACCAATGTAAAAAAGCGCCCTaaa < 1:2050586‑M1/38‑1 (MQ=255) cccttacaaggagggggtcggcggttcgatcccgtcatcacccaccacttcgggtcgttagctcagttggtagagcagttgacttttaatcaattggtcgcaggttcgaATCCTGCACGACCCACCAATGTAAAAAAGCGCCCTAAAGgc > 1:1590323‑M1/110‑150 (MQ=255) tacaaggagggggtcggcggttcgatcccgtcatcacccaccacttcgggtcgttagctcagttggtagagcagttgacttttaatcaattggtcgcaggttcgaATCCTGCACGACCCACCAATGTAAAAAAGCGCCCTAAAGGCGCtt > 1:3110083‑M1/106‑150 (MQ=255) acaaggagggggtcggcggttcgatcccgtcatcacccaccacttcgggtcgttagctcagttggtagagcagttgacttttaatcaattggtcgcaggttcgaATCCTGCACGACCCACCAATGTAAAAAAGCGCCCTCAAGGCGCttt < 2:3631781‑M1/46‑1 (MQ=255) aaggagggggtcggcggttcgatcccgtcatcacccaccacttcgggtcgttagctcagttggtagagcagttgacttttaatcaattggtcgcaggttcgaATCCTGCACGACCCACCAATGTAAAAAAGCGCCCTAAAGGCGCttttt > 2:4230022‑M1/103‑150 (MQ=255) caacaccaTTCCAACCTGCCGC‑GGTTTGTTGTTGCGCCCCCCAAACCACCGGAGCCGCTCGCGGCGACGGCCCGAAGGGCGAGCGAAGCGAGTCATCCTGCACGACCCACCAATGTAAAAAAGCGCCCTAAAGGCGCTTTTTTGCTATTc < 2:736943/143‑1 (MQ=11) acagtttCGACCCTGCTGCTGTTTTG‑CGTGGCGCGCTGCTAAACAACGGAGCCGCTCGCGGCGACGGCCCGAAGGGCGAGCGAAGCGAGTCATCCTGCACGACCCACCAATGTAAAAAAGCGCCCTAAAGGCGCTTTTTTGCTATTCAgg < 2:3718704/145‑1 (MQ=11) gAACCTGCAGCAGGTTTG‑AGTTGAGCGCAGCGAAACAACGGAGCCGCTCGCGGCGACGGCCCGAAGGGCGAGCGAAGCGAGTCATCCTGCACGACCCACCAATGTAAAAAAGCGCCCTAAAGGCGCTTTTTTGCTATTCAGGCATCCTCa > 2:3790300/1‑150 (MQ=40) ccTGCAGCAGGTTTG‑AGTTGAGCGCAGCGAAACAACGGAGCCGCTCGCGGCGACGGCCCGAAGGGCGAGCGAAGCGAGTCATCCTGCACGACCCACCAATGTAAAAAAGCGCCCTAAAGGCGCTTTTTTGCTATTCAGGCATCCTCAAtt > 1:4012674/1‑150 (MQ=255) ccTGCAGCAGGTTTG‑AGTTGAGCGCAGCGAAACAACGGAGCCGCTCGCGGCGACGGCCCGAAGGGCGAGCGAAGCGAGTCATCCTGCACGACCCACCAATGTAAAAAAGCGCCCTAAAGGCGCTTTTTTGCTATTCAGGCATCCTCAAtt > 1:1418810/1‑150 (MQ=255) ggTTTG‑AGTCGTGCGCTGCGAAACATTGGAGCCGCGCGCGGCGACGGCCCGATGGGCGTGCGAAGCGAGTCATCCTGCACGACCCACCTATGTAAAAAAGCGCCCTAAAGGCGCTTTTTTGCTATTCAGGCATCCTCAATTTCACTTTGt < 1:3263582/150‑1 (MQ=17) gTTTG‑AGTTGAGCGCAGCGAAACAACGGAGCCGCTCGCGGCGACGGCCCGAAGGGCGAGCGAAGCGAGTCATCCTGCACGACCCACCAATGTAAAAAAGCGCCCTAAAGGCGCTTTTTTGCTATTCAGGCATCCTCAATTTCACTTTGTa > 2:4225382/1‑150 (MQ=255) tttt‑AGTTGAGCGCAGCTAAAAAACGGAGCCGCTCGCGGCGACGGCCCGAAGGGCGAGCGAAGCGAGTCATCCTGCACGACCCACCAATGTAAAAAAGCGCCCTAAAGGCGCTTTTTTGCTATTCAGGCATCCTCAATTTCACTTTGTaa < 2:2025074/150‑1 (MQ=255) tttG‑TGTTGAGCGCACCCACACAACGGAGCCGCTCGCGGCGACGGCCCGAAGGGCGAGCGAAGCGAGTCATCCTGCACGACCCACCAATGTAAAAAAGCGCCCTAAAGGCGCTTTTTTGCTATTCAGGCATCCTCAATTTCACTTTGTaa < 1:1506145/150‑1 (MQ=255) tgttgtgCGCTGCTAAACAACGGAGCCGCTCGCGGCGACGGCCCGAAGGGCGAGCGAAGCGAGTCATCCTGCACGACCCACCAATGTAAAAAAGCGCCCTAAAGGCGCTTTTTTGCTATTCAGGCATCCTCAATTTCACTTTGTAAACCt < 1:1989680/149‑1 (MQ=255) gagCGCAGCTAAACAACGGAGCCGCTCGCGGCGACGGCCAGAAGGGAGAGCGAAGCTAGTCATCCTGCACGACCCACCAATGTAAAAAAGCGCCCTAAAGGCGCTTTTTTGCTATTCAGGCATCCTCAATTTCACTTTGTAAACCtgatg < 1:4280323/150‑1 (MQ=255) cgcAGCGAAACAACGGAGCCGCTCGCGGCGACGGCCCGAAGGGCGAGCGAAGCGAGTCATCCTGCACGACCCACCAATGTAAAAAAGCGCCCTAAAGGCGCTTTTTTGCTATTCAGGCATCCTCAATTTCACTTTGTAAACCTGATGACa > 2:1601828/1‑150 (MQ=255) cgcAGCGAAACAACGGAGCCGCTCGCGGCGACGGCCCGAAGGGCGAGCGAAGCGAGTCATCCTGCACGACCCACCAATGTAAAAAAGCGCCCTAAAGGCGCTTTTTTGCTATTCAGGCATCCTCAATTTCACTTTGTAAACCTGATGACa > 2:1602132/1‑150 (MQ=255) cgcAGCGAAACAACGGAGCCGCTCGCGGCGACGGCCCGAAGGGCGAGCGAAGCGAGTCATCCTGCACGACCCACCAATGTAAAAAAGCGCCCTAAAGGCGCTTTTTTGCTATTCAGGCATCCTCAATTTCACTTTGTAAACCTGATGACa > 1:224229/1‑150 (MQ=255) cgcAGCGAAACAACGGAGCCGCTCGCGGCGACGGCCCGAAGGGCGAGCGAAGCGAGTCATCCTGCACGACCCACCAATGTAAAAAAGCGCCCTAAAGGCGCTTTTTTGCTATTCAGGCATCCTCAATTTCACATTGTAAACCTGATGACa > 1:226590/1‑150 (MQ=255) gcAGCGAAACAACGGAGCCGCTCGCGGCGACGGCCCGAAGGGCGAGCGAAGCGAGTCATCCTGCACGTCCCACCAATGTAAAAAAGCGCCCTAAAGGCGCTTTTTTGCTATTCCGGCATCCTCAATTTCACTTTGTAAACCTGATGACAt > 1:2899259/1‑150 (MQ=255) gtcgttagctcagttggtagagcagttgacttttaatcaattggtcgcaggttcgaATcc > 2:1650158‑M1/57‑60 (MQ=255) gttagctcagttggtagagcagttgacttttaatcaattggtcgcaggttcgaAt < 2:3454343‑M1/2‑1 (MQ=255) gttagctcagttggtagagcagttgacttttaatcaattggtcgcaggttcgaATCCTGCACGACccacca < 2:2559662‑M1/18‑1 (MQ=255) gttagctcagttggtagagcagttgacttttaatcaattggtcgcaggttcgaATCCTGCACGACccacca > 1:2559702‑M1/54‑71 (MQ=255) cGAACCAACGGAGCCGCTCGCGGCGACGGCCCGAAGGGCGAGCGACGCGAGTCATCCTGCACGACCCACCAATGTAAAAAAGCGCCCTAAAGGCGCTTTTTTGCTATTCAGGCATCCTCAATTTCACTTTGTAAACCTGATGACATCGTc < 1:1685672/150‑1 (MQ=255) ttagctcagttggcagtgcagttgacttccaatcaattggtcgcaggtactaATCCGGCACGACCCACCAATGTAAAAAAGCGCCCTAAAGGCGCTTTTTTGCTATTCAGGCATCCTCAATTTCACTTTGTAAACCTGATGACATCGTCa > 1:2207898‑M1/53‑150 (MQ=255) tacactacGGTGCCGGTCGCGGCGACGGCCCGACGGGCGAGCGAAGCGAGTCATCCTGCACGACCCACCAATGTAAAAAAGCGCCCTAAAGGCGCTTTTTTGCTATTCAGGCATCCTCAATTTCACTTTGTAAACCTGATGACATCGTCa < 1:96335/144‑1 (MQ=18) gAAACAACGGAGCCGCTCGCGGCGACGGCCCGAAGGGCGAGCGAAGCGAGTCATCCTGCACGACCCACCAATGTAAAAAAGCGCCCTAAAGGCGCTTTTTTGCTATTCAGGCATCCTCAATTTCACTTTGTAAACCTGATGACATCGTCa > 2:4106712/1‑150 (MQ=255) gAAACAACGGAGCCGCTCGCGGCGACGGCCCGAAGGGCGAGCGAAGCGAGTCATCCTGCACGACCCACCAATGTAAAAAAGAGCCCTAAATGCGCTTTTTTGCTATTCAGGCATCCTCAATTTCACTTTGTAAAACTGATTACATAGTCa > 1:1117457/1‑150 (MQ=18) aacaacGGAGCCGCTCGCGGCGACGGCCCGAAGGGCGAGCGAAGCGAGTCATCCTGCACGACCCACCAATGTAAAAAAGCGCCCTAAAGGCGCTTTTTTGCTATTCAGGCATCCTCAATTTCACTTTGTAAACCTGATGACATCGTCaga > 1:2483183/1‑150 (MQ=255) caacGGAGCCGCTCGCGGCGACGGCCCGAAGGGCGAGCGAAGCGAGTCATCCTGCACGACCCACCAATGTAAAAAAGCGCCCTAAAGGCGCTTTTTTGCTATTCAGGCATCCTCAATTTCACTTTGTAAACCTGATGACATCGTCAGAGc > 1:3201892/1‑150 (MQ=255) agtgAGCAGCTGGGGGCGATGGCGCTATGGGCGTGCGAAGCTAGTCATCCTGCACGACCCACCTATGTAAAAAAGCGCCCTAAAGGCGCTTTTTTGCTATTCAGGCATCCTCAATTTCACTTTGTAAACCTGATGACATCGTCAGAGCtt < 1:2424901/147‑1 (MQ=21) ggAGCCGCTCGCGGCGACGGCCCGAAGGGCGAGCGAAGCGAGTCATCCTGCACGACCCACCAATGTAAAAAAGCGCCCTAAAGGCGCTTTTTTGCTATTCAGGCATCCTCAATTTCACTTTGTAAACCTGATGACATCGTCAGAGCTTAc > 1:1020485/1‑150 (MQ=255) ggAGCCGCTCGCGGCGACGGCCCGAAGGGCGAGCGAAGCGAGTCATCCTGCACGACCCACCAATGTAAAAAAGCGCCCTAAAGGCGCTTTTTTGCTATTAAGGCATCCTCAATTTCACTTTTTAAACCTGATTACATCGTCAGAGCTTAc > 1:456518/1‑150 (MQ=255) gAGCCGCTCGCGGCGACGGCCCGAAGGGCGAGCGAAGCGAGTCATCCTGCACGACCCACCAATGTAAAAAAGCGCCCTAAAGGCGCTTTTTTGCTATTCAGGCATCCTCAATTTCACTTTGTAAACCTGATGACATCGTCAGAGCTTACt < 1:4089010/150‑1 (MQ=255) tCGCGGCGACGGCCCGAAGGGCGAGCGAAGCGAGTCATCCTGCACGACCCACCAATGTAAAAAAGCGCCCTAAAGGCGCTTTTTTGCTATTCAGGCATCCTCAATTTCACTTTGTAAACCTGATGACATCGTCAGAGCTTACTGTgcaag > 2:922797/1‑150 (MQ=255) agcagttgacttttaatcaattggtcgcaggttcgaATCCt > 1:85716‑M1/37‑41 (MQ=255) agcagttgacttttaatcaattggtcgcaggttcgaATCCt < 2:85716‑M1/5‑1 (MQ=255) cgcgGCGACGGCCCGAAGGGCGAGCGAAGCGAGTCATCCTGCACGACCCACCAATGTAAAAAAGCGCCCTAAAGGCGCTTTTTTGCTATTCAGGCATCCTCAATTTCACTTTGTAAACCTGATGACATCGTCAGAGCTTACTGTgcaagc > 1:4343089/1‑150 (MQ=255) gcggcgACGGCCCGAAGGGCGAGCGAAGCGAGTCATCCTGCACGACCCACCAATGTAAAAAAGCGCCCTAAAGGCGCTTTTTTGCTATTCAGGCATCCTCAATTTCACTTTGTAAACCTGATGACATCGTCAGAGCTTACTGTgcaagca < 2:4150603/150‑1 (MQ=255) agttgacttttaatcaattggtcgcaggttcgaATCCTGCACGACcca < 2:2835055‑M1/15‑1 (MQ=255) agttgacttttaatcaattggtcgcaggttcgaATCCTGCACGACcca > 1:2835055‑M1/34‑48 (MQ=255) ggcgACGGCCCGAAGGGCGAGCGAAGCGAGTCATCCTGCACGACCCACCAATGTAAAAAAGCGCCCTAAAGGCGCTTTTTTGCTATTCAGGCATCCTCAATTTCACTTTGTAAACCTGATGACATCGTCAGAGCTTACTGTGCAAGCAAc > 1:310110/1‑150 (MQ=255) acttttaatcaattggtcgcaggttcgaATCCTGCACGACccacca < 2:2635008‑M1/18‑1 (MQ=255) acttttaatcaattggtcgcaggttcgaATCCTGCACGACccacca > 1:2634995‑M1/29‑46 (MQ=255) cttttaatcaattggtcgcaggttcgaATCCTGCACGACccacc < 2:3520411‑M1/17‑1 (MQ=255) cttttaatcaattggtcgcaggttcgaATCCTGCACGACccacc > 1:3520411‑M1/28‑44 (MQ=255) cGGCCCGAAGGGCGAGCGAAGCGAGTCATCCGGCACGACCCACCAATGTAAAAAAGCGCCCTAACGGCGCTTTTTTGCTATTCAGGCATCCTCAATTTCACTTTGTAAACCGGATGACATCGTCAGAGCTTACTGTGCAAGCAACTCTAt < 2:2814177/150‑1 (MQ=255) ttttaatcaattggtcgcaggttcgaATCCTGCACGACCCACCAATGTAAAAAAGCGCCCTAAAGGCGCttttt > 1:1213497‑M1/27‑74 (MQ=255) gCCCGAAGGGCGAGCGAAGCGAGTCATCCTGCACGACCCACCAATGTAAAAAAGCGCCCTAAAGGCGCTTTTTTGCTATTCAGGCATCCTCAATTTCACTTTGTAAACCTGATGACATCGTCAGAGCTTACTGTGCAAGCAACTCTATGt < 2:1337413/150‑1 (MQ=255) cccGACGGGCGAGCGAAGCGAGTCATCCTGCACGACCCACCAATGTAAAAAAGCGCCCTAAAGGCGCTTTTTTGCTATTCAGGCATCCTCAATTTCACTTTGTAAACCTGATGACATCGTCAGAGCTTACTGTGCAAGCAACTCTATGTc < 1:1660370/150‑1 (MQ=255) aatcaattggtcgcaggttcgaATCCTGCACGACcca > 1:2983675‑M1/23‑37 (MQ=255) caattggtcgcaggttcgaATCCTGCACGACccac < 2:1213275‑M1/16‑1 (MQ=255) gcgaGTCATCCTGCACGACCCACCAATGTAAAAAAGCGCCCTAAAGGCGCTTTTTTGCTATTCAGGCATCCTCAATTTCACTTTGTAAACCTGATGACATCGTCAGAGCTTACTGTGCAAGCAACTCTATGTCGGTGGAATTAGGCGTaa < 1:2764629/150‑1 (MQ=255) cgaGTCATCCTGCACGACCCACCAATGTAAAAAAGCGCCCTAAAGGCGCTTTTTTGCTATTCAGGCATCCTCAATTTCACTTTGTAAACCTGATGACATCGTCAGAGCTTACTGTGCAAGCAACTCTATGTCGGTGGAATTAGGCGTaaa < 2:3041858/150‑1 (MQ=255) aGTCATCCTGCACGACCCACCAATGTAAAAAAGCGCCCTAACGGCGCTTTTTTGCTATTCAGGCATCCTCAATTTCACTTTGTAAACCTGATGACATCGTCAGAGCTTACTGTGCAAGCAACTCTAGGTCGGTGGAATTAGGCGTAAAAt < 1:210054/150‑1 (MQ=255) aGTCATCCTGCACGACCCACCAATGTAAAAAAGCGCCCTAAAGGCGCTTTTTTGCTATTCAGGCATCCTCAATTTCACTTTGTAAACCTGATGACATCGTCAGAGCTTACTGTGCAAGCAACTCTATGTCGGTGGAATTAGGCGTAAAAt > 2:208052/1‑150 (MQ=255) gTCATCCTGCACGCCCCCCCCAGGTAAAAAAGCGCCCTAAAGGCGCTTTTTTGCTATTCAGGCATCCTCAATTTCACTTTGTAAACCTGATGACATCGTCAGAGCTTACTGTGCAAGCAACTCTATGTCGGTGGAATTAGGCGTAAAATg < 2:4031409/150‑1 (MQ=255) ATCCTGCACGACCCACCAATGTAAAAAAGCGCCCTAAAGGCGCTTTTTTGCTATTCCGGCATCCTCAATTTCACTTTGTAAACCTGATGACATCGTCAGAGCATACTGTGCCAGCAACTCTATGTCGGTGGAATTAGGCGTAAAATGACg < 1:3762152‑M1/150‑1 (MQ=255) ATCCTGCACGACCCACCAATGTAAAAAAGCGCCCTAAAGGCGCTTTTTTGCTATTCAGGCATCCTCAATTTCACTTTGTAAACCTGATGACATCGTCAGAGCTTACTGTGCAAGCAACTCTATGTCGGTGGAATTAGGCGTAAAATGACg < 2:3227795‑M1/150‑1 (MQ=255) | CGACCCACCAATGTAAAAAAGCGCCCTAAAGGCGCTTTTTTGCTATCTGCGATACTCAAAGATTCGAACCTGCAGCAGGTTTG‑AGTTGAGCGCAGCGAAACAACGGAGCCGCTCGCGGCGACGGCCCGAAGGGCGAGCGAAGCGAGTCATCCTGCACGACCCACCAATGTAAAAAAGCGCCCTAAAGGCGCTTTTTTGCTATTCAGGCATCCTCAATTTCACTTTGTAAACCTGATGACATCGTCAGAGCTTACTGTGCAAGCAACTCTATGTCGGTGGAATTAGGCGTAAAATGACG > CP009273/777099‑777396 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |