| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| JC | CP009273 | 3,841,409 | +CAACCAG | 93.4% | coding (576/1320 nt) | uhpC ← | membrane protein regulates uhpT expression |
| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | CP009273 | = 3841409 | 16 (0.060) | 225 (0.850) +CAACCAG |
120/242 | NT | 93.4% | coding (576/1320 nt) | uhpC | membrane protein regulates uhpT expression |
| ? | CP009273 | 3841410 = | 16 (0.060) | coding (575/1320 nt) | uhpC | membrane protein regulates uhpT expression | |||||
Only 100 of 275 total aligned reads displayed.
GGATCTCTTTACGCGTCAACCCTGCCCCTTCTTGTTGTTGAGCAATTTCCAGCGCGTCGTGTCGCCATTCACCGACCGCCGGTAAACCTAACGCCTGCGGGCGATCGCGTAGCCGCCAGCAGAGAAAAATCCCCACGACTATCGCCATACAACCAGCAATCATCATCCCGGCACGCCAGCCGTAATGCAGCGCAGCCGCTGCCATCACAATGGGAATGAGTGCGCCGCCGACGTTATGCGCCGTGTTCCATAATGCCCACCAACCGCCGCGCTCGGTACGTGAATACCAGGCCGTT > CP009273/3841261‑3841556 | ggATCTCTTTACGCGTCAACCCTGCCCCTTCTTGTTGTTGAGCAATTTCCAGCGCGTCGTGTCGCCATTCACCGACCGCCGGTAAACCTAACGCCTGCGGGCGATCGCGTAGCCGCCAGCAGAGAAAAATCCCCACGACTATCGCCATa < 2:1794290/149‑1 (MQ=255) tctcTTTACGCGTCAACCCTGCCCCTTCTTGTTGTTGAGCAATTTCCAGCGCGTCGTGTCGCCATTCACCGACCGCCGGTAAACCTAACGCCTGCGGGCGATCGCGTAGCCGCCAGCAGAGAAAAATCCCCACGACTATCGCCATAcaa > 2:2895784‑M1/1‑146 (MQ=255) tctTTACGCGTCAACCCTGCCCCTTCTTGTTGTTGAGCAATTTCCAGCGCGTCGTGTCGCCATTCACCGACCGCCGGTAAACCTAACGCCTGCGGGCGATCGCGTAGCCGCCAGCAGAGAAAAATCCCCACGACTATCGCCATAcaacc < 2:3802674‑M1/149‑6 (MQ=255) tctTTACGCGTCAACCCTGCCCCTTCTTGTTGTTGAGCAATTTCCAGCGCGTCGTGTCGCCATTCACCGACCGCCGGTAAACCTAACGCCTGCGGGCGATCGCGTAGCCGCCAGCAGAGAAAAATCCCCACGACTATCGCCATAcaacc < 2:3832676‑M1/149‑6 (MQ=255) ctTTACGCGTCAACCCTGCCCCTTCTTGTTGTTGAGCAATTTCCAGCGCGTCGTGTCGCCATTCACCGACCGCCGGTAAACCTAACGCCTGCGGGCGATCGCGTAGCCGCCAGCAGAGAAAAATCCCCACGACTATCGCCATAcaacca > 1:1328616‑M1/1‑143 (MQ=255) tttACGCGTCAACCCTGCCCCTTCTTGTTGTTGAGCAATTTCCAGCGCGTCGTGTCGCCATTCACCGACCGCCGGTAAACCTAACGCCTGCGGGCGATCGCGTAGCCGCCAGCAGAGAAAAATCCCCACGACTATCGCCATAcaaccag > 2:505697‑M1/1‑142 (MQ=255) ttACGCGTCAACCCTGCCCCTTCTTGTTGTTGAGCAATTTCCAGCGCGTCGTGTCGCCATTCACCGACCGCCGGTAAACCTAATGCCTGCGGGCGATCGCGTAGCCGCCAGCAGAGAAAAATCCCCACGACTATCGCCATAcaaccagc < 2:482768‑M1/149‑9 (MQ=255) ttACGCGTCAACCCTGCCCCTTCTTGTTGTTGAGCAATTTCCAGCGCGTCGTGTCGCCATTCACCGACCGCCGGTAAACCTAACGCCTGCGGGCGATCGCGTAGCCGCCAGCAGAGAAAAATCCCCACGACTATCGCCATAcaaccagc < 2:3939924‑M1/149‑9 (MQ=255) aCGCGTCAACCCTGCCCCTTCTTGTTGTTGAGCATTTTCCAGCGCGTCGTGTCGCCATTCACCGACCGCCGGTAAACCTAACGCCTGCGGGCGATCGCGTAGCCGCCAGCAGAGAAAAATCCCCACGACTATCGCCATAcaaccagcaa < 1:2397815‑M1/149‑11 (MQ=255) cgcgTCAACCCTGCCCCTTCTTGTTGTTGAGCAATTTCCAGCGCGTCGTGTCGCCATTCACCGACCGCCGGTAAACCTAACGCCTGCGGGCGATCGCGTAGCCGCCAGCAGAGAAAAATCCCCACGACTATCGCCATAcaaccagcaac < 1:4717483‑M1/149‑12 (MQ=255) gTCAACCCTGCCCCTTCTTGTTGTTGAGCAATTTCCAGCGCGTCGTGTCGCCATTCACCGACCGCCGGTAAACCTAACGCCTGCGGGCGATCGCGTAGCCGCCAGCAGAGAAAAATCCCCACGACTATCGCCATAcaaccagcaaccag < 1:2776610‑M1/149‑15 (MQ=255) gTCAACCCTGCCCCTTCTTGTTGTTGAGCAATTTCCAGCGCGTCGTGTCGCCATTCACCGACCGCCGGTAAACCTAACGCCTGCGGGCGATCGCGTAGCCGCCAGCAGAGAAAAATCCCCACGACTATCGCCATAcaaccagcaaccag < 1:1600675‑M1/149‑15 (MQ=255) gTCAACCCTGCCCCTTCTTGTTGTTGAGCAATTTCCAGCGCGTCGTGTCGCCATTCACCGACCGCCGGTAAACCTAACGCCTGCGGGCGATCGCGTAGCCGCCAGCAGAGAAAAATCCCCACGACTATCGCCATAcaaccagcaaccag > 2:595834‑M1/1‑135 (MQ=255) gTCAACCCTGCCCCTTCTTGTTGTTGAGCAATTTCCAGCGCGTCGTGTCGCCATTCACCGACCGCCGGGAAACCTAACGCCTGCGGGCGATCGCGTAGCCGCCAGCAGAGAAAAATCCCCACGACTATCGCCATAcaaccagcaaccag > 1:4044732‑M1/1‑135 (MQ=255) tCAACCCTGCCCCTTCTTGTTGTTGAGCAATTTCCAGCGCGTCGTGTCGCCATTCACCGACCGCCGGTAAACCTAACGCCTGCGGGCGATCGCGTAGCCGCCAGCAGAGAAAAATCCCCACGACTATCGCCCTAcaaccagcaaccagc > 2:2990285‑M1/1‑134 (MQ=255) tCAACCCTGCCCCTTCTTGTTGTTGAGCAATTTCCAGCGCGTCGTGTCGCCATTCACCGACCGCCGGTAAACCTAACGCCTGCGGGCGATCGCGTAGCCGCCAGCAGAGAAAAATCCCCACGACTATCGCCATAcaaccagcaaccagc > 1:3551451‑M1/1‑134 (MQ=255) cAACCCTGCCCCTTCTTGTTGTTGAGCAATTTCCAGCGCGTCGTGTCGCCATTCACCGACCGCCGGTAAACCTAACGCCTGCGGGCGATCGCGTAGCCGCCAGCAGAGAAAAATCCCCACGACTATCGCCATACAACCAGCAatcatca < 1:3195384/149‑1 (MQ=255) aaCCCTGCCCCTTCTTGTTGTTGAGCAATTTCCAGCGCGTCGTGTCGCCATTCACCGACCGCCGGTAAACCTAACGCCTGCGGGCGATCGCGTAGCCGCCAGCAGAGAAAAATCCCCACGACTATCGCCATAcaaccagcaaccagcaa > 2:888688‑M1/1‑132 (MQ=255) aaCCCTGCCCCTTCTTGTTGTTGAGCAATTTCCAGCGCGTCGTGTCGCCATTCACCGACCGCCGGTAAACCTAACGCCTGCGGGCGATCGCGTAGCCGCCAGCAGAGAAAAATCCCCACGACTATCGCCATAcaaccagcaaccagcaa > 2:3917000‑M1/1‑132 (MQ=255) aCCCTGCCCCTTCTTGTTGTTGAGCAATTTCCAGCGCGTCGTGTCGCCATTCACCGACCGCCGGTAAACCAAACGCCTGCGGGCGATCGCGTAGCCGCCAGCAGAGAAAAAACCCCACGACAATCGCCATAcaaccagcaaccaccaaa > 1:4446915‑M1/1‑131 (MQ=255) cccTGCCCCTTCTTGTTGTTGAGCAATTTCCAGCGCGTCGTGTCGCCATTCACCGACCGCCGGTAAACCTAACGCCTGCGGGCGATCGCGTAGCCGCCAGCAGAGAAAAATCCCCACGACTATCGCCATAcaaccagcaaccagcaatc > 2:3126568‑M1/1‑130 (MQ=255) ccTGCCCCTTCTTGTTGTTGAGCAATGTCCAGCGCGTCGTGTCGCCATTCACCGACCGCCGGTAAACCTAACGCCTGCGGGCGATCGCGTAGCCGCCAGCAGAGAAAAATCCCCACGACTATCGCCATACAACCAGCAATCATCATccc < 2:2535184/149‑1 (MQ=255) cTGCCCCTTCTTGTTGTTGAGCAATTTCCAGCGCGTCGTGTCGCCATTCACCGACCGCCGGTAAACCTAACGCCTGCGGGCGATCGCGTAGCCGCCAGCAGAGAAAAATCCCCACGACTATCGCCATAcaaccagcaaccagcaatcat > 1:1485043‑M1/1‑128 (MQ=255) ccccTTCTTGTTGTTGAGCAATTTCCAGCGCGTCGTGTCGCCATTCACCGACCGCCGGTAAACCTAACGCCTGCGGGCGATCGCGTAGCCGCCAGCAGAGAAAAATCCCCACGACTATCGCCATAcaaccagcaaccagcaatcatcat > 1:2126699‑M1/1‑125 (MQ=255) ccccTTCTTGTTGTTGAGCAATTTCCAGCGCGTCGTGTCGCCATTCACCGACCGCCGGTAAACCTAACGCCTGCGGGCGATCGCGTAGCCGCCAGCAGAGAAAAATCCCCACGACTATCGCCATAcaaccagcaaccagcaatcatcat > 1:3380973‑M1/1‑125 (MQ=255) ccTTCTTGTTGTTGAGCAATTTCCAGCGCGTCGTGTCGCCATTCACCGACCGCCGGTAAACCTAACGCCTGCGGGCGATCGCGTAGCCGCCAGCAGAGAAAAATCCCCACGACTATCGCCATAcaaccagcaaccagcaatcatcatcc > 1:4493552‑M1/1‑123 (MQ=255) ttcttGTTGTTGAGCAATTTCCAGCGCGTCGTGTCGCCATTCACCGACCGCCGGTAAACCTAACGCCTGCGGGCGATCGCGTAGCCGCCAGCAGAGAAAAATCCCCACGACTATCGCCATAcaaccagcaaccagcaatcatcatcccg > 2:4199525‑M1/1‑121 (MQ=255) cttGTTGTTGAGCAATTTCCAGCGCGTCGTGTCGCCATTCACCGACCGCCGGTAAACCTAACGCCTGCGGGCGATCGCGTAGCCGCCAGCAGAGAAAAATCCCCACGACTATCGCCATAcaaccagcaaccagcaatcatcatcccggc > 1:3353146‑M1/1‑119 (MQ=255) ttgttgttgAGCAATTTCCAGCGCGTCGTGTCGCCATTCACCGACCGCCGGTAAACCTAACGCCTGCGGGCGATCGCGTAGCCGCCAGCAGAGAAAAATCCCCACGACTATCGCCATAcaaccagcaaccagcaatcatcatcccggca < 1:1017360‑M1/149‑32 (MQ=255) ttgttgttgAGCAATTTCCAGCGCGTCGTGTCGCCATTCACCGACCGCCGGTAAACCTAACGCCTGCGGGCGATCGCGTAGCCGCCAGCAGAGAAAAATCCCCACGACTATCGCCATAcaaccagcaaccagcaatcatcatcccggca < 1:1017263‑M1/149‑32 (MQ=255) tgttgttgAGCAATTTCCAGCGCGTCGTGTCGCCATTCACCGACCGCCGGTAAACCTAACGCCTGCGGGCGATCGCGTAGCCGCCAGCAGAGAAAAATCCCCACGACTATCGCCATAcaaccagcaaccagcaatcatcatcccggcac < 1:378104‑M1/149‑33 (MQ=255) ttgttgAGCAATTTCCAGCGCGTCGTGTCGCCATTCACCGACCGCCGGTAAACCTAACGCCTGCGGGCGATCGCGTAGCCGCCAGCAGAGAAAAATCCCCACGACTATCGCCATAcaaccagcaaccagcaatcatcatcccggcacgc > 2:1686773‑M1/1‑115 (MQ=255) tgttgAGCAATTTCCAGCGCGTCGTGTCGCCATTCACCGACCGCCGGTAAACCTAACGCCTGCGGGCGATCGCGTAGCCGCCAGCAGAGAAAAATCCCCACGACTATCGCCATAcaaccagcaaccagcaatcatcatcccggcacgcc < 1:1564146‑M1/149‑36 (MQ=255) tgttgAGCAATTTCCAGCGCGTCGTGTCGCCATTCACCGACCGCCGGTAAACCTAACGCCTGCGGGCGATCGCGTAGCCGCCAGCAGAGAAAAATCCCCACGACTATCGCCATAcaaccagcaaccagcaatcatcatcccggcacgcc < 2:4125887‑M1/149‑36 (MQ=255) gttgAGCAATTTCCAGCGCGTCGTGTCGCCATTCACCGACCGCCGGTAAACCTAACGCCTGCGGGCGATCGCGTAGCCGCCAGCAGAGAAAAATCCCCACGACTATCGCCATAcaaccagcaaccagcaatcatcatcccggcacgcca > 1:2848840‑M1/1‑113 (MQ=255) tgAGCAATTTCCAGCGCGTCGTGTCGCCATTCACCGACCGCCGGTAAACCTAACGCCTGCGGGCGATCGCGTAGCCGCCAGCAGAGAAAAATCCCCACGACTATCGCCATAcaaccagcaaccagcaatcatcatcccggcacgccagc > 2:2333778‑M1/1‑111 (MQ=255) gAGCAATTTCCAGCGCGTCGTGTCGCCATTCACCGACCGCCGGTAAACCTAACGCCTGCGGGCGATCGCGTAGCCGCCAGCAGAGAAAAATCCCCACGACTATCGCCATAcaaccagcaaccagcaatcatcatcccggcacgccagcc < 1:1375121‑M1/149‑40 (MQ=255) aagttccaGCGCGTCGTGTCGCCATTCACCGACCGCCGGTAAACCTAACGCCTGCGGGCGAGCGCGTAGCCGCCAGCAGAGAAAAATCCCCACGACTATCGCCATAcaaccagcaaccagcaatcatcatcccggcacgccagccgtaa < 2:2908886‑M1/146‑44 (MQ=255) tttCCAGCGCGTCGTGTCGCCATTCACCGACCGCCGGTAAACCTAACGCCTGCGGGCGATCGCGTAGCCGCCAGCAGAGAAAAATCCCCACGACTATCGCCATAcaaccagcaaccagcaatcatcatcccggcacgccagccgtaatg > 2:2016639‑M1/1‑104 (MQ=255) ccAGCGCGTCGTGTCGCCATTCACCGACCGCCGGTAAACCTAACGCCTGCGGGCGATCGCGTAGCCGCCAGCATAGAAAAATCCCCACGACTATCGCCATAcaaccagcaaccagcaatcatcatcccggcacgccagccgtaatgcag > 1:3320223‑M1/1‑101 (MQ=255) cAGCGCGTCGTGTCGCCATTCACCGACCGCCGGTAAACCTAACGCCTGCGGGCGATCGCGTAGCCGCCAGCAGAGAAAAATCCCCACGACTATCGCCATAcaaccagcaaccagcaatcatcatcccggcacgccagccgtaatgcagc > 2:3336281‑M1/1‑100 (MQ=255) aGCGCGTCGTGTCGCCATTCACCGACCGCCGGTAAACCTAACGCCTGCGGGCGATCGCGTAGCCGCCAGCAGAGAAAAATCCCCACGACTATCGCCATACAACCAGCAATCATCATCCCGGCACGCCAGCCGTAATGCAGCGCAGCCGc < 2:2387149/149‑1 (MQ=255) gcgcGTCGTGTCGCCATTCACCGACCGCCGGTAAACCTAACGCCTGCGGGCGATCGCGTAGCCGCCAGCAGAGAAAAATCCCCACGACTATCGCCATAcaaccagcaaccagcaatcatcatcccggcacgccagccgtaatgcagcgc > 1:522972‑M1/1‑98 (MQ=255) gcgcGTCGGGTCGCCATTCACCGCCCGCCGGTAAACCTAACGCCTGCGGGCGATCGCGTAGCCGCCAGCAGAGAAAAATCCCCACGACTATCGCCATAcaaccagcaaccagcaatcatcatcccggcacgccagccgtaatgcagcgc < 2:4043944‑M1/149‑52 (MQ=255) gtgtCGCCATTCACCGACCGCCGGTAAACCTAACGCCTGCGGGCGATCGCGTAGCCGCCAGCAGAGAAAAATCCCCACGACTATCGCCATAcaaccagcaaccagcaatcatcatcccggcacgccagccgtaatgcagcgcagccgct > 2:4694884‑M1/1‑91 (MQ=255) gtgtCGCCATTCACCGACCGCCGGTAAACCTAACGCCTGCGGGCGATCGCGTAGCCGCCAGCAGAGAAAAATCCCCACGACTATCGCCATAcaaccagcaaccagcaatcatcatcccggcacgccagccgtaatgcagcgcagccgct < 2:1454389‑M1/149‑59 (MQ=255) tgtCGCCATTCACCGACCGCCGGTAAACCTAACGCCTGCGGGCGATCGCGTAGCCGCCAGCAGAGAAAAATCCCCACGACTATCGCCATAcaaccagcaaccagcaatcatcatcccggcacgccagccgtaatgcagcgcagccgctg > 1:2513762‑M1/1‑90 (MQ=255) tgtCGCCATTCACCGACCGCCGGTAAACCTAACGCCTGCGGGCGATCGCGTAGCCGCCAGCAGAGAAAAATCCCCACGACTATCGCCATAcaaccagcaaccagcaatcatcatcccggcacgccagccgtaatgcagcgcagccgctg > 1:3382632‑M1/1‑90 (MQ=255) tgtCGCCATTCACCGACCGCCGGTAAACCTAACGCCTGCGGGCGATCGCGTAGCCGCCAGCAGAGAAAAATCCCCACGACTATCGCCATAcaaccagcaaccagcaatcatcatcccggcacgccagccgtaatgcagcgcagccgctg > 1:3382501‑M1/1‑90 (MQ=255) tCGCCATTCACCGACCGCCGGTAAACCTAACGCCTGCGGGCGATCGCGTAGCCGCCAGCAGAGAAAAATCCCCACGACTATCGCCATAcaaccagcaaccagcaatcatcatcccggcacgccagccgtaatgcagcgcagccgctgcc > 2:3375521‑M1/1‑88 (MQ=255) gCCATTCACCGACCGCCGGTAAACCTAACGCCTGCGGGCGATCGCGTAGCCGCCAGCAGAGAAAAATCCCCACGACTATCGCCATAcaaccagcaaccagcaatcatcatcccggcacgccagccgtaatgcagcgcagccgctgccat < 1:2205326‑M1/149‑64 (MQ=255) ccATTCACCGACCGCCGGTAAACCTAACGCCTGCGGGCGATCGCGTAGCCGCCAGCAGAGAAAAATCCCCACGACTATCGCCATAcaaccagcaaccagcaatcatcatcccggcacgccagccgtaatgcagcgcagccgctgccatc > 1:547886‑M1/1‑85 (MQ=255) ccATTCACCGACCGCCGGTAAACCTAACGCCTGCGGGCGATCGCGTAGCCGCCAGCAGAGAAAAATCCCCACGACTATCGCCATAcaaccagcaaccagcaatcatcatcccggcacgccagccgtaatgcagcgcagccgctgccatc < 1:1785804‑M1/149‑65 (MQ=255) ccATTCACCGACCGCCGGTAAACCTAACGCCTGCGGGCGATCGCGTAGCCGCCAGCAGAGAAAAATCCCCACGACTATCGCCATAcaaccagcaaccagcaatcatcatcccggcacgccagccgtaatgcagcgcagccgctgccatc > 1:547832‑M1/1‑85 (MQ=255) cATTCACCGACCGCCGGTAAACCTAACGCCTGCGGGCGATCGCGTAGCCGCCAGCAGAGAAAAATCCCCACGACTATCGCCATAcaaccagcaaccagcaatcatcatcccggcacgccagccgtaatgcagcgcagccgctgccatca > 2:3202497‑M1/1‑84 (MQ=255) cATTCACCGACCGCCGGTAAACCTAACGCCTGCGGGCGATCGCGTAGCCGCCAGCAGAGAAAAATCCCCACGACTATCGCCATAcaaccagcaaccagcaatcatcatcccggcacgccagccgtaatgcagcgcagccgctgccatca > 1:356479‑M1/1‑84 (MQ=255) cATTCACCGACCGCCGGTAAACCTAACGCCTGCGGGCGATCGCGTAGCCGCCAGCAGAGAAAAATCCCCACGACTATCGCCATACAACCAGCAATCATCATCCCGGCACGCCAGCCGTAATGCAGCGCAGCCGCTGCCATCACAATggg > 2:2824841/1‑149 (MQ=255) tCACCGACCGCCGGTAAACCTAACGCCTGCGGGCGATCGCGTAGCCGCCAGCAGAGAAAAATCCCCACGACTATCGCCATAcaaccagcaaccagcaatcatcatcccggcacgccagccgtaatgcagcgcagccgctgccatcacaa < 1:60990‑M1/149‑69 (MQ=255) tCACCGACCGCCGGTAAACCTAACGCCTGCGGGCGATCGCGTAGCCGCCAGCAGAGAAAAATCCCCACGACTATCGCCATAcaaccagcaaccagcaatcatcatcccggcacgccagccgtaatgcagcgcagccgctgccatcacaa < 1:2453427‑M1/149‑69 (MQ=255) ccgaccgCCGGTAAACCTAACGCCTGCGGGCGATCGCGTAGCCGCCAGCAGAGAAAAATCCCCACGACTATCGCCATAcaaccagcaaccagcaatcatcatcccggcacgccagccgtaatgcagcgcagccgctgccatcacaatgg > 1:2622779‑M1/1‑78 (MQ=255) cgaccgCCGGTAAACCTAACGCCTGCGGGCGATCGCGTAGCCGCCAGCAGAGAAAAATCCCCACGACTATCGCCATAcaaccagcaaccagcaatcatcatcccggcacgccagccgtaatgcagcgcagccgctgccatcacaatggg < 1:2567111‑M1/149‑73 (MQ=255) accgCCGGTAAACCTAACGCCTGCGGGCGATCGCGTAGCCGCCAGCAGAGAAAAATCCCCACGACTATCGCCATAcaaccagcaaccagcaatcatcatcccggcacgccagccgtaatgcagcgcagccgctgccatcacaatgggac > 2:3711533‑M1/1‑75 (MQ=255) ccgccgGTAAACCTAACGCCTGCGGGCGATCGCGTAGCCGCCAGCAGAGAAAAATCCCCACGACTATCGCCATAcaaccagcaaccagcaatcatcatcccggcacgccagccgtaatgcagcgcagccgctgccatcacaatgggaat < 2:1077436‑M1/149‑76 (MQ=255) ccgGTAAACCTAACGCCTGCGGGCGATCGCGTAGCCGCCAGCAGAGAAAAATCCCCACGACTATCGCCATACAACCAGCAATCATCATCCCGGCACGCCAGCCGTAATGCAGCGCAGCCGCTGCCATCACAATGGGAATGAGTGcgccg > 2:453706/1‑149 (MQ=255) cgGTAAACCTAACGCCTGCGGGCGATCGCGTAGCCGCCAGCAGAGAAAAATCCCCACGACTATCGCCATAcaaccagcaaccagcaatcatcatcccggcacgccagccgtaatgcagcgcagccgctgccatcacaatgggaatgagt < 1:3427743‑M1/149‑80 (MQ=255) cgGTAAACCTAACGCCTGCGGGCGATCGCGTAGCCGCCAGCAGAGAAAAATCCCCACGACTATCGCCATAcaaccagcaaccagcaatcatcatcccggcacgccagccgtaatgcagcgcagccgctgccatcacaatgggaatgagt < 1:1880054‑M1/149‑80 (MQ=255) ggTAAACCTAACGCCTGCGGGCGATCGCGTAGCCGCCAGCAGAGAAAAATCCCCACGACTATCGCCATAcaaccagcaaccagcaatcatcatcccggcacgccagccgtaatgcagcgcagccgctgccatcacaatgggaatgagtg < 1:1137921‑M1/149‑81 (MQ=255) gTAAACCTAACGCCTGCGGGCGATCGCGTAGCCGCCAGCAGAGAAAAATCCCCACGACTATCGCCATAcaaccagcaaccagcaatcatcatcccggcacgccagccgtaatgcagcgcagccgctgccatcacaatgggaatgagtgc > 2:1765878‑M1/1‑68 (MQ=255) tAAACCTAACGCCTGCGGGCGATCGCGTAGCCGCCAGCAGAGAAAAATCCCCACGACTATCGCCATAcaaccagcaaccagcaatcatcatcccggcacgccagccgtaatgcagcgcagccgctgccatcacaatgggaatgagtgcg > 2:1606814‑M1/1‑67 (MQ=255) aaaCCTAACGCCTGCGGGCGATCGCGTAGCCGCCAGCAGAGAAAAATCCCCACGACTATCGCCATAcaaccagcaaccagcaatcatcatcccggcacgccagccgtaatgcagcgcagccgctgccatcacaatgggaatgagtgcgc < 1:505697‑M1/149‑84 (MQ=255) aCCTAACGCCTGCGGGCGATCGCGTAGCCGCCAGCAGAGAAAAATCCCCACGACTATCGCCATAcaaccagcaaccagcaatcatcatcccggcacgccagccgtaatgcagcgcagccgctgccatcacaatgggaatgagtgcgccg > 1:731575‑M1/1‑64 (MQ=255) aCGCCTGCGGGCGATCGCGTAGCCGCCAGCAGAGAAAAATCCCCACGACTATCGCCATAcaaccagcaaccagcaatcatcatcccggcacgccagccgtaatgcagcgcagccgctgccatcacaatgggaatgagtgcgccgccgac > 1:83059‑M1/1‑59 (MQ=255) ccTGCGGGCGATCGCGTAGCCGCCAGCAGAGAAAAATCCCCACGACTATCGCCATAcaaccagcaaccagcaatcatcatcccggcacgccagccgtaatgcagcgcagccgctgccatcacaatgggaatgagtgcgccgccgacgtt < 1:3271132‑M1/149‑94 (MQ=255) cTGCGGGCGATCGCGTAGCCGCCAGCAGAGAAAAATCCCCACGACTATCGCCATAcaaccagcaaccagcaatcatcatcccggcacgccagccgtaatgcagcgcagccgctgccatcacaatgggaatgagtgcgccgccgacgtta > 1:27501‑M1/1‑55 (MQ=255) cGGGCGATCGCGTAGCCGCCAGCAGAGAAAAATCCCCACGACTATCGCCATAcaaccagcaaccagcaatcatcatcccggcacgccagccgtaatgcagcgcagccgctgccatcacaatgggaatgagtgcgccgccgacgttatgc < 1:4285546‑M1/149‑98 (MQ=255) gggCGATCGCGTAGCCGCCAGCAGAGAAAAATCCCCACGACTATCGCCATAcaaccagcaaccagcaatcatcatcccggcacgccagccgtaatgcagcgcagccgctgccatcacaatgggaatgagtgcgccgccgacgttatgcg > 2:2472377‑M1/1‑51 (MQ=255) ggCGATCGCGTAGCCGCCAGCAGAGAAAAATCCCCACGACTATCGCCATAcaaccagcaaccagcaattatcatcccggcacgccagccgtaatgcagcgcagccgctgccatcacaatgggaatgagtgcgccgccgacgttatgcgc > 1:1994710‑M1/1‑50 (MQ=255) ggCGATCGCGTAGCCGCCAGCAGAGAAAAATCCCCACGACTATCGCCATAcaaccagcaaccagcaatcatcatcccggcacgccagccgtaatgcagcgcagccgctgccatcacaatgggaatgagtgcgccgccgacgttatgcgc > 2:1877286‑M1/1‑50 (MQ=255) gCGATCGCGTAGCCGCCAGCAGAGAAAAATCCCCACGACTATCGCCATAcaaccagcaaccagcaatcatcatcccggcacgccagccgtaatgcagcgcagccgctgccatcacaatgggaatgagtgcgccgccgacgttatgcgcc > 1:3565673‑M1/1‑49 (MQ=255) cGATCGCGTAGCCGCCAGCAGAGAAAACTCCCCACGACTATCGCCATAcaaccagcaaccagcaatcatcatcccggcacgccagccgtaatgcagcgcagccgctgccatcacaatgggaatgagtgcgccgccgacgttatgcgccg < 2:2087825‑M1/149‑102 (MQ=255) gcgTAGCCGCCAGCAGAGAAAAATCCCCACGACTATCGCCATAcaaccagcaaccagcaatcatcatcccggcacgccagccgtaatgcagcgcagccgctgccatcacaatgggaatgagtgcgccgccgacgttatgcgccgtgttc < 2:2134438‑M1/149‑107 (MQ=255) tAGCCGCCAGCAGAGAAAAATCCCCACGACTATCGCCATAcaaccagcaaccagcaatcatcatcccggcacgccagccgtaatgcagcgcagccgctgccatcacaatgggaatgagtgcgccgccgacgttatgcgccgtgttccat > 2:3557569‑M1/1‑40 (MQ=255) aGCCGCCAGCAGAGAAAAATCCCCACGACTATCGCCATAcaaccagcaaccagcaatcatcatcccggcacgccagccgtaatgcagcgcagccgctgccatcacaatgggaatgagtgcgccgccgacgttatgcgccgtgttccata > 1:4611728‑M1/1‑39 (MQ=255) gccgccAGCAGAGAAAAATCCCCACGACTATCGCCATAcaaccagcaaccagcaatcatcatcccggcacgccagccgtaatgcagcgcagccgctgccatcacaatgggaatgagtgcgccgccgacgttatgcgccgtgttccataa > 1:419389‑M1/1‑38 (MQ=255) cagcagAGAAAAATCCCCACGACTATCGCCATAcaaccagcaaccagcaatcatcatcccggcacgccagccgtaatgcagcgcagccgctgccatcacaatgggaatgagtgcgccgccgacgttatgcgccgtgttccataatgccc > 1:3140001‑M1/1‑33 (MQ=255) gcagAGAAAAATCCCCACGACTATCGCCATAcaaccagcaaccagcaatcatcatcccggcacgccagccgtaatgcagcgcagccgctgccatcacaatgggaatgagtgcgccgccgacgttatgcgccgtgttccataatgcccac > 1:4330048‑M1/1‑31 (MQ=255) agaAAAATCCCCACGACTATCGCCATAcaaccagcaaccagcaatcatcatcccggcacgccagccgtaatgcagcgcagccgctgccatcacaatgggaatgagtgcgccgccgacgttatgcgccgtgttccataatgcccaccaac < 2:4094908‑M1/149‑123 (MQ=255) agaAAAATCCCCACGACTATCGCCATAcaaccagcaaccagcaatcatcatcccggcacgccagccgtaatgcagcgcagccgctgccatcacaatgggaatgagtgcgccgccgacgttatgcgccgtgttccataatgcccaccaac < 2:2755823‑M1/149‑123 (MQ=255) aaaaaTCCCCACGACTATCGCCATAcaaccagcaaccagcaatcatcatcccggcacgccagccgtaatgcagcgcagccgctgccatcacaatgggaatgagtgcgccgccgacgttatgcgccgtgttccataatgcccaccaaccg > 2:2229768‑M1/1‑25 (MQ=255) aaaTCCCCACGACTATCGCCATAcaaccagcaaccagcaatcatcatcccggcacgccagccgtaatgcagcgcagccgctgccatcacaatgggaatgagtgcgccgccgacgttatgcgccgtgttccataatgcccaccaaccgcc > 2:4363681‑M1/1‑23 (MQ=255) aaTCCCCACGACTATCGCCATAcaaccagcaaccagcaatcatcatcccggcacgccagccgtaatgcagcgcagccgctgccatcacaatgggaatgagtgcgccgccgacgttatgcgccgtgttccataatgcccaccaaccgccg > 1:629889‑M1/1‑22 (MQ=255) cACGACTATCGCCATAcaaccagcaaccagcaatcatcatcccggcacgccagccgtaatgcagcgcagccgctgccatcacaatgggaatgagtgcgccgccgacgttatgcgccgtgttccataatgcccaccaaccgccgcgctcg < 2:678984‑M1/149‑134 (MQ=255) gACTATCGCCATAcaaccagcaaccagcaatcatcatcccggcacgccagccgtaatgcagcgcagccgctgccatcacaatgggaatgagtgcgccgccgacgttatgcgccgtgttccataatgcccaccaaccgccgcgctcggta < 1:678744‑M1/149‑137 (MQ=255) aCTATCGCCATAcaaccagcaaccagcaatcatcatcccggcacgccagccgtaatgcagcgcagccgctgccatcacaatgggaatgagtgcgccgccgacgttatgcgccgtgttccataatgcccaccaaccgccgcgctcggtac < 1:4469740‑M1/149‑138 (MQ=255) cTATCGCCATAcaaccagcaaccagcaatcatcatcccggcacgccagccgtaatgcagcgcagccgctgccatcacaatgggaatgagtgcgccgccgacgttatgcgccgtgttccataatgcccaccaaccgccgcgctcggtacg > 1:4361716‑M1/1‑11 (MQ=255) tATCGCCATAcaaccagcaaccagcaatcatcatcccggcacgccagccgtaatgcagcgcagccgctgccatcacaatgggaatgagtgcgccgccgacgttatgcgccgtgttccataatgcccaccaaccgccgcgctcggtacgt < 1:3085590‑M1/149‑140 (MQ=255) aTCGCCATAcaaccagcaaccagcaatcatcatcccggcacgccagccgtaatgcagcgcagccgctgccatcacaatgggaatgagtgcgccgccgacgttatgcgccgtgttccataatgcccaccaaccgccgcgctcggtacgtg > 2:1202262‑M1/1‑9 (MQ=255) gCCATAcaaccagcaaccagcaatcatcatcccggcacgccagccgtaatgcagcgcagccgctgccatcacaatgggaatgagtgcgccgccgacgttatgcgccgtgttccataatgcccaccaaccgccgcgctcggtacgtgaat > 1:2588620‑M1/1‑6 (MQ=255) cATAcaaccagcaaccagcaatcatcatcccggcacgccagccgtaatgcagcgcagccgctgccatcacaatgggaatgagtgcgccgccgacgttatgcgccgtgttccataatgcccaccaaccgccgcgctcggtacgtgaatac > 2:818523‑M1/1‑4 (MQ=255) tAcaaccagcaaccagcaatcatcatcccggcacgccagccgtaatgcagcgcagccgctgccatcacaatgggaatgagtgcgccgccgacgttatgcgccgtgttccataatgcccaccaaccgccgcgctcggtacgtgaatacca > 2:4585977‑M1/1‑2 (MQ=255) | GGATCTCTTTACGCGTCAACCCTGCCCCTTCTTGTTGTTGAGCAATTTCCAGCGCGTCGTGTCGCCATTCACCGACCGCCGGTAAACCTAACGCCTGCGGGCGATCGCGTAGCCGCCAGCAGAGAAAAATCCCCACGACTATCGCCATACAACCAGCAATCATCATCCCGGCACGCCAGCCGTAATGCAGCGCAGCCGCTGCCATCACAATGGGAATGAGTGCGCCGCCGACGTTATGCGCCGTGTTCCATAATGCCCACCAACCGCCGCGCTCGGTACGTGAATACCAGGCCGTT > CP009273/3841261‑3841556 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |