BRESEQ :: Evidence

New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	CP009273	1635219 =	16 (0.050)	249 (0.840)	140/274	NT	94.0%	intergenic (‑377/+377)	essQ/cspB	Qin prophage; putative S lysis protein/Qin prophage; cold shock protein
*	?	CP009273	= 2063752	NA (NA)	249 (0.840)	140/274	NT	94.0%	noncoding (1/1331 nt)	IS2	repeat region

Only 100 of 288 total aligned reads displayed.

CTTTTCCTGTGTGGTACGCCGTCTGCGTTTCTCCGGCCCTAAGACATCAATCATCTGTTCTCCAATGACTAGTCTAAAAACTAGTATTAAGACTATCACTTATTTAAGTGATATTGGTTGTCTGGAGATTCAGGGGGCCAGTCT‑AGTGGCGAAGCATCCTCCCGTGTTTTAATTCTCATTGATGGTCAGGAGGTAACTTATCAGCGCGCCGGAGATAATTATGGTGTGGGACTGTTGATAGATGAGTCTGCGCTGGAGCGTGTTGAGGTAGTGAAAGGTCCATATTCCGTACTG  >  CP009273/2063608‑2063901

   ttCCTGTGTGGTACGCCGTCTGCGTTTCTCCGGCCCTAAGACATCAATCATCTGTTCTCCAATGACTAGTCTAAAAACTAGTATTAAGACTATCACTTATTTAAGTGATATTGGTTGTCTGGAGATTCAGGGGGCCAGTCT‑AGTGGCGaa                                                                                                                                               <  2:4726682/150‑1 (MQ=34)

   ttCCTGTGTGGTACGCCGTCTGCGTTTCTCCGGCCCTAAGACATCAATCATCTGTTCTCCAATGACTAGTCTAAAAACTAGTATTAAGACTATCACTTATTTAAGTGATATTGGTTGTCTGGAGATTCAGGGGGCCAGTCT‑AGTGGCGaa                                                                                                                                               <  2:4386575/150‑1 (MQ=34)

   ttCCTGTGTGGTACGCCGTCTGCGTTTCTCCGGCCCTAAGACATCAATCATCTGTTCTCCAATGACTAGTCTAAAAACTAGTATTAAGACTATCACTTATTTAAGTGATATTGGTTGTCTGGAGATTCAGGGGGCCAGTCT‑AGTGGCGaa                                                                                                                                               <  1:2850557/150‑1 (MQ=34)

    tCCTGTGTGGTACGCCGTCTGCGTTTCTCCGGCCCTAAGACATCAATCATCTGTTCTCCAATGACTAGTCTAAAAACTAGTATTAAGACTATCACTTATTTAAGTGATATTGGTTGTCTGGAGATTCAGGGGGCCAGTCT‑AGTGGCGAAg                                                                                                                                              <  1:2714919/150‑1 (MQ=35)

      cTGTGTGGTACGCCGTCTGCGTTTCTCCGGCCCTAAGACATCAATCATCTGTTCTCCAATGACTAGTCTAAAAACTAGTATTAAGACTATCACTTATTTAAGTGATATTGGTTGTCTGGAGATTCAGGGGGCCAGTCT‑AGTGGCGAAGCa                                                                                                                                            >  2:914481/1‑150 (MQ=37)

       tgtgtgGTACGCCGTCTGCGTTTCTCCGGCCCTAAGACATCAATCATCTGTTCTCCAATGACTAGTCTAAAAACTAGTATTAAGACTATCACTTATTTAAGTGATATTGGTTGTCTGGAGATTCAGGGGGCCAGTCT‑AGTGGCGAAGCAt                                                                                                                                           >  2:4069057/1‑150 (MQ=38)

         tgtgGTACGCCGTCTGCGTTTCTCCGGCCCTAAGACATCAATCATCTGTTCTCCAATGACTAGTCTAAAAACTAGTATTAAGACTATCACTTATTTAAGTGATATTGGTTGTCTGGAGATTCAGGGGGCCAGTCT‑AGTGGCGAAGCAtcc                                                                                                                                         >  1:414050/1‑150 (MQ=39)

               aCGCCGTCTGCGTTTCTCCGGCCCTAAGACATCAATCATCTGTTCTCCAATGACTAGTCTAAAAACTAGTATTAAGACTATCACTTATTTAAGTGATATTGGTTGTCTGGAGATTCAGGGGGCCAGTCT‑AGTGGCGAAGCATCCTCCCgt                                                                                                                                   >  1:4664379/1‑150 (MQ=255)

                cGCCGTCTGCGTTTCTCCGGCCCTAAGACATCAATCATCTGTTCTCCAATGACTAGTCTAAAAACTAGTATTAAGACTATCACTTATTTAAGTGATATTGGTTGTCTGGAGATTCAGGGGGCCAGTCT‑AGTGGCGAAGCATCCTCCCgtg                                                                                                                                  <  2:4361205/150‑1 (MQ=255)

                  ccGTCTGCGTTTCTCCGGCCCTAAGACATCAATCATCTGTTCTCCAATGACTAGTCTAAAAACTAGTATTAAGACTATCACTTATTTAAGTGATATTGGTTGTCTGGAGATTCAGGGGGCCAGTCT‑AGTGGCGAAGCATCCTCCCGTGtt                                                                                                                                >  1:4964019/1‑150 (MQ=255)

                  ccGTCTGCGTTTCTCCGGCCCTAAGACATCAATCATCTGTTCTCCAATGACTAGTCTAAAAACTAGTATTAAGACTATCACTTATTTAAGTGATATTGGTTGTCTGGAGATTCAGGGGGCCAGTCT‑AGTGGCGAAGCATCCTCCCGTGtt                                                                                                                                >  2:1704289/1‑150 (MQ=255)

                   cGTCTGCGTTTCTCCGGCCCTAAGACATCAATCATCTGTTCTCCAATGACTAGTCTAAAAACTAGTATTAAGACTATCACTTATTTAAGTGATATTGGTTGTCTGGAGATTCAGGGGGCCAGTCT‑AGTGGCGAAGCATCCTCCCGTGttt                                                                                                                               <  2:3958899/150‑1 (MQ=255)

                   cGTCTGCGTTTCTCCGGCCCTAAGACATCAATCATCTGTTCTCCAATGACTAGTCTAAAAACTAGTATTAAGACTATCACTTATTTAAGTGATATTGGTTGTCTGGAGATTCAGGGGGCCAGTCT‑AGTGGCGAAGCATCCTCCCGTGttt                                                                                                                               <  1:2385337/150‑1 (MQ=255)

                   cGTCTGCGTTTCTCCGGCCCTAAGACATCAATCATCTGTTCTCCAATGACTAGTCTAAAAACTAGTATTAAGACTATCACTTATTTAAGTGAGATTGGTTGTCTGGAGATTCAGGGGGCCAGTCT‑AGTGGCGAAGCATCCTCCCGTGttt                                                                                                                               >  2:2362859/1‑150 (MQ=255)

                    gTCTGCGTTTCTCCGGCCCTAAGACATCAATCATCTGTTCTCCAATGACTAGTCTAAAAACTAGTATTAAGACTATCACTTATTTAAGTGATATTGGTTGTCTGGAGATTCAGGGGGCCAGTCT‑AGTGTCGAAGCATCCTCACGTGtttt                                                                                                                              >  2:3359014/1‑150 (MQ=255)

                    gTCTGCGTTTCTCCGGCCCTAAGACATCAATCATCTGTTCTCCAATGACTAGTCTAAAAACTAGTATTAAGACTATCACTTATTTAAGTGATATTGGTTGTCTGGAGATTCAGGGGGCCAGTCT‑AGTGGCGAAGCATCCTCCCGTGtttt                                                                                                                              <  1:2526526/150‑1 (MQ=255)

                    gTCTGCGTTTCTCCGGCCCTAAGACATCAATCATCTGTTCTCCAATGACTAGTCTAAAAACTAGTATTAAGACTATCACTTATTTAAGTGATATTGGTTGTCTGGAGATTCAGGGGGCCAGTCT‑AGTGGCGAAGCATCCTCCCGTGtttt                                                                                                                              >  2:585106/1‑150 (MQ=255)

                    gTCTGCGTTTCTCCGGCCCTAAGACATCAATCATCTGTTCTCCAATGACTAGTCTAAAAACTAGTATTAAGACTATCACTTATTTAAGTGATATTGGTTGTCTGGAGATTCAGGGGGCCAGTCT‑AGTGGCGAAGCATCCTCCCGTGtttt                                                                                                                              >  2:3540000/1‑150 (MQ=255)

                    gTCTGCGTTTCTCCGGCCCTAAGACATCAATCATCTGTTCTCCAATGACTAGTCTAAAAACTAGTATTAAGACTATCACTTATTTAAGTGATATTGGTTGTCTGGAGATTCAGGGGGCCAGTCT‑AGTGGCGAAGCATCCTCCCGTGtttt                                                                                                                              >  2:4337321/1‑150 (MQ=255)

                    gTCTGCGTTTCTCCGGCCCTAAGACATCAATCATCTGTTCTCCAATGACTAGTCTAAAAACTAGTATTAAGACTATCACTTATTTAAGTGATATTGGTTGTCTGGAGATTCAGGGGGCCAGTCT‑AGTGGCGAAGCATCCTCCCGTGtttt                                                                                                                              >  2:121235/1‑150 (MQ=255)

                    gTCTGCGTTTCTCCGGCCCTAAGACATCAATCATCTGTTCTCCAATGACTAGTCTAAAAACTAGTATTAAGACTATCACTTATTTAAGTGATATTGGTTGTCTGGAGATTCAGGGGGCCAGTCT‑AGTGGCGAAGCATCCTCCCGTGtttt                                                                                                                              >  2:2860075/1‑150 (MQ=255)

                       tGCGTTTCTCCGGCCCTAAGACATCAATCATCTGTTCTCCAATGACTAGTCTAAAAACTAGTATTAAGACTATCACTTATTTAAGTGATATTGGTTGTCTGGAGATTCAGGGGGCCAGTCT‑AGTGGCGAAGCATCCTCCCGTGTTTTAAt                                                                                                                           >  1:573413/1‑150 (MQ=255)

                       tGCGTTTCTCCGGCCCTAAGACATCAATCATCTGTTCTCCAATGACTAGTCTAAAAACTAGTATTAAGACTATCACTTATTTAAGTGATATTGGTTGTCTGGAGATTCAGGGGGCCAGTCT‑AGTGGCGAAGCATCCTCCCGTGTTTTAAt                                                                                                                           >  1:3584794/1‑150 (MQ=255)

                        gCGTTTCTCCGGCCCTAAGACATCAATCATCTGTTCTCCAATGACTAGTCTAAAAACTAGTATTAAGACTATCACTTATTTAAGTGATATTGGTTGTCTGGAGATTCAGGGGGCCAGTCT‑AGTGGCGAAGCATCCTCCCGTGTTTTAAtt                                                                                                                          <  1:2495480/150‑1 (MQ=255)

                         cGTTTCTCCGGCCCTAAGACATCAATCATCTGTTCTCCAATGACTAGTCTAAAAACTAGTATTAAGACTATCACTTATTTAAGTGATATTGGTTGTCTGGAGATTCAGGGGGCCAGTCT‑AGTGGCGAAGCATCCTCCCGTGTTTTAATtc                                                                                                                         >  2:4829047/1‑150 (MQ=255)

                         cGTTTCTCCGGCCCTAAGACATCAATCATCTGTTCTCCAATGACTAGTCTAAAAACTAGTATTAAGACTATCACTTATTTAAGTGATATTGGTTGTCTGGAGATTCAGGGGGCCAGTCT‑AGTGGCGAAGCATCCTCCCGTGTTTTAATtc                                                                                                                         >  2:3562958/1‑150 (MQ=255)

                         cGTTTCTCCGGCCCTAAGACATCAATCATCTGTTCTCCAATGACTAGTCTAAAAACTAGTATTAAGACTATCACTTATTTAAGTGATATTGGTTGTCTGGAGATTCAGGGGGCCAGTCT‑AGTGGCGAAGCATCCTCCCGTGTTTTAATtc                                                                                                                         >  2:6192/1‑150 (MQ=255)

                          gTTTCTCCGGCCCTAAGACATCAATCATCTGTTCTCCAATGACTAGTCTAAAAACTAGTATTAAGACTATCACTTATTTAAGTGATATTGGTTGTCTGGAGATTCAGGGGGCCAGTCT‑AGTGGCGAAGCATCCTCCCGTGTTTTAATtct                                                                                                                        <  2:4987807/150‑1 (MQ=255)

                            ttCTCCGGCCCTAAGACATCAATCATCTGTTCTCCAATGACTAGTCTAAAAACTAGTATTAAGACTATCACTTATTTAAGTGATATTGGTTGTCTGGAGATTCAGGGGGCCAGTCT‑AGTGGCGAAGCATCCTCCCGTGTTTTAATTCTCa                                                                                                                      <  1:4650145/150‑1 (MQ=255)

                             tctcCGGCCCTAAGACATCAATCATCTGTTCTCCAATGACTAGTCTAAAAACTAGTATTAAGACTATCACTTATTTAAGTGATATTGGTTGTCTGGAGATTCAGGGGGCCAGTCT‑AGTGGCGAAGCATCCTCCCGTGTTTTAATTCTCAt                                                                                                                     <  2:970448/150‑1 (MQ=255)

                              ctcCGGCCCTAAGACATCAATCATCTGTTCTCCAATGACTAGTCTAAAAACTAGTATTAAGACTATCACTTATTTAAGTGATATTGGTTGTCTGGAGATTCAGGGGGCCAGTCTAATTGGatttgcccctatatttccagacatctgtta                                                                                                                     >  2:174526‑M1/1‑120 (MQ=255)

                              ctcCGGCCCTAAGACATCAATCATCTGTTCTCCAATGACTAGTCTAAAAACTAGTATTAAGACTATCACTTATTTAAGTGATATTGGTTGTCTGGAGATTCAGGGGGCCAGTCT‑AGTGGCGAAGCATCCTCCCGTGTTTTAATTCTCAtt                                                                                                                    <  1:2886271/150‑1 (MQ=255)

                                  ggCCCTAAGACATCAATCATCTGTTCTCCAATGACTAGTCTAAAAACTAGTATTAAGACTATCACTTATTTAAGTGATATTGGTTGTCTGGAGATTCAGGGGGCCAGTCT‑AGTGGCGAAGCATCCTCCCGTGTTTTAATTCTCATTGATg                                                                                                                >  2:3621099/1‑150 (MQ=255)

                                   gCCCTAAGACATCAATCATCTGTTCTCCAATGACTAGTCTAAAAACTAGTATTAAGACTATCACTTATTTAAGTGATATTGGTTGTCTGGAGATTCAGGGGGCCAGTCT‑AGTGGCGAAGCATCCTCCCGTGTTTTAATTCTCATTGATgg                                                                                                               >  2:4115149/1‑150 (MQ=255)

                                   gCCCTAAGACATCAATCATCTGTTCTCCAATGACTAGTCTAAAAACTAGTATTAAGACTATCACTTATTTAAGTGATATTGGTTGTCTGGAGATTCAGGGGGCCAGTCT‑AGTGGCGAAGCATCCTCCCGTGTTTTAATTCTCATTGATgg                                                                                                               >  1:2190546/1‑150 (MQ=255)

                                    cccTAAGACATCAATCATCTGTTCTCCAATGACTAGTCTAAAAACTAGTATTAAGACTATCACTTATTTAAGTGATATTGGTTGTCTGGAGATTCAGGGGGCCAGTCT‑AGTGGCGAAGCATCCTCCCGTGTTTTAATTCTCATTGATGGt                                                                                                              >  1:2684587/1‑150 (MQ=255)

                                     ccTAAGACATCAATCATCTGTTCTCCAATGACTAGTCTAAAAACTAGTATTAAGACTATCACTTATTTAAGTGATATTGGTTGTCTGGAGATTCAGGGGGCCAGTCT‑AGTGGCGAAGCATCCTCCCGTGTTTTAATTCTCATTGATGGTc                                                                                                             >  1:4248419/1‑150 (MQ=255)

                                            cATCAATCATCTGTTCTCCAATGACTAGTCTAAAAACTAGTATTAAGACTATCACTTATTTAAGTGATATTGGTTGTCTGGAGATTCAGGGGGCCAGTCT‑AGTGGCGAAGCATCCTCCCGTGTTTTAATTCTCATTGATGGTCAGGAGGt                                                                                                      <  2:4890424/150‑1 (MQ=255)

                                             atcaatcaTCTGTTCTCCAATGACTAGTCTAAAAACTAGTATTAAGACTATCACTTATTTAAGTGATATTGGTTGTCTGGAGATTCAGGGGGCCAGTCT‑AGTGGCGAAGCATCCTCCCGTGTTTTAATTCTCATTGATGGTCAGGAGGTa                                                                                                     <  1:435129/150‑1 (MQ=255)

                                               caatcaTCTGTTCTCCAATGACTAGTCTAAAAACTAGTATTAAGACTATCACTTATTTAAGTGATATTGGTTGTCTGGAGATTCAGGGGGCCAGTCT‑AGTGGCGAAGCATCCTCCCGTGTTTTAATTCTCATTGATGGTCAGGAGGTAAc                                                                                                   >  1:1024843/1‑150 (MQ=255)

                                                aatcaTCTGTTCTCCAATGACTAGTCTAAAAACTAGTATTAAGACTATCACTTATTTAAGTGATATTGGTTGTCTGGAGATTCAGGGGGCCAGTCT‑AGTGGCGAAGCATCCTCCCGTGTTTTAATTCTCATTGATGGTCAGGAGGTAACt                                                                                                  <  1:2215150/150‑1 (MQ=255)

                                                     tcTGTTCTCCAATGACTAGTCTAAAAACTAGTATTAAGACTATCACTTATTTAAGTGATATTGGTTGTCTGGAGATTCAGGGGGCCAGTCT‑CGTGGCGAAGCATCCTCCCGTGTTTTAATTCTCATTGATGGTCAGGAGGTAACTTATCa                                                                                             >  2:3506531/1‑150 (MQ=255)

                                                      cTGTTCTCCAATGACTAGTCTAAAAACTAGTATTAAGACTATCACTTATTTAAGTGATATTGGTTGTCTGGAGATTCAGGGGGCCAGTCT‑AGTGGCGAAGCATCCTCCCGTGTTTTAATTCTCATTGATGGTCAGGAGGTAACTTATCAg                                                                                            >  1:4773282/1‑150 (MQ=255)

                                                       tGTTCTCCAATGACTAGTCTAAAAACTAGTATTAAGACTATCACTTATTTAAGTGATATTGGTTGTCTGGAGATTCAGGGGGCCAGTCT‑AGTGGCGAAGCATCCTCCCGTGTTTTAATTCTCATTGATGGTCAGGAGGTAACTTATCAgc                                                                                           >  1:2136928/1‑150 (MQ=255)

                                                        gTTCTCCAATGACTAGTCTAAAAACTAGTATTAAGACTATCACTTATTTAAGTGATATTGGTTGTCTGGAGATTCAGGGGGCCAGTCT‑AGTGGCGAAGCATCCTCCCGTGTTTTAATTCTCATTGATGGTCAGGAGGTAACTTATCAgcg                                                                                          <  1:2605679/150‑1 (MQ=255)

                                                         ttCTCCAATGACTAGTCTAAAAACTAGTATTAAGACTATCACTTATTTAAGTGATATTGGTTGTCTGGAGATTCAGGGGGCCAGTCT‑AGTGGCGAAGCATCCTCCCGTGTTTTAATTCTCATTGATGGTCAGGAGGTAACTTATCAgcgc                                                                                         >  1:4072006/1‑150 (MQ=255)

                                                              cAATGACTAGTCTAAAAACTAGTATTAAGACTATCACTTATTTAAGTGATATTGGTTGTCTGGAGATTCAGGGGGCCAGTCT‑AGTGGCGAAGCATCCTCCCGTGTTTTAATTCTCATTGATGGTCAGGAGGTCCCTTATCAGCGCGCCgg                                                                                    >  1:3218555/1‑150 (MQ=255)

                                                                aTGACTAGTCTAAAAACTAGTATTAAGACTATCACTTATTTAAGTGATATTGGTTGTCTGGAGATTCAGGGGGCCAGTCT‑AGTGGCGAAGCATCCTCCCGTGTTTTAATTCTCATTGATGGTCAGGAGGTAACTTATCAGCGCGCCGgag                                                                                  >  1:3345268/1‑150 (MQ=255)

                                                                 tGACTAGTCTAAAAACTAGTATTAAGACTATCACTTATTTAAGTGATATTGGTTGTCTGGAGATTCAGGGGGCCAGTCT‑AGTGGCGAAGCATCCTCCCGTGTTTTAATTCTCATTGATGGTCAGGAGGTAACTTATCAGCGCGCCGgaga                                                                                 >  1:2275454/1‑150 (MQ=255)

                                                                  gACTAGTCTAAAAACTAGTATTAAGACTATCACTTATTTAAGTGATATTGGTTGTCTGGAGATTCAGGGGGCCAGTCT‑AGTGGCGAAGCATCCTCCCGTGTTTTAATTCTCATTGATGGTCAGGAGGTAACTTATCAGCGCGCCGGAGAt                                                                                >  2:3178534/1‑150 (MQ=255)

                                                                   aCTAGTCTAAAAACTAGTATTAAGACTATCACTTATTTAAGTGATATTGGTTGTCTGGAGATTCAGGGGGCCAGTCT‑AGTGGCGAAGCATCCTCCCGTGTTTTAATTCTCATTGATGGTCAGGAGGTAACTTATCAGCGCGCCGGAGATa                                                                               <  1:885555/150‑1 (MQ=255)

                                                                     tAGTCTAAAAACTATTATTAAGACTATCACTTATTTAAGTGATATTGGTTTTCTGGAGATTCAGGGGGCCAGTCT‑AGTGGCGAATCATCCTCCCGTGTTTTAAGTCTCATTGATGGTCAGGAGGTAACTTATCAGCGCGCCGGAGATAAt                                                                             <  1:3208080/150‑1 (MQ=255)

                                                                     tAGTCTAAAAACTAGTATTAAGACTATCACTTATTTAAGTGATATTGGTTGTCTGGAGATTCAGGGGGCCAGTCT‑AGTGGCGAAGCATCCTCCCGTGTTTTAATTCTCATTGATGGTCAGGAGGTAACTTATCAGCGCGCCGGAGATAAt                                                                             <  1:1809310/150‑1 (MQ=255)

                                                                      aGTCTAAAAACTAGTATTAAGACTATCACTTATTTAAGTGATATTGGTTGTCTGGAGATTCAGGGGGCCAGTCT‑AGTGGCGAAGCATCCTCCCGTGTTTTAATTCTCATTGATGGTCAGGAGGTAACTTATCAGCGCGCCGGAGATAAtt                                                                            >  1:377777/1‑150 (MQ=255)

                                                                       gTCTAAAAACTAGTATTAAGACTATCACTTATTTAAGTGATATTGGTTGTCTGGAGATTCAGGGGGCCAGTCT‑AGTGGCGAAGCATCCTCCCGTGTTTTAATTCTCATTGATGGTCAGGAGGTAACTTATCAGCGCGCCGGAGATAATTa                                                                           <  2:3064228/150‑1 (MQ=255)

                                                                         cTAAAAACTAGTATTAAGACTATCACTTATTTAAGTGATATTGGTTGTCTGGAGATTCAGGGGGCCAGTCT‑AGTGGCGAAGCATCCTCCCGTGTTTTAATTCTCATTGATGGTCAGGAGGTAACTTATCAGCGCGCCGGAGATAATTATg                                                                         >  2:2252875/1‑150 (MQ=255)

                                                                          tAAAAACTAGTATTAAGACTATCACTTATTTAAGTGATATTGGTTGTCTGGAGATTCAGGGGGCCAGTCT‑AGTGGCGAAGCATCCTCCCGTGTTTTAATTCTCATTGATGGTCAGGAGGTAACTTATCAGCGCGCCGGAGATAATTATgg                                                                        >  1:2594024/1‑150 (MQ=255)

                                                                          tAAAAACTAGTATTAAGACTATCACTTATTTAAGTGATATTGGTTGTCTGGAGATTCAGGGGGCCAGTCT‑AGTGGCGAAGCATCCTCCCGTGTTTTAATTCTCATTGATGGTCAGGAGGTAACTTATCAGCGCGCCGGAGATAATTATgg                                                                        >  2:4712852/1‑150 (MQ=255)

                                                                          tAAAAACTAGTATTAAGACTATCACTTATTTAAGTGATATTGGTTGTCTGGAGATTCAGGGGGCCAGTCT‑AGTGGCGAAGCATCCTCCCGTGTTTTAATTCTCATTGATGGTCAGGAGGTAACTTATCAGCGCGCCGGAGATAATTATgg                                                                        >  2:1856102/1‑150 (MQ=255)

                                                                             aaaCTAGTATTAAGACTATCACTTATTTAAGTGATATTGGTTGTCTGGAGATTCAGGGGGCCAGTCT‑AGTGGCGAAGCATCCTCCCGTGTTTTAATTCTCATTGATGGTCAGGAGGTAACTTATCAGCGCGCCGGAGATAATTATGgtgt                                                                     <  1:15603/150‑1 (MQ=255)

                                                                              aaCTAGTATTAAGACTATCACTTATTTAAGTGATATTGGTTGTCTGGAGATTCAGGGGGCCAGTCT‑AGTGGCGAAGCATCCTCCCGTGTTTTAATTCTCATTGATGGTCAGGAGGTAACTTATCAGCGCGCCGGAGATAATTATGGtgtg                                                                    >  1:5096562/1‑150 (MQ=255)

                                                                                 tAGTATTAAGACTATCACTTATTTAAGTGATATTGGTTGTCTGGAGATTCAGGGGGCCAGTCT‑AGTGGCGAAGCATCCTCCCGTGTTTTAATTCTCATTGATGGTCAGGAGGTAACTTATCAGCGCGCCGGAGATAATTATGGTGTGGGa                                                                 >  1:3698823/1‑150 (MQ=255)

                                                                                     aTTAAGACTATCACTTATTTAAGTGATATTGGTTGTCTGGAGATTCAGGGGGCCAGTCT‑AGTGGCGAAGCATCCTCCCGTGTTTTAATTCTCATTGATGGTCAGGAGGTAACTTATCAGCGCGCCGGAGATAATTATGGTGTGGGACTGt                                                             <  2:4261894/150‑1 (MQ=255)

                                                                                      ttAAGACTATCACTTATTTAAGTGATATTGGTTGTCTGGAGATTCAGGGGGCCAGTCT‑AGTGGCGAAGCATCCTCCCGTGTTTTAATTCTCATTGATGGTCAGGAGGTAACTTATCAGCGCGCCGGAGATAATTATGGTGTGGGACTGtt                                                            >  1:3167237/1‑150 (MQ=255)

                                                                                       tAAGACTATCACTTATTTAAGTGATATTGGTTGTCTGGAGATTCAGGGGGCCAGTCT‑AGTGGCGAAGCATCCTCCCGTGTTTTAATTCTCATTGATGGTCAGGAGGTAACTTATCAGCGCGCCGGAGATAATTATGGTGTGGGACTGTTg                                                           >  1:4858327/1‑150 (MQ=255)

                                                                                       tAAGACTATCACTTATTTAAGTGATATTGGTTGTCTGGAGATTCAGGGGGCCAGTCT‑AGTGGCGAAGCATCCTCCCGTGTTTTAATTCTCATTGATGGTCAGGAGGTAACTTATCAGCGCGCCGGAGATAATTATGGTGTGGGACTGTTg                                                           >  1:3850051/1‑150 (MQ=255)

                                                                                       tAAGACTATCACTTATTTAAGTGATATTGGTTGTCTGGAGATTCAGGGGGCCAGTCT‑AGTGGCGAAGCATCCTCCCGTGTTTTAATTCTCATTGATGGTCAGGAGGTAACTTATCAGCGCGCCGGAGATAATTATGGTGTGGGACTGTTg                                                           <  1:4570274/150‑1 (MQ=255)

                                                                                          gACTATCACTTATTTAAGTGATATTGGTTGTCTGGAGATTCAGGGGGCCAGTCT‑AGTGGCGAAGCATCCTCCCGTGTTTTAATTCTCATTGATGGTCAGGAGGTAACTTATCAGCGCGCCGGAGATAATTATGGTGTGGGACTGTTGATa                                                        <  2:133675/150‑1 (MQ=255)

                                                                                           aCTATCACTTATTTAAGTGATATTGGTTGTCTGGAGATTCAGGGGGCCAGTCT‑AGTGGCGAAGCATCCTCCCGTGTTTTAATTCTCATTGATGGTCAGGAGGTAACTTATCAGCGCGCCGGAGATAATTATGGTGTGGGACTGTTGATAg                                                       >  2:2545539/1‑150 (MQ=255)

                                                                                            cTATCACTTATTTAAGTGATATTGGTTGTCTGGAGATTCAGGGGGCCAGTCT‑AGTGGCGAAGCATCCTCCCGTGTTTTAATTCTCATTGATGGTCAGGAGGTAACTTATCAGCGCGCCGGAGATAATTATGGTGTGGGACTGTTGATAGa                                                      <  2:3396544/150‑1 (MQ=255)

                                                                                            cTATCACTTATTTAAGTGATATTGGTTGTCTGGAGATTCAGGGGGCCAGTCT‑AGTGGCGAAGCATCCTCCCGTGTTTTAATTCTCATTGATGGTCAGGAGGTAACTTATCAGCGCGCCGGAGATAATTATGGTGTGGGACTGTTGATAGa                                                      >  1:2674034/1‑150 (MQ=255)

                                                                                              aTCACTTATTTAAGTGATATTGGTTGTCTGGAGATTCAGGGGGCCAGTCT‑AGTGGCGAAGCATCCTCCCGTGTTTTAATTCTCATTGATGGTCAGGAGGTAACTTATCAGCGCGCCGGAGATAATTATGGTGTGGGACTGTTGATAGATg                                                    >  2:4192524/1‑150 (MQ=255)

                                                                                                   ttATTTAAGTGATATTGGTTGTCTGGAGATTCAGGGGGCCAGTCT‑AGTGGCGAAGCATCCTCCCGTGTTTTAATTCTCATTGATGGTCAGGAGGTAACTTATCAGCGCGCCGGAGATAATTATGGTGTGGGACTGTTGATAGATGAGTCt                                               <  1:2348970/150‑1 (MQ=255)

                                                                                                   ttATTTAAGTGATATTGGTTGTCTGGAGATTCAGGGGGCCAGTCT‑AGTGGCGAAGCATCCTCCCGTGTTTTAATTCTCATTGATGGTCAGGAGGTAACTTATCAGCGCGCCGGAGATAATTATGGTGTGGGACTGTTGATAGATGAGTCt                                               <  1:660272/150‑1 (MQ=255)

                                                                                                     aTTTAAGTGATATTGGTTGTCTGGAGATTCAGGGGGCCAGTCT‑AGTGGCGAAGCATCCTCCCGTGTTTTAATTCTCATTGATGGTCAGGAGGTAACTTATCAGCGCGCCGGAGATAATTATGGTGTGGGACTGTTGATAGATGAGTCTgc                                             <  1:3539833/150‑1 (MQ=255)

                                                                                                     aTTTAAGTGATATTGGTTGTCTGGAGATTCAGGGGGCCAGTCT‑AATGGatttgcccctatatttccagacatctgttatcacttaacccattacaagcccgctgccgcagatattcccgtggcgagcgataacccagcgcactatgcgga                                             >  1:3969922‑M1/1‑48 (MQ=255)

                                                                                                        tAAGTGATATTGGTTGTCTGGAGATTCAGGGGGCCAGTCT‑AGTGGCGAATCATCCTCCCGTGTTTTAATTCTCATTGATGGTCAGGAGGTAACTTATCAGCGCGCCGGATATAATTATGGTGTGGGACTGTTGATAGATGAGTCTGCGCt                                          >  2:865976/1‑150 (MQ=255)

                                                                                                        tAAGTGATATTGGTTGTCTGGAGATTCAGGGGGCCAGTCT‑AGTGGCGAAGCATCCTCCCGTGTTTTAATTCTCATTGATGGTCAGGAGGTAACTTATCAGCGCGCCGGAGATAATTATGGTGTGGGACTGTTGATAGATGAGTCTGCGCt                                          <  1:1516342/150‑1 (MQ=255)

                                                                                                           gTGATATTGGTTGTCTGGAGATTCAGGGGGCCAGTCT‑AGTGGCGAAGCATCCTCCCGTGTTTTAATTCTCATTGATGGTCAGGAGGTAACTTATCAGCGCGCCGGAGATAATTATGGTGTGGGACTGTTGATAGATGAGTCTGCGCTGGa                                       <  2:4577359/150‑1 (MQ=255)

                                                                                                             gATATTGGTTGTCTGGAGATTCAGGGGGCCAGTCT‑AGTGGCGAAGCATCCTCCCGTGTTTTAATTCTCATTGATGGTCAGGAGGTAACTTATCAGCGCGCCGGAGATAATTATGGTGTGGGACTGTTGATAGATGAGTCTGCGCTGGAGc                                     >  1:4455590/1‑150 (MQ=255)

                                                                                                                atTGGTTGTCTGGAGATTCAGGGGGCCAGTCT‑AGTGGCGAAGCATCCTCCCGTGTTTTAATTCTCATTGATGGTCAGGAGGTAACTTATCAGCGCGCCGGAGATAATTATGGTGTGGGACTGTTGATAGATGAGTCTGCGCTGGAGCgtg                                  >  1:119328/1‑150 (MQ=255)

                                                                                                                 ttGGTTGTCTGGAGATTCAGGGGGCCAGTCT‑AGTGGCGAAGCATCCTCCCGTGTTTTAATTCTCATTGATGGTCAGGAGGTAACTTATCAGCGCGCCGGAGATAATTATGGTGTGGGACTGTTGATAGATGAGTCTGCGCTGGAGCgtgt                                 <  2:518636/150‑1 (MQ=255)

                                                                                                                  tGGTTGTCTGGAGATTCAGGGGGCCAGTCT‑AGTGGCGAAGCATCCTCCCGTGTTTTAATTCTCATTGATGGTCAGGAGGTAACTTATCAGCGCGCCGGAGATAATTATGGTGTGGGACTGTTGATAGATGAGTCTGCGCTGGAGCGTGtt                                >  2:3223927/1‑150 (MQ=255)

                                                                                                                  tGGTTGTCTGGAGATTCAGGGGGCCAGTCT‑AGTGGCGAAGCATCCTCCCGTGTTTTAATTCTCATTGATGGTCAGGAGGTAACTTATCAGCGCGCCGGAGATAATTATGGTGTGGGACTGTTGATAGATGAGTCTGCGCTGGAGCGTGtt                                <  2:2647634/150‑1 (MQ=255)

                                                                                                                  tGGTTGTCTGGAGATTCAGGGGGCCAGTCT‑AGTGGCGAAGCATCCTCCCGTGTTTTAATTCTCATTGATGGTCAGGAGGTAACTTATCAGCGCGCCGGAGATAATTATGGTGTGGGACTGTTGATAGATGAGTCTGCGCTGGAGCGTGtt                                <  2:5037083/150‑1 (MQ=255)

                                                                                                                    gTTGTCTGGAGATTCAGGGGGCCAGTCT‑AGTGGCGAAGCATCCTCCCGTGTTTTAATTCTCATTGATGGTCAGGAGGTAACTTATCAGCGCGCCGGAGATAATTATGGTGTGGGACTGTTGATAGATGAGTCTGCGCTGGAGCGTGTTGa                              >  2:1093442/1‑150 (MQ=255)

                                                                                                                     ttGTCTGGAGATTCAGGGGGCCAGTCT‑AGTGGCGAAGCATCCTCCCGTGTTTTAATTCTCATTGATGGTCAGGAGGTAACTTATCAGCGCGCCGGAGATAATTATGGTGTGGGACTGTTGATAGATGAGTCTGCGCTGGAGCGTGTTGAg                             >  1:785942/1‑150 (MQ=255)

                                                                                                                     ttGTCTGGAGATTCAGGGGGCCAGTCT‑AGTGGCGAAGCATCCTCCCGTGTTTTAATTCTCATTGATGGTCAGGAGGTAACTTATCAGCGCGCCGGAGATAATTATGGTGTGGGACTGTTGATAGATGAGTCTGCGCTGGAGCGTGTTGAg                             >  1:786201/1‑150 (MQ=255)

                                                                                                                     ttGTCTGGAGATTCAGGGGGCCAGTCT‑AGTGGCGAAGCATCCTCCCGTGTTTTAATTCTCATTGATGGTCAGGAGGTAACTTATCAGCGCGCCGGAGATAATTATGGTGTGGGACTGTTGATAGATGAGTCTGCGCTGGAGCGTGTTGAg                             >  1:1970751/1‑150 (MQ=255)

                                                                                                                      tGTCTGGAGATTCAGGGGGCCAGTCT‑AGTGGCGAAGCATCCTCCCGTGTTTTAATTCTCATTGATGGTCAGGAGGTAACTTATCAGCGCGCCGGAGATAATTATGGTGTGGGACTGTTGATAGATGAGTCTGCGCTGGAGCGTGTTGAgg                            >  1:4332260/1‑150 (MQ=255)

                                                                                                                           ggAGAGTCAGGGGGCCAGTCT‑AGTGGCGAAGCATCCTCCCGTGTTTTAATTCTCATTGATGGTCAGGAGGTAACTTATCAGCGCGCCGGAGATAATTATGGTGTGGGACTGTTGATAGATGAGTCTGCGCTGGAGCGTGTTGAGGTAGTg                       <  1:936291/150‑1 (MQ=255)

                                                                                                                                  cAGGGGGCCAGTCT‑AGTGGCGAAGCATCCTCCCGTGTTTTAATTCTCATTGATGGTCAGGAGGTAACTTATCAGCGCGCCGGAGATAATTATGGTGTGGGACTGTTGATAGATGAGTCTGCGCTGGAGCGTGTTGAGGTAGTGAAAGGTc                >  1:2963280/1‑150 (MQ=255)

                                                                                                                                   aGGGGGCCAGTCT‑AGTGGCGAAGCATCCTCCCGTGTTTTAATTCTCATTGATGGTCAGGAGGTAACTTATCAGCGCGCCGGAGATAATTATGGTGTGGGACTGTTGATAGATGAGTCTGCGCTGGAGCGTGTTGAGGTAGTGAAAGGTcc               >  1:1027878/1‑150 (MQ=255)

                                                                                                                                      gggCCAGTCT‑AGTGGCGAAGCATCCTCCCGTGTTTTAATTCTCATTGATGGTCAGGAGGTAACTTATCAGCGCGCCGGAGATAATTATGGTGTGGGACTGTTGATAGATGAGTCTGCGCTGGAGCGTGTTGAGGTAGTGAAAGGTCCata            >  2:1165482/1‑150 (MQ=255)

                                                                                                                                         ccAGTCT‑AGTGGCGAAGCATCCTCCCGTGTTTTAATTCTCATTGATGGTCAGGAGGTAACTTATCAGCGCGCCGGAGATAATTATGGTGTGGGACTGTTGATAGATGAGTCTGCGCTGGAGCGTGTTGAGGTAGTGAAAGGTCCATATTc         <  2:376815/150‑1 (MQ=255)

                                                                                                                                            gTCT‑AGTGGCGAAGCATCCTCCCGTGTTTTAATTCTCATTGATGGTCAGGAGGTAACTTATCAGCGCGCCGGAGATAATTATGGTGTGGGACTGTTGATAGATGAGTCTGCGCTGGAGCGTGTTGAGGTAGTGAAAGGTCCATATTCCGt      >  2:4521375/1‑150 (MQ=255)

                                                                                                                                            gTCT‑AGTGGCGAAGCATCCTCCCGTGTTTTAATTCTCATTGATGGTCAGGAGGTAACTTATCAGCGCGCCGGAGATAATTATGGTGTGGGACTGTTGATAGATGAGTCTGCGCTGGAGCGTGTTGAGGTAGTGAAAGGTCCATATTCCGt      >  1:4700110/1‑150 (MQ=255)

                                                                                                                                             tCT‑AGTGGCGAAGCATCCTCCCGTGTTTTAATTCTCATTGATGGTCAGGAGGTAACTTATCAGCGCGCCGGAGATAATTATGGTGTGGGACTGTTGATAGATGAGTCTGCGCTGGAGCGTGTTGAGGTAGTGAAAGGTCCATATTCCGTa     >  2:581059/1‑150 (MQ=255)

                                                                                                                                              cT‑AGTGGCGAAGCATCCTCCCGTGTTTTAATTCTCATTGATGGTCAGGAGGTAACTTATCAGCGCGCCGGAGATAATTATGGTGTGGGACTGTTGATAGATGAGTCTGCGCTGGAGCGTGTGGAGGTAGTGAAAGGTCGATATTCCGTAc    >  2:3804521/1‑150 (MQ=255)

                                                                                                                                               t‑AGTGGatttgcccctatatttccagacatctgttatcacttaacccattacaagcccgctgccgcagatattcccgtggcgagcgataacccagcgcactatgcggatgccattcgttataatgctcgaacgcctctgcaaggttcttt   <  1:368090‑M1/150‑145 (MQ=255)

CTTTTCCTGTGTGGTACGCCGTCTGCGTTTCTCCGGCCCTAAGACATCAATCATCTGTTCTCCAATGACTAGTCTAAAAACTAGTATTAAGACTATCACTTATTTAAGTGATATTGGTTGTCTGGAGATTCAGGGGGCCAGTCT‑AGTGGCGAAGCATCCTCCCGTGTTTTAATTCTCATTGATGGTCAGGAGGTAACTTATCAGCGCGCCGGAGATAATTATGGTGTGGGACTGTTGATAGATGAGTCTGCGCTGGAGCGTGTTGAGGTAGTGAAAGGTCCATATTCCGTACTG  >  CP009273/2063608‑2063901

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 25 ≤` `ATCG/ATCG` `< 37 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.