| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | ACB122 | 3359608 = | 30 (0.560) | 50 (0.940) | 29/230 | NT | 77.2% | intergenic (+217/‑153) | pikAII_1/CJ019_03160 | Narbonolide/10‑deoxymethynolide synthase PikA2,modules 3 and 4/Tn3 family transposase ISPa42 |
| ? | ACB122 | 4982637 = | 0 (0.000) | coding (1090/1335 nt) | ycaD_3 | putative MFS‑type transporter YcaD | |||||
CACCCGCGGGTCCAGCGCCGCCGACAATGGCGAACCGGCCGCCGGCATCGCCACGTGGCCCAGCGGTGCATCCTGTACCTGATGCAGGCCGGTAACCGCTTTCGGCCGAATGCGCCAGACCAGCACCAGGGCAAAGAATACGAAGAAGGCATACAGCATCTGCGCGCCCAGCACTTTCATCAGAACGCCTGCCGCCAGCGGGCCGACGCATGCACCCACACCGTAGGTCACCAACAGCATCGCCGTCAGCGATACCCGGCGCT > ACB122/4982506‑4982768 | caaaagcatcagcatagacggctagccagacggtggatgaccagcaagccacggcctctcgaataaccttttaaatcatatatttacagaacgaatgtcctaatttttgccttatctcggcataaccccggc > 4:22233‑M2/132‑132 (MQ=255) aaagcatcagcatagacggctagccagacggtggatgaccagcaagccacggcctctcgaataaccttttaaatcatatatttacagaacgaatgtcctaatttttgccttatctcggcataaccccggCAAAg > 6:68076‑M2/130‑134 (MQ=255) aaagcatcagcatagacggctagccagacggtggatgaccagcaagccacggcctctcgaataaccttttaaatcatatatttacagaacgaatgtcctaatttttgccttatctcggcataaccccggCAAAGa > 3:92941‑M2/130‑135 (MQ=255) atcagcatagacggctagccagacggtggatgaccagcaagccacggcctctcgaataaccttttaaatcatatatttacagaacgaatgtcctaatttttgccttatctcggcataaccccggCAAAGAATACg < 5:26433‑M2/11‑1 (MQ=255) atcagcatagacggctagccagacggtggatgaccagcaagccacggcctctcgaataaccttttaaatcatatatttacagaacgaatgtcctaatttttgccttatctcggcataaccccggCAAAGAATACg < 1:160939‑M2/11‑1 (MQ=255) agacggctagccagacggtggatgaccagcaagccacggcctctcgaataaccttttaaatcatatatttacagaacgaatgtcctaatttttgccttatctcggcataaccccggCAAAGAATACGAAGAAGGc < 6:175205‑M2/19‑1 (MQ=255) ccagacggtggatgaccagcaagccacggcctctcgaataaccttttaaatcatatatttacagaccgaatgtcctaatttttgccttatctcggcataaccccggCAAAGAATACGAAGAAGGCATACAGCATc > 6:159041‑M2/107‑135 (MQ=255) ccagacggtggatgaccagcaagccacggcctctcgaataaccttttaaatcatatatttacagaactaatgtcctaatttttgccttttctcggcatatccccggCAAAGAATACGAAGAAGGCATACAGCATc > 4:337794‑M2/107‑135 (MQ=255) ccagacggtggatgaccagcaagccacggcctctcgaataaccttttaaatcatatatttacagaacgaatgtcctaatttttgccttatctcggcataaccccggCAAAGAATACGAAGAAGGCATACAGCATc > 1:12405‑M2/107‑135 (MQ=255) ccagacggtggatgaccagcaagccacggcctctcgaataaccttttaaatcatatatttacagaacgaatgtcctaatttttgccttatctcggcataaccccggCAAAGAATACGAAGAAGGCATACAGCATc > 5:202918‑M2/107‑135 (MQ=255) ccagacggtggatgaccagcaagccacggcctctcgaataaccttttaaatcatatatttacagaacgaatgtcctaatttttgccttatctcggcataaccccggCAAAGAATACGAAGAAGGCATACAGCATc > 4:136776‑M2/107‑135 (MQ=255) ccagacggtggatgaccagcaagccacggcctctcgaataaccttttaaatcatatatttacagaacgaatgtcctaatttttgccttatctcggcataaccccggCAAAGAATACGAAGAAGGCATACAGCATc > 2:117251‑M2/107‑135 (MQ=255) ccagacggtggatgaccagcaagccacggcctctcgaataaccttttaaatcatatatttacagaacgaatgtcctaatttttgccttatctcggcataaccccggCAAAGAATACGAAGAAGGCATACAGCATc > 1:5447‑M2/107‑135 (MQ=255) cggtggatgaccagcaagccacggcctctcgaataaccttttaaatcatatatttacagaacgaatgtcctaatttttgccttatctcggcataaccccggCAAAGAATACGAAGAAGGCATACAGCATCTgcgc < 4:350768‑M2/34‑1 (MQ=255) tgaccagcaagccacggcctctcgaataaccttttaaatcatatatttacagaacgaatgtcctaatttttgccttatctcggcataaccccggCAAAGAATACGAAGAAGGCATACAGCATCTGCGCGCCCAGc < 6:216285‑M2/41‑1 (MQ=255) agcaagccacggcctctcgaataaccttttaaatcatatatttacagaacgaatgtcctaatttttgccttatctcggcataaccccggCAAAGAATACGAAGAAGGCATACAGCATCTGCGCGCCCAGCACtt > 3:261992‑M2/90‑134 (MQ=255) agccacggcctctcgaataaccttttaaatcatatatttacagaacgaatgtcctaatttttgccttatctcggcataaccccggCAAAGAATACGAAGAAGGCATACAGCATCTGCGCGCCCAGCACTTtcatc > 3:188662‑M2/86‑135 (MQ=255) agccacggcctctcgaataaccttttaaatcatatatttacagaacgaatgtcctaatttttgccttatctcggcataaccccggCAAAGAATACGAAGAAGGCATACAGCATCTGCGCGCCCAGCACTTtca > 2:174907‑M2/86‑133 (MQ=255) gaataaccttttaaatcatatatttacagaacgaatgtcctaatttttgccttatctcggcataaccccggCAAAGAATACGAAGAAGGCATACAGCATCTGCGCGCCCAGCACTTTCATCAGAACGCCTgccg > 6:354363‑M2/72‑134 (MQ=255) aatcatatatttacagaacgaatgtcctaattttttccttatctcggcataaccccttCAAAGAATACGAAGAAGGCATACAGCATCTGCGCGCCCAGCACTTTCATCAGAACGCCTGCCGCCAGCGGGCCGAc < 4:90739‑M2/76‑1 (MQ=255) aatcatatatttacagaacgaatgtcctaatttttgccttatctcggcataaccccggCAAAGAATACGAAGAAGGCATACAGCATCTGCGCGCCCAGCACTTTCATCAGAACGCCTGCCGCCAGCGGGCCGAc > 6:125299‑M2/59‑134 (MQ=255) aatcatatatttacagaacgaatgtcctaatttttgccttatctcggcataaccccggCAAAGAATACGAAGAAGGCATACAGCATCTGCGCGCCCAGCACTTTCATCAGAACGCCTGCCGCCAGCGGGCCGAc > 6:83330‑M2/59‑134 (MQ=255) aatcatatatttacagaacgaatgtcctaatttttgccttatctcggcataaccccggCAAAGAATACGAAGAAGGCATACAGCATCTGCGCGCCCAGCACTTTCATCAGAACGCCTGCCGCCAGCGGGCCGAc < 3:33047‑M2/76‑1 (MQ=255) aatcatatatttacagaacgaatgtcctaatttttgccttatctcggcataaccccggCAAAGAATACGAAGAAGGCATACAGCATCTGCGCGCCCAGCACTTTCATCAGAACGCCTGCCGCCAGCGGGCCGAc < 4:72478‑M2/76‑1 (MQ=255) aatcatatatttacagaacgaatgtcctaatttttgccttatctcggcataaccccggCAAAGAATACGAAGAAGGCATACAGCATCTGCGCGCCCAGCACTTTCATCAGAACGCCTGCCGCCAGCGGGCCGAc < 2:249954‑M2/76‑1 (MQ=255) aatcatatatttacagaacgaatgtcctaatttttgccttatctcggcataaccccggCAAAGAATACGAAGAAGGCATACAGCATCTGCGCGCCCAGCACTTTCATCAGAACGCCTGCCGCCAGCGGGCCGAc < 1:26199‑M2/76‑1 (MQ=255) tcatatatttacagaacgaatgtcctaatttttgccttatctcggcataaccccggCAAAGAATACGAAGAAGGCATACAGCATCTGCGCGCCCAGCACTTTCATCAGAACGCCTGCCGCCAGCGGGCCGACGCa < 4:273493‑M2/79‑1 (MQ=255) tatatttacagaacgaatgtcctaatttttgccttatctcggcataaccccggCAAAGAATACGAAGAAGGCATACAGCATCTGCGCGCCCAGCACTTTCATCAGAACGCCTGCCGCCAGCGGGCCGACGCATg < 3:22233‑M2/81‑1 (MQ=255) tatatttacagaacgaatgtcctaatttttgccttatctcggcataaccccggCAAAGAATACGAAGAAGGCATACAGCATCTGCGCGCCCAGCACTTTCATCAGAACGCCTGCCGCCAGCGGGCCGACGCATGc < 3:77361‑M2/82‑1 (MQ=255) atatttacagaacgaatgtcctaatttttgccttatctcggcataaccccggCAAAGAATACCAAGAAGGCATACAGCATCTGCGCGCCCAGCCCTAACATCAGAACTCATGCCGCCAGCGGGCCGACGCATGCa > 5:82545‑M2/53‑135 (MQ=255) tatttacataacgaatgtcctaatttttgccttatctcggcataacaccggAAAAGAATACGAAGAAGGCATACAGCATCTGCGCGCCCAGCACTTTCATCAGAAAGCCTGCAGCCAGCGGGACGACGAATGCAc > 1:227218‑M2/52‑135 (MQ=255) tatttacagaacgaatgtcctaatttttgccttatctcggcataaccccggc < 4:267819‑M2/1‑1 (MQ=255) tatttacagaacgaatgtcctaatttttgccttatctcggcataaccccggc > 3:267819‑M2/52‑52 (MQ=255) tatttacagaacgaatgtcctaatttttgccttatctcggcataaccccggCAAAGAATACGAAGAAGGCATACAGCATCTGCGCGCCCAGCACTTTCATCAGAACGCCTGCCGCCAGCGGGCCGACGCATGCAc > 4:44621‑M2/52‑135 (MQ=255) atttacagaacgaatgtcctaatttttgccttatctcggcataaccccggCAAAGAATACGAAGAAGGCATACAGCATCTGCGCGCCCAGCACTTTCATCAGACCGCCTGCCGCCAGCGGGCCGCCGCATGCAcc > 6:115115‑M2/51‑135 (MQ=255) atttacagaacgaatgtcctaatttttgccttatctcggcataaccccggCAAAGAATACGAAGAAGGCATACAGCATCTGCGCGCCCAGCACTTTCATCAGAACGCCTGCCGCCAGCGGGCCGACGCATGCAc < 6:202918‑M2/84‑1 (MQ=255) ttacagaacgaatgtcctaatttttgccttatctcggcataaccccggCAAAGAATACGAAGAAGGCATACAGCATCTGCGCGCCCAGCACTTTCATCAGAACGCCTGCCGCCAGCGGGCCGACGCATGCACCca < 1:174907‑M2/87‑1 (MQ=255) agaacgaatgtcctaatttttgccttatctcggcataaccccggCAAAGAATACGAAGAAGGCATACAGCATCTGCGCGCCCAGCACTTTCATCAGAACGCCTGCCGCCAGCGGGCCGACGCATGCACCCacac < 4:188662‑M2/90‑1 (MQ=255) gaatgtcctaatttttgccttatctcggcataaccccggCAAAGAATACg < 2:153315‑M2/11‑1 (MQ=255) gaatgtcctaatttttgccttatctcggcataaccccggCAAAGAATACGAAGAAGGCATACAGCATCTGCGCGCCCAGCACTTTCATCAGAACGCCTGCCGCCAGCGGGCCGACGCATGCACCCACACCGTAgg > 4:33833‑M2/40‑135 (MQ=255) gaatgtcctaatttttgccttatctcggcataaccccggCAAAGAATACGAAGAAGGCATACAGCATCTGCGCGCCCAGCACTTTCATCAGAACGCCTGCCGCCAGCGGGCCGACGCATGCACCCACACCGTAgg > 2:67081‑M2/40‑135 (MQ=255) gaatgtcctaatttttgccttatctcggcataaccccggCAAAGAATACGAAGAAGGCATACAGCATCAGCTCGCCCAGCACTTTCATCAGAACGCCTGCCGCCATCGGGCCGACGCATGCACCCACACCGTAg > 6:70113‑M2/40‑134 (MQ=255) gaatgtcctaatttttgccttatctcggcataacccaggCAAAGAATACg > 1:153315‑M2/40‑50 (MQ=255) gtcctaatttttgccttatctcggcataaccccggCAAAGAATACGAAGAAGGCATACAGCATCTGCGCGCCCAGCACTTTCATCAGAACGCCTGCCGCCAGCGGGCCGACGCATGCACCCACACCGTAGGTCAc < 3:200914‑M2/100‑1 (MQ=255) tgccttatctcggcataaccccggCAAAGAATACGAAGAAGGCATACAGCATCTGCGCGCCCAGCACTTTCATCAGAACGCCTGCCGCCAGCGGGCCGACGCATGCACCCACACCGTAGGTCACCAACAGCATc < 4:92941‑M2/110‑1 (MQ=255) ccttatctcggcataaccccggCAAAGAATACGACGAAGGCATACAGCATCTGCGCGCCCAGCACATTCATCAGAACGCCTGCCGCCAGCGGGCCGACGCATGCACCCACACCGTAGGTCACCAACAGCATCGc < 8:348226‑M2/112‑1 (MQ=255) ccttatctcggcataaccccggCAAAGAATACGAAGAAGGCATACAGCATCTGCGCGCCCAGCACTTTCATCAGAACGCCTGCCGCCAGCGGGCCGACGCATGCACCCACACCGTAGGTCACCAACAGCATCGcc > 5:264844‑M2/23‑135 (MQ=255) ccttatctcggcataaccccggCAAAGAATACGAAGAAGGCATACAGCATCTGCGCGCCCAGCACTTTCATCAGAACGCCTGCCGCCAGCGGGCCGACGCATGCACCCACACCGTAGGTCACCAACAGCATCGc < 1:117251‑M2/112‑1 (MQ=255) ccttatctcggcataaccccgcCAAAGAATACGAAGAAGGCATACAGCATCTGCGCGCCCAGCACTTTCATCAGAACGCCTGCCGCCAGCGGGCCGACGCATGCACCCACACCGTAGGTCACCAACAGCATCGc < 5:381405‑M2/112‑1 (MQ=255) cttatctcggcataaccccggCAAAGCATACGAAGAAGGCATACAGCATCTGCGCGCCCAGCACTTTCATCAGAACGCCTGCCGCCAGCGGGCCGCCGCATGCACCCACACCGTAGGTCACCAACAGCATCGCCg > 5:200210‑M2/22‑135 (MQ=255) cttatctcggcataaccccggCAAAGAATACGAAGAAGGCATACAGCATCTGCGCGCCCAGCACTTTCATCAGAACGCCTGCCGCCAGCGGGCCGACGCATGCACCCACACCGTAGGTCACCAACAGCATCGCCg > 5:213917‑M2/22‑135 (MQ=255) ctcggcataaccccgtCAAAGAATACGAAGAAGGCATACAGCATCTGCGCGCCCAGCACTTTCATCAGAACGCCTGCCGCCAGCGGGCCGACGCATGCACCCACACCGTAGGTCACCAACAGCATCGCCGTCAg < 7:159557‑M2/118‑1 (MQ=255) cggcataaccccggCAAAGAATACGAAGAAGGCATACAGCATCTGCGCGCCCAGCACTTTCATCAGAACGCCTGCCGCCAGCGGGCCGACGCATGCACCCACACCGTAGGTCACCAACAGCATCGCCGTCAGCg > 7:302633‑M2/15‑134 (MQ=255) taaccccggCAAAGAATACGAAGAAGGCATACAGCATCTGCGCGCCCAGCACTTTCATCAGAACGCCTGCCGCCAGCGGGCCGACGCATGCACCCACACCGTAGGTCACCAACAGCATCGCCGTCAGCGATAccc > 6:171317‑M2/10‑135 (MQ=255) cggCAAAGAATACGAAGAAGGCATACAGCATCTGCGCGCCCAGCACTTTCATCAGAACGCCTGCCGCCAGCGGGCCGACGCATGCACCCACACCGTAGGTCACCAACAGCATCGCCGTCAGCGATACCCGGCGCt > 6:300839‑M2/4‑135 (MQ=255) | CACCCGCGGGTCCAGCGCCGCCGACAATGGCGAACCGGCCGCCGGCATCGCCACGTGGCCCAGCGGTGCATCCTGTACCTGATGCAGGCCGGTAACCGCTTTCGGCCGAATGCGCCAGACCAGCACCAGGGCAAAGAATACGAAGAAGGCATACAGCATCTGCGCGCCCAGCACTTTCATCAGAACGCCTGCCGCCAGCGGGCCGACGCATGCACCCACACCGTAGGTCACCAACAGCATCGCCGTCAGCGATACCCGGCGCT > ACB122/4982506‑4982768 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |