New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? CP009273 = 2063752NA (NA)6 (0.020) 4/278 NT 2.3% noncoding (1/1331 nt) IS2 repeat region
?CP009273 2753865 = 260 (0.980)intergenic (+112/‑41) yfjI/yfjJ CP4‑57 prophage; uncharacterized protein/CP4‑57 prophage; uncharacterized protein
Rejected: Frequency below/above cutoff threshold.

Only 100 of 281 total aligned reads displayed.

AAACAAAAATAATAAACATAACTCATTGTGTTTTTTGATTTTAATGACAATCTAAAAGGACTTAATTTAAGAGTAAAAACAAACTCTAAACCCAGTTCGGATAAAAGCTTGTCATCTTGATAGGTAATATATAGGTACATAGACACATCAGAACGATCACTTACTCCAATATCATTGGCCAGGATACTATATGACATACGATAGTGAATTCGGATCACATGTATCCCTATATCGGGATAGAATCAAACAGGTTATTGATGACTCCCTAAACGAACATCTTAACTCAATGATTCTACG  >  CP009273/2753716‑2754012
                                                                                                                                                     |                                                                                                                                                   
aaaCAAAAATAATAAACATAACTCATTGTGTTTTTTGATTTTAATGACAATCTAAAAGGACTTAATTTAAGAGTAAAAACAAACTCTAAACCCAGTTCGGATAAAAGCTTGTCATCTTGATAGGTAATATATAGGTACATAGACACATCa                                                                                                                                                     >  2:461639/1‑150 (MQ=255)
    aaaaaTAATAAACATAACTCATTGTGTTTTTTGATTTTAATGACAATCTAAAAGGACTTAATTTAAGAGTAAAAACAAACTCTAAACCCAGTTCGGATAAAAGCTTGTCATCTTGATAGGTAATATATAGGTACATAGACACATCAGAAc                                                                                                                                                 <  2:3198097/150‑1 (MQ=255)
    aaaaaTAATAAACATAACTCATTGTGTTTTTTGATTTTAATGACAATCTAAAAGGACTTAATTTAAGAGTAAAAACAAACTCTAAACCCAGTTCGGATAAAAGCTTGTCATCTTGATAGGTAATATATAGGTACATAGACACATCAGAAc                                                                                                                                                 >  2:1971143/1‑150 (MQ=255)
      aaaTAATAAACATAACTCATTGTGTTTTTTGATTTTAATGACAATCTAAAAGGACTTAATTTAAGAGTAAAAACAAACTCTAAACCCAGTTCGGATAAAAGCTTGTCATCTTGATAGGTAATATATAGGTACATAGACACATCAGAACGa                                                                                                                                               >  2:3662158/1‑150 (MQ=255)
         taataaACATAACTCATTGTGTTTTTTGATTTTAATGACAATCTAAAAGGACTTAATTTAAGAGTAAAAACAAACTCTAAACCCAGTTCGGATAAAAGCTTGTCATCTTGATAGGTAATATATAGGTACATAGAAACATCAGAACGATCa                                                                                                                                            >  2:2846197/1‑150 (MQ=255)
          aataaACATAACTCATTGTGTTTTTTGATTTTAATGACAATCTAAAAGGACTTAATTTAAGAGTAAAAACAAACTCTAAACCCAGTTCGGATAAAAGCTTGTCATCTTGATAGGTAATATATAGGTACATAGACACATCAGAACGATCAc                                                                                                                                           >  1:407234/1‑150 (MQ=255)
          aataaACATAACTCATTGTGTTTTTTGATTTTAATGACAATCTAAAAGGACTTAATTTAAGAGTAAAAACAAACTCTAAACCCAGTTCGGATAAAAGCTTGTCATCTTGATAGGTAATATATAGGTACATAGACACATCAGAACGATCAc                                                                                                                                           <  1:4246254/150‑1 (MQ=255)
           ataaACATAACTCATTGTGTTTTTTGATTTTAATGACAATCTAAAAGGACTTAATTTAAGAGTAAAAACAAACTCTAAACCCAGTTCGGATAAAAGCTTGTCATCTTGATAGGTAATATATAGGTACATAGACACATCAGAACGATCACt                                                                                                                                          >  2:2320509/1‑150 (MQ=255)
            taaACATAACTCATTGTGTTTTTTGATTTTAATGACAATCTAAAAGGACTTAATTTAAGAGTAAAAACAAACTCTAAACCCAGTTCGGATAAAAGCTTGTCATCTTGATAGGTAATATATAGGTACATAGACACATCAGAACGATCACtt                                                                                                                                         >  1:4010769/1‑150 (MQ=255)
            taaACATAACTCATTGTGTTTTTTGATTTTAATGACAATCTAAAAGGACTTAATTTAAGAGTAAAAACAAACTCTAAACCCAGTTCGGATAAAAACTTGTCATCTTGATAGGTAATATATAGGTACATAGACACATCAGAACGATCACtt                                                                                                                                         <  1:719705/150‑1 (MQ=255)
              aaCATAACTCATTGTGTTTTTTGATTTTAATGACAATCTAAAAGGACTTAATTTAAGAGTAAAAACAAACTCTAAACCCAGTTCGGATAAAAGCTTGTCATCTTGATAGGTAATATATAGGTACATAGACACATCAGAACGATCACTTAc                                                                                                                                       >  1:4273577/1‑150 (MQ=255)
               aCATAACTCATTGTGTTTTTTGATTTTAATGACAATCTAAAAGGACTTAATTTAAGAGTAAAAACAAACTCTAAACCCAGTTCGGATAAAAGCTTGTCATCTTGATAGGTAATATATAGGTACATAGACACATCAGAACGATCACTTACt                                                                                                                                      <  2:349302/150‑1 (MQ=255)
                cATAACTCATTGTGTTTTTTGATTTTAATGACAATCTAAAAGGACTTAATTTAAGAGTAAAAACAAACTCTAAACCCAGTTCGGATAAAAGCTTGTCATCTTGATAGGTAATATATAGGTACATAGACACATCAGAACGATCACTTACTc                                                                                                                                     <  1:2997025/150‑1 (MQ=255)
                       cATTGTGTTTTTTGATTTTAATGACAATCTAAAAGGACTTAATTTAAGAGTAAAAACAAACTCTAAACCCAGTTCGGATAAAAGCTTGTCATCTTGATAGGTAATATATAGGTACATAGACACATCAGAACGATCACTTACTCCAATATc                                                                                                                              >  1:4095506/1‑150 (MQ=255)
                       cATTGTGTTTTTTGATTTTAATGACAATCTAAAAGGACTTAATTTAAGAGTAAAAACAAACTCTAAACCCAGTTCGGATAAAAGCTTGTCATCTTGATAGGTAATATATAGGTACATAGACACATCAGAACGATCACTTACTCCAAAATc                                                                                                                              >  1:3709231/1‑150 (MQ=255)
                        aTTGTGTTTTTTGATTTTAATGACAATCTAAAAGGACTTAATTTAAGAGTAAAAACAAACTCTAAACCCAGTTCGGATAAAAGCTTGTCATCTTGATAGGTAATATATAGGTACATAGACACATCAGAACGATCACTTACTCCAATATCa                                                                                                                             >  1:4590939/1‑150 (MQ=255)
                        aTTGTGTTTTTTGATTTTAATGACAATCTAAAAGGACTTAATTTAAGAGTAAAAACAAACTCTAAACCCAGTTCGGATAAAAGCTTGTCATCTTGATAGGTAATATATAGGTACATAGACACATCAGAACGATCACTTACTCCAATATCa                                                                                                                             >  2:514680/1‑150 (MQ=255)
                        aTTGTGTTTTTTGATTTTAATGACAATCTAAAAGGACTTAATTTAAGAGTAAAAACAAACTCTAAACCCAGTTCGGATAAAAGCTTGTCATCTTGATAGGTAATATATAGGTACATAGACACATCAGAACGATCACTTACTCCAATATCa                                                                                                                             >  1:1170743/1‑150 (MQ=255)
                        aTTGTGTTTTTTGATTTTAATGACAATCTAAAAGGACTTAATTTAAGAGTAAAAACAAACTCTAAACCCAGTTCGGATAAAAGCTTGTCATCTTGATAGGTAATATATAGGTACATAGACACATCAGAACGATCACTTACTCCAATATCa                                                                                                                             >  2:4495064/1‑150 (MQ=255)
                        aTTGTGTTTTTTGATTTTAATGACAATCTAAAAGGACTTAATTTAAGAGTAAAAACAAACTCTAAACCCAGTTCGGATAAAAGCTTGTCATCTTGATAGGTAATATATAGGTACATAGACACATCAGAACGATCACTTACTCCAATATCa                                                                                                                             >  2:3018901/1‑150 (MQ=255)
                           gtgtTTTTTGATTTTAATGACAATCTAAAAGGACTTAATTTAAGAGTAAAAACAAACTCTAAACCCAGTTCGGATAAAAGCTTGTCATCTTGATAGGTAATATATAGGTACATAGACACATCAGAACGATCACTTACTCCAATATCATTg                                                                                                                          >  1:4397849/1‑150 (MQ=255)
                             gtTTTTTGATTTTAATGACAATCTAAAAGGACTTAATTTAAGAGTAAAAACAAACTCTAAACCCAGTTCGGATAAAAGCTTGTCATCTTGATAGGTAATATATAGGTACATAGACACATCAGAACGATCACTTACTCCAATATCATTGGc                                                                                                                        >  2:2736236/1‑150 (MQ=255)
                             gtTTTTTGATTTTAATGACAATCTAAAAGGACTTAATTTAAGAGTAAAAACAAACTCTAAACCCAGTTCGGATAAAAGCTTGTCATCTTGATAGGTAATATATAGGTACATAGACACATCAGAACGATCACTTACTCCAATATCATTGGc                                                                                                                        >  2:2736444/1‑150 (MQ=255)
                             gtTTTTTGATTTTAATGACAATCTAAAAGGACTTAATTTAAGAGTAAAAACAAACTCTAAACCCAGTTCGGATAAAAGCTTGTCATCTTGATAGGTAATATATAGGTACATAGACACATCAGAACGATCACTTACTCCAATATCATTGGc                                                                                                                        >  2:3891009/1‑150 (MQ=255)
                                 tttGATTTTAATGACAATCTAAAAGGACTTAATTTAAGAGTAAAAACAAACTCTAAACCCAGTTCGGATAAAAGCTTGTCATCTTGATAGGTAATATATAGGTACATAGACACATCAGAACGATCACTTACTCCAATATCATTGGCCAgg                                                                                                                    <  2:3228289/150‑1 (MQ=255)
                                  ttGATTTTAATGACAATCTAAAAGGACTTAATTTAAGAGTAAAAACAAACTCTAAACCCAGTTCGGATAAAAGCTTGTCATCTTGATAGGTAATATATAGGTACATAGACACATCAGAACGATCACTTACTCCAATATCATTGGCCAGGa                                                                                                                   <  2:569664/150‑1 (MQ=255)
                                   tGATTTTAATGACAATCTAAAAGGACTTAATTTAAGAGTAAAAACAAACTCTAAACCCAGTTCGGATAAAAGCTTGTCATCTTGATAGGTAATATATAGGTACATAGACACATCAGAACGATCACTTACTCCAATATCATTGGCCAGGAt                                                                                                                  <  2:2901315/150‑1 (MQ=255)
                                   tGATTTTAATGACAATCTAAAAGGACTTAATTTAAGAGTAAAAACAAACTCTAAACCCAGTTCGGATAAAAGCTTGTCATCTTGATAGGTAATATATAGGTACATAGACACATCAGAACGATCACTTACTCCAATATCATTGGCCAGGAt                                                                                                                  <  1:3539099/150‑1 (MQ=255)
                                     aTTTTAATGACAATCTAAAAGGACTTAATTTAAGAGTAAAAACAAACTCTAAACCCAGTTCGGATAAAAGCTTGTCATCTTGATAGGTAATATATAGGTACATAGACACATCAGAACGATCACTTACTCCAATATCATTGGCCAGGATAc                                                                                                                >  2:2221186/1‑150 (MQ=255)
                                     aTTTTAATGACAATCTAAAAGGACTTAATTTAAGAGTAAAAACAAACTCTAAACCCAGTTCGGATAAAAGCTTGTCATCTTGATAGGTAATATATAGGTACATAGACACATCAGAACGATCACTTACTCCAATATCATTGGCCAGGATAc                                                                                                                <  2:1002592/150‑1 (MQ=255)
                                      ttttAATGACAATCTAAAAGGACTTAATTTAAGAGTAAAAACAAACTCTAAACCCAGTTCGGATAAAAGCTTGTCATCTTGATAGGTAATATATAGGTACATAGACACATCAGAACGTTCACTTACTCCAATATCATTGGCCAGGATACt                                                                                                               <  2:3442663/150‑1 (MQ=255)
                                       tttAATGACAATCTAAAAGGACTTAATTTAAGAGTAAAAACAAACTCTAAACCCAGTTCGGATAAAAGCTTGTCATCTTGATAGGTAATATATAGGTACATAGACACATCAGAACGATCACTTACTCCAATATCATTGGCCAGGATACta                                                                                                              >  1:357708/1‑150 (MQ=255)
                                         tAATGACAATCTAAAAGGACTTAATTTAAGAGTAAAAACAAACTCTAAACCCAGTTCGGATAAAAGCTTGTCATCTTGATAGGTAATATATAGGTACATAGACACATCAGAACGATCACTTACTCCAATATCATTGGCCAGGATACtata                                                                                                            <  1:1801437/150‑1 (MQ=255)
                                          aaTGACAATCTAAAAGGACTTAATTTAAGAGTAAAAACAAACTCTAAACCCAGTTCGGATAAAAGCTTGTCATCTTGATAGGTAATATATAGGTACATAGACACATCAGAACGATCACTTACTCCAATATCATTGGCCAGGATACTatat                                                                                                           >  1:2482488/1‑150 (MQ=255)
                                               cAATCTAAAAGGACTTAATTTAAGAGTAAAAACAAACTCTAAACCCAGTTCGGATAAAAGCTTGTCATCTTGATAGGTAATATATAGGTACATAGACACATCAGAACGATCACTTACTCCAATATCATTGGCCAGGATACTATATGACAt                                                                                                      <  1:2705218/150‑1 (MQ=255)
                                               cAATCTAAAAGGACTTAATTTAAGAGTAAAAACAAACTCTAAACCCAGTTCGGATAAAAGCTTGTCATCTTGATAGGTAATATATAGGTACATAGACACATCAGAACGATCACTTACTCCAATATCATTGGCCAGGATACTATATGACAt                                                                                                      >  1:2254606/1‑150 (MQ=255)
                                               cAATCTAAAAGGACTTAATTTAAGAGTAAAAACAAACTCTAAACCCAGTTCGGATAAAAGCTTGTCATCTTGATAGGTAATATATAGGTACATAGACACATCAGAACGATCACTTACTCCAATATCATTGGCCAGGATACTATATGACAt                                                                                                      <  1:3893441/150‑1 (MQ=255)
                                                 aTCTAAAAGGACTTAATTTAAGAGTAAAAACAAACTCTAAACCCAGTTCGGATAAAAGCTTGTCATCTTGATAGGTAATATATAGGTACATAGACACATCAGAACGATCACTTACTCCAATATCATTGGCCAGGATACTATATGACATAc                                                                                                    >  1:2879994/1‑150 (MQ=255)
                                                   cTAAAAGGACTTAATTTAAGAGTAAAAACAAACTCTAAACCCAGTTCGGATAAAAGCTTGTCATCTTGATAGGTAATATATAGGTACATAGACACATCAGAACGATCACTTACTCCAATATCATTGGCCAGGATACTATATGACATACGa                                                                                                  <  2:2593836/150‑1 (MQ=255)
                                                    tAAAAGTACTTAATTTAAGAGTAAAAACAAACTCTAAACCCAGTTCGGATAAAAGCTTGTCATCTTGATAGGTAATATATAGGTACATAGACACATCAGAACGATCACTTACTCCAATATCATTGGCCAGGATACTATATGACATACGAt                                                                                                 <  1:2922484/150‑1 (MQ=255)
                                                    aaaaaGGACTTAATTTAAGAGTAAAAACAAACTCTAAACCCAGTTCGGATAAAAGCTTGTCATCTTGATAGGTAATATATAGGTACATAGACACATCAGAACGATCACTTACTCCAATATCATTGGCCAGGATACTATATGACATACGAt                                                                                                 >  1:2581104/2‑150 (MQ=255)
                                                     aaaaGGACTTAATTTAAGAGTAAAAACAAACTCTAAACCCAGTTCGGATAAAAGCTTGTCATCTTGATAGGTAATATATAGGTACATAGACACATCAGAACGATCACTTACTCCAATATCATTGGCCAGGATACTATATGACATACGATa                                                                                                <  2:1026826/150‑1 (MQ=255)
                                                       aaGGACTTAATTTAAGAGTAAAAACAAACTCTAAACCCAGTTCGGATAAAAGCTTGTCATCTTGATAGGTAATATATAGGTACATAGACACATCAGAACGATCACTTACTCCAATATCATTGGCCAGGATACTATATGACATACGATAGt                                                                                              <  1:4524470/150‑1 (MQ=255)
                                                        aGGACTTAATTTAAGAGTAAAAACAAACTCTAAACCCAGTTCGGATAAAAGCTTGTCATCTTGATAGGTAATATATAGGTACATAGACACATCAGAACGATCACTTACTCCAATATCAGTGGCCAGGATACTATATGACATACGATAGTg                                                                                             >  2:1718895/1‑150 (MQ=255)
                                                          gACTTAATTTAAGAGTAAAAACAAACTCTAAACCCAGTTCGGATAAAAGCTTGTCATCTTGATAGGTAATATATAGGTACATAGACACATCAGAACGATCACTTACTCCAATATCATTGGCCAGGATACTATATGACATACGATAGTGaa                                                                                           <  1:3952342/150‑1 (MQ=255)
                                                           aCTTAATTTAAGAGTAAAAACAAACTCTAAACCCAGTTCGGATAAAAGCTTGTCATCTTGATAGGTAATATATAGGTACATAGACACATCAGAACGATCACTTACTCCAATATCATTGGCCAGGATACTATATGACATACGATAGTGAAt                                                                                          >  2:2232479/1‑150 (MQ=255)
                                                           aCTTAATTTAAGAGTAAAAACAAACTCTAAACCCAGTTCGGATAAAAGCTTGTCATCTTGATAGGTAATATATAGGTACATAGACACATCAGAACGATCACTTACTCCAATATCATTGGCCAGGATACTATATGACATACGATAGTGAAt                                                                                          >  2:4395230/1‑150 (MQ=255)
                                                           aCTGAATTTAAGAGTAAAAACAAACTCTAAACCCAGTTCGGATAAAAGCTTGTCATCTTGATAGGTAATATATAGGTACATAGACACATCAGAACGATCACTTACTCCAATATCATTGGCCAGGATACTATATGACATACGATAGTGAAt                                                                                          <  2:2791000/150‑1 (MQ=255)
                                                            cTTAATTTAAGAGTAAAAACAAACTCTAAACCCTGTTCGGATAAAAGCTTGTCATCTTGATAGGTAATATATAGGTACATAGACACATCAGAACGATCACTTACTCCAATATCATTGGCCAGGATACTATATGACATACGATAGTGAAtt                                                                                         <  2:48496/150‑1 (MQ=255)
                                                              tAATTTAAGAGTAAAAACAAACTCTAAACCCAGTTCGGATAAAAGCTTGTCATCTTGATAGGTAATATATAGGTACATAGACACATCAGAACGATCACTTACTCCAATATCATTGGCCAGGATACTATATGACATACGATAGTGAATTCg                                                                                       >  2:4298035/1‑150 (MQ=255)
                                                                aTTTAAGAGTAAAAACAAACTCTAAACCCAGTTCGGATAAAAGCTTGTCATCTTGATAGGTAATATATAGGTACGTAGACACATCAGAACGATCACTTACTCCAATATCATTGGCCAGGATACTATATGACATACGATAGTGAATTCGGa                                                                                     >  2:3730768/1‑150 (MQ=255)
                                                                      gagTAAAAACAAACTCTAAACCCAGTTCGGATAAAAGCTTGTCATCTTGATAGGTAATATATAGGTACATAGACACATCAGAACGATCACTTACTCCAATATCATTGGCCAGGATACTATATGACATACGATAGTGAATTCGGATCACAt                                                                               <  1:3339115/150‑1 (MQ=255)
                                                                       agTAAAAACAAACTCTAAACCCAGTTCGGATAAAAGCTTGTCATCTTGATAGGTAATATATAGGTACATAGACACATCAGAACGATCACTTACTCCAATATCATTGGCCAGGATACTATATGACATACGATAGTGAATTCGGATCACATg                                                                              <  2:1152319/150‑1 (MQ=255)
                                                                        gTAAAAACAAACTCTAAACCCAGTTCGGATAAAAGCTTGTCATCTTGATAGGTAATATATAGGTACATAGACACATCAGAACGATCACTTACTCCAATATCATTGGCCAGGATACTATATGACATACGATAGTGAATTCGGATCACATGt                                                                             >  2:4033200/1‑150 (MQ=255)
                                                                        gTAAAAACAAACTCTAAACCCAGTTCGGATAAAAGCTTGTCATCTTGATAGGTAATATATAGGTACATAGACACATCAGAACGATCACTTACTCCAATATCATTGGCCAGGATACTATATGACATACGATAGTGAATTCGGATCACATGt                                                                             >  2:1703570/1‑150 (MQ=255)
                                                                          aaaaaCAAACTCTAAACCCAGTTCGGATAAAAGCTTGTCATCTTGATAGGTAATATATAGGTACATAGACACATCAGAACGATCACTTACTCCAATATCATTGGCCAGGATACTATATGACATACGATAGTGAATTCGGATCACATGTAt                                                                           <  1:3136687/150‑1 (MQ=255)
                                                                          aaaaaCAAACTCTAAACCCAGTTCGGATAAAAGCTTGTCATCTTGATAGGTAATATATAGGTACATAGACACATCAGAACGATCACTTACTCCAATATCATTGGCCAGGATACTATATGACATACGATAGTGAATTCGGATCACATGTAt                                                                           <  2:1945217/150‑1 (MQ=255)
                                                                          aaaaaCAAACTCTAAACCCAGTTCGGATAAAAGCTTGTCATCTTGATAGGTAATATATAGGTACATAGACACATCAGAACGATCACTTACTCCAATATCATTGGCCAGGATACTATATGACATACGATAGTGAATTCGGATCACATGTAt                                                                           <  2:685225/150‑1 (MQ=255)
                                                                          aaaaaCAAACTCTAAACCCAGTTCGGATAAAAGCTTGTCATCTTGATAGGTAATATATAGGTACATAGACACATCAGAACGATCACTTACTCCAATATCATTGGCCAGGATACTATATGACATACGATAGTGAATTCGGATCACATGTAt                                                                           >  1:4197653/1‑150 (MQ=255)
                                                                            tctaaaaactagtattaagactatcacttatttaagtgatattggttgtctggagattcagggggccagtctaAGAACGATCACTTACTCCAATATCATTGGCCAGGATACTATATGACATACGATAGTGAATTCGGATCACATGTATcc                                                                         <  1:1559787‑M2/77‑1 (MQ=255)
                                                                               caaacTCTAAACCCAGTTCGGATAAAAGCTTGTCATCTTGATAGGTAATATATAGGTACATAGACACATCAGAACGATCACTTACTCCAATATCATTGGCCAGGATACTATATGACATACGATAGTGAATTCGGATCACATGTATCCCta                                                                      <  2:407234/150‑1 (MQ=255)
                                                                                 aacTCTAAACCCAGTTCGGATAAAAGCTTGTCATCTTGATAGGTAATATATAGGTACATAGACACATCAGAACGATCACTTACTCCAATATCATTGGCCAGGATACTATATGACATACGATAGTGAATTCGGATCACATGTATCCCtata                                                                    >  2:2378547/1‑150 (MQ=255)
                                                                                    tctAAACCCAGTTCGGATAAAAGCTTGTCATCTTGATAGGTAATATATAGGTACATAGACACATCAGAACGATCACTTACTCCAATATCATTGGCCAGGATACTATATGACATACGATAGTGAATTCGGATCACATGTATCCCTATATCg                                                                 <  1:3427954/150‑1 (MQ=255)
                                                                                     ctAAACCCAGTTCGGATAAAAGCTTGTCATCTTGATAGGTAATATATAGGTACATAGACACATCAGAACGATCACTTACTCCAATATCATTGGCCAGGATACTATATGACATACGATAGTGAATTCGGATCACATGTATCCCTATATCgg                                                                <  1:209589/150‑1 (MQ=255)
                                                                                     ctAAACCCAGTTCGGATAAAAGCTTGTCATCTTGATAGGTAATATATAGGTACATAGACACATCAGAACGATCACTTACTCCAATATCATTGGCCAGGATACTATATGACATACGATAGTGAATTCGGATCACATGTATCCCTATATCgg                                                                <  1:203236/150‑1 (MQ=255)
                                                                                        aaCCCAGTTCGGATAAAAGCTTGTCATCTTGATAGGTAATATATAGGTACATAGACACATCAGAACGATCACTTACTCCAATATCATTGGCCAGGATACTATATGACATACGATAGTGAATTCGGATCACATGTATCCCTATATCGGGAt                                                             <  1:1919314/150‑1 (MQ=255)
                                                                                          cccAGTTCGGATAAAAGCTTGTCATCTTGATAGGTAATATATAGGTACATAGACACATCAGAACGATCACTTACTCCAATATCATTGGCCAGGATACTATATGACATACGATAGTGAATTCGGATCACATGTATCCCTATATCGGGATAg                                                           >  1:2980179/1‑150 (MQ=255)
                                                                                          cccAGTTCGGATAAAAGCTTGTCATCTTGATAGGTAATATATAGGTACATAGACACATCAGAACGATCACTTACTCCAATATCATTGGCCAGGATACTATATGACATACGATAGTGAATTCGGATCACATGTATCCCTATATCGGGATAg                                                           >  1:2429325/1‑150 (MQ=255)
                                                                                            cAGTTCGGATAAAAGCTTGTCATCTTGATAGGTAATATATAGGTACATAGACACATCAGAACGATCACTTACTCCAATATCATTGGCCAGGATACTATATGACATACGATAGTGAATTCGGATCACATGTATCCCTATATCGGGATAGaa                                                         >  2:868007/1‑150 (MQ=255)
                                                                                            cAGTTCGGATAAAAGCTTGTCATCTTGATAGGTAATATATAGGTACATAGACACATCAGAACGATCACTTACTCCAATATCATTGGCCAGGATACTATATGACATACGATAGTGAATTCGGATCACATGTATCCCTATATCGGGATAGaa                                                         <  1:4010105/150‑1 (MQ=255)
                                                                                             aGTTCGGATAAAAGCTTGTCATCTTGATAGGTAATATATAGGTACATAGACACATCAGAACGATCACTTACTCCAATATCATTGGCCAGGATACTATATGACATACGATAGTGAATTCGGATCACATGTATCCCTATATCGGGATAGAAt                                                        >  2:3568803/1‑150 (MQ=255)
                                                                                              gTTCGGATAAAAGCTTGTCATCTTGATAGGTAATATATAGGTACATAGACACATCAGAACGATCACTTACTCCAATATCATTGGCCAGGATACTATATGACATACGATAGTGAATTCGGATCACATGTATCCCTATATCGGGATAGAATc                                                       <  1:4503376/150‑1 (MQ=255)
                                                                                                  ggATAAAAGCTTGTCATCTTGATAGGTAATATATAGGTACATAGACACATCAGAACGATCACTTACTCCAATATCATTGTCCAGGATACTATATGACATACGATAGTGAATTCGGATCACATGTATCCCTATATCGGGATAGAATCAAAc                                                   >  1:1645632/1‑150 (MQ=255)
                                                                                                   gATAAAAGCTTGTCATCTTGATAGGTAATATATAGGTACATAGACACATCAGAACGATCACTTACTCCAATATCATTGGCCAGGATACTATATGACATACGATAGTGAATTCGGATCACATGTATCCCTATATCGGGATAGAATCAAACa                                                  <  2:1802829/150‑1 (MQ=255)
                                                                                                    cacttatttaagtgatattggttgtctggagattcagggggccagtctaAGAACGATCACTTACTCCAATATCATTGGCCAGGATACTCTATGACATACGATAGTGAATTCGGATCACATGTATCCCTATATCGGGATAGAATCAAACAg                                                 >  2:2421535‑M2/50‑150 (MQ=255)
                                                                                                     tAAAAGCTTGTCATCTTGATAGGTAATTTATAGGTACATAGACACATCAGAAAGATCACTTACTCCAATATGATTGGCCAGGATACTATATGACATACGATAGTGAATTCGGATCACATGTATCCCTATATCGGGATAGAATCAAACAgg                                                <  1:1014705/150‑1 (MQ=255)
                                                                                                      aaaaGCTTGTCATCTTGATAGGTAATATATAGGTACATAGACACATCAGAACGATCACTTACTCCAATATCATTGGCCAGGATACTATATGACATACGATAGTGAATTCGGATCACATGTATCCCTATATCGGGATAGAATCAAACAGGt                                               >  2:2967595/1‑150 (MQ=255)
                                                                                                        aaGCTTGTCATCTTGATAGGTAATATATAGGTACATAGACACATCAGAACGATCACTTACTCCAATATCATTGGCCAGGATACTATATGACATACGATAGTGAATTCGGATCACATGTATCCCTATATCGGGATAGAATCAAACAGGTTa                                             >  2:1226025/1‑150 (MQ=255)
                                                                                                         aGCTTGTCATCTTGATAGGTAATATATAGGTACATAGACACATCAGAACGATCACTTACTCCAATATCATTGGCCAGGATACTATATGACATACGATAGTGAATTCGGATCACATGTATCCCTATATCGGGATAGAATCAAACAGGTTAt                                            >  1:81841/1‑150 (MQ=255)
                                                                                                           cTTGTCATCTTGATAGGTAATATATAGGTACATAGACACATCAGAACGATCACTTACTCCAATATCATTGGCCAGGATACTATATGACATACGATAGTGAATTCGGATCACATGTATCCCTATATCGGGATAGAATCAAACAGGTTATtg                                          >  1:1349989/1‑150 (MQ=255)
                                                                                                             tGTCATCTTGATAGGTAATATATAGGTACATAGACACATCAGAACGATCACTTACTCCAATATCATTGGCCAGGATACTATATGACATACGATAGTGAATTCGGATCACATGTATCCCTATATCGGGATAGAATCAAACAGGTTATtgat                                        <  2:4273577/150‑1 (MQ=255)
                                                                                                              gTCATCTTGATAGGTAATATATAGGTACATAGACACATCAGAACGATCACTTACTCCAATATCATTGGCCAGGATACTATATGACATACGATAGTGAATTCGGATCACATGTATCCCTATATCGGGATAGAATCAAACAGGTTATtgatg                                       >  2:3918113/1‑150 (MQ=255)
                                                                                                               tCATCTTGATAGGTAATATATAGGTACATAGACACATCAGAACGATCACTTACTCCAATATCATTGGCCAGGATACTATATGACATACGATAGTGAATTCGGATCACATGTATCCCTATATCGGGATAGAATCAAACAGGTTATtgatga                                      <  2:928761/150‑1 (MQ=255)
                                                                                                                cATCTTGATAGGTAATATATAGGTACATAGACACATCAGAACGATCACTTACTCCAATATCATTGGCCAGGATACTATATGACATACGATAGTGAATTCGGATCACATGTATCCCTATATCGGGATAGAATCAAACAGGTTATTGATGAc                                     <  2:230435/150‑1 (MQ=255)
                                                                                                                cATCTTGATAGGTAATATATAGGTACATAGACACATCAGAACGATCACTTACTCCAATATCATTGGCCAGGATACTATATGACATACGATAGTGAATTCGGATCACATGTATCCCTATATCGGGATAGAATCAAACAGGTTATTGATGAc                                     >  2:4561717/1‑150 (MQ=255)
                                                                                                                 aTCTTGATAGGTAATATATAGGTACATAGACACATCAGAACGATCACTTACTCCAATATCATTGGCCAGGATACTATATGACATACGATAGTGAATTCGGATCACATGTATCCCTATATCGGGATAGAATCAAACAGGTTATTGATGACt                                    <  1:579485/150‑1 (MQ=255)
                                                                                                                      gATAGGTAATATATAGGTACATAGACACATCAGAACGATCACTTACTCCAATATCATTGGCCAGGATACTATATGACATACGATAGTGAATTCGGATCACATGTATCCCTATATCGGGATAGAATCAAACAGGTTATTGATGACTCCCTa                               <  1:1103394/150‑1 (MQ=255)
                                                                                                                      gATAGGTAATATATAGGTACATAGACACATCAGAACGATCACTTACTCCAATATCATTGGCCAGGATACTATATGACATACGATAGTGAATTCGGATCACATGTATCCCTATATCGGGATAGAATCAAACAGGTTATTGATGACTCCCTa                               >  2:1655855/1‑150 (MQ=255)
                                                                                                                       aTAGGTAATATATAGGTACATAGACACATCAGAACGATCACTTACTCCAATATCATTGGCCAGGATACTATATGACATACGATAGTGAATTCGGATCACATGTATCCCTATATCGGGATAGAATCAAACAGGTTATTGATGACTCCCTaa                              <  2:1613697/150‑1 (MQ=255)
                                                                                                                        tAGGTAATATATAGGTACATAGACACATCAGAACGATCACTTACTCCAATATCATTGGCCAGGATACTATATGACATACGATAGTGAATTCGGATCACATGTATCCCTATATCGGGATAGAATCAAACAGGTTATTGATGACTCCCTaaa                             <  1:1447620/150‑1 (MQ=255)
                                                                                                                              atatatAGGTACATAGACACATCAGAACGATCACTTACTCCAATATCATTGGCCAGGATACTATATGACATACGATAGTGAATTCGGATCACATGTATCCCTATATCGGGATAGAATCAAACAGGTTATTGATGACTCCCTAAACGAACa                       >  2:2659968/1‑150 (MQ=255)
                                                                                                                              atatatAGGTACATAGACACATCAGAACGATCACTTACTCCAATATCATTGGCCAGGATACTATATGACATACGATAGTGAATTCGGATCACATGTATCCCTATATCGGGATAGAATCAAACAGGTTATTGATGACTCCCTAAACGAACa                       <  1:2780011/150‑1 (MQ=255)
                                                                                                                              atatatAGGTACATAGACACATCAGAACGATCACTTACTCCAATATCATTGGCCAGGATACTATATGACATACGATAGTGAATTCGGATCACATGTATCCCTATATCGGGATAGAATCAAACAGGTTATTGATGACTCCCTAAACGAACa                       >  1:2264651/1‑150 (MQ=255)
                                                                                                                               tatataGGTACATAGACACATCAGAACGATCACTTACTCCAATATCATTGGCCAGGATACTATATGACATACGATAGTGAATTCGGATCACATGTATCCCTATATCGGGATAGAATCAAACAGGTTATTGATGACTCCCTAAACGAACAt                      <  2:463579/150‑1 (MQ=255)
                                                                                                                                  ataGGTACATAGACACATCAGAACGATCACTTACTCCAATATCATTGGCCAGGATACTATATGACATACGATAGTGAATTCGGATCACATGTATCCCTATATCGGGATAGAATCAAACAGGTTATTGATGACTCCCTAAACGAACATCtt                   >  1:463970/1‑150 (MQ=255)
                                                                                                                                     ggTACATAGACACATCAGAACGATCACTTACTCCAATATCATTGGCCAGGATACTATATGACATACGATAGTGAATTCGGATCACATGTATCCCTATATCGGGATAGAATCAAACAGGTTATTGATGACTCCCTAAACGAACATCTTAAc                <  2:181327/150‑1 (MQ=255)
                                                                                                                                      gTACATAGACACATCAGAACGATCACTTACTCCAATATCATTGGCCAGGATACTATATGACATACGATAGTGAATTCGGATCACATGTATCCCTATATCGGGATAGAATCAAACAGGTTATTGATGACTCCCTAAACGAACATCTTAACt               >  1:2614523/1‑150 (MQ=255)
                                                                                                                                        aCATAGACACATCAGAACGATCACTTACTCCAATATCATTGGCCAGGATACTATATGACATACGATAGTGAATTCGGATCACATGTATCCCTATATCGGGATAGAATCAAACAGGTTATTGATGACTCCCTAAACGAACATCTTAACTCa             <  2:1851014/150‑1 (MQ=255)
                                                                                                                                         cATAGACACATCAGAACGATCACTTACTCCAATATCATTGGCCAGGATACTATATGACATACGATAGTGAATTCGGATCACATGTATCCCTATATCGGGATAGAATCAAACAGGTTATTGATGACTCCCTAAACGAACATCTTAACTCaa            >  2:204646/1‑150 (MQ=255)
                                                                                                                                               cacaTCAGAACGATCACTTACTCCAATATCATTGGCCAGGATACTATATGACATACGATAGTGAATTCGGATCACATGTATCCCTATATCGGGATAGAATCAAACAGGTTATTGATGACTCCCTAAACGAACATCTTAACTCAATGATTc      >  2:3874366/1‑150 (MQ=255)
                                                                                                                                                     |                                                                                                                                                   
AAACAAAAATAATAAACATAACTCATTGTGTTTTTTGATTTTAATGACAATCTAAAAGGACTTAATTTAAGAGTAAAAACAAACTCTAAACCCAGTTCGGATAAAAGCTTGTCATCTTGATAGGTAATATATAGGTACATAGACACATCAGAACGATCACTTACTCCAATATCATTGGCCAGGATACTATATGACATACGATAGTGAATTCGGATCACATGTATCCCTATATCGGGATAGAATCAAACAGGTTATTGATGACTCCCTAAACGAACATCTTAACTCAATGATTCTACG  >  CP009273/2753716‑2754012

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.