mutation predictions | marginal predictions | summary statistics | genome diff | command line log
|
breseq version 0.35.4 revision f352f80f4bc9
mutation predictions | marginal predictions | summary statistics | genome diff | command line log |
| Marginal new junction evidence (sorted from low to high skew) | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | CP009273 | 3730016 = | 250 (1.110) | 3 (0.010) | 3/256 | NT | 1.3% | coding (522/825 nt) | bax | putative glucosaminidase |
| ? | CP009273 | = 3730012 | 233 (1.120) | coding (526/825 nt) | bax | putative glucosaminidase | |||||
| * | ? | CP009273 | 1716873 = | 205 (0.910) | 3 (0.010) | 3/254 | NT | 1.5% | coding (496/2013 nt) | ydhK | putative efflux protein (PET) component of YdhJK efflux pump |
| ? | CP009273 | = 1716869 | 193 (0.930) | coding (492/2013 nt) | ydhK | putative efflux protein (PET) component of YdhJK efflux pump | |||||
| * | ? | CP009273 | = 361823 | 228 (1.020) | 9 (0.040) +TTAATTAA |
7/260 | NT | 4.5% | coding (831/834 nt) | mhpR | mhp operon transcriptional activator |
| ? | CP009273 | 4033991 = | 180 (0.800) | noncoding (115/120 nt) | rrfA | 5S ribosomal RNA of rrnA operon | |||||
| * | ? | CP009273 | 361144 = | 34792 (154.970) | 10 (0.050) | 7/258 | NT | 0.030% | coding (600/1083 nt) | lacI | DNA‑binding transcriptional repressor |
| ? | CP009273 | = 361139 | 33378 (159.120) | coding (605/1083 nt) | lacI | DNA‑binding transcriptional repressor | |||||