| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| JC | CP009273 | 3,841,409 | +CAACCAG | 93.4% | coding (576/1320 nt) | uhpC ← | membrane protein regulates uhpT expression |
| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | CP009273 | = 3841409 | 16 (0.060) | 225 (0.850) +CAACCAG |
120/242 | NT | 93.4% | coding (576/1320 nt) | uhpC | membrane protein regulates uhpT expression |
| ? | CP009273 | 3841410 = | 16 (0.060) | coding (575/1320 nt) | uhpC | membrane protein regulates uhpT expression | |||||
Only 100 of 278 total aligned reads displayed.
GATCTCTTTACGCGTCAACCCTGCCCCTTCTTGTTGTTGAGCAATTTCCAGCGCGTCGTGTCGCCATTCACCGACCGCCGGTAAACCTAACGCCTGCGGGCGATCGCGTAGCCGCCAGCAGAGAAAAATCCCCACGACTATCGCCATACAACCAGCAATCATCATCCCGGCACGCCAGCCGTAATGCAGCGCAGCCGCTGCCATCACAATGGGAATGAGTGCGCCGCCGACGTTATGCGCCGTGTTCCATAATGCCCACCAACCGCCGCGCTCGGTACGTGAATACCAGGCCGTTA > CP009273/3841262‑3841557 | ttacgcgtcaaccctgccccttcttgttgttgagcaatttccagcgcgtcgtgtcgccattcaccgaccgccggtaaacctaacgcctgcgggcgatcgcgtagccgccagcagagaaaaatccccacgactatcgccatacaaccagc < 2:3939924‑M2/1‑1 (MQ=255) acgcgtcaaccctgccccttcttgttgttgagcaatttccagcgcgtcgtgtcgccattcaccgaccgccggtaaacctaacgcctgcgggcgatcgcgtagccgccagcagagaaaaatccccacgactatcgccatacaaccagcaa < 2:2338707‑M2/3‑1 (MQ=255) gtcaaccctgccccttcttgttgttgagcaatttccagcgcgtcgtgtcgccattcaccgaccgccggtaaacctaacgcctgcgggcgatcgcgtagccgccagcagagaaaaatccccacgactatcgccatacaaccagcaaccag < 1:2776610‑M2/7‑1 (MQ=255) gtcaaccctgccccttcttgttgttgagcaatttccagcgcgtcgtgtcgccattcaccgaccgccggtaaacctaacgcctgcgggcgatcgcgtagccgccagcagagaaaaatccccacgactatcgccatacaaccagcaaccag < 1:1600675‑M2/7‑1 (MQ=255) gtcaaccctgccccttcttgttgttgagcaatttccagcgcgtcgtgtcgccaatcaccgaccgccggtaaacctaacgcctgcgggcgatcgcgtagccgccaccagacaaaaatccccaccactatcgccatacaaccagcaaccag > 1:4590884‑M2/143‑149 (MQ=255) tcaaccctgccccttcttgttgttgagcaatttccagcgcgtcgtgtcgccattcaccgaccgccggtaaacctaacgcctgcgggcgatcgcgtagccgccagcagagaaaaatccccacgactatcgccctacaaccagcaaccagc > 2:2990285‑M2/142‑149 (MQ=255) caaccctgccccttcttgttgttgagcaatttccagcgcgtcgtgtcgccattcaccgaccgccggtaaacctaacgcctgcgggcgatcgcgtagccgccagcagagaaaaatccccacgactatcgccatacaaccagcaaccagca > 2:504638‑M2/141‑149 (MQ=255) aaccctgccccttcttgttgttgagcaatttccagcgcgtcgtgtcgccattcaccgaccgccggtaaacctaacgcctgcgggcgatcgcgtagccgccagcagagaaaaatccccacgactatcgccatacaaccagcaaccagcaa > 2:888688‑M2/140‑149 (MQ=255) accctgccccttcttgttgttgagcaatttccagcgcgtcgtgtcgccattcaccgaccgccggtaaaccaaacgcctgcgggcgatcgcgtagccgccagcagagaaaaaaccccacgacaatcgccatacaaccagcaaccaccaaa > 1:4446915‑M2/139‑148 (MQ=255) ccctgccccttcttgttgttgagcaatttccagcgcgtcgtgtcgccattcaccgaccgccggtaaacctaacgcctgcgggcgatcgcgtagccgccagcagagaaaaatccccacgactatcgccatacaaccagCAACCAGCAatc > 2:3126568‑M2/138‑149 (MQ=255) gccccttcttgttgttgagcaatttccagcgcgtcgtgtcgccattcaccgaccgccggtaaacctaacgcctgcgggcgatcgcgtagccgccagcagagaaaaatccccacgactatcgccatacaaccagCAACCAGCAatcatca < 2:4601100‑M2/16‑1 (MQ=255) cAACCCTGCCCCTTCTTGTTGTTGAGCAATTTCCAGCGCGTCGTGTCGCCATTCACCGACCGCCGGTAAACCTAACGCCTGCGGGCGATCGCGTAGCCGCCAGCAGAGAAAAATCCCCACGACTATCGCCATACAACCAGCAatcatca < 1:3195384/149‑1 (MQ=255) ccccttcttgttgttgagcaatttccagcgcgtcgtgtcgccattcaccgaccgccggtaaacctaacgcctgcgggcgatcgcgtagccgccagcagagaaaaatccccacgactatcgccatacaaccagCAACCAGCAatcatcat > 1:2126699‑M2/133‑149 (MQ=255) ccccttcttgttgttgagcaatttccagcgcgtcgtgtcgccattcaccgaccgccggtaaacctaacgcctgcgggcgatcgcgtagccgccagcagagaaaaatccccacgactatcgccatacaaccagCAACCAGCAatcatcat > 1:4356713‑M2/133‑149 (MQ=255) ccttcttgttgttgagcaatttccagcgcgtcgtgtcgccattcaccgaccgccggtaaacctaacgcctgcgggcgatcgcgtagccgccagcagagaaaaatccccacgactatcgccatacaaccagCAACCAGCAATCATCATcc > 1:613827‑M2/131‑149 (MQ=255) ttcttgttgttgagcaatttccagcgcgtcgtgtcgccattcaccgaccgccggtaaacctaacgcctgcgggcgatcgcgtagccgccagcagagaaaaatccccacgactatcgccatacaaccagCAACCAGCAATCATCATCCCg > 2:4199525‑M2/129‑149 (MQ=255) ttgttgttgagcaatttccagcgcgtcgtgtcgccattcaccgaccgccggtaaacctaacgcctgcgggcgatcgcgtagccgccagcagagaaaaatccccacgactatcgccatacaaccagCAACCAGCAATCATCATCCCGGCa < 1:1017287‑M2/24‑1 (MQ=255) gttgttgagcaatttccagcgcgtcgtgtcgccattcaccgaccgccggtaaacctaacgcctgcgggcgatcgcgtagccgccagcagagaaaaatccccacgactatcgccatacaaccagCAACCAGCAATCATCATCCCGGCACg > 2:1789230‑M2/124‑149 (MQ=255) gttgttgagcaatttccagcgcgtcgtgtcgccattcaccgaccgccggtaaacctaacgcctgcgggcgatcgcgtagccgccagcagagaaaaatccccacgactatcgccatacaaccagCAACCAGCAATCATCATCCCGGCACg > 1:3429317‑M2/124‑149 (MQ=255) ttgttgagcaatttccagcgcgtcgtgtcgccattcaccgaccgccggtaaacctaacgcctgcgggcgatcgcgtagccgccagcagagaaaaatccccacgactatcgccatacaaccagCAACCAGCAATCATCATCCCGGCACGc > 2:1686773‑M2/123‑149 (MQ=255) tgttgagcaatttccagcgcgtcgtgtcgccattcaccgaccgccggtaaacctaacgcctgcgggcgatcgcgtagccgccagcagagaaaaatccccacgactatcgccatacaaccagCAACCAGCAATCATCATCCCGGCACGcc < 1:1564146‑M2/28‑1 (MQ=255) gttgagcaatttccagcgcgtcgtgtcgccattcaccgaccgccggtaaacctaacgcctgcgggcgatcgcgtagccgccagcagagaaaaatccccacgactatcgccatacaaccagCAACCAGCAATCATCATCCCGGCACGCCa > 1:2848840‑M2/121‑149 (MQ=255) tgagcaatttccagcgcgtcgtgtcgccattcaccgaccgccggtaaacctaacgcctgcgggcgatcgcgtagccgccagcagagaaaaatccccacgactatcgccatacaaccagCAACCAGCAATCATCATCCCGGCACGCCAGc > 1:4306899‑M2/119‑149 (MQ=255) gagcaatttccagcgcgtcgtgtcgccattcaccgaccgccggtaaacctaacgcctgcgggcgatcgcgtagccgccagcagagaaaaatccccacgactatcgccatacaaccagCAACCAGCAATCATCATCCCGGCACGCCAGcc > 1:855454‑M2/118‑149 (MQ=255) gagcaatttccagcgcgtcgtgtcgccattcaccgaccgccggtaaacctaacgcctgcgggcgatcgcgtagccgccagcagagaaaaatccccacgactatcgccatacaaccagCAACCAGCAATCATCATCCCGGCACGCCAGcc < 1:1375121‑M2/32‑1 (MQ=255) gagcaatttccagcgcgtcgtgtcgccattcaccgaccgccggtaaacctaacgcctgcgggcgatcgcgtagccgccagcagagaaaaatccccacgactatcgccatacaaccagCAACCAGCAATCATCATCCCGGCACGCCAGcc < 1:635274‑M2/32‑1 (MQ=255) aagttccagcgcgtcgtgtcgccattcaccgaccgccggtaaacctaacgcctgcgggcgagcgcgtagccgccagcagagaaaaatccccacgactatcgccatacaaccagCAACCAGCAATCATCATCCCGGCACGCCAGCCGTaa < 2:2908886‑M2/36‑1 (MQ=255) atttccagcgcgtcgtgtcgccattcaccgaccgccggtaaacctaacgcctgcgggcgatcgcgtagccgccagcagagaaaaatccccacgactatcgccatacaaccagCAACCAGCAATCATCATCCCGGCACGCCAGCCGTAAt > 1:4708545‑M2/113‑149 (MQ=255) tttccagcgcgtcgtgtcgccattcaccgaccgccggtaaacctaacgcctgcgggcgatcgcgtagccgccagcagagaaaaatccccacgactatcgccatacaaccagCAACCAGCAATCATCATCCCGGCACGCCAGCCGTAATg > 2:2016370‑M2/112‑149 (MQ=255) ccagcgcgtcgtgtcgccattcaccgaccgccggtaaacctaacgcctgcgggcgatcgcgtagccgccagcatagaaaaatccccacgactatcgccatacaaccagCAACCAGCAATCATCATCCCGGCACGCCAGCCGTAATgcag > 1:3320254‑M2/109‑149 (MQ=255) gcgcgtcgtgtcgccattcaccgaccgccggtaaacctaacgcctgcgggcgatcgcgtagccgccagcagagaaaaatccccacgactatcgccatacaaccagCAACCAGCAATCATCATCCCGGCACGCCAGCCGTAATgcagcgc > 1:522972‑M2/106‑149 (MQ=255) gcgcgtcgggtcgccattcaccgcccgccggtaaacctaacgcctgcgggcgatcgcgtagccgccagcagagaaaaatccccacgactatcgccatacaaccagCAACCAGCAATCATCATCCCGGCACGCCAGCCGTAATgcagcgc < 2:4043944‑M2/44‑1 (MQ=255) gtgtcgccattcaccgaccgccggtaaacctaacgcctgcgggcgatcgcgtagccgccagcagagaaaaatccccacgactatcgccatacaaccagCAACCAGCAATCATCATCCCGGCACGCCAGCCGTAATGCAGCGCAGCCGCt < 2:1454389‑M2/51‑1 (MQ=255) gtgtcgccattcaccgaccgccggtaaacctaacgcctgcgggcgatcgcgtagccgccagcagagaaaaatccccacgactatcgccatacaaccagCAACCAGCAATCATCATCCCGGCACGCCAGCCGTAATGCAGCGCAGCCGCt < 2:3843393‑M2/51‑1 (MQ=255) tgtcgccattcaccgaccgccggtaaacctaacgcctgcgggcgatcgcgtagccgccagcagagaaaaatccccacgactatcgccatacaaccagCAACCAGCAATCATCATCCCGGCACGCCAGCCGTAATGCAGCGCAGCCGCTg > 1:3388372‑M2/98‑149 (MQ=255) tgtcgccattcaccgaccgccggtaaacctaacgcctgcgggcgatcgcgtagccgccagcagagaaaaatccccacgactatcgccatacaaccagCAACCAGCAATCATCATCCCGGCACGCCAGCCGTAATGCAGCGCAGCCGCTg > 1:3382626‑M2/98‑149 (MQ=255) tgtcgccattcaccgaccgccggtaaacctaacgcctgcgggcgatcgcgtagccgccagcagagaaaaatccccacgactatcgccatacaaccagCAACCAGCAATCATCATCCCGGCACGCCAGCCGTAATGCAGCGCAGCCGCTg > 1:2513762‑M2/98‑149 (MQ=255) tcgccattcaccgaccgccggtaaacctaacgcctgcgggcgatcgcgtagccgccagcagagaaaaatccccacgactatcgccatacaaccagCAACCAGCAATCATCATCCCGGCACGCCAGCCGTAATGCAGCGCAGCCGCTGcc > 2:3375521‑M2/96‑149 (MQ=255) gccattcaccgaccgccggtaaacctaacgcctgcgggcgatcgcgtagccgccagcagagaaaaatccccacgactatcgccatacaaccagCAACCAGCAATCATCATCCCGGCACGCCAGCCGTAATGCAGCGCAGCCGCTGCCAt < 1:2205326‑M2/56‑1 (MQ=255) gccattcaccgaccgccggtaaacctaacgcctgcgggcgatcgcgtagccgccagcagagaaaaatccccacgactatcgccatacaaccagCAACCAGCAATCATCATCCCGGCACGCCAGCCGTAATGCAGCGCAGCCGCTGCCAt < 1:264112‑M2/56‑1 (MQ=255) ccattcaccgaccgccggtaaacctaacgcctgcgggcgatcgcgtagccgccagcagagaaaaatccccacgactatcgccatacaaccagCAACCAGCAATCATCATCCCGGCACGCCAGCCGTAATGCAGCGCAGCCGCTGCCATc < 1:1785804‑M2/57‑1 (MQ=255) ccattcaccgaccgccggtaaacctaacgcctgcgggcgatcgcgtagccgccagcagagaaaaatccccacgactatcgccatacaaccagCAACCAGCAATCATCATCCCGGCACGCCAGCCGTAATGCAGCGCAGCCGCTGCCATc > 1:547873‑M2/93‑149 (MQ=255) cattcaccgaccgccggtaaacctaacgcctgcgggcgatcgcgtagccgccagcagagaaaaatccccacgactatcgccatacaaccagCAACCAGCAATCATCATCCCGGCACGCCAGCCGTAATGCAGCGCAGCCGCTGCCATca > 2:3203058‑M2/92‑149 (MQ=255) cattcaccgaccgccggtaaacctaacgcctgcgggcgatcgcgtagccgccagcagagaaaaatccccacgactatcgccatacaaccagCAACCAGCAATCATCATCCCGGCACGCCAGCCGTAATGCAGCGCAGCCGCTGCCATca > 1:356479‑M2/92‑149 (MQ=255) attcaccgaccgccggtaaacctaacgcctgcgggcgatcgcgtagccgccagcagagaaaaatccccacgactatcgccatacaaccagCAACCAGCAATCATCATCCCGGCACGCCAGCCGTAATGCAGCGCAGCCGCTGCCATcac > 1:754269‑M2/91‑149 (MQ=255) caccgaccgccggtaaacctaacgcctgcgggcgatcgcgtagccgccagcagagaaaaatccccacgactatcgccatacaaccagCAACCAGCAATCATCATCCCGGCACGCCAGCCGTAATGCAGCGCAGCCGCTGCCATCACAAt > 2:2323433‑M2/88‑149 (MQ=255) caccgaccgccggtaaacctaacgcctgcgggcgatcgcgtagccgccagcagagaaaaatccccacgactatcgccatacaaccagCAACCAGCAATCATCATCCCGGCACGCCAGCCGTAATGCAGCGCAGCCGCTGCCATCACAAt > 1:3368807‑M2/88‑149 (MQ=255) accgaccgccggtaaacctaacgcctgcgggcgatcgcgtagccgccagcagagaaaaatccccacgactatcgccatacaaccagCAACCAGCAATCATCATCCCGGCACGCCAGCCGTAATGCAGCGCAGCCGCTGCCATCACAATg < 2:2882642‑M2/63‑1 (MQ=255) cgaccgccggtaaacctaacgcctgcgggcgatcgcgtagccgccagcagagaaaaatccccacgactatcgccatacaaccagCAACCAGCAATCATCATCCCGGCACGCCAGCCGTAATGCAGCGCAGCCGCTGCCATCACAATggg < 1:2567111‑M2/65‑1 (MQ=255) accgccggtaaacctaacgcctgcgggcgatcgcgtagccgccagcagagaaaaatccccacgactatcgccatacaaccagCAACCAGCAATCATCATCCCGGCACGCCAGCCGTAATGCAGCGCAGCCGCTGCCATCACAATGGgac > 2:3711533‑M2/83‑148 (MQ=255) ccgccggtaaacctaacgcctgcgggcgatcgcgtagccgccagcagagaaaaatccccacgactatcgccatacaaccagCAACCAGCAATCATCATCCCGGCACGCCAGCCGTAATGCAGCGCAGCCGCTGCCATCACAATGGGAAt < 2:1077605‑M2/68‑1 (MQ=255) taaacctaacgcctgcgggcgatcgcgtagccgccagcagagaaaaatccccacgactatcgccatacaaccagCAACCAGCAATCATCATCCCGGCACGCCAGCCGTAATGCAGCGCAGCCGCTGCCATCACAATGGGAATGAGTgcg > 2:1606814‑M2/75‑149 (MQ=255) aaacctaacgcctgcgggcgatcgcgtagccgccagcagagaaaaatccccacgactatcgccatacaaccagCAACCAGCAATCATCATCCCGGCACGCCAGCCGTAATGCAGCGCAGCCGCTGCCATCACAATGGGAATGAGTgcgc > 1:26142‑M2/74‑149 (MQ=255) aaacctaacgcctgcgggcgatcgcgtagccgccagcagagaaaaatccccacgactatcgccatacaaccagCAACCAGCAATCATCATCCCGGCACGCCAGCCGTAATGCAGCGCAGCCGCTGCCATCACAATGGGAATGAGTgcgc < 1:505697‑M2/76‑1 (MQ=255) ccgGTAAACCTAACGCCTGCGGGCGATCGCGTAGCCGCCAGCAGAGAAAAATCCCCACGACTATCGCCATACAACCAGCAATCATCATCCCGGCACGCCAGCCGTAATGCAGCGCAGCCGCTGCCATCACAATGGGAATGAGTGcgccg > 2:453706/1‑149 (MQ=255) acctaacgcctgcgggcgatcgcgtagccgccagcagagaaaaatccccacgactatcgccatacaaccagCAACCAGCAATCATCATCCCGGCACGCCAGCCGTAATGCAGCGCAGCCGCTGCCATCACAATGGGAATGAGTGcgccg < 1:1486917‑M2/78‑1 (MQ=255) ctaacgcctgcgggcgatcgcgtagccgccagcagagaaaaatccccacgactatcgccatacaaccagCAACCAGCAATCATCATCCCGGCACGCCAGCCGTAATGCAGCGCAGCCGCTGCCATCACAATGGGAATGAGTGCgccgcc < 2:1169534‑M2/80‑1 (MQ=255) acgcctgcgggcgatcgcgtagccgccagcagagaaaaatccccacgactatcgccatacaaccagCAACCAGCAATCATCATCCCGGCACGCCAGCCGTAATGCAGCGCAGCCGCTGCCATCACAATGGGAATGAGTGCGCCGCCGAc > 2:593819‑M2/67‑149 (MQ=255) gcctgcgggcgatcgcgtagccgccagcagagaaaaatccccacgactatcgccatacaaccagCAACCAGCAATCATCATCCCGGCACGCCAGCCGTAATGCAGCGCAGCCGCTGCCATCACAATGGGAATGAGTGCGCCGCCGACGt < 2:2529932‑M2/85‑1 (MQ=255) cgggcgatcgcgtagccgccagcagagaaaaatccccacgactatcgccatacaaccagCAACCAGCAATCATCATCCCGGCACGCCAGCCGTAATGCAGCGCAGCCGCTGCCATCACAATGGGAATGAGTGCGCCGCCGACGTTATgc < 1:4285546‑M2/90‑1 (MQ=255) gggcgatcgcgtagccgccagcagagaaaaatccccacgactatcgccatacaaccagCAACCAGCAATCATCATCCCGGCACGCCAGCCGTAATGCAGCGCAGCCGCTGCCATCACAATGGGAATGAGTGCGCCGCCGACGTTATgcg > 2:2472377‑M2/59‑149 (MQ=255) ggcgatcgcgtagccgccagcagagaaaaatccccacgactatcgccatacaaccagCAACCAGCAATCATCATCCCGGCACGCCAGCCGTAATGCAGCGCAGCCGCTGCCATCACAATGGGAATGAGTGCGCCGCCGACGTTATgcgc > 2:1877286‑M2/58‑149 (MQ=255) gcgatcgcgtagccgccagcagagaaaaatccccacgactatcgccatacaaccagCAACCAGCAATCATCATCCCGGCACGCCAGCCGTAATGCAGCGCAGCCGCTGCCATCACAATGGGAATGAGTGCGCCGCCGACGTTATGCGcc > 1:3565673‑M2/57‑149 (MQ=255) cgatcgcgtagccgccagcagagaaaaatccccacgactatcgccatacaaccagCAACCAGCAATCATCATCCCGGCACGCCAGCCGTAATGCAGCGCAGCCGCTGCCATCACAATGGGAATGAGTGCGCCGCCGACGTTATGCGCCg < 2:2062962‑M2/94‑1 (MQ=255) gatcgcgtagccgccagcagagaaaaatccccacgactatcgccatacaaccagCAACCAGCAATCATCATCCCGGCACGCCAGCCGTAATGCAGCGCAGCCGCTGCCATCACAATGGGAATGAGTGCGCCGCCGACGTTATGCGCCgt > 1:1180496‑M2/55‑149 (MQ=255) atcgcgtagccgccagcagagaaaaatccccacgactatcgccatacaaccagCAACCAGCAATCATCATCCCGGCACGCCAGCCGTAATGCAGCGCAGCCGCTGCCATCACAATGGGAATGAGTGCGCCGCCGACGTTATGCGCCgtg > 1:2429438‑M2/54‑149 (MQ=255) atcgcgtagccgccagcagagaaaaatccccacgactatcgccatacaaccagCAACCAGCAATCATCATCCCGGCACGCCAGCCGTAATGCAGCGCAGCCGCTGCCATCACAATGGGAATGAGTGCGCCGCCGACGTTATGCGCCgtg < 2:482235‑M2/96‑1 (MQ=255) tcgcgtagccgccagcagagaaaaatccccacgactatcgccatacaaccagCAACCAGCAATCATCATCCCGGCACGCCAGCCGTAATGCAGCGCAGCCGCTGCCATCACAATGGGAATGAGTGCGCCGCCGACGTTATGCGCCgtgt > 1:1901233‑M2/53‑149 (MQ=255) gtagcagccagcagagaaaaatccccacgactatcgccatacaaccagCAACCAGCAATCATCATCCCGGCACGCCAGCCGTAATGCAGCGCAGCCGCTGCCATCACAATGGGAATGAGTGCGCCGCCGACGTTATGCGCCGTGTTCCa < 1:201125‑M2/101‑1 (MQ=255) tagccgccagcagagaaaaatccccacgactatcgccatacaaccagCAACCAGCAATCATCATCCCGGCACGCCAGCCGTAATGCAGCGCAGCCGCTGCCATCACAATGGGAATGAGTGCGCCGCCGACGTTATGCGCCGTGTTCCAt > 2:3557569‑M2/48‑149 (MQ=255) gccgccagcagagaaaaatccccacgactatcgccatacaaccagCAACCAGCAATCATCATCCCGGCACGCCAGCCGTAATGCAGCGCAGCCGCTGCCATCACAATGGGAATGAGTGCGCCGCCGACGTTATGCGCCGTGTTCCATaa > 1:419389‑M2/46‑149 (MQ=255) gccagcagagaaaaatccccacgactatcgccatacaaccagCAACCAGCAATCATCATCCCGGCACGCCAGCCGTAATGCAGCGCAGCCGCTGCCATCACAATGGGAATGAGTGCGCCGCCGACGTTATGCGCCGTGTTCCATAATGc < 1:3989417‑M2/107‑1 (MQ=255) cagcagagaaaaatccccacgactatcgccatacaaccagCAACCAGCAATCATCATCCCGGCACGCCAGCCGTAATGCAGCGCAGCCGCTGCCATCACAATGGGAATGAGTGCGCCGCCGACGTTATGCGCCGTGTTCCATAATGccc > 1:3140001‑M2/41‑149 (MQ=255) cagagaaaaatccccacgactatcgccatacaaccagCAACCAGCAATCATCATCCCGGCACGCCAGCCGTAATGCAGCGCAGCCGCTGCCATCACAATGGGAATGAGTGCGCCGCCGACGTTATGCGCCGTGTTCCATAATGCccacc > 2:2201566‑M2/38‑149 (MQ=255) agaaaaatccccacgactatcgccatacaaccagCAACCAGCAATCATCATCCCGGCACGCCAGCCGTAATGCAGCGCAGCCGCTGCCATCACAATGGGAATGAGTGCGCCGCCGACGTTATGCGCCGTGTTCCATAATGCCCACCAAc < 2:4094908‑M2/115‑1 (MQ=255) agaaaaatccccacgactatcgccatacaaccagCAACCAGCAATCATCATCCCGGCACGCCAGCCGTAATGCAGCGCAGCCGCTGCCATCACAATGGGAATGAGTGCGCCGCCGACGTTATGCGCCGTGTTCCATAATGCCCACCAAc < 2:2772120‑M2/115‑1 (MQ=255) aaatccccacgactatcgccatacaaccagCAACCAGCAATCATCATCCCGGCACGCCAGCCGTAATGCAGCGCAGCCGCTGCCATCACAATGGGAATGAGTGCGCCGCCGACGTTATGCGCCGTGTTCCATAATGCCCACCAAccgcc < 2:211380‑M2/119‑1 (MQ=255) aaatccccacgactatcgccatacaaccagCAACCAGCAATCATCATCCCGGCACGCCAGCCGTAATGCAGCGCAGCCGCTGCCATCACAATGGGAATGAGTGCGCCGCCGACGTTATGCGCCGTGTTCCATAATGCCCACCAAccgcc > 2:4363681‑M2/31‑149 (MQ=255) atccccacgactatcgccatacaaccagCAACCAGCAATCATCATCCCGGCACGCCAGCCGTAATGCAGCGCAGCCGCTGCCATCACAATGGGAATGAGTGCGCCGCCGACGTTATGCGCCGTGTTCCATAATGCCCACCAACcgccgc < 1:3381597‑M2/121‑1 (MQ=255) cacgactatcgccatacaaccagCAACCAGCAATCATCATCCCGGCACGCCAGCCGTAATGCAGCGCAGCCGCTGCCATCACAATGGGAATGAGTGCGCCGCCGACGTTATGCGCCGTGTTCCATAATGCCCACCAACCGCCGCGCTCg < 2:678984‑M2/126‑1 (MQ=255) acgactatcgccatacaaccagCAACCAGCAATCATCATCCCGGCACGCCAGCCGTAATGCAGCGCAGCCGCTGCCATCACAATGGGAATGAGTGCGCCGCCGACGTGATGCGCCGTGTTCCATACTGCCCACCAACCGCCGCGCTCgg > 1:4490099‑M2/23‑149 (MQ=255) gactatcgccatacaaccagCAACCAGCAATCATCATCCCGGCACGCCAGCCGTAATGCAGCGCAGCCGCTGCCATCACAATGGGAATGAGTGCGCCGCCGACGTTATGCGCCGTGTTCCATAATGCCCACCAACCGCCGCGCTCGGTa < 1:678744‑M2/129‑1 (MQ=255) actatcgccatacaaccagCAACCAGCAATCATCATCCCGGCACGCCAGCCGTAATGCAGCGCAGCCGCTGCCATCACAATGGGAATGAGTGCGCCGCCGACGTTATGCGCCGTGTTCCATAATGCCCACCAACCGCCGCGCTCGGTAc < 1:4469740‑M2/130‑1 (MQ=255) ctatcgccatacaaccagCAACCAGCAATCATCATCCCGGCACGCCAGCCGTAATGCAGCGCAGCCGCTGCCATCACAATGGGAATGAGTGCGCCGCCGACGTTATGCGCCGTGTTCCATAATGCCCACCAACCGCCGCGCTCGGTACg > 2:3345758‑M2/19‑149 (MQ=255) tatcgccatacaaccagCAACCAGCAATCATCATCCCGGCACGCCAGCCGTAATGCAGCGCAGCCGCTGCCATCACAATGGGAATGAGTGCGCCGCCGACGTTATGCGCCGTGTTCCATAATGCCCACCAACCGCCGCGCTCGGTACGt < 1:3085590‑M2/132‑1 (MQ=255) atcgccatacaaccagCAACCAGCAATCATCATCCCGGCACGCCAGCCGTAATGCAGCGCAGCCGCTGCCATCACAATGGGAATGAGTGCGCCGCCGACGTTATGCGCCGAGTTCCATAATGCCCACCAACCGCCGCGCTCGGTACGTg > 1:2467465‑M2/17‑149 (MQ=255) gccatacaaccagCAACCAGCAATCATCATCCCGGCACGCCAGCCGTAATGCAGCGCAGCCGCTGCCATCACAATGGGAATGAGTGCGCCGCCGACGTTATGCGCCGTGTTCCATAATGCCCACCAACCGCCGCGCTCGGTACGTGAAt > 2:4097299‑M2/14‑149 (MQ=255) ccatacaaccagCAACCAGCAATCATCATCCCGGCACGCCAGCCGTAATGCAGCGCAGCCGCTGCCATCACAATGGGAATGAGTGCGCCGCCGACGTTATGCGCCGTGTTCCATAATGCCCACCAACCGCCGCGCTCGGTACGTGAATa > 2:172664‑M2/13‑149 (MQ=255) catacaaccagCAACCAGCAATCATCATCCCGGCACGCCAGCCGTAATGCAGCGCAGCCGCTGCCATCACAATGGGAATGAGTGCGCCGCCGACGTTATGCGCCGTGTTCCATAATGCCCACCAACCGCCGCGCTCGGTACGTGAATAc > 2:818523‑M2/12‑149 (MQ=255) tacaaccagCAACCAGCAATCATCATCCCGGCACGCCAGCCGTAATGCAGCGCAGCCGCTGCCATCACAATGGGAATGAGTGCGCCGCCGACGTTATGCGCCGTGTTCCATAATGCCCACCAACCGCCGCGCTCGGTACGTGAATACCa > 1:3309614‑M2/10‑149 (MQ=255) caaccagCAACCAGCAATCATCATCCCGGCACGCCAGCCGTAATGCAGCGCAGCCGCTGCCATCACAATGGGAATGAGTGCGCCGCCGACGTTATGCGCCGTGTTCCATAATGCCCACCAACCGCCGCGCTCGGTACGTGAATACCAgg > 1:566533‑M2/8‑149 (MQ=255) caaccagCAACCAGCAATCATCATCCCGGCACGCCAGCCGTAATGCAGCGCAGCCGCTGCCATCACAATGGGAATGAGTGCGCCGCCGACGTTATGCGCCGTGTTCCATAATGCCCACCAACCGCCGCGCTCGGTACGTGAATACCAgg > 1:38185‑M2/8‑149 (MQ=255) aaccagCAACCAGCAATCATCATCCCGGCACGCCAGCCGTAATGCAGCGCAGCCGCTGCCATCACAATGGGAATGAGTGCGCCGCCGACGTTATGCGCCGTGTTCCATAATGCCCACCAACCGCCGCGCTCGGTACGTGAATACCAGGc < 2:4545539‑M2/143‑1 (MQ=255) aaccagCAACCAGCAATCATCATCCCGGCACGCCAGCCGTAATGCAGCGCAGCCGCTGCCATCACAATGGGAATGAGTGCGCCGCCGACGTTATGCGCCGTGTTCCATAATGCCCACCAACCGCCGCGCTCGGTACGTGAATACCAGGc > 2:25553‑M2/7‑149 (MQ=255) accagCAACCAGCAATCATCATCCCGGCACGCCAGCCGTAATGCAGCGCAGCCGCTGCCATCACAATGGGAATGAGTGCGCCGCCGACGTTATGCGCCGTGTTCCATAATGCCCACCAACCGCCGCGCTCGGTACGTGAATACCAGGcc < 2:3314897‑M2/144‑1 (MQ=255) ccagCAACCAGCAATCATCATCCCGGCACGCCAGCCGTAATGCAGCGCAGCCGCTGCCATCACAATGGGAATGAGTGCGCCGCCGACGTTATGCGCCGTGTTCCATAATGCCCACCAACCGCCGCGCTCGGTACGTGAATACCAGGCCg < 1:3571746‑M2/145‑1 (MQ=255) cagCAACCAGCAATCATCATCCCGGCACGCCAGCCGTAATGCAGCGCAGCCGCTGCCATCACAATGGGAATGAGTGCGCCGCCGACGTTATGCGCCGTGTTCCATAATGCCCACCAACCGCCGCGCTCGGTACGTGAATACCAGGCCGt < 2:548657‑M2/146‑1 (MQ=255) agCAACCAGCAATCATCATCCCGGCACGCCAGCCGTAATGCAGCGCAGCCGCTGCCATCACAATGGGAATGAGTGCGCCGCCGACGTTATGCGCCGTGTTCCATAATGCCCACCAACCGCCGCGCTCGGTACGTGAATACCAGGCCGtt > 2:2737617‑M2/3‑149 (MQ=255) gCAACCAGCAATCATCATCCCGGCACGCCAGCCGTAATGCAGCGCAGCCGCTGCCATCACAATGGGAATGAGTGCGCCGCCGACGTTATGCGCCGTGTTCCATAATGCCCACCAACCGCCGCGCTCGGTACGTGAATACCAGGCCGTTa < 1:524203‑M2/148‑1 (MQ=255) gCAACCAGCAATCATCATCCCGGCACGCCAGCCGTAATGCAGCGCAGCCGCTGCCATCACAATGGGAATGAGTGCGCCGCCGACGTTATGCGCCGTGTTCCATAATGCCCACCAACCGCCGCGCTCGGTACGTGAATACCAGGCCGTTa > 1:1009615‑M2/2‑149 (MQ=255) | GATCTCTTTACGCGTCAACCCTGCCCCTTCTTGTTGTTGAGCAATTTCCAGCGCGTCGTGTCGCCATTCACCGACCGCCGGTAAACCTAACGCCTGCGGGCGATCGCGTAGCCGCCAGCAGAGAAAAATCCCCACGACTATCGCCATACAACCAGCAATCATCATCCCGGCACGCCAGCCGTAATGCAGCGCAGCCGCTGCCATCACAATGGGAATGAGTGCGCCGCCGACGTTATGCGCCGTGTTCCATAATGCCCACCAACCGCCGCGCTCGGTACGTGAATACCAGGCCGTTA > CP009273/3841262‑3841557 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |