| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| JC JC | CP009273 | 1,428,894 | IS2 (–) +5 bp | 100% | intergenic (‑413/+317) | ynaE ← / ← ttcC | cold shock protein, Rac prophage/pseudogene, prophage Rac integration site ttcA duplication;Phage or Prophage Related |
| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | CP009273 | 1428894 = | 1 (0.010) | 249 (1.230) | 129/274 | NT | 99.6% | intergenic (‑413/+321) | ynaE/ttcC | cold shock protein, Rac prophage/pseudogene, prophage Rac integration site ttcA duplication;Phage or Prophage Related |
| ? | CP009273 | = 1463497 | NA (NA) | noncoding (1/1331 nt) | IS2 | repeat region | |||||
| * | ? | CP009273 | = 1428898 | 1 (0.010) | 217 (1.070) | 125/274 | NT | 99.5% | intergenic (‑417/+317) | ynaE/ttcC | cold shock protein, Rac prophage/pseudogene, prophage Rac integration site ttcA duplication;Phage or Prophage Related |
| ? | CP009273 | 1462167 = | NA (NA) | noncoding (1331/1331 nt) | IS2 | repeat region | |||||
Only 100 of 507 total aligned reads displayed.
TGTCGTTTCAGGTATACAGGAATGCTAACAGGTGGCGGCAAAAATCAGGCGGTTTATGGCGCAAGCTGAAGTGGCAACTGCAAACTATCTTATGCAGAGACTCTACACGGATTGGGTTTAAAAGTATACATAGATAACAGTTTTTATCTGAAGAAGAAAAATATCAAGGTGATATAGCCTATATGCCTTTGATGCGGAGGAATGAATGTGATGGGAGTGATGTATCTGAATAGTTGAAAAACCGCAGTCACGTCGTATGCAAGAACGTGCTGCGGTTGGTTTGACTTTGATTGAG > CP009273/1428747‑1429041 | atcttttcctgtgtggtacgccgtctgcgtttctccggccctaagacatcaatcatctgttctccaatgactagtctaaaaactagtattaagactatcacttatttaagtgatattggttgtctggagattcagggggccagtctac < 1:2313671‑M1/1‑1 (MQ=255)atcttttcctgtgtggtacgccgtctgcgtgtctccggccctcagacatcaatcatctgttctccaatgactagtctaaaaactagtattaagactatcacttatttaagtgatattggttgtctggagattcagggggccagtctac > 2:2942487‑M1/148‑148 (MQ=255) tCGTTTCAGGTATACAGGAATGCTAACAGGTGGCGGCAAAAATCAGGCGGTTTATGGCGCAAGCTGAAGTGGCAACTGCAAACTATCTTATGCAGAGACTCTACACGGATTGGGTTTAAAAGTATACATAGATAACAGTTTTTATCTg < 1:3539491/148‑1 (MQ=37) cGTTTCAGGTATACAGGAATGCTAACAGGTGGCGGCAAAAATCAGGCGGTTTATGGCGCAAGCTGAAGTGGCAACTGCAAACTATCTTATGCAGAGACTCTACACGGATTGGGTTTAAAAGTATACATAGATAACAGTTTTTATCTga < 1:1160393/148‑1 (MQ=37) cGTTTCAGGTATACAGGAATGCTAACAGGTGGCGGCAAAAATCAGGCGGTTTATGGCGCAAGCTGAAGTGGCAACTGCAAACTATCTTATGCAGAGACTCTACACGGATTGGGTTTAAAAGTATACATAGATAACAGTTTTTATCTga < 1:2939555/148‑1 (MQ=37) tcctgtgtggtacgccgtctgcgtttctccggccctaagacatcaatcatctgttctccaatgactagtctaaaaactagtattaagactatcacttatttaagtgatattggttgtctggagattcagggggccagtctaCTgaaga < 1:244419‑M1/7‑1 (MQ=255) tcctgtgtggtacgccgtctgcgtttctccggccctaagacatcaatcatctgttctccaatgactagtctaaaaactagtattaagactatcacttatttaagtgatattggttgtctggagattcagggggccagtctaCTgaaga > 1:425504‑M1/142‑148 (MQ=255) ctgtgtggtacgccgtctgcgtttctccggccctaagacatcaatcatctgttctccaatgactagtctaaaaactagtattaagactatcacttatttaagtgatattggttgtctggagattcagggggccagtctaCTgaagaag > 2:1719067‑M1/140‑148 (MQ=255) aGGTATACAGGAATGCTAACAGGTGGCGGCAAAAATCAGGCGGTTTATGGCGCAAGCTGAAGTGGCAACTGCAAACTATCTTATGCAGAGACTCTACACGGATTGGGTTTAAAAGTATACATAGATAACAGTTTTTATCTGAAtggat < 1:3160967‑M1/148‑6 (MQ=255) gTATACAGGAATGCTAACAGGTGGCGGCAAAAATCAGGCGGTTTATGGCGCAAGCTGAAGTGGCAACTGCAAACTATCTTATGCAGAGACTCTACACGGATTGGTTTTAAAAGTATACATAGATAACAGTTTTTATCTTAAtggattt > 1:2720113‑M1/1‑141 (MQ=255) gTATACAGGAATGCTAACAGGTGGCGGCAAAAATCAGGCGGTTTATGGCGCAAGCTGAAGTGGCAACTGCAAACTATCTTATGCAGAGACTCTACACGGATTGGGTTTAAAAGTATACATAGATAACAGTTTTTATCTGAAtggattt < 2:1462094‑M1/148‑8 (MQ=255) acgggaatGCTAACAGGTGGCGGCAAAAATCAGGCGGTTTATGGCGCAAGCTGAAGTGGCAACTGCAAACTATCTTATGCAGAGACTCTACACGGATTGGGTTTAAAAGTATACATAGATAACAGTTTTTATCTGAAtggatttgccc < 2:2472477‑M1/145‑12 (MQ=255) cAGGAATGCTAACAGGTGGCGGCAAAAATCAGGCGGTTTATGGCGCAAGCTGAAGTGGCAACTGCAAACTATCTTATGCAGAGACTCTACACGGATTGGGTTTAAAAGTATACATAGATAACAGTTTTTATCTGAAtggatttgcccc > 1:76831‑M1/1‑136 (MQ=255) ggAATGCTAACAGGTGGCGGCAAAAATCAGGCGGTTTATGGCGCAAGCTGAAGTGGCAACTGCAAACTATCTTATGCAGAGACTCTACACGGATTGGGTTTAAAAGTATACATAGATAACAGTTTTTATCTGAAtggatttgccccta > 1:2107132‑M1/1‑134 (MQ=255) gccgtctgcgtttctccggccctaagacatcaatcatctgttctccaatgactagtctaaaaactagtattaagactatcacttatttaagtgatattggttgtctggagattcagggggccagtctaCTGAAGAAGAAAAATATCaa < 2:2581876‑M1/20‑1 (MQ=255) gccgtctgcgtttctccggccctaagacatcaatcatctgttctccaatgactagtctaaaaactagtattaagactatcacttatttaagtgatattggttgtctggagattcagggggccagtctaCTGAAGAAGAAAAATATCaa > 2:2048537‑M1/129‑148 (MQ=255) gccgtctgcgtttctccggccctaagacatcaatcatctgttctccaatgactagtctaaaaactagtattaagactatcacttatttaagtgatattggttgtctggagattcagggggccagtctaCTGAAGAAGAAAAATATCaa > 2:911105‑M1/129‑148 (MQ=255) gCTAACAGGTGGCGGCAAAAATCAGGCGGTTTATGGCGCAAGCTGAAGTGGCAACTGCAAACTATCTTATGCAGAGACTCTACACGGATTGGGTTTAAAAGTATACATAGATAACAGTTTTTATCTGAAtggatttgcccctatattt < 1:328645‑M1/148‑20 (MQ=255) cAGGTGGCGGCAAAAATCAGGCGGTTTATGGCGCAAGCTGAAGTGGCAACTGCAAACTATCTTATGCAGAGACTCTACACGGATTGGGTTTAAAAGTATACATAGATAACAGTTTTTATCTGAAtggatttgcccctatatttccaga > 1:3033532‑M1/1‑124 (MQ=255) cAGGTGGCGGCAAAAATCAGGCGGTTTATGGCGCAAGCTGAAGTGGCAACTGCAAACTATCTTATGCAGAGACTCTACACGGATTGGGTTTAAAAGTATACATAGATAACAGTTTTTATCTGAAtggatttgcccctatatttccaga < 2:1052777‑M1/148‑25 (MQ=255) tGGCGGCAAAAATCAGGCGGTTTATGGCGCAAGCTGAAGTGGCAACTGCAAACTATCTTATGCAGAGACTCTACACGGATTGGGTTTAAAAGTATACATAGATAACAGTTTTTATCTGAAtggatttgcccctatatttccagacatc < 1:1866912‑M1/148‑29 (MQ=255) tccggccctaagacatcaatcatctgttctccaatgactagtctaaaaactagtattaagactatcacttatttaagtgatattggttgtctggagattcagggggccagtctaCTGAAGAAGAAAAATATCAAGGTGATATAGCCta > 1:2885885‑M1/115‑148 (MQ=255) ccggccctaagacatcaatcatctgttctccaatgactagtctaaaaactagtattaagactatcacttatttaagtgatattggttgtctggagattcagggggccagtctaCTGAAGAAGAAAAATATCAAGGTGATATAGCCtat > 1:2756027‑M1/114‑148 (MQ=255) aaaaaTCAGGCGGTTTATGGCGCAAGCTGAAGTGGCAACTGCAAACTATCTTATGCAGAGACTCTACACGGATTGGGTTTAAAAGTATACATAGATAACAGTTTTTATCTGAAtggatttgcccctatatttccagacatctgttatc < 1:1503829‑M1/148‑36 (MQ=255) aaaaTCAGGCGGTTTATGGCGCAAGCTGAAGTGGCAACTGCAAACTATCTTATGCAGAGACTCTACACGGATTGGGTTTAAAAGTATACATAGATAACAGTTTTTATCTGAAtggatttgcccctatatttccagacatctgttatca < 1:3089857‑M1/148‑37 (MQ=255) aaTCAGGCGGTTTATGGCGCAAGCTGAAGTGGCAACTGCAAACTATCTTATGCAGAGACTCTACACGGATTGGGTTTAAAAGTATACATAGATAACAGTTTTTATCTGAAtggatttgcccctatatttccagacatctgttatcact > 2:1647113‑M1/1‑110 (MQ=255) agacatcaatcatctgttctccaatgactagtctaaaaactagtattaagactatcacttatttaagtgatattggttgtctggagattcagggggccagtctaCTGAAGAAGAAAAATATCAAGGTGATATAGCCTATATGCCTTTg > 1:1560577‑M1/105‑148 (MQ=255) cAGGCGGTTTATGGCGCAAGCTGAAGTGGCAACTGCAAACTATCTTATGCAGAGACTCTACACGGATTGGGTTTAAAAGTATACATAGATAACAGTTTTTATCTGAAtggatttgcccctatatttccagacatctgttatcacttaa > 1:3443160‑M1/1‑107 (MQ=255) catcaatcatctgttctccaatgactagtctaaaaactagtattaagactatcacttatttaagtgatattggttgtctggagattcagggggccagtctaCTGAAGAAGAAAAATATCAAGGTGATATAGCCTATATGCCTTTGATg > 1:525418‑M1/102‑148 (MQ=255) catcaatcatctgttctccaatgactagtctaaaaactagtattaagactatcacttatttaagtgatattggttgtctggagattcagggggccagtctaCTGAAGAAGAAAAATATCAAGGTGATATAGCCTATATGCCTTTGATg > 1:1238224‑M1/102‑148 (MQ=255) aGGCGGTTTATGGCGCAAGCTGAAGTGGCAACTGCAAACTATCTTATGCAGAGACTCTACACGGATTGGGTTTAAAAGTATACATAGATAACAGTTTTTATCTGAAtggatttgcccctatatttccagacatctgttatcacttaac > 2:225283‑M1/1‑106 (MQ=255) aGGCGGTTTATGGCGCAAGCTGAAGTGGCAACTGCAAACTATCTTATGCAGAGACTCTACACGGATTGGGTTTAAAAGTATACATAGATAACAGTTTTTATCTGAAtggatttgcccctatatttccagacatctgttatcacttaac < 2:3328121‑M1/148‑43 (MQ=255) atcatctgttctccaatgactagtctaaaaactagtattaagactatcacttatttaagtgatattggttgtctggagattcagggggccagtctaCTGAAGAAGAAAAATATCAAGGTGATATAGCCTATATGCCTTTGATGCggag > 2:1900136‑M1/97‑148 (MQ=255) atcatctgttctccaatgactagtctaaaaactagtattaagactatcacttatttaagtgatattggttgtctggagattcagggggccagtctaCTGAAGAAGAAAAATATCAAGGTGATATAGCCTATATGCCTTTGATGCggag > 2:3446717‑M1/97‑148 (MQ=255) tttATGGCGCAAGCTGAAGTGGCAACTGCAAACTATCTTATGCAGAGACTCTACACGGATTGGGTTTAAAAGTATACATAGATAACAGTTTTTATCTGAAtggatttgcccctatatttccagacatctgttatcacttaacccatta > 1:2367923‑M1/1‑100 (MQ=255) tttATGGCGCAAGCTGAAGTGGCAACTGCAAACTATCTTATGCAGAGACTCTACACGGATTGGGTTTAAAAGTATACATAGATAACAGTTTTTATCTGAAtggatttgcccctatatttccagacatctgttatcacttaacccatta > 2:3005721‑M1/1‑100 (MQ=255) tcatctgttctccaatgactagtctaaaaactagtattaagactatcacttatttaagtgatattggttgtctggagattcagggggccagtctaCTGAAGAAGAAAAATATCAAGGTGATATAGCCTATATGCCTTTGATGCggagg > 1:381134‑M1/96‑148 (MQ=255) ttATGGCGCAAGCTGAAGTGGCAACTGCAAACTATCTTATGCAGAGACTCTACACGGATTGGGTTTAAAAGTATACATAGATAACAGTTTTTATCTGAAtggatttgcccctatatttccagacatctgttatcacttaacccattac > 2:3133086‑M1/1‑99 (MQ=255) atctgttctccaatgactagtctaaaaactagtattaagactatcacttattttagtgatattggttgtctggagattcagggggccagtctaCTGAAGAAGAAAAATATCAAGGTGATATAGCCTATATGCCTTTGATGCGGAGgaa > 2:2306593‑M1/94‑148 (MQ=255) gcgcAAGCTGAAGTGGCAACTGCAAACTATCTTATGCAGAGACTCTACACGGATTGGGTTTAAAAGTATACATAGATAACAGTTTTTATCTGAAtggatttgcccctatatttccagacatctgttatcacttaacccattacaagcc < 2:3217415‑M1/148‑55 (MQ=255) gcAAGCTGAAGTGGCAACTGCAAACTATCTTATGCAGAGACTCTACACGGATTGGGTTTAAAAGTATACATAGATAACAGTTTTTATCTGAAtggatttgcccctatatttccagacatctgttatcacttaacccattacaagcccg < 1:247792‑M1/148‑57 (MQ=255) gcAAGCTGAAGTGGCAACTGCAAACTATCTTATGCAGAGACTCTACACGGATTGGGTTTAAAAGTATACATAGATAACAGTTTTTATCTGAAtggatttgcccctatatttccagacatctgttatcacttaacccattacaagcccg < 1:2142705‑M1/148‑57 (MQ=255) cAAGCTGAAGTGGCAACTGCAAACTATCTTATGCAGAGACTCTACACGGATTGGGTTTAAAAGTATACATAGATAACAGTTTTTATCTGAAtggatttgcccctatatttccagacatctgttatcacttaacccattacaagcccgc < 1:1672698‑M1/148‑58 (MQ=255) cAAGCTGAAGTGGCAACTGCAAACTATCTTATGCAGAGACTCTACACGGATTGGGTTTAAAAGTATACATAGATAACAGTTTTTATCTGAAtggatttgcccctatatttccagacatctgttatcacttaacccattacaagcccgc > 2:708982‑M1/1‑91 (MQ=255) ccaatgactagtctaaaaactagtattaagactatcacttatttaagtgatattggttgtctggagattcagggggccagtctaCTGACGAAGAAAAATATCAAGGTGATATAGCCTATATGCCTTTGATGCGGAGGAATGAATGTGa < 1:885202‑M1/64‑1 (MQ=255) gCTGAAGTGGCAACTGCAAACTATCTTATGCAGAGACTCTACACGGATTGGGTTTAAAAGTATACATAGATAACAGTTTTTATCTGAAtggatttgcccctatatttccagacatctgttatcacttaacccattacaagcccgctgc > 2:1851905‑M1/1‑88 (MQ=255) aatgactagtctaaaaactagtattaagactatcacttatttaagtgatattggttgtctggagattcagggggccagtctaCTGAAGAAGAAAAATATCAAGGTGATATAGCCTATATGCCTTTGATGCGGAGGAATGAATGTGATg > 1:2654747‑M1/83‑148 (MQ=255) atgactagtctaaaaactagtattaagactatcacttattttagtgatattggttgtctggagattcagggggccagtctaCTGAAGAAGAAAAATATCAAGGTGATATAGCCTATATGCCTTTGATGCGGAGGAATGAATGTGATgg < 1:3377035‑M1/67‑1 (MQ=255) atgactagtctaaaaactagtattaagactatcacttattttagtgatattggttgtctggagattcagggggccagtctaCTGAAGAAGAAAAATATCAAGGTGATATAGCCTATATGCCTTTGATGCGGAGGAATGAATGTGATgg < 1:1608884‑M1/67‑1 (MQ=255) atgactagtctaaaaactagtattaagactatcacttatttaagtgatattggttgtctggagattcagggggccagtctaCTGAAGAAGAAAAATATCAAGGTGATATAGCCTATATGCCTTTGATGCGGAGGAATGAATGTGATgg < 2:2167450‑M1/67‑1 (MQ=255) tgactagtctaaaaactagtattaagactatcacttatttaagtgatattggttgtctggagattcagggggccagtctaCTGAAGAAGAAAAATATCAAGGTGATATAGCCTATATGCCTTTGATGCGGAGGAATGAATGTGATggg < 1:95867‑M1/68‑1 (MQ=255) gAAGTGGCAACTGCAAACTATCTTATGCAGAGACTCTACACGGATTGGGTTTAAAAGTATACATAGATAACAGTTTTTATCTGAAtggatttgcccctatatttccagacatctgttatcacttaacccattacaagcccgctgccgc > 2:3545761‑M1/1‑85 (MQ=255) gTGGCAACTGCAAACTATCTTATGCAGAGACTCTACACGGATTGGGTTTAAAAGTATACATAGATAACAGTTTTTATCTGAAtggatttgcccctatatttccagacatctgttatcacttaacccattacaagcccgctgccgcaga < 1:1392760‑M1/148‑67 (MQ=255) ctaaaaactagtattaagactatcacttatttaagtgatattggttgtctggagattcagggggccagtctaCTGAAGAAGAAAAATATCAAGGTGATATAGCCTATATGCCTTTGATGCGGAGGAATGAATGTGATGGGAGTGATGt > 2:3046480‑M1/73‑148 (MQ=255) aaCTATCTTATGCAGAGACTCTACACGGATTGGGTTTAAAAGTATACATAGATAACAGTTTTTATCTGAAtggatttgcccctatatttcaagacatctgttatcacttaacccattacaagcccgctgccgcagatattcccgtggc > 2:2507849‑M1/1‑70 (MQ=255) agtattaagactatcacttatttaagtgatattggttgtctggagattcagggggccagtctaCTGAAGAAGAAAAATATCAAGGTGATATAGCCTATATGCCTTTGATGCGGAGGAATGAATGTGATGGGAGTGATGTATCTGAATa < 2:415237‑M1/85‑1 (MQ=255) agtattaagactatcacttatttaagtgatattggttgtctggagattcagggggccagtctaCTGAAGAAGAAAAATATCAAGGTGATATAGCCTATATGCCTTTGATGCGGAGGAATGAATGTGATGGGAGTGATGTATCTGAATa > 2:1575342‑M1/64‑148 (MQ=255) agtattaagactatcacttatttaagtgatattggttgtctggagattcagggggccagtctaCTGAAGAAGAAAAATATCAAGGTGATATAGCCTATATGCCTTTGATGCGGAGGAATGAATGTGATGGGAGTGATGTATCTGAATa < 2:1424170‑M1/85‑1 (MQ=255) gtattaagactatcacttatttaagtgatattggttgtctggagattcagggggccagtctaCTGAAGAAGAAAAATATCAAGGTGATATAGCCTATATGCCTTTGATGCGGAGGAATGAATGTGATGGGAGTGATGTATCTGAATAg < 1:1728210‑M1/86‑1 (MQ=255) tattaagactatcacttatttaagtgatattggttgtctggagattcagggggccagtctaCTGAAGAAGAAAAATATCAAGGTGATATAGCCTATATGCCTTTGATGCGGAGGAATGAATGTGATGGGAGTGATGTATCTGAATAGt < 1:2067349‑M1/87‑1 (MQ=255) tATGCAGAGACTCTACACGGATTGGGTTTAAAAGTATACATAGATAACAGTTTTTATCTGAAtggatttgcccctatatttccagacatctgttatcacttaacccattacaagcccgctgccgcagatattcccgtggcgagcgata < 1:788941‑M1/148‑87 (MQ=255) actatcacttatttaagtgatattggttgtctggagattcagggggccagtctaCTGAAGAAGAAAAATATCAAGGTGATATAGCCTATATGCCTTTGATGCGGAGGAATGAATGTGATGGGAGTGATGTATCTGAATAGTTGaaaaa > 1:2073472‑M1/55‑148 (MQ=255) ctatcacttatttaagtgatattggttgtctggagattcagggggccagtctaCTGAAGAAGAAAAATATCAAGGTGATATAGCCTATATGCCTTTGATGCGGAGGAATGAATGTGATGGGAGTGATGTATCTGAATAGTTGAAAAAc < 2:1591548‑M1/95‑1 (MQ=255) gagaCTCTACACGGATTGGGTTTAAAAGTATACATAGATAACAGTTTTTATCTGAAtggatttgcccctatatttccagacatctgttatcacttaacccattacaagcccgctgccgcagatattcccgtggcgagcgataacccag > 1:106957‑M1/1‑56 (MQ=255) agaCTCTACACGGATTGGGTTTAAAAGTATACATAGATAACAGTTTTTATCTGAAtggatttgcccctatatttccagacatctgttatcacttaacccattacaagcccgctgccgcagatattcccgtggcgagcgataacccagc > 1:710041‑M1/1‑55 (MQ=255) cacttatttaagtgatattggttgtctggagattcagggggccagtctaCTGAAGAAGAAAAATATCAAGGTGATATAGCCTATATGCCTTTGATGCGGAGGAATGAATGTGATGGGAGTGATGTATCTGAATAGTTGAAAAACCGCa < 1:1787352‑M1/99‑1 (MQ=255) ctctACACGGATTGGGTTTAAAAGTATACATAGATAACAGTTTTTATCTGAAtggatttgcccctatatttccagacatctgttatcacttaacccattacaagcccgctgccgcagatattcccgtggcgagcgataacccagcgca < 2:1942534‑M1/148‑97 (MQ=255) ttatttaagtgatattggttgtctggagattcagggggccagtctaCTGAAGAAGAAAAATATCAAGGTGATATAGCCTATATGCCTTTGATGCGGAGGAATGAATGTGATGGGAGTGATGTATCTGAATAGTTGAAAAACCGCAGTc > 1:901022‑M1/47‑148 (MQ=255) tttaagtgatattggttgtctggagattcagggggccagtctaCTGAAGAAGAAAAATATCAAGGTGATATAGCCTATATGCCTTTGATGCGGAGGAATGAATGTGATGGGAGTGATGTATCTGAATAGTTGAAAAACCGCAGTCAcg < 2:807027‑M1/105‑1 (MQ=255) ttaagtgatattggttgtctggagattcagggggccagtctaCTGAAGAAGAAAAATATCAAGGTGATATAGCCTATATGCCTTTGATGCGGAGGAATGAATGTGATGGGAGTGTTGTATCTGAATAGTTGAAAAACCGCAGTCAcgt > 1:2590896‑M1/43‑148 (MQ=255) gtgatattggttgtctggagattcagggggccagtctaCTGAAGAAGAAAAATATCAAGGTGATATAGCCTATATGCCTTTGATGCGGAGGAATGAATGTGATGGGAGTGATGTATCTGAATAGTTGAAAAACCGCAGTCACGTCGTa > 2:1982748‑M1/39‑148 (MQ=255) gtgatattggttgtctggagattcagggggccagtctaCTGAAGAAGAAAAATATCAAGGTGATATAGCCTATATGCCTTTGATGCGGAGGAATGAATGTGATGGGAGTGATGTATCTGAATAGTTGAAAAACCGCAGTCACGTCGTa > 2:445580‑M1/39‑148 (MQ=255) gATTGGGTTTAAAAGTATACATAGATAACAGTTTTTATCTGAAtggatttgcccctatatttccagacatctgttatcacttaacccattacaagcccgctgccgcagatattcccgtggcgagcgataacccagcgcactatgcgga < 2:2384868‑M1/148‑106 (MQ=255) ttGGGTTTAAAAGTATACATAGATAACAGTTTTTATCTGAAtggatttgcccctatatttccagacatctgttatcacttaacccattacaagcccgctgccgcagatattcccgtggcgagcgataacccagcgcactatgcggatg > 2:265899‑M1/1‑41 (MQ=255) tGGGTTTAAAAGTATACATAGATAACAGTTTTTATCTGAAtggatttgcccctatatttccagacatctgttatcacttaacccattacaagcccgctgccgcagatattcccgtggcgagcgataacccagcgcactatgcggatgc < 1:3229176‑M1/148‑109 (MQ=255) tggttgtctggagattcagggggccagtctaCTGAAGAAGAAAAATATCAAGGTGATATAGCCTATATGCCTTTGATGCGGAGGAATGAATGTGATGGGAGTGATGTATCTGAATAGTTGAAAAACCGCAGTCACGTCGTATGCAAGa > 1:2224631‑M1/32‑148 (MQ=255) ttAAAAGTATACATAGATAACAGTTTTTATCTGAAtggatttgcccctatatttccagacatctgttatcacttaacccattacaagcccgctgccgcagatattcccgtggcgagcgataacccagcgcactatgcggatgccattc > 2:1561317‑M1/1‑35 (MQ=255) tAAAAGTATACATAGATAACAGTTTTTATCTGAAtggatttgcccctatatttccagacatctgttatcacttaacccattacaagcccgctgccgcagatattcccgtggcgagcgataacccagcgcactatgcggatgccattcg < 2:2751676‑M1/148‑115 (MQ=255) tctggagattctgggggccagtctaCTGAAGAAGAAAAATATCAAGGTGATATAGCCTATATGGCTTTGATGCGGAGGATTGAATGTGATGGGAGTGATGTATCTGAATAGTTGAAAAACGGCAGTCTCGTCGTATGCATGTACGtgc > 2:3429482‑M1/26‑148 (MQ=255) tctggagattcagggggccagtctaCTGAAGAAGAAAAATATCAAGGTGATATAGCCTATATGCCTTTGATGCGGAGGAATGAATGTGATGGGAGTGATGTATCTGAATAGTTGAAAAACCGCAGTCACGTCGTATGCAAGAACGtgc > 2:1664982‑M1/26‑148 (MQ=255) gTATACATAGATAACAGTTTTTATCTGAAtggatttgcccctatatttccagacatctgttatcacttaacccattacaagcccgctgccgcagatattcccgtggcgagcgataacccagcgcactatgcggatgccattcgttata < 2:563792‑M1/148‑120 (MQ=255) ctggagattcagggggccagtctaCTGAAGAAGAAAAATATCAAGGTGATATAGCCTATATGCCTTTGATGCGGAGGAATGAATGTGATGGGAGTGATGTATCTGAATAGTTGAAAAACCGCAGTCACGTCGTATGCAAGAACGtgct < 1:2395346‑M1/124‑1 (MQ=255) ggagattcagggggccagtctaCTGAAGAAGAAAAATATCAAGGTGATATAGCCTATATGCCTTTGATGCGGAGGAATGAATGTGATGGGAGTGATGTATCTGAATAGTTGAAAAACCGCAGTCACGTCGTATGCAAGAACGtgctgc < 2:489945‑M1/126‑1 (MQ=255) ataCATAGATAACAGTTTTTATCTGAAtggatttgcccctatatttccagacatctgttatcacttaacccattacaagcccgctgccgcagatattcccgtggcgagcgataacccagcgcactatgcggatgccattcgttataat > 1:1001951‑M1/1‑27 (MQ=255) agattcagggggccagtctaCTGAAGAAGAAAAATATCAAGGTGATATAGCCTATATGCCTTTGATGCGGAGGAATGAATGTGATGGGAGTGATGTATCTGAATAGTTGAAAAACCGCAGTCACGTCGTATGCAAGAACGTGCTGCgg < 1:596619‑M1/128‑1 (MQ=255) aCATAGATAACAGTTTTTATCTGAAtggatttgcccctatatttccagacatctgttatcacttaacccattacaagcccgctgccgcagatattcccgtggcgagcgataacccagcgcactatgcggatgccattcgttataatgc < 2:1258406‑M1/148‑124 (MQ=255) cagggggccagtctaCTGAAGAAGAAAAATATCAAGGTGATATAGCCTATATGCCTTTGATGCGGAGGAATGAATGTGATGGGAGTGATGTATCTGAATAGTTGAAAAACCGCAGTCACGTCGTATGCAAGAACGTGCTGCggttggt > 2:1819659‑M1/16‑148 (MQ=255) cagggggccagtctaCTGAAGAAGAAAAATATCAAGGTGATATAGCCTATATGCCTTTGATGCGGAGGAATGAATGTGATGGGAGTGATGTATCTGAATAGTTGAAAAACCGCAGTCACGTCGTATGCAAGAACGTGCTGCggttggt > 1:2995374‑M1/16‑148 (MQ=255) aTAACAGTTTTTATCTGAAtggatttgcccctatatttccagacatctgttatcacttaacccattacaagcccgctgccgcagatattcccgtggcgagcgataacccagcgcactatgcggatgccattcgttataatgctcgaac > 2:929638‑M1/1‑19 (MQ=255) tAACAGTTTTTATCTGAAtggatttgcccctatatttccagacatctgttatcacttaacccattacaagcccgctgccgcagatattcccgtggcgagcgataacccagcgcactatgcggatgccattcgttataatgctcgaacg > 2:849451‑M1/1‑18 (MQ=255) ttttATCTGAAtggatttgcccctatatttccagacatctgttatcacttaacccattacaagcccgctgccgcagatattcccgtggcgagcgataacccagcgcactatgcggatgccattcgttataatgctcgaacgcctctgc > 1:2172856‑M1/1‑11 (MQ=255) ttttATCTGAAtggatttgcccctatatttccagacatctgttatcacttaacccattacaagcccgctgccgcagatattcccgtggcgagcgataacccagcgcactatgcggatgccattcgttataatgctcgaacgcctctgc > 1:1773033‑M1/1‑11 (MQ=255) agtctaCTGAAGAAGAAAAATATCAAGGTGATATAGCCTATATGCCTTTGATGCGGAGGAATGAATGTGATGGGAGTGATGTATCTGAATAGTTGAAAAACCGCAGTCACGTCGTATGCAAGAACGTGCTGCGGTTGGTTTGACTttg > 1:486316‑M1/7‑148 (MQ=255) tttATCTGAAtggatttgcccctatatttccagacatctgttatcacttaacccattacaagcccgctgccgcagatattcccgtggcgagcgataacccagcgcactatgcggatgccattcgttataatgctcgaacgcctctgca < 1:2822367‑M1/148‑139 (MQ=255) gtctaCTGAAGAAGAAAAATATCAAGGTGATATAGCCTATATGCCTTTGATGCGGAGGAATGAATGTGATGGGAGTGATGTATCTGAATAGTTGAAAAACCGCAGTCACGTCGTATGCAAGAACGTGCTGCGGTTGGTTTGACTttga < 1:1445318‑M1/143‑1 (MQ=255) ttATCTGAAtggatttgcccctatatttccagacatctgttatcacttaacccattacaagcccgctgccgcagatattcccgtggcgagcgataacccagcgcactatgcggatgccattcgttataatgctcgaacgcctctgcaa > 1:1264637‑M1/1‑9 (MQ=255) tctaCTGAAGAAGAAAAATATCAAGGTGATATAGCCTATATGCCTTTGATGCGGAGGAATGAATGTGATGGGAGTGATGTATCTGAATAGTTGAAAAACCGCAGTCACGTCGTATGCAAGAACGTGCTGCGGTTGGTTTGACTttgat < 2:2719110‑M1/144‑1 (MQ=255) aTCTGAAtggatttgcccctatatttccagacatctgttatcacttaacccattacaagcccgctgccgcagatattcccgtggcgagcgataacccagcgcactatgcggatgccattcgttataatgctcgaacgcctctgcaagg < 1:1308435‑M1/148‑142 (MQ=255) cTGAAtggatttgcccctatatttccagacatctgttatcacttaacccattacaagcccgctgccgcagatattcccgtggcgagcgataacccagcgcactatgcggatgccattcgttataatgctcgaacgcctctgcaaggtt > 2:11625‑M1/1‑5 (MQ=255) cTGAAGAAGAAAAATATCAAGGTGATATAGCCTATATGCCTTTGATGCGGAGGAATGAATGTGATGGGAGTGATGGATCTGAATAGTTGAAAAACCGCAGTCACGTCGTATGCAAGAACGTGCTGCGGTTGGTTTGACTTTGATTgag < 2:607474/148‑1 (MQ=255) | TGTCGTTTCAGGTATACAGGAATGCTAACAGGTGGCGGCAAAAATCAGGCGGTTTATGGCGCAAGCTGAAGTGGCAACTGCAAACTATCTTATGCAGAGACTCTACACGGATTGGGTTTAAAAGTATACATAGATAACAGTTTTTATCTGAAGAAGAAAAATATCAAGGTGATATAGCCTATATGCCTTTGATGCGGAGGAATGAATGTGATGGGAGTGATGTATCTGAATAGTTGAAAAACCGCAGTCACGTCGTATGCAAGAACGTGCTGCGGTTGGTTTGACTTTGATTGAG > CP009273/1428747‑1429041 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |