| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | ACB122 | 3359608 = | 32 (0.590) | 49 (0.920) | 29/256 | 0.5 | 73.4% | intergenic (+217/‑153) | pikAII_1/CJ019_03160 | Narbonolide/10‑deoxymethynolide synthase PikA2,modules 3 and 4/Tn3 family transposase ISPa42 |
| ? | ACB122 | 4982637 = | 4 (0.070) | coding (1090/1335 nt) | ycaD_3 | putative MFS‑type transporter YcaD | |||||
AGCGAGGCAAAAGCATCAGCATAGACGGCTAGCCAGACGGTGGATGACCAGCAAGCCACGGCCTCTCGAATAACCTTTTAAATCATATATTTACAGAACGAATGTCCTAATTTTTGCCTTATCTCGGCATAACCCCGG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < ACB122/3359745‑3359608‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ggCAAAGAATACGAAGAAGGCATACAGCATCTGCGCGCCCAGCACTTTCATCAGAACGCCTGCCGCCAGCGGGCCGACGCATGCACCCACACCGTAGGTCACCAACAGCATCGCCGTCAGCGATACCCGGCGCTC > ACB122/4982637‑4982769 AGCGAGGCAAAAGCATCAGCATAGACGGCTAGCCAGACGGTGGATGACCAGCAAGCCACGGCCTCTCGAATAACCTTTTAAATCATATATTTACAGAACGAATGTCCTAATTTTTGCCTTATCTCGGCATAACCCCG > 5:116341/1‑137AGCGAGGCAAAAGCATCAGCATAGACGGCTAGCCAGACGGTGGATGACCAGCAAGCCACGGCCTCTCGAATAACCTTTTAAATCATATATTTACAGAACGAATGTCCTAATTTTTGCCTTATCTCGGCATAACCCCG > 4:321468/1‑137AGCGAGGCAAAAGCATCAGCATAGACGGCTAGCCAGACGGTGGATGACCAGCAAGCCACGGCCTCTCGAATAACCTTTTAAATCATATATTTACAGAACGAATGTCCTAATTTTTGCCTTATCTCGGCATAACCCCG > 4:62890/1‑137 GCGAGGCAAAAGCATCAGCATAGACGGCTAGCCAGACGGTGGATGACCAGCAAGGCACGGCCTCTCGAATAACCTTTTAAATCATATATTTACAGAACGAATGTCCTAATTTTTGCCTTATCTCGGCATAACCCCGG < 7:214511/137‑1 GGCAAAAGCATCAGCATAGACGGCTAGCCAGACGGTGGATGACCAGCAAGCCACGGCCTCTCGAATAACCTTTTAAATCATATATTTACAGAACGAATGTCCTAATTTTTGCCTTATCTCGGCATAACCCCGGCAAA > 5:258881/1‑137 GGCAAAAGCATCAGCATAGACGGCTAGCCAGACGGTGGATGACCAGCAAGCCACGGCCTCTCGAATAACCTTTTAAATCATATATTTACAGAACGAATGTCCTAATTTTTGCCTTATCTCGGCATAACCCCGGCAAA > 2:209271/1‑137 CAAAAGCATCAGCATAGACGGCTAGCCAGACGGTGGATGACCAGCAAGCCACGGCCTCTCGAATAACCTTTTAAATCATATATTTACAGAACGAATGTCCTAATTTTTGCCTTATCTCGGCATAACCCCGGCAAAGA > 1:113940/1‑137 AAAGCATCAGCATAGACGGCTAGCCAGACGGTGGATGACCAGCAAGCCACGGCCTCTCGAATAACCTTTTAAATCATATATTTACAGAACGACTGTCCTAATTTTTGCATTATCTCGGCATAACCACGGCAAAGAAT > 8:251108/1‑137 AAAGCATCAGCATAGACGGCTAGCCAGACGGTGGATGACCAGCAAGCCACGGCCTCTCGAATAACCTTTTAAATCATATATTTACAGAACGAATGTCCTAATTTTTGCCTTATCTCGGCATAACCCCGGCAAAGAAT > 6:147307/1‑137 GCATCAGCATAGACGGCTAGCCAGACGGTGTATGACCAGCAAGCCACGGCCTCTCGAATAACCTTTTAAATCATATATTTACAGAACGAATGTCCTAATTTTTGCCTTATCTCGGCATAACCCCGGCAAAGAATACG < 1:67497/137‑1 GCATCAGCATAGACGGCTAGCCAGACGGTGGATGACCAGCAAGCCACGGCCTCTCGAATAACCTTTTAAATCATATATTTACAGAACGAATGTCCTAATTTTTGCCTTATCTCGGCATAACCCCGGCAAAGAATACG < 3:57160/137‑1 GCATCAGCATAGACGGCTAGCCAGACGGTGGATGACCAGCAAGCCACGGCCTCTCGAATAACCTTTTAAATCATATATTTACAGAACGAATGTCCTAATTTTTGCCTTATCTCGGCATAACCCCGGCAAAGAATACG < 5:318659/137‑1 GCATCAGCATAGACGGCTAGCCAGACGGTGGATGACCAGCAAGCCACGGCCTCTCGAATAACCTTTTAAATCATATATTTACAGAACGAATGTCCTAATTTTTGCCTTATCTCGGCATAACCCCGGCAAAGAATACG < 1:283682/137‑1 GCATCAGCATAGACGGCTAGCCAGACGGTGGATGACCAGCAAGCCACGGCCTCTCGAATAACCTTTTAAATCATATATTTACAGAACGAATGTCCTAATTTTTGCCTTATCTCGGCATAACCCCGGCAAAGAATACG < 2:301213/137‑1 GCATCAGCATAGACGGCTAGCCAGACGGTGGATGACCAGCAAGCCACGGCCTCTCGAATAACCTTTTAAATCATATATTTACAGAACGAATGTCCTAATTTTTGCCTTATCTCGGCATAACCCCGGCAAAGAATACG < 3:121450/137‑1 CATCAGCATAGACGGCTAGCCAGACGGTGGATGACCAGCAAGCCACGGCCTCTCGAATAACCTTTTAAATCATATATTTACAGAACGAATGTCCTAATTTTTGCCTTATCTCGGCATAACCCCGGCAAAGAATACGA > 2:96876/1‑137 CATCAGCATAGACGGCTAGCCAGACGGTGGATGACCAGCAAGCCACGGCCTCTCGAATAACCTTTTAAATCATATATTTACAGAACGAATGTCCTAATTTTTGCCTTATCTCGGCATAACCCCGGCAAAGAATACGA < 4:163164/137‑1 CAGCATAGACGGCTAGCCAGACGGTGGATGACCAGCAAGCCACGGCCTCTCGAATAACCTTTTAAATCATATATTTACAGAACGAATGTCCTAATTTTTGCCTTATCTCGGCATAACCCCGGCAAAGAATACGAAGA < 6:204399/137‑1 ATAGACGGCTAGCCAGACGGTGGATGACCAGCAAGCCACGGCCTCTCGAATAACCTTTTAAATCATATATTTACAGAACGAATGTCCTAATTTTTGCCTTATCTCGGCATAACCCCGGCAAAGAATACGAAGAAGGC < 5:173677/137‑1 ATAGACGGCTAGCCAGACGGTGGATGACCAGCAAGCCACGGCCTCTCGAATAACCTTTTAAATCATATATTTACAGAACGAATGTCCTAATTTTTGCCTTATCTCGGCATAACCCCGGCAAAGAATACGAAGAAGGC < 3:15709/137‑1 TAGACGGCTAGCCAGACGGTGGATGACCAGCAAGCCACGGCCTCTCGAATAACCTTTTAAATCATATATTTACAGAACGAATGTCCTAATTTTTGCCTTATCTCGGCATAACCCCGGCAAAGAATACGAAGAAGGCA > 6:219601/1‑137 AGCCAGACGGTGGATGACCAGCAAGCCACGGCCTCTCGAATAACCTTTTAAATCATATATTTACAGAACGAATGTCCTAATTTTTGCCTTATCTCGGCATAACCCCGGCAAAGAATACGAAGAAGGCATACAGCATC < 1:209271/137‑1 AGCCAGACCGTGGCTGACCAGCAAGCCACGGCCTCTCGAATAACCTTTTAAATCATATATTTACAGAACGAATGTCCTAATTTTTGCCTTATCTCGTCATAACCCCGGCAAAGAATACGAAGAAGGCATACTGCATC < 2:280748/137‑1 CCAGACGGTGGATGACCAGCAAGCCACGGCCTCTCGAATAACCTTTTAAATCATATATTTACAGAACGAATGTCCTAATTTTTGCCTTATCTCGGCATAACCCCGGCAAAGAATACGAAGAAGGCATACAGCATCTG > 4:169165/1‑137 CCAGACGGTGGATGACCAGCAAGCCACGGCCTCTCGAATAACCTTTTAAATCATATATTTACAGAACGAATGTCCTAATTTTTGCCTTATCTCGGCATAACCCCGGCAAAGAATACGAAGAAGGCATACAGCATCTG > 4:82097/1‑137 CCAGACGGTGGATGACCAGCAAGCCACGGCCTCTCGAATAACCTTTTAAATCATATATTTACAGAACGAATGTCCTAATTTTTGCCTTATCTCGGCATAACCCCGGCAAAGAATACGAAGAAGGCATACAGCATCTG > 2:233189/1‑137 CCAGACGGTGGATGACCAGCAAGCCACGGCCTCTCGAATAACCTTTTAAATCATATATTTACAGAACGAATGTCCTAATTTTTGCCTTATCTCGGCATAACCCCGGCAAAGAATACGAAGAAGGCATACAGCATCTG > 1:310748/1‑137 CGGTGGATGACCAGCAAGCCACGGCCTCTCGAATAACCTTTTAAATCATATATTTACAGAACGAATGTCCTAATTTTTGCCTTATCTCGGCATAACCCCGGCAAAGAATACGAAGAAGGCATACAGCATCTGCGCGC > 1:165330/1‑137 CGGTGGATGACCAGCAAGCCACGGCCTCTCGAATAACCTTTTAAATCATATATTTACAGAACGAATGTCCTAATTTTTGCCTTATCTCGGCATAACCCCGGCAAAGAATACGAAGAAGGCATACAGCATCTGCGCGC < 1:163296/137‑1 GTGGATGACCAGCAAGCCACGGCCTCTCGAATAACCTTTTAAATCATATATTTACAGAACGAATGTCCTAATTTTTGCCTTATCTCGGCATAACCCCGGCAAAGAATACGAAGAAGGCATACAGCATCTGCGCGCCC > 8:312325/1‑137 GACCAGCAAGCCACGGCCTCTCGAATAACCTTTTAAATCATATATTTACAGAACGAATGTCCTAATTTTTGCCTTATCTCGGCATAACCCCGGCAAAGAATACGAAGAAGGCATACAGCATCTGCGCGC > 8:289116/1‑129 GACCAGCAAGCCACGGCCTCTCGAATAACCTTTTAAATCATATATTTACAGAACGAATGTCCTAATTTTTGCCTTATCTCGGCATAACCCCGGCAAAGAATACGAAGAAGGCATACAGCATCTGCGCGC < 7:289116/129‑1 AGCAAGCCACGGCCTCTCGAATAACCTTTTAAATCATATATTTACAGAACGAATGTCCTAATTTTTGCCTTATCTCGGCATAACCCCGGCAAAGAATACGAAGAAGGCATACAGCATCTGCGCGCCCAGCACTTTCA > 1:287744/1‑137 AGCCACGGCCTCTCGAATAACCTTTTAAATCATATATTTACAGAACGAATGTCCTAATTTTTGCCTTATCTCGGCATAACCCCGGCAAAGAATACGAAGAAGGCATACAGCATCTGCGCGCCCAGCACTTTCATCAt > 1:310230/1‑136 GAATAACCTTTTAAATCATATATTTACAGAACGAATGTCCTAATTTTTGCCTTATCTCGGCATAACCCCGGCAAAGAATACGAAGAAGGCATACAGCATCTGCGCGCCCAGCACTTTCATCAGAACGCCTGCCGCCA > 3:276093/1‑137 GAATAACCTTTTAAATCATATATTTACAGAACGAATGTCCTAATTTTTGCCTTATCTCGGCATAACCCCGGCAAAGAATACGAAGAAGGCATACAGCATCTGCGCGCCCAGCACTTTCATCAGAACGCCTGCCGCCA > 7:90194/1‑137 GAATAACCTTTTAAATCATATATTTACAGAACGAATGTCCTAATTTTTGCCTTATCTCGGCATAACCCCGGCAAAGAATACGAAGAAGGCATACAGCATCTGCGCGCACAGCACTTTCATCAGAACGCCTGCCGCCA > 7:294182/1‑137 ATAACCTTTTAAATCATATATTTACAGAACGAATGTCCTAATTTTTGCCTTATCTCGGCATAACCCCGGCAAAGAATACGAAGAAGGCATACAGCATCTGCGCGCCCAGCACTTTCATCAGAACGCCTGCCGCCAGC < 2:165330/137‑1 TTTAAATCATATATTTACAGAACGAATGTCCTAATTTTTGCCTTATCTCGGCATAACCCCGGCAAAGAATACG > 4:146826/1‑73 TTTAAATCATATATTTACAGAACGAATGTCCTAATTTTTGCCTTATCTCGGCATAACCCCGGCAAAGAATACG < 3:146826/73‑1 TTAAATCATATATTTACAGAACGAATGTCCTAATTTTTGCCTTATCTCGGCATAACCCCGGCAAAGAATACGAAGAAGGCATACAGCATCTGCGCGCCCAGCACTTTCATCAGAACGCCTGCCGCCAGCGGGCCGAC < 5:219601/137‑1 TTAAATCATATATTTACAGAACGAATGTCCTAATTTTTGCCTTATCTCGGCATAACCCCGGCAAAGAATACGAAGAAGGCATACAGCATCTGCGCGCCCAGCACTTTCATCAGAACGCCTGCCGCCAGCGGGCCGAC < 6:258881/137‑1 aATATATTTACAGAACGAATGTCCTAATTTTTGCCTTATCTCGGCATAACCCCGGCAAAGAATACGAAGAAGGCATACAGCATCTGCGCGCCCAGCACTTTCATCAGAACGCCTGCCGCCAGCGGGCCGACGCATGC < 5:171348/136‑1 CATATATTTACAGAACGAATGTCCTAATTTTTGCCTTATCTCGGCATAACCCCGGCAAAGAATACGAAGAAGGCATACAGCATCTGCGCGCCCAGCACTTTCATCAGAACGCCTGCCGCCAGCGGGCCGACGCATGC < 2:94809/137‑1 TATATTTACAGTACGAATGTCCTAATTTTTGCGTTATCTCGGCATTACCCCGGCAAAGAATACGAAGAAGGCATACAGCATCTGCGCGCCCAGCACTTTCATCAGAACGCCTGCCGCCAGCGGGCCGACGCATGCAC < 1:237043/137‑1 TATATTTACAGAACGAATGTCCTAATTTTTGCCTTATCTCGGCATAACCCCGGCAAAGAATACGAAGAAGGCATACAGCATCTGCGCGCCCAGCACTTTCATCAGAACGCCTGCCGCCAGCGGGCCGACGCATGCAC < 1:54949/137‑1 GAACGAATGTCCTAATTTTTGCCTTATCTCGGCATAACCCCGGCAAAGAATACGAAGAAGGCATACAGCATCTGCGCGCCCAGCACTTTCATCAGAACGCCTGCCGCCAGCGGGCCGACGCATGCACCCACACCGTA < 7:88495/137‑1 GAATGTCCTAATTTTTGCCTTATCTCGGCATAACCCCGGCAAAGAATACGAAGAAGGCATACAGCATCTGCGCGCCCAGCACTTAAATCAGAACGCCTGCCGCCAGCGGGCCGACGCATGCACCCACACCGTAGGTa > 1:170839/1‑136 ATGTCCTAATTTTTGCCTTATCTCGGCATAACCCCGGCAAAGAATACGAAGAAGGCATACAGCATCTGCGCGCCCAGCACTTTCATCAGAACGCCTGCCGCCAGCGGGCCGACGCATGCACCCACACCGTAGGTCAC > 2:78311/1‑137 TTGCCTTATCTCGGCATAACCCCGGCAAAGAATACGAAGAAGGCATACAGCATCTGCGCGCCCAGCACTTTCATCAGAACGCCTGCCGCCAGCGGGCCGACGCATGCACCCACACCGTAGGTCACCAACAGCATCGC < 5:208917/137‑1 TTGCCTTATCTCGGCATAACCCCGGCAAAGAATACGAAGAAGGCATACAGCATCTGCGCGCCCAGCACTTTCATCAGAACGCCTGCCGCCAGCGGGCCGACGCATGCACCCACACCGTAGGTCACCAACAGCATCGC < 1:153254/137‑1 CCCCGGCAAAGAATACGAAGAAGGCATACAGCATCTGCGCGCCCAGCACTTTCATCAGAACGCCTGCCGCCAGCGGGCCGACGCATGCACCCACACCGTAGGTCACCAACAGCATCGCCGTCAGCGATACCCGGCGC < 7:312325/137‑1 CCGGCAAAGAATACGAAGAAGGCATACAGCATCTGCGCGCCCAGCACTTTCATCAGAACGCCTGCCGCCAGCGGGCCGACGCATGCACCCACACCGTAGGTCACCAACAGCATCGCCGTCAGCGATACCCGGCGCTC < 3:185221/137‑1 AGCGAGGCAAAAGCATCAGCATAGACGGCTAGCCAGACGGTGGATGACCAGCAAGCCACGGCCTCTCGAATAACCTTTTAAATCATATATTTACAGAACGAATGTCCTAATTTTTGCCTTATCTCGGCATAACCCCGG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < ACB122/3359745‑3359608‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ggCAAAGAATACGAAGAAGGCATACAGCATCTGCGCGCCCAGCACTTTCATCAGAACGCCTGCCGCCAGCGGGCCGACGCATGCACCCACACCGTAGGTCACCAACAGCATCGCCGTCAGCGATACCCGGCGCTC > ACB122/4982637‑4982769 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |