| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | ACB122 | 3359608 = | 30 (0.560) | 50 (0.940) | 29/230 | NT | 77.2% | intergenic (+217/‑153) | pikAII_1/CJ019_03160 | Narbonolide/10‑deoxymethynolide synthase PikA2,modules 3 and 4/Tn3 family transposase ISPa42 |
| ? | ACB122 | 4982637 = | 0 (0.000) | coding (1090/1335 nt) | ycaD_3 | putative MFS‑type transporter YcaD | |||||
CGAGGCAAAAGCATCAGCATAGACGGCTAGCCAGACGGTGGATGACCAGCAAGCCACGGCCTCTCGAATAACCTTTTAAATCATATATTTACAGAACGAATGTCCTAATTTTTGCCTTATCTCGGCATAACCCCGG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < ACB122/3359743‑3359608‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ggCAAAGAATACGAAGAAGGCATACAGCATCTGCGCGCCCAGCACTTTCATCAGAACGCCTGCCGCCAGCGGGCCGACGCATGCACCCACACCGTAGGTCACCAACAGCATCGCCGTCAGCGATACCCGGCGCT > ACB122/4982637‑4982768 CGAGGCAAAAGCATCAGCATAGACGGCTAGCCAGACGGTGGATGACCAGCAAGCCACGGCCTCTCGAATAACCTTTTAAATCATATATTTACAGAACGAATGTCCTAATTTTTGCCTTATCTCGGCATAACCCCG < 2:297643/135‑1 GAGGCAAAAGCATCAGCATAGACGGCTAGCCAGACGGTGGATGACCAGCAAGCCACGGCCTCTCGAATAACCTTTTAAATCATATATTTACAGAACGAATGTCCTAATTTTTGCCTTATCTCGGCATAACCCCGG < 7:192178/135‑1 CAAAAGCATCAGCATAGACGGCTAGCCAGACGGTGGATGACCAGCAAGCCACGGCCTCTCGAATAACCTTTTAAATCATATATTTACAGAACGAATGTCCTAATTTTTGCCTTATCTCGGCATAACCCCGGC > 4:22233/1‑132 AAAGCATCAGCATAGACGGCTAGCCAGACGGTGGATGACCAGCAAGCCACGGCCTCTCGAATAACCTTTTAAATCATATATTTACAGAACGAATGTCCTAATTTTTGCCTTATCTCGGCATAACCCCGGCAAAGA > 3:92941/1‑135 AAAGCATCAGCATAGACGGCTAGCCAGACGGTGGATGACCAGCAAGCCACGGCCTCTCGAATAACCTTTTAAATCATATATTTACAGAACGAATGTCCTAATTTTTGCCTTATCTCGGCATAACCCCGGCAAAG > 6:68076/1‑134 ATCAGCATAGACGGCTAGCCAGACGGTGGATGACCAGCAAGCCACGGCCTCTCGAATAACCTTTTAAATCATATATTTACAGAACGAATGTCCTAATTTTTGCCTTATCTCGGCATAACCCCGGCAAAGAATACG < 1:160939/135‑1 ATCAGCATAGACGGCTAGCCAGACGGTGGATGACCAGCAAGCCACGGCCTCTCGAATAACCTTTTAAATCATATATTTACAGAACGAATGTCCTAATTTTTGCCTTATCTCGGCATAACCCCGGCAAAGAATACG < 5:26433/135‑1 AGACGGCTAGCCAGACGGTGGATGACCAGCAAGCCACGGCCTCTCGAATAACCTTTTAAATCATATATTTACAGAACGAATGTCCTAATTTTTGCCTTATCTCGGCATAACCCCGGCAAAGAATACGAAGAAGGC < 6:175205/135‑1 CCAGACGGTGGATGACCAGCAAGCCACGGCCTCTCGAATAACCTTTTAAATCATATATTTACAGACCGAATGTCCTAATTTTTGCCTTATCTCGGCATAACCCCGGCAAAGAATACGAAGAAGGCATACAGCATC > 6:159041/1‑135 CCAGACGGTGGATGACCAGCAAGCCACGGCCTCTCGAATAACCTTTTAAATCATATATTTACAGAACTAATGTCCTAATTTTTGCCTTTTCTCGGCATATCCCCGGCAAAGAATACGAAGAAGGCATACAGCATC > 4:337794/1‑135 CCAGACGGTGGATGACCAGCAAGCCACGGCCTCTCGAATAACCTTTTAAATCATATATTTACAGAACGAATGTCCTAATTTTTGCCTTATCTCGGCATAACCCCGGCAAAGAATACGAAGAAGGCATACAGCATC > 1:12405/1‑135 CCAGACGGTGGATGACCAGCAAGCCACGGCCTCTCGAATAACCTTTTAAATCATATATTTACAGAACGAATGTCCTAATTTTTGCCTTATCTCGGCATAACCCCGGCAAAGAATACGAAGAAGGCATACAGCATC > 5:202918/1‑135 CCAGACGGTGGATGACCAGCAAGCCACGGCCTCTCGAATAACCTTTTAAATCATATATTTACAGAACGAATGTCCTAATTTTTGCCTTATCTCGGCATAACCCCGGCAAAGAATACGAAGAAGGCATACAGCATC > 4:136776/1‑135 CCAGACGGTGGATGACCAGCAAGCCACGGCCTCTCGAATAACCTTTTAAATCATATATTTACAGAACGAATGTCCTAATTTTTGCCTTATCTCGGCATAACCCCGGCAAAGAATACGAAGAAGGCATACAGCATC > 2:117251/1‑135 CCAGACGGTGGATGACCAGCAAGCCACGGCCTCTCGAATAACCTTTTAAATCATATATTTACAGAACGAATGTCCTAATTTTTGCCTTATCTCGGCATAACCCCGGCAAAGAATACGAAGAAGGCATACAGCATC > 1:5447/1‑135 CGGTGGATGACCAGCAAGCCACGGCCTCTCGAATAACCTTTTAAATCATATATTTACAGAACGAATGTCCTAATTTTTGCCTTATCTCGGCATAACCCCGGCAAAGAATACGAAGAAGGCATACAGCATCTGCGC < 4:350768/135‑1 TGACCAGCAAGCCACGGCCTCTCGAATAACCTTTTAAATCATATATTTACAGAACGAATGTCCTAATTTTTGCCTTATCTCGGCATAACCCCGGCAAAGAATACGAAGAAGGCATACAGCATCTGCGCGCCCAGC < 6:216285/135‑1 CAGCAAGCCACGGCCTCTCGAATAACCTTTTAAATCATATATTTACAGAACGAATGTCCTAATTTTTGCCTTATCTCGGCATAACCCCGG < 2:175514/90‑1 CAGCAAGCCACGGCCTCTCGAATAACCTTTTAAATCATATATTTACAGAACGAATGTCCTAATTTTTGCCTTATCTCGGCATAACCCCGG > 1:175514/1‑90 AGCAAGCCACGGCCTCTCGAATAACCTTTTAAATCATATATTTACAGAACGAATGTCCTAATTTTTGCCTTATCTCGGCATAACCCCGGCAAAGAATACGAAGAAGGCATACAGCATCTGCGCGCCCAGCACTT > 3:261992/1‑134 AGCCACGGCCTCTCGAATAACCTTTTAAATCATATATTTACAGAACGAATGTCCTAATTTTTGCCTTATCTCGGCATAACCCCGGCAAAGAATACGAAGAAGGCATACAGCATCTGCGCGCCCAGCACTTTCATC > 3:188662/1‑135 AGCCACGGCCTCTCGAATAACCTTTTAAATCATATATTTACAGAACGAATGTCCTAATTTTTGCCTTATCTCGGCATAACCCCGGCAAAGAATACGAAGAAGGCATACAGCATCTGCGCGCCCAGCACTTTCA > 2:174907/1‑133 GAATAACCTTTTAAATCATATATTTACAGAACGAATGTCCTAATTTTTGCCTTATCTCGGCATAACCCCGGCAAAGAATACGAAGAAGGCATACAGCATCTGCGCGCCCAGCACTTTCATCAGAACGCCTGCCG > 6:354363/1‑134 AATCATATATTTACAGAACGAATGTCCTAATTTTTTCCTTATCTCGGCATAACCCCTTCAAAGAATACGAAGAAGGCATACAGCATCTGCGCGCCCAGCACTTTCATCAGAACGCCTGCCGCCAGCGGGCCGAC < 4:90739/134‑1 AATCATATATTTACAGAACGAATGTCCTAATTTTTGCCTTATCTCGGCATAACCCCGGCAAAGAATACGAAGAAGGCATACAGCATCTGCGCGCCCAGCACTTTCATCAGAACGCCTGCCGCCAGCGGGCCGAC < 3:33047/134‑1 AATCATATATTTACAGAACGAATGTCCTAATTTTTGCCTTATCTCGGCATAACCCCGGCAAAGAATACGAAGAAGGCATACAGCATCTGCGCGCCCAGCACTTTCATCAGAACGCCTGCCGCCAGCGGGCCGAC < 4:72478/134‑1 AATCATATATTTACAGAACGAATGTCCTAATTTTTGCCTTATCTCGGCATAACCCCGGCAAAGAATACGAAGAAGGCATACAGCATCTGCGCGCCCAGCACTTTCATCAGAACGCCTGCCGCCAGCGGGCCGAC > 6:83330/1‑134 AATCATATATTTACAGAACGAATGTCCTAATTTTTGCCTTATCTCGGCATAACCCCGGCAAAGAATACGAAGAAGGCATACAGCATCTGCGCGCCCAGCACTTTCATCAGAACGCCTGCCGCCAGCGGGCCGAC < 1:26199/134‑1 AATCATATATTTACAGAACGAATGTCCTAATTTTTGCCTTATCTCGGCATAACCCCGGCAAAGAATACGAAGAAGGCATACAGCATCTGCGCGCCCAGCACTTTCATCAGAACGCCTGCCGCCAGCGGGCCGAC > 6:125299/1‑134 AATCATATATTTACAGAACGAATGTCCTAATTTTTGCCTTATCTCGGCATAACCCCGGCAAAGAATACGAAGAAGGCATACAGCATCTGCGCGCCCAGCACTTTCATCAGAACGCCTGCCGCCAGCGGGCCGAC < 2:249954/134‑1 AATCATATATTTACAGAACGAATGTCCTAATTTTTGCCTTATCTCGGCATAACCCCGG < 1:19698/58‑1 AATCATATATTTACAGAACGAATGTCCTAATTTTTGCCTTATCTCGGCATAACCCCGG > 2:19698/1‑58 TCATATATTTACAGAACGAATGTCCTAATTTTTGCCTTATCTCGGCATAACCCCGGCAAAGAATACGAAGAAGGCATACAGCATCTGCGCGCCCAGCACTTTCATCAGAACGCCTGCCGCCAGCGGGCCGACGCA < 4:273493/135‑1 TATATTTACAGAACGAATGTCCTAATTTTTGCCTTATCTCGGCATAACCCCGGCAAAGAATACGAAGAAGGCATACAGCATCTGCGCGCCCAGCACTTTCATCAGAACGCCTGCCGCCAGCGGGCCGACGCATGC < 3:77361/135‑1 TATATTTACAGAACGAATGTCCTAATTTTTGCCTTATCTCGGCATAACCCCGGCAAAGAATACGAAGAAGGCATACAGCATCTGCGCGCCCAGCACTTTCATCAGAACGCCTGCCGCCAGCGGGCCGACGCATG < 3:22233/134‑1 ATATTTACAGAACGAATGTCCTAATTTTTGCCTTATCTCGGCATAACCCCGGCAAAGAATACCAAGAAGGCATACAGCATCTGCGCGCCCAGCCCTAACATCAGAACTCATGCCGCCAGCGGGCCGACGCATGCA > 5:82545/1‑135 TATTTACATAACGAATGTCCTAATTTTTGCCTTATCTCGGCATAACACCGGAAAAGAATACGAAGAAGGCATACAGCATCTGCGCGCCCAGCACTTTCATCAGAAAGCCTGCAGCCAGCGGGACGACGAATGCAC > 1:227218/1‑135 TATTTACAGAACGAATGTCCTAATTTTTGCCTTATCTCGGCATAACCCCGGCAAAGAATACGAAGAAGGCATACAGCATCTGCGCGCCCAGCACTTTCATCAGAACGCCTGCCGCCAGCGGGCCGACGCATGCAC > 4:44621/1‑135 TATTTACAGAACGAATGTCCTAATTTTTGCCTTATCTCGGCATAACCCCGGC < 4:267819/52‑1 TATTTACAGAACGAATGTCCTAATTTTTGCCTTATCTCGGCATAACCCCGGC > 3:267819/1‑52 ATTTACAGAACGAATGTCCTAATTTTTGCCTTATCTCGGCATAACCCCGGCAAAGAATACGAAGAAGGCATACAGCATCTGCGCGCCCAGCACTTTCATCAGACCGCCTGCCGCCAGCGGGCCGCCGCATGCACC > 6:115115/1‑135 ATTTACAGAACGAATGTCCTAATTTTTGCCTTATCTCGGCATAACCCCGGCAAAGAATACGAAGAAGGCATACAGCATCTGCGCGCCCAGCACTTTCATCAGAACGCCTGCCGCCAGCGGGCCGACGCATGCAC < 6:202918/134‑1 TTACAGAACGAATGTCCTAATTTTTGCCTTATCTCGGCATAACCCCGGCAAAGAATACGAAGAAGGCATACAGCATCTGCGCGCCCAGCACTTTCATCAGAACGCCTGCCGCCAGCGGGCCGACGCATGCACCCA < 1:174907/135‑1 AGAACGAATGTCCTAATTTTTGCCTTATCTCGGCATAACCCCGGCAAAGAATACGAAGAAGGCATACAGCATCTGCGCGCCCAGCACTTTCATCAGAACGCCTGCCGCCAGCGGGCCGACGCATGCACCCACAC < 4:188662/134‑1 GAATGTCCTAATTTTTGCCTTATCTCGGCATAACCCCGGCAAAGAATACGAAGAAGGCATACAGCATCTGCGCGCCCAGCACTTTCATCAGAACGCCTGCCGCCAGCGGGCCGACGCATGCACCCACACCGTAGG > 4:33833/1‑135 GAATGTCCTAATTTTTGCCTTATCTCGGCATAACCCCGGCAAAGAATACGAAGAAGGCATACAGCATCTGCGCGCCCAGCACTTTCATCAGAACGCCTGCCGCCAGCGGGCCGACGCATGCACCCACACCGTAGG > 2:67081/1‑135 GAATGTCCTAATTTTTGCCTTATCTCGGCATAACCCCGGCAAAGAATACGAAGAAGGCATACAGCATCAGCTCGCCCAGCACTTTCATCAGAACGCCTGCCGCCATCGGGCCGACGCATGCACCCACACCGTAG > 6:70113/1‑134 GAATGTCCTAATTTTTGCCTTATCTCGGCATAACCCCGGCAAAGAATACG < 2:153315/50‑1 GAATGTCCTAATTTTTGCCTTATCTCGGCATAACCCAGGCAAAGAATACG > 1:153315/1‑50 GTCCTAATTTTTGCCTTATCTCGGCATAACCCCGGCAAAGAATACGAAGAAGGCATACAGCATCTGCGCGCCCAGCACTTTCATCAGAACGCCTGCCGCCAGCGGGCCGACGCATGCACCCACACCGTAGGTCAC < 3:200914/135‑1 TGCCTTATCTCGGCATAACCCCGGCAAAGAATACGAAGAAGGCATACAGCATCTGCGCGCCCAGCACTTTCATCAGAACGCCTGCCGCCAGCGGGCCGACGCATGCACCCACACCGTAGGTCACCAACAGCATC < 4:92941/134‑1 CCTTATCTCGGCATAACCCCGGCAAAGAATACGACGAAGGCATACAGCATCTGCGCGCCCAGCACATTCATCAGAACGCCTGCCGCCAGCGGGCCGACGCATGCACCCACACCGTAGGTCACCAACAGCATCGC < 8:348226/134‑1 CCTTATCTCGGCATAACCCCGGCAAAGAATACGAAGAAGGCATACAGCATCTGCGCGCCCAGCACTTTCATCAGAACGCCTGCCGCCAGCGGGCCGACGCATGCACCCACACCGTAGGTCACCAACAGCATCGCC > 5:264844/1‑135 CCTTATCTCGGCATAACCCCGGCAAAGAATACGAAGAAGGCATACAGCATCTGCGCGCCCAGCACTTTCATCAGAACGCCTGCCGCCAGCGGGCCGACGCATGCACCCACACCGTAGGTCACCAACAGCATCGC < 1:117251/134‑1 CCTTATCTCGGCATAACCCCGCCAAAGAATACGAAGAAGGCATACAGCATCTGCGCGCCCAGCACTTTCATCAGAACGCCTGCCGCCAGCGGGCCGACGCATGCACCCACACCGTAGGTCACCAACAGCATCGC < 5:381405/134‑1 CTTATCTCGGCATAACCCCGGCAAAGCATACGAAGAAGGCATACAGCATCTGCGCGCCCAGCACTTTCATCAGAACGCCTGCCGCCAGCGGGCCGCCGCATGCACCCACACCGTAGGTCACCAACAGCATCGCCG > 5:200210/1‑135 CTTATCTCGGCATAACCCCGGCAAAGAATACGAAGAAGGCATACAGCATCTGCGCGCCCAGCACTTTCATCAGAACGCCTGCCGCCAGCGGGCCGACGCATGCACCCACACCGTAGGTCACCAACAGCATCGCCG > 5:213917/1‑135 CTCGGCATAACCCCGTCAAAGAATACGAAGAAGGCATACAGCATCTGCGCGCCCAGCACTTTCATCAGAACGCCTGCCGCCAGCGGGCCGACGCATGCACCCACACCGTAGGTCACCAACAGCATCGCCGTCAG < 7:159557/134‑1 CGGCATAACCCCGGCAAAGAATACGAAGAAGGCATACAGCATCTGCGCGCCCAGCACTTTCATCAGAACGCCTGCCGCCAGCGGGCCGACGCATGCACCCACACCGTAGGTCACCAACAGCATCGCCGTCAGCG > 7:302633/1‑134 TAACCCCGGCAAAGAATACGAAGAAGGCATACAGCATCTGCGCGCCCAGCACTTTCATCAGAACGCCTGCCGCCAGCGGGCCGACGCATGCACCCACACCGTAGGTCACCAACAGCATCGCCGTCAGCGATACCC > 6:171317/1‑135 CGGCAAAGAATACGAAGAAGGCATACAGCATCTGCGCGCCCAGCACTTTCATCAGAACGCCTGCCGCCAGCGGGCCGACGCATGCACCCACACCGTAGGTCACCAACAGCATCGCCGTCAGCGATACCCGGCGCT > 6:300839/1‑135 CGAGGCAAAAGCATCAGCATAGACGGCTAGCCAGACGGTGGATGACCAGCAAGCCACGGCCTCTCGAATAACCTTTTAAATCATATATTTACAGAACGAATGTCCTAATTTTTGCCTTATCTCGGCATAACCCCGG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < ACB122/3359743‑3359608‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ggCAAAGAATACGAAGAAGGCATACAGCATCTGCGCGCCCAGCACTTTCATCAGAACGCCTGCCGCCAGCGGGCCGACGCATGCACCCACACCGTAGGTCACCAACAGCATCGCCGTCAGCGATACCCGGCGCT > ACB122/4982637‑4982768 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |