New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? CP009273 376716 =NA (NA)31 (0.130) 22/278 NT 15.7% intergenic (‑1/‑91) yaiX/insC1 pseudogene, interrupted by IS2A, acetyltransferase homolog; nonfunctional; interruped by IS2; putative transferase/IS2 repressor TnpA
?CP009273 = 386403 167 (0.690)pseudogene (697/1458 nt) yaiT pseudogene, autotransporter family;putative structure; Not classified; interrupted by IS3; putative flagellin structural protein

Only 100 of 263 total aligned reads displayed.

CCAAGCACACAAATGAGACATTTGATACAAGTGAAGGCGTTGCTGTTAATCTTGATGTAGAAAGTAACATCAATATTTCCAATAACTCCCGCGTTGCAGGTATTGCATTATCTCAAGGTAATACTTACAACGAAACCTACACTACCGAATCTCATACTTGGGATAACAATATCTCTGTAAAAGATTCCACAGTGACTTCGGGTTCAAATTATATCCTGGATAGCAATACTTATGGCAAAACTGGTCACTTTGGCAATTCTGATGAACCGAGTGATTATGCTGGCCCGGGTGATGTTGCA  >  CP009273/386254‑386552
                                                                                                                                                     |                                                                                                                                                     
ccAAGCACACAAATGAGACATTTGATACAAGTGAAGGCGTTGCTGTTAATCTTGATGTAGAAAGTAACATCAATATTTCCAATAACTCCCGCGTTGCAGGTATTGCATTATCTCAAGGTAATACTTACAACGAAACCTACACTACCGAAt                                                                                                                                                       >  2:4650331/1‑150 (MQ=255)
 cAAGCACACAAATGAGACATTTGATACAAGTGAAGGCGTTGCTGTTAATCTTGATGTAGAAAGTAACATCAATATTTCCAATAACTCCCGCGTTGCAGGTATTGCATTATCTCAAGGTAATACTTACAACGAAACCTACACTACCGAAtc                                                                                                                                                      >  2:10636/1‑150 (MQ=255)
  aaGCACACAAATGAGACATTTGATACAAGTGAAGGCGTTGCTGTTAATCTTGATGTAGAAAGTAACATCAATATTTCCAATAACTCCCGCGTTGCAGGTATTGCATTATCTCAAGGTAATACTTACAACGAAACCTACACTACCGAATta                                                                                                                                                     <  2:3185415‑M2/150‑3 (MQ=255)
   tgcACACAAATGAGACATTTGATACAAGTGAAGGCGTTGCTGTTAATCTTGATGTAGAAAGTAACATCAATATTTCCAATAACTCCCGCGTTGCAGGTATTGCATTATCTCAAGGTAATACTTACAACGAAACCTACACTACCGAATtag                                                                                                                                                    <  1:149643‑M2/149‑4 (MQ=255)
     cttgcagaggcgttcgagcattataacgaatggcatccgcatagtgcgctgggttatcgctcgccacgggaatatctgcggcagcgggcttgtaatgggttaagtgataacagatgtctggaaatataggggcaaatccaCGAATCTCAt                                                                                                                                                  <  1:4550086‑M2/10‑1 (MQ=255)
     cacacaAATGAGACATTTGATACAAGTGAAGGCGTTGCTGTTAATCTTGATGTAGAAAGTAACATCAATATTTCCAATAACTCCCGCGTTGCAGGTATTGCATTATCTCAAGGTAATACTTACAACGAAACCTACACTACCGAATCTCAt                                                                                                                                                  <  1:1040497/150‑1 (MQ=255)
     cacacaAATGAGACATTTGATACAAGTGAAGGCGTTGCTGTTAATCTTGATGTAGAAAGTAACATCAATATTTCCAATAACTCCCGCGTTGCAGGTATTGCATTATCTCAAGGTAATACTTACAACGAAACCTACACTACCGAATCTCAt                                                                                                                                                  >  1:47518/1‑150 (MQ=255)
         caAATGAGACATTTGATACAAGTGAAGGCGTTGCTGTTAATCTTGATGTAGAAAGTAACATCAATATTTCCAATAACTCCCGCGGTGCAGGTATTGCATTATCTCAAGGTAATACTTACAACGAAACCTACACTACCGAATCTCATACtt                                                                                                                                              <  2:3142909/150‑1 (MQ=255)
            aTGAGACATTTGATACAAGTGAAGGCGTTGCTGTTAATCTTGATGTAGAAAGTAACATCAATATTTCCAATAACTCCCGCGTTGCAGGTATTGCATTATCTCAAGGTAATACTTACAACGAAACCTACACTACCGAATCTCATACTTggg                                                                                                                                           >  1:3541587/1‑150 (MQ=255)
              tagaCATTTGATACAAGTGAAGGCGTTGCTGTTAATCTTGATGTAGAAAGTAACATCAATATTTCCAATAACTCCCGCGTTGCAGGTATTGCATTATCTCAAGGTAATACTTACAACGAAACCTACACTACCGAATCTCATACTTGGGAt                                                                                                                                         >  1:3443349/2‑150 (MQ=255)
                     agcattataacgaatggcatccgcatagtgcgctgggttatcgctcgccacgggaatatctgcggcagcgggcttgtaatgggttaagtgataacagatgtctggaaatataggggcaaatccaCGAATCTCATACTTGGGATAACAata                                                                                                                                  <  2:4374581‑M2/26‑1 (MQ=255)
                      tGATACAAGTGAAGGCGTTGCTGTTAATCTTGATGTAGAAAGTAACATCAATATTTCCAATAACTCCCGCGTTGCAGGTATTGCATTATCTCAAGGTAATACTTACAACGAAACCTACACTACCGAATCTCATACTTGGGATAACAatat                                                                                                                                 <  2:3380398/150‑1 (MQ=255)
                      tGATACAAGTGAAGGCGTTGCTGTTAATCTTGATGTAGAAAGTAACATCAATATTTCCAATAACTCCCGCGTTGCAGGTATTGCATTATCTCAAGGTAATACTTACAACGAAACCTACACTACCGAATCTCATACTTGGGATAACAatat                                                                                                                                 >  2:3904208/1‑150 (MQ=255)
                       gATACAAGTGAAGGCGTTGCTGTTAATCTTGATGTAGAAAGTAACATCAATATTTCCAATAACTCCCGCGTTGCAGGTATTGCATTATCTCAAGGTAATACTTACAACGAAACCTACACTACCGAATCTCATACTTGGGATAACAATAtc                                                                                                                                <  2:412089/150‑1 (MQ=255)
                         ttataacgaatggcatccgcatagtgcgctgggttatcgctcgccacgggaatatctgcggcagcgggcttgtaatgggttaagtgataacagatgtctggaaatataggggcaaatccaCGAATCTCATACTTGGGATAACAATAtctc                                                                                                                              >  1:2838997‑M2/121‑150 (MQ=255)
                          tataacgaatggcatccgcatagtgcgctgggttatcgctcgccacgggaatatctgcggcagcgggcttgtaatgggttaagtgataacagatgtctggaaatataggggcaaatccaCGAATCTCATACTTGGGATAACAATATctct                                                                                                                             <  1:3072580‑M2/31‑1 (MQ=255)
                          aCAAGTGAAGGCGTTGCTGTTAATCTTGATGTAGAAAGTAACATCAATATTTCCAATAACTCCCGCGTTGCAGGTATTGCATTATCTCAAGGTAATACTTACAACGAAACCTACACTACCGAATCTCATACTTGGGATAACAATATctct                                                                                                                             <  1:3312979/150‑1 (MQ=255)
                           cAAGTGAAGGCGTTGCTGTTAATCTTGATGTAGAAAGTAACATCAATATTTCCAATAACTCCCGCGTTGCAGGTATTGCATTATCTCAAGGTAATACTTACAACGAAACCTACACTACCGAATtagactggccccctgaatctccagaca                                                                                                                            >  1:4681621‑M2/1‑123 (MQ=255)
                           cAAGTGAAGGCGTTGCTGTTAATCTTGATGTAGAAAGTAACATCAATATTTCCAATAACTCCCGCGTTGCAGGTATTGCATTATCTCAAGGTAATACTTACAACGAAACCTACACTACCGAATtagactggccccctgaatctccagaca                                                                                                                            >  1:3664272‑M2/1‑123 (MQ=255)
                           ataacgaatggcatccgcatagtgcgctgggttatcgctcgccacgggaatatctgcggcagcgggcttgtaatgggttaagtgataacagatgtctggaaatataggggcaaatccaCGAATCTCATACTTGGGATAACAATATCTCTg                                                                                                                            >  2:3454772‑M2/119‑150 (MQ=255)
                            taacgaatggcatccgcatagtgcgctgggttatcgctcgccacgggaatatctgcggcagcgggcttgtaatgggttaagtgataacagatgtctggaaatataggggcaaatccaCGAATCTCATACTTGGGATAACAATATCTCTGt                                                                                                                           <  2:3958806‑M2/33‑1 (MQ=255)
                            aaGTGAAGGCGTTGCTGTTAATCTTGATGTAGAAAGTAACATCAATATTTCCAAGAACTCCCGCGTTGCAGGTATTGCATTATCTCAAGGTAATACTTACAACGAAACCTACACTACCGAATCTCATACTTGGGATAACAATATCTCTGt                                                                                                                           <  2:4393843/150‑1 (MQ=255)
                                gaatggcatccgcatagtgcgctgggttatcgctcgccacgggaatatctgcggcagcgggcttgtaatgggttaagtgataacagatgtctggaaatataggggcaaatccaCGAATCTCATACTTGGGATAACAATATCTCTGTaaaa                                                                                                                       >  1:2161473‑M2/114‑150 (MQ=255)
                                      gTTGCTGTTAATCTTGATGTAGAAAGTAACATCAATATTTCCAATAACTCCCGCGTTGCAGGTATTGCATTATCTCAAGGTAATACTTACAACGAAACCTACACTACCGAATCTCATACTTGGGATAACAATATCTCTGTAAAAGATTcc                                                                                                                 >  2:1648809/1‑150 (MQ=255)
                                       ttGCTGTTAATCTTGATGTAGAAAGTAACATCAATATTTCCAATAACTCCCGCGTTGCAGGTATTGCATTATCTCAAGGTAATACTTACAACGAAACCTACACTACCGAATCTCATACTTGGGATAACAATATCTCTGTAAAAGATTCca                                                                                                                >  1:3683682/1‑150 (MQ=255)
                                       atccgcatagtgcgctgggttatcgctcgccacgggaatatctgcggcagcgggcttgtaatgggttaagtgataacagatgtctggaaatataggggcaaatccaCGAATCTCATACTTGGGATAACAATATCTCTGTAAAAGATTCca                                                                                                                <  2:2772176‑M2/44‑1 (MQ=255)
                                        tccgcatagtgcgctgggttatcgctcgccacgggaatatctgcggcagcgggcttgtaatgggttaagtgataacagatgtctggaaatataggggcaaatccaCGAATCTCATACTTGGGATAACAATATCTCTGTAAAAGATTCcac                                                                                                               >  1:2632523‑M2/106‑150 (MQ=255)
                                        tccgcatagtgcgctgggttatcgctcgccacgggaatatctgcggcagcgggcttgtaatgggttaagtgataacagatgtctggaaatataggggcaaatccaCGAATCTCATACTTGGGATAACAATATCTCTGTAAAAGATTCcac                                                                                                               >  1:2632307‑M2/106‑150 (MQ=255)
                                         gCTGTTAATCTTGATGTAGAAAGTAACATCAATATTTCCAATAACTCCCGCGTTGCAGGTATTGCATTATCTCAAGGTAATACTTACAACGAAACCTACACTACCGAATCTCATACTTGGGATAACAATATCTCTGTAAAAGATTCcaca                                                                                                              >  1:5095646/1‑150 (MQ=255)
                                             atagtgcgctgggttatcgctcgccacgggaatatctgcggcagcgggcttgtaatgggttaagtgataacagatgtctggaaatataggggcaaatccaCGAATCTCATACTTGGGATAACAATATCTCTGTAAAAGATTCCACAGTGa                                                                                                          <  2:40516‑M2/50‑1 (MQ=255)
                                             atagtgcgctgggttatcgctcgccacgggaatatctgcggcagcgggcttgtaatgggttaagtgataacagatgtctggaaatataggggcaaatccaCGAATCTCATACTTGGGATAACAATATCTCTGTAAAAGATTCCACAGTGa                                                                                                          <  2:4112362‑M2/50‑1 (MQ=255)
                                             atagtgcgctgggttatcgctcgccacgggaatatctgcggcagcgggcttgtaatgggttaagtgataacagatgtctggaaatataggggcaaatccaCGAATCTCATACTTGGGATAACAATATCTCTGTAAAAGATTCCACAGTGa                                                                                                          <  2:1516465‑M2/50‑1 (MQ=255)
                                              tAATCTTGATGTAGAAAGTAACATCAATATTTCCAATAACTCCCGCGTTGCAGGTATTGCATTATCTCACGGTAATACTTACAACGAAACCTACACTACCGAATCTCATACTTGGGATAACAATATCTCTGTAAAAGATTCCACAGTGAc                                                                                                         <  1:1518024/150‑1 (MQ=255)
                                              tAATCTTGATGTAGAAAGTAACATCAATATTTCCAATAACTCCCGCGTTGCAGGTATTGCATTATCTCAAGGTAATACTTACAACGAAACCTACACTACCGAATCTCATACTTGGGATAACAATATCTCTGTAAAAGATTCCACAGTGAc                                                                                                         >  1:3889872/1‑150 (MQ=255)
                                              tAATCTTGATGTAGAAAGTAACATCAATATTTCCAATAACTCCCGCGTTGCAGGTATTGCATTATCTCAAGGTAATACTTACAACGAAACCTACACTACCGAATCTCATACTTGGGATAACAATATCTCTGTAAAAGATTCCACAGTGAc                                                                                                         >  2:495288/1‑150 (MQ=255)
                                               aaTCTTGATGTAGAAAGTAACATCAATATTTCCAATAACTCCCGCGTTGCAGGTATTGCATTATCTCAAGGTAATACTTACAACGAAACCTACACTACCGAATCTCATACTTGGGATAACAATATCTCTGTAAAAGATTCCACAGTGACt                                                                                                        >  1:30383/1‑150 (MQ=255)
                                                 tCTTGATGTAGAAAGTAACATCAATATTTCCAATAACTCCCGCGTTGCAGGTATTGCATTATCTCAAGGTAATACTTACAACGAAACCTACACTACCGAATtagactggccccctgaatctccagacaaccaataacacttaaataagtg                                                                                                      >  2:3053679‑M2/1‑101 (MQ=255)
                                                     gATGTAGAAAGTAACATCAATATTTCCAATAACTCCCGCGTTGCAGGTATTGCATTATCTCAAGGTAATACTTACAACGAAACCTACACTACCGAATCTCATACTTGGGATAACAATATCTCTGTAAAAGATTCCACAGTGACTTCGGGt                                                                                                  <  2:5110210/150‑1 (MQ=255)
                                                     ctgggttatcgctcgccacgggaatatctgcggcagcgggcttgtaatgggttaagtgataacagatgtctggaaatataggggcaaatccaCGAATCTCATACTTGGGATAACAATATCTCTGTAAAAGATTCCACAGTGACTTCGGGt                                                                                                  <  1:3181095‑M2/58‑1 (MQ=255)
                                                       tGTAGAAAGTAACATCAATATTTCCAATAACTCCCGCGTTGCAGGTATTGCATTATCTCAAGGTAATACTTACAACGAAACCTACACTACCGAATtagactggccccctgaatctccagacaaccaatatcacttaaataagtgatagtc                                                                                                <  1:4720812‑M2/150‑56 (MQ=255)
                                                         tAGAAAGTAACATCAATATTTCCAATAACTCCCGCGTTGCAGGTATTGCATTATCTCAAGGTAATACTTACAACGAAACCTACACTACCGAATCTCATACTTGGGATAACAATATCTCTGTAAAAGATTCCACAGTGACTTCGGGTTCaa                                                                                              >  2:4809352/1‑150 (MQ=255)
                                                         tAGAAAGTAACATCAATATTTCCAATAACTCCCGCGTTGCAGGTATTGCATTATCTCAAGGTAATACTTACAACGAAACCTACACTACCGAATCTCATACTTGGGATAACAATATCTCTGTAAAAGATTCCACAGTGACTTCGGGTTCaa                                                                                              <  2:2416741/150‑1 (MQ=255)
                                                         tAGAAAGTAACATCAATATTTCCAATAACTCCCGCGTTGCAGGTATTGCATTATCTCAAGGTAATACTTACAACGAAACCTACACTACCGAATCTCATACTTGGGATAACAATATCTCTGTAAAAGATTCCACAGTGACTTCGGGTTCaa                                                                                              >  2:567120/1‑150 (MQ=255)
                                                          aGAAATTAACATCAATATTTCCAATAACTCCCGCGTTGCAGGTATTGCATTAGCTCCAGGTAATACTTAAAACGAAACCTACCCTACCGAATtagactggccccctgaatctccagacaaccaatatcacttaaataagtgatagtctta                                                                                             >  1:1753537‑M2/1‑92 (MQ=255)
                                                          aGAAAGTAACATCAATATTTCCAATAACTCCCGCGTTGCAGGTATTGCATTATCTCAAGGTAATACTTACAACGAAACCTACACTACCGAATtagactggccccctgaatctccagacaaccaatatcacttaaataagtgatagtctta                                                                                             >  2:4265410‑M2/1‑92 (MQ=255)
                                                          aGAAAGTAACATCAATATTTCCAATAACTCCCGCGTTGCAGGTATTGCATTATCTCAAGGTAATACTTACAACGAAACCTACACTACCGAATCTCATACTTGGGATAACAATATCTCTGTAAAAGATTCCACAGTGACTTCGGGTTCaaa                                                                                             <  2:4423320/150‑1 (MQ=255)
                                                             aaGTAACATCAATATTTCCAATAACTCCCGCGTTGCAGGTATTGCATTATCTCAAGGTAATACTTACAACGAAACCTACACTACCGAATCTCATACTTGGGATAACAATATCTCTGTAAAAGATTCCACAGTGACTTCGGGTTCAAATta                                                                                          >  2:2796348/1‑150 (MQ=255)
                                                                 aaCATCAATATTTCCAATAACTCCCGCGTTGCAGGTATTGCATTATCTCAAGGTCATACTTACAACGAAACCTACACTACCGAATCTCATACTTGGGATAACAATATCTCTGTAAAAGATTCCACAGTGACTTCGGGTTCAAATTATATc                                                                                      >  1:656608/1‑150 (MQ=255)
                                                                  aCATCAATATTTCCAATAACTCCCGCGTTGCAGGTATTGCATTATCTCCAGGTAATACTTACAACGAAACCTACACTACCGAATCTCATACTTGGGATAACAATATCTCTGTAAAAGATTCCACAGTGACTTCGGGTTCAAATTATATcc                                                                                     <  1:1971531/150‑1 (MQ=255)
                                                                    aTCAATATTTCCAATAACTCCCGCGTTGCAGGTATTGCATTATCTCCAGGTAATACTTACAACGAAACCTACACTACCGAATtagactggccccctgaatctccagacaaccaatatcacttaaataagtgatagtcttaatactagttt                                                                                   >  1:4455661‑M2/1‑82 (MQ=255)
                                                                     tCAATATTTCCAATAACTCCCGCGTTGCAGGTATTGCATTATCTCAAGGTAATACTTACAACGAAACCTACACTACCGAATCTCATACTTGGGATAACAATATCTCTGTAAAAGATTCCACAGTGACTTCGGGTTCAAATTATATCCTgg                                                                                  >  2:660956/1‑150 (MQ=255)
                                                                      cAATATTTCCAATAACTCCCGCGTTGCAGGTATTGCATTATCTCAAGGTAATACTTACAACGAAACCTACACTACCGAATtagactggccccctgaatctccagacaaccaatatcacttaaataagtgatagtcttaatactagttttt                                                                                 >  2:1782736‑M2/1‑80 (MQ=255)
                                                                       cgggaatatctgcggcagcgggcttgtaatgggttaagtgataacagatgtctggaaatataggggcaaatccaCGAATCTCATACTTGGGATAACAATATCTCTGTAAAAGATTCCACAGTGACTTCGGGTTCAAATTATATCCTGGAt                                                                                >  1:995762‑M2/75‑150 (MQ=255)
                                                                       cgggaatatctgcggcagcgggcttgtaatgggttaagtgataacagatgtctggaaatataggggcaaatccaCGAATCTCATACTTGGGATAACAATATCTCTGTAAAAGATTCCACAGTGACTTCGGGTTCAAATTATATCCTGGAt                                                                                >  1:1391969‑M2/75‑150 (MQ=255)
                                                                       aaTATTTCCAATAACTCCCGCGTTGCAGGTATTGCATTATCTCAAGGTAATACTTACAACGAAACCTACACTACCGAATCTCATACTTGGGATAACAATATCTCTGTAAAAGATTCCACAGTGACTTCGGGTTCAAATTATATCCTGGAt                                                                                <  1:2517461/150‑1 (MQ=255)
                                                                        gggaatatctgcggcagcgggcttgtaatgggttaagtgataacagatgtctggaaatataggggcaaatccaCGAATCTCATACTTGGGATAACAATATCTCTGTAAAAGATTCCACAGTGACTTCGGGTTCAAATTATATCCTGGATa                                                                               <  1:121486‑M2/77‑1 (MQ=255)
                                                                          atTTCCAATAACTCTCGCGTTGAAGGTATTGTATTATCTCATGTTATTTCTTACAACGAAACCTACACTACCGAATCTCATACTTGGGATAACTATATCTCTGTAAAAGATTCCACAGTGACTTCTGGTTCAAATTATATCCTGGATAGc                                                                             <  2:2960768/150‑1 (MQ=255)
                                                                          atTTCCAATAACTCCCGCGTTGCAGGTATTGCATTATCTCAAGGTAATACTTACAACGAAACCTACACTACCGAATCTCATACTTGGGCTAACAATATCTCTGTAAAAGATTCCACAGTGACTTCGGGTTCAAATTATATCCTGGATAGc                                                                             >  2:3618830/1‑150 (MQ=255)
                                                                          atTTCCAATAACTCCCGCGTTGCAGGTATTGCATTATCTCAAGGTAATACTTACAACGAAACCTACACTACCGAATCTCATACTTGGGATAACAATATCTCTGTAAAAGATTCCACAGTGACTTCGGGTTCAAATTATATCCTGGATAGc                                                                             <  1:4363722/150‑1 (MQ=255)
                                                                           tttCCAATAACTCCCGCGTTGCAGGTATTGCATTATCTCAAGGTAATACTTACAACGAAACCTACACTACCGAATtagactggccccctgaatctccagacaaccaatatcacttaaataagtgatagtcttaatactagtttttagact                                                                            >  2:3823930‑M2/1‑75 (MQ=255)
                                                                           tttCCAATAACTCCCGCGTTGCAGGTATTGCATTATCTCAAGGTAATACTTACAACGAAACCTACACTACCGAATCTCATACTTGGGATAACAATATCTCTGTAAAAGATTCCACAGTGACTTCGGGTTCAAATTATATCCTGGATAGCa                                                                            <  1:2138156/150‑1 (MQ=255)
                                                                           aatatctgcggcagcgggcttgtaatgggttaagtgataacagatgtctggaaatataggggcaaatccaCGAATCTCATACTTGGGATAACAATATCTCTGTAAAAGATTCCACAGTGACTTCGGGTTCAAATTATATCCTGGATAGCa                                                                            <  2:2143119‑M2/80‑1 (MQ=255)
                                                                            ttCCAATAACTCCCGCGTTGCAGGTATTGCATTATCTCAAGGTAATACTTACAACGAAACCTACACTACCGAATCTCATACTTGGGATAACAATATCTCTGTAAAAGATTCCACAGTGACTTCGGGTTCAAATTATATCCTGGATAGCaa                                                                           >  2:1397918/1‑150 (MQ=255)
                                                                             tCCAATAACTCCCGCGTTGCAGGTATTGCATTATCTCAAGGTAATACTTACAACGAAACCTACACTACCGAATCTCATACTTGGGATAACAATATCTCTGTAAAAGATTCCACAGTGACTTCGGGTTCAAATTATATCCTGGATAGCAAt                                                                          >  1:2116449/1‑150 (MQ=255)
                                                                              ccAATAACTCCCGCGTTGCAGGTATTGCATTATCTCAAGGTAATACTTACAACGAAACCTACACTACCGAATCTCATACTTGGGATAACAATATCTCTGTAAAAGATTCCACAGTGACTTCGGGTTCAAATTATATCCTGGATAGCAATa                                                                         <  2:876554/150‑1 (MQ=255)
                                                                                aaTAACTCCCGCGTTGCAGGTATTGCATTATCTCAAGGTAATACTTACAACGAAACCTACACTACCGAATCTCATACTTGGGATAACAATATCTCTGTAAAAGATTCCACAGTGACTTCGGGTTCAAATTATATCCTGGATAGCAATACt                                                                       <  1:4863185/150‑1 (MQ=255)
                                                                                aaTAACTCCCGCGTTGCAGGTATTGCATTATCTCAAGGTAATACTTACAACGAAACCTACACTACCGAATCTCATACTTGGGATAACAATATCTCTGTAAAAGATTCCACAGTGACTTCGGGTTCAAATTATATCCTGGATAGCAATACt                                                                       <  1:2724350/150‑1 (MQ=255)
                                                                                   aaCTCCCGCGTTGCAGGTATTGCATTATCTCAAGGTAATACTTACAACGAAACCTACACTACCGAATCTCATACTTGGGATAACAATATCTCTGTAAAAGATTCCACAGTGACTTCGGGTTCAAATTATATCCTGGATAGCAATACTTAt                                                                    <  1:3716851/150‑1 (MQ=255)
                                                                                   aaCTCCCGCGTTGCAGGTATTGCATTATCTCAAGGTAATACTTACAACGAAACCTACACTACCGAATCTCATACTTGGGATAACAATATCTCTGTAAAAGATTCCACAGTGACTTCGGGTTCAAATTATATCCTGGATAGCAATACTTAt                                                                    >  1:1225548/1‑150 (MQ=255)
                                                                                      tCCCGCGTTGCAGGTATTGCATTATCTCAAGGTAATACTTACAACGAAACCTACACTACCGAATCTCATACTTGGGATAACAATATCTCTGTAAAAGATTCCACAGTGACTTCGGGTTCAAATTATATCCTGGATAGCAATACTTATGGc                                                                 >  2:3093653/1‑150 (MQ=255)
                                                                                           cgTTGCAGGTATTGCATTATCTCAAGGTAATACTTACAACGAAACCTACACTACCGAATCTCATACTTGGGATAACAATATCTCTGTAAAAGATTCCACAGTGACTTCGGGTTCAAATTATATCCTGGATAGCAATACTTATGGCAAAAc                                                            >  1:4688848/1‑150 (MQ=255)
                                                                                               gCAGGTATTGCATTATCTCAAGGTAATACTTACAACGAAACCTACACTACCGAATCTCATACTTGGGATAACAATATCTCTGTAAAAGATTCCACAGTGACTTCGGGTTCAAATTATATCCTGGATAGCAATACTTATGGCAAAACTGGt                                                        <  2:2093480/150‑1 (MQ=255)
                                                                                                 aGGTATTGCATTATCTCAAGGTAATACTTACAACGAAACCTACACTACCGAATCTCATACTTGGGATAACAATATCTCTGTAAAAGATTCCACAGTGACTTCGGGTTCAAATTATATCCTGGATAGCAATACTTATGGCAAAACTGGTCa                                                      <  1:3358342/150‑1 (MQ=255)
                                                                                                   gTATTGCATTATCTCAAGGTAATACTTACAACGAAACCTACACTACCGAATCTCATACTTGGGATAACAATATCTCTGTAAAAGATTCCACAGTGACTTCGGGTTCAAATTATATCCTGGATAGCACTACTTATGGCAAAACTGGTCACt                                                    >  2:1972119/1‑150 (MQ=255)
                                                                                                      ttGCATTATCTCAAGGTAATACTTACAACGAAACCTACACTACCGAATCTCATACTTGGGATAACAATATCTCTGTAAAAGATTCCACAGTGACTTCGGGTTCAAATTATATCCTGGATAGCAATACTTATGGCAAAACTGGTCACTTTg                                                 >  2:2656862/1‑150 (MQ=255)
                                                                                                      ggttaagtgataacagatgtctggaaatataggggcaaatccaCGAATCTCATACTTGGGATAACAATATCTCTGTAAAAGATTCCACAGTGACTTCGGGTTCAAATTATATCCTGGATAGCAATACTTATGGCAAAACTGGTCACTTTg                                                 >  1:224771‑M2/44‑150 (MQ=255)
                                                                                                       gttaagtgataacagatgtctggaaatataggggcaaatccaCGAATCTCATACTTGGGATAACAATATCTCTGTAAAAGATTCCACAGTGACTTCGGGTTCAAATTATATCCTGGATAGCAATACTTATGGCAAAACTGGTCACTTTgg                                                >  1:915513‑M2/43‑150 (MQ=255)
                                                                                                         cATTATCTAAATTTAATACTTACAACGAAACCTACACTACCGAATCTCATACTTTGTATAACAATATCTCTGTAAAAGATTCCACAGTGACTTCGGGTTCAAATTATATCCTGGTTAGCAATACTTATGGCAAAACTGGTCACTTTGGCa                                              <  2:2256836/150‑1 (MQ=255)
                                                                                                          aTTATCTCAAGGTAATACTTACAACGAAACCTACACTACCGAATCTCATACTTGGGATAACAATATCTCTGTAAAAGATTCCACAGTGACTTCGGGTTCAAATTATATCCTGGATAGCAATACTTATGGCAAAACTGGTCACTTTGGCac                                             >  2:2359130/1‑149 (MQ=255)
                                                                                                           agtgataacagatgtctggaaatatagggtcaaatccaCGAATCTCATACTTGGGATAACAATATCTCTGTAAAAGATTCCACAGTGACTTCGGTTTCAAATTATATCCTGGATAGCAATACTTATGGCAAAACTGGACACTTTGGCAAt                                            >  1:4263439‑M2/39‑150 (MQ=255)
                                                                                                            tATCTCACGGTAATACTTACAACGAAACCTACACTACCGAATCTCATACTTGGGATAACAATATCTCTGTAAAAGATTCCACAGTGACTTCGGGTTCAAATTATATCCTGGATAGCAATACTTATGGCAAAACTGGTCACTTTGGCAAtt                                           <  1:957731/150‑1 (MQ=255)
                                                                                                                 cAAGGTAATACTTACAACGAAACCTACACTACCGAATCTCATACTTGGGATAACAATATCTCTGTAAAAGATTCCACAGTGACTTCGGGTTCAAATTATATCCTGGATAGCAATACTTATGGCAAAACTGGTCACTTTGGCAATTCtgat                                      <  2:414391/150‑1 (MQ=255)
                                                                                                                 aacagatgtctggaaatataggggcaaatccaCGAATCTCATACTTGGGATAACAATATCTCTGTAAAAGATTCCACAGTGACTTCGGGTTCAAATTATATCCTGGATAGCAATACTTATGGCAAAACTGGTCACTTTGGCAATTCtgat                                      >  2:203623‑M2/33‑150 (MQ=255)
                                                                                                                  aaGGTAATACTTACAACGAAACCTACACTACCGAATCTCATACTTGGGATAACAATATCTCTGTAAAAGATTCCACAGTGACTTCGGGTTCAAATTATATCCTGGATAGCAATACTTATGGCAAAACTGGTCACTTTGGCAATTCtgatg                                     <  2:3321552/150‑1 (MQ=255)
                                                                                                                    ggTAATACTTACAACGAAACCTACACTACCGAATCTCATACTTGGGATAACAATATCTCTGTAAAAGATTCCACAGTGACTTCGGGTTCAAATTATATCCTGGATAGCAATACTTATGGCAAAACTGGTCACTTTGGCAATTCTGATGaa                                   >  2:4198354/1‑150 (MQ=255)
                                                                                                                      tAATACTTACAACGAAACCTACACTACCGAATCTCATACTTGGGATAACAATATCTCTGTAAAAGATTCCACAGTGACTTCGGGTTCAAATTATATCCTGGATAGCAATACTTATGGCAAAACTGGTCACTTTGGCAATTCTGATGAAcc                                 >  1:4946584/1‑150 (MQ=255)
                                                                                                                      tAATACTTACAACGAAACCTACACTACCGAATCTCATACTTGGGATAACAATATCTCTGTAAAAGATTCCACAGTGACTTCGGGTTCAAATTATATCCTGGATAGCAATACTTATGGCAAAACTGGTCACTTTGGCAATTCTGATGAAcc                                 <  1:3911187/150‑1 (MQ=255)
                                                                                                                      tAATACTTACAACGAAACCTACACTACCGAATCTCATACTTGGGATAACAATATCTCTGTAAAAGATTCCACAGTGACTTCGGGTTCAAATTATATCCTGGATAGCAATACTTATGGCAAAACTGGTCACTTTGGCAATTCTGATGAAcc                                 >  1:502783/1‑150 (MQ=255)
                                                                                                                            ttACAACGAAACCTACACTACCGAATCTCATACTTGGGATAACAATATCTCTGTAAAAGATTCCACAGTGACTTCGGGTTCAAATTATATCCTGGATAGCAATACTTATGGCAAAACTGGTCACTTTGGCAATTCTGATGAACCGAGTGa                           <  1:772856/150‑1 (MQ=255)
                                                                                                                                  cGAAACCTACACTACCGAATCTCATACTTGGGATAACAATATCTCTGTAAAAGATTCCACAGTGACTTCGGGTTCAAATTATATCCTGGATAGCAATACTTATGGCAAAACTGGTCACTTTGGCAATTCTGATGAACCGAGTGATTATGc                     >  1:1857542/1‑150 (MQ=255)
                                                                                                                                     aaCCTACACTACCGAATCTCATACTTGGGATAACAATATCTCTGTAAAAGATTCCACAGTGACTTCGGGTTCAAATTATATCCTGGATAGCAATACTTATGGCAAAACTGGTCACTTTGGCAATTCTGATGAACCGAGTGATTATGCTgg                  <  2:871163/150‑1 (MQ=255)
                                                                                                                                       ccTACACTACCGAATCTCATACTTGGGATAACAATATCTCTGTAAAAGATTCCACAGTGACTTCGGGTTCAAATTATATCCTGGATAGCAATACTTATGGCAAAACTGGTCACTTTGGCAATTCTGATGAACCGAGTGATTATGCTGGcc                <  1:4356014/150‑1 (MQ=255)
                                                                                                                                        cTACACTACCGAATCTCATACTTGGGATAACAATATCTCTGTAAAAGATTCCACAGTGACTTCGGGTTCAAATTATATCCTGGATAGCAATACTTATGGCAAAACTGGTCACTTTGGCAATTCTGATGAACCGAGTGATTCTGCTGGccc               >  1:1973083/1‑150 (MQ=255)
                                                                                                                                          acacTACCGAATCTCATACTTGGGATAACAATATCTCTGTAAAAGATTCCACAGTGACTTCGGGTTCAAATTATATCCTGGATAGCAATACTTATGGCAAAACTGGTCACTTTGGCAATTCTGATGAACCGAGTGATTATGCTGGCCCgg             >  2:5089099/1‑150 (MQ=255)
                                                                                                                                             cTACCGAATCTCATACTTGGGATAACAATATCTCTGTAAAAGATTCCACAGTGACTTAGGGTTCAAATTATATCCTGGATAGCAATACTTATGGCAAAACTGTTCACTTTGGCAATTCTGATGAACCGAGTGATTATGCTGGCCCGGGTg          <  1:10636/150‑1 (MQ=255)
                                                                                                                                              tACCGAATCTCATACTTGGGATAACAATATCTCTGTAAAAGATTCCACAGTGACTTCGGGTTCAAATTATATCCTGGATAGCAATACTTATGGCAAAACTGGTCACTTTGGCAATTCTGATGAACCGAGTGATTATGCTGGCCCGGGTGa         <  2:1227537/150‑1 (MQ=255)
                                                                                                                                                 cGAATCTCATACTTGGGATAACAATATCTCTGTAAAAGATTCCACAGTGACTTCGGGTTCAAATTATATCCTGGATAGCAATACTTATGGCAAAACTGGTCACTTTGGCAATTCTGATGAACCGAGTGATTATGCTGGCCCGGGTGATGt      >  1:1488389/1‑150 (MQ=255)
                                                                                                                                                  gAATCTCATACTTGGGATAACAATATCTCTGTAAAAGATTCCACAGTGACTTCGGGTTCAAATTATATCCTGGATAGCAATACTTATGGCAAAACTGGTCACTTTGGCAATTCTGATGAACCGAGTGATTATGCTGGCCCGGGTGATGtt     <  2:3839626/150‑1 (MQ=255)
                                                                                                                                                     tctcATACTTGGGATAACAATATCTCTGTAAAAGATTCCACAGTGACTTCGGGTTCAAATTATATCCTGGATAGCAATACTTATGGCAAAACTGGTCACTTTGGCAATTCTGATGAACCGAGTGATTATGCTGGCCCGGGTGATGTTGCa  <  1:4650331/150‑1 (MQ=255)
                                                                                                                                                     tctcATACTTGGGATAACAATATCTCTGTAAAAGATTCCACAGTGACTTCGGGTTCAAATTATATCCTGGATAGCAATACTTATGGCAAAACTGGTCACTTTGGCAATTCTGATGAACCGAGTGATTATGCTGGCCCGGGTGATGTTGCa  <  1:2061582/150‑1 (MQ=255)
                                                                                                                                                     |                                                                                                                                                     
CCAAGCACACAAATGAGACATTTGATACAAGTGAAGGCGTTGCTGTTAATCTTGATGTAGAAAGTAACATCAATATTTCCAATAACTCCCGCGTTGCAGGTATTGCATTATCTCAAGGTAATACTTACAACGAAACCTACACTACCGAATCTCATACTTGGGATAACAATATCTCTGTAAAAGATTCCACAGTGACTTCGGGTTCAAATTATATCCTGGATAGCAATACTTATGGCAAAACTGGTCACTTTGGCAATTCTGATGAACCGAGTGATTATGCTGGCCCGGGTGATGTTGCA  >  CP009273/386254‑386552

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.