| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | ACB122 | 3359608 = | 32 (0.590) | 49 (0.920) | 29/256 | 0.5 | 73.4% | intergenic (+217/‑153) | pikAII_1/CJ019_03160 | Narbonolide/10‑deoxymethynolide synthase PikA2,modules 3 and 4/Tn3 family transposase ISPa42 |
| ? | ACB122 | 4982637 = | 4 (0.070) | coding (1090/1335 nt) | ycaD_3 | putative MFS‑type transporter YcaD | |||||
TCCACCCGCGGGTCCAGCGCCGCCGACAATGGCGAACCGGCCGCCGGCATCGCCACGTGGCCCAGCGGTGCATCCTGTACCTGATGCAGGCCGGTAACCGCTTTCGGCCGAATGCGCCAGACCAGCACCAGGGCAAAGAATACGAAGAAGGCATACAGCATCTGCGCGCCCAGCACTTTCATCAGAACGCCTGCCGCCAGCGGGCCGACGCATGCACCCACACCGTAGGTCACCAACAGCATCGCCGTCAGCGATACCCGGCGCTCGCTT > ACB122/4982504‑4982773 | ggcaaaagcatcagcatagacggctagccagacggtggatgaccagcaagccacggcctctcgaataaccttttaaatcatatatttacagaacgaatgtcctaatttttgccttatctcggcataaccccggCaaa > 2:209271‑M2/134‑137 (MQ=255)ggcaaaagcatcagcatagacggctagccagacggtggatgaccagcaagccacggcctctcgaataaccttttaaatcatatatttacagaacgaatgtcctaatttttgccttatctcggcataaccccggCaaa > 5:258881‑M2/134‑137 (MQ=255) caaaagcatcagcatagacggctagccagacggtggatgaccagcaagccacggcctctcgaataaccttttaaatcatatatttacagaacgaatgtcctaatttttgccttatctcggcataaccccggCAAAGa > 1:113940‑M2/132‑137 (MQ=255) aaagcatcagcatagacggctagccagacggtggatgaccagcaagccacggcctctcgaataaccttttaaatcatatatttacagaacgactgtcctaatttttgcattatctcggcataaccacggCAAAGAAt > 8:251108‑M2/130‑137 (MQ=255) aaagcatcagcatagacggctagccagacggtggatgaccagcaagccacggcctctcgaataaccttttaaatcatatatttacagaacgaatgtcctaatttttgccttatctcggcataaccccggCAAAGAAt > 6:147307‑M2/130‑137 (MQ=255) gcatcagcatagacggctagccagacggtgtatgaccagcaagccacggcctctcgaataaccttttaaatcatatatttacagaacgaatgtcctaatttttgccttatctcggcataaccccggCAAAGAATACg < 1:67497‑M2/11‑1 (MQ=255) gcatcagcatagacggctagccagacggtggatgaccagcaagccacggcctctcgaataaccttttaaatcatatatttacagaacgaatgtcctaatttttgccttatctcggcataaccccggCAAAGAATACg < 3:57160‑M2/11‑1 (MQ=255) gcatcagcatagacggctagccagacggtggatgaccagcaagccacggcctctcgaataaccttttaaatcatatatttacagaacgaatgtcctaatttttgccttatctcggcataaccccggCAAAGAATACg < 3:121450‑M2/11‑1 (MQ=255) gcatcagcatagacggctagccagacggtggatgaccagcaagccacggcctctcgaataaccttttaaatcatatatttacagaacgaatgtcctaatttttgccttatctcggcataaccccggCAAAGAATACg < 2:301213‑M2/11‑1 (MQ=255) gcatcagcatagacggctagccagacggtggatgaccagcaagccacggcctctcgaataaccttttaaatcatatatttacagaacgaatgtcctaatttttgccttatctcggcataaccccggCAAAGAATACg < 5:318659‑M2/11‑1 (MQ=255) gcatcagcatagacggctagccagacggtggatgaccagcaagccacggcctctcgaataaccttttaaatcatatatttacagaacgaatgtcctaatttttgccttatctcggcataaccccggCAAAGAATACg < 1:283682‑M2/11‑1 (MQ=255) catcagcatagacggctagccagacggtggatgaccagcaagccacggcctctcgaataaccttttaaatcatatatttacagaacgaatgtcctaatttttgccttatctcggcataaccccggCAAAGAATACga > 2:96876‑M2/126‑137 (MQ=255) catcagcatagacggctagccagacggtggatgaccagcaagccacggcctctcgaataaccttttaaatcatatatttacagaacgaatgtcctaatttttgccttatctcggcataaccccggCAAAGAATACga < 4:163164‑M2/12‑1 (MQ=255) cagcatagacggctagccagacggtggatgaccagcaagccacggcctctcgaataaccttttaaatcatatatttacagaacgaatgtcctaatttttgccttatctcggcataaccccggCAAAGAATACgaaga < 6:204399‑M2/15‑1 (MQ=255) atagacggctagccagacggtggatgaccagcaagccacggcctctcgaataaccttttaaatcatatatttacagaacgaatgtcctaatttttgccttatctcggcataaccccggCAAAGAATACGAAGAAGGc < 5:173677‑M2/19‑1 (MQ=255) atagacggctagccagacggtggatgaccagcaagccacggcctctcgaataaccttttaaatcatatatttacagaacgaatgtcctaatttttgccttatctcggcataaccccggCAAAGAATACGAAGAAGGc < 3:15709‑M2/19‑1 (MQ=255) tagacggctagccagacggtggatgaccagcaagccacggcctctcgaataaccttttaaatcatatatttacagaacgaatgtcctaatttttgccttatctcggcataaccccggCAAAGAATACGAAGAAGGCa > 6:219601‑M2/118‑137 (MQ=255) agccagacggtggatgaccagcaagccacggcctctcgaataaccttttaaatcatatatttacagaacgaatgtcctaatttttgccttatctcggcataaccccggCAAAGAATACGAAGAAGGCATACAGCATc < 1:209271‑M2/29‑1 (MQ=255) agccagaccgtggctgaccagcaagccacggcctctcgaataaccttttaaatcatatatttacagaacgaatgtcctaatttttgccttatctcgtcataaccccggCAAAGAATACGAAGAAGGCATACTGCATc < 2:280748‑M2/29‑1 (MQ=255) ccagacggtggatgaccagcaagccacggcctctcgaataaccttttaaatcatatatttacagaacgaatgtcctaatttttgccttatctcggcataaccccggCAAAGAATACGAAGAAGGCATACAGCATCTg > 1:310748‑M2/107‑137 (MQ=255) ccagacggtggatgaccagcaagccacggcctctcgaataaccttttaaatcatatatttacagaacgaatgtcctaatttttgccttatctcggcataaccccggCAAAGAATACGAAGAAGGCATACAGCATCTg > 2:233189‑M2/107‑137 (MQ=255) ccagacggtggatgaccagcaagccacggcctctcgaataaccttttaaatcatatatttacagaacgaatgtcctaatttttgccttatctcggcataaccccggCAAAGAATACGAAGAAGGCATACAGCATCTg > 4:82097‑M2/107‑137 (MQ=255) ccagacggtggatgaccagcaagccacggcctctcgaataaccttttaaatcatatatttacagaacgaatgtcctaatttttgccttatctcggcataaccccggCAAAGAATACGAAGAAGGCATACAGCATCTg > 4:169165‑M2/107‑137 (MQ=255) cggtggatgaccagcaagccacggcctctcgaataaccttttaaatcatatatttacagaacgaatgtcctaatttttgccttatctcggcataaccccggCAAAGAATACGAAGAAGGCATACAGCATCTgcgcgc < 1:163296‑M2/36‑1 (MQ=255) cggtggatgaccagcaagccacggcctctcgaataaccttttaaatcatatatttacagaacgaatgtcctaatttttgccttatctcggcataaccccggCAAAGAATACGAAGAAGGCATACAGCATCTgcgcgc > 1:165330‑M2/102‑137 (MQ=255) gtggatgaccagcaagccacggcctctcgaataaccttttaaatcatatatttacagaacgaatgtcctaatttttgccttatctcggcataaccccggCAAAGAATACGAAGAAGGCATACAGCATCTGCGCGccc > 8:312325‑M2/100‑137 (MQ=255) gaccagcaagccacggcctctcgaataaccttttaaatcatatatttacagaacgaatgtcctaatttttgccttatctcggcataaccccggCAAAGAATACGAAGAAGGCATACAGCATCTgcgcgc > 8:289116‑M2/94‑129 (MQ=255) gaccagcaagccacggcctctcgaataaccttttaaatcatatatttacagaacgaatgtcctaatttttgccttatctcggcataaccccggCAAAGAATACGAAGAAGGCATACAGCATCTgcgcgc < 7:289116‑M2/36‑1 (MQ=255) agcaagccacggcctctcgaataaccttttaaatcatatatttacagaacgaatgtcctaatttttgccttatctcggcataaccccggCAAAGAATACGAAGAAGGCATACAGCATCTGCGCGCCCAGCACTTtca > 1:287744‑M2/90‑137 (MQ=255) agccacggcctctcgaataaccttttaaatcatatatttacagaacgaatgtcctaatttttgccttatctcggcataaccccggCAAAGAATACGAAGAAGGCATACAGCATCTGCGCGCCCAGCACTttcatcat > 1:310230‑M2/86‑136 (MQ=255) gCCCAGCGGTGCATCCTGTACCTGATGCAGGCCGGTAACCGCTTTCGGCCGAATGCGCCAGACCAGCACCAGGGCAAAGAATACGAAGAAGGCATACAGCATCTGCGCGCCCAGCACTTTCATCAGAACGCCTgccg > 4:194284/1‑137 (MQ=255) gaataaccttttaaatcatatatttacagaacgaatgtcctaatttttgccttatctcggcataaccccggCAAAGAATACGAAGAAGGCATACAGCATCTGCGCGCCCAGCACTTTCATCAGAACGCCTGCCGCCa > 3:276093‑M2/72‑137 (MQ=255) gaataaccttttaaatcatatatttacagaacgaatgtcctaatttttgccttatctcggcataaccccggCAAAGAATACGAAGAAGGCATACAGCATCTGCGCGCCCAGCACTTTCATCAGAACGCCTGCCGCCa > 7:90194‑M2/72‑137 (MQ=255) gaataaccttttaaatcatatatttacagaacgaatgtcctaatttttgccttatctcggcataaccccggCAAAGAATACGAAGAAGGCATACAGCATCTGCGCGCACAGCACTTTCATCAGAACGCCTGCCGCCa > 7:294182‑M2/72‑137 (MQ=255) ataaccttttaaatcatatatttacagaacgaatgtcctaatttttgccttatctcggcataaccccggCAAAGAATACGAAGAAGGCATACAGCATCTGCGCGCCCAGCACTTTCATCAGAACGCCTGCCGCCAGc < 2:165330‑M2/68‑1 (MQ=255) tttaaatcatatatttacagaacgaatgtcctaatttttgccttatctcggcataaccccggCAAAGAATACg > 4:146826‑M2/63‑73 (MQ=255) tttaaatcatatatttacagaacgaatgtcctaatttttgccttatctcggcataaccccggCAAAGAATACg < 3:146826‑M2/11‑1 (MQ=255) ttaaatcatatatttacagaacgaatgtcctaatttttgccttatctcggcataaccccggCAAAGAATACGAAGAAGGCATACAGCATCTGCGCGCCCAGCACTTTCATCAGAACGCCTGCCGCCAGCGGGCCGAc < 5:219601‑M2/76‑1 (MQ=255) ttaaatcatatatttacagaacgaatgtcctaatttttgccttatctcggcataaccccggCAAAGAATACGAAGAAGGCATACAGCATCTGCGCGCCCAGCACTTTCATCAGAACGCCTGCCGCCAGCGGGCCGAc < 6:258881‑M2/76‑1 (MQ=255) catatatttacagaacgaatgtcctaatttttgccttatctcggcataaccccggCAAAGAATACGAAGAAGGCATACAGCATCTGCGCGCCCAGCACTTTCATCAGAACGCCTGCCGCCAGCGGGCCGACGCATGc < 2:94809‑M2/82‑1 (MQ=255) aatatatttacagaacgaatgtcctaatttttgccttatctcggcataaccccggCAAAGAATACGAAGAAGGCATACAGCATCTGCGCGCCCAGCACTTTCATCAGAACGCCTGCCGCCAGCGGGCCGACGCATGc < 5:171348‑M2/82‑1 (MQ=255) tatatttacagtacgaatgtcctaatttttgcgttatctcggcattaccccggCAAAGAATACGAAGAAGGCATACAGCATCTGCGCGCCCAGCACTTTCATCAGAACGCCTGCCGCCAGCGGGCCGACGCATGCAc < 1:237043‑M2/84‑1 (MQ=255) tatatttacagaacgaatgtcctaatttttgccttatctcggcataaccccggCAAAGAATACGAAGAAGGCATACAGCATCTGCGCGCCCAGCACTTTCATCAGAACGCCTGCCGCCAGCGGGCCGACGCATGCAc < 1:54949‑M2/84‑1 (MQ=255) cTGATGCAGGCCGGTAACCGCTTTCGGCCGAATGCGCCAGACCAGCACCAGGGCAAAGAATACGAAGAAGGCATACAGCATCTGCGCGCCCAGCACTTTCATCAGAACGCCTGCCGCCAGCGGGCCGACGCATGCAc < 7:193227/137‑1 (MQ=255) gaacgaatgtcctaatttttgccttatctcggcataaccccggCAAAGAATACGAAGAAGGCATACAGCATCTGCGCGCCCAGCACTTTCATCAGAACGCCTGCCGCCAGCGGGCCGACGCATGCACCCACACCGTa < 7:88495‑M2/94‑1 (MQ=255) ccGGTAACCGCTTTCGGCCGAATGCGCCAGACCAGCACCAGGGCAAAGAATACGAAGAAGGCATACAGCATCTGCGCGCCCAGCACTTTCATCAGAACGCCTGCCGCCAGCGGGCCGACGCATGCACCCACACCGTa > 5:183127/1‑137 (MQ=255) gaatgtcctaatttttgccttatctcggcataaccccggCAAAGAATACGAAGAAGGCATACAGCATCTGCGCGCCCAGCACTTAAATCAGAACGCCTGCCGCCAGCGGGCCGACGCATGCACCCACACCGTAGgta > 1:170839‑M2/40‑136 (MQ=255) atgtcctaatttttgccttatctcggcataaccccggCAAAGAATACGAAGAAGGCATACAGCATCTGCGCGCCCAGCACTTTCATCAGAACGCCTGCCGCCAGCGGGCCGACGCATGCACCCACACCGTAGGTCAc > 2:78311‑M2/38‑137 (MQ=255) ttgccttatctcggcataaccccggCAAAGAATACGAAGAAGGCATACAGCATCTGCGCGCCCAGCACTTTCATCAGAACGCCTGCCGCCAGCGGGCCGACGCATGCACCCACACCGTAGGTCACCAACAGCATCGc < 1:153254‑M2/112‑1 (MQ=255) ttgccttatctcggcataaccccggCAAAGAATACGAAGAAGGCATACAGCATCTGCGCGCCCAGCACTTTCATCAGAACGCCTGCCGCCAGCGGGCCGACGCATGCACCCACACCGTAGGTCACCAACAGCATCGc < 5:208917‑M2/112‑1 (MQ=255) ccccggCAAAGAATACGAAGAAGGCATACAGCATCTGCGCGCCCAGCACTTTCATCAGAACGCCTGCCGCCAGCGGGCCGACGCATGCACCCACACCGTAGGTCACCAACAGCATCGCCGTCAGCGATACCCGgcgc < 7:312325‑M2/131‑1 (MQ=255) ccggCAAAGAATACGAAGAAGGCATACAGCATCTGCGCGCCCAGCACTTTCATCAGAACGCCTGCCGCCAGCGGGCCGACGCATGCACCCACACCGTAGGTCACCAACAGCATCGCCGTCAGCGATACCCGGcgctc < 3:185221‑M2/133‑1 (MQ=255) aGGGCAAAGAATACGAAGAAGGCATACAGCATCTGCGCGCCCAGCACTTTCATCAGAACGCCTGCCGCCAGCGGGCCGACGCATGCACCCACACCGTAGGTCACCAACAGCATCGCCGTCAGCGATACCCGGcgctc < 3:194284/137‑1 (MQ=255) cAAAGAATACGAAGAAGGCATACAGCATCTGCTCGCCCAGCACATTCATCAGAAAGACTGCCGCCAGCGGGACGACGCATGCTCCCACACCGTAGGTCACCAACAGCATCGCCGTCAGCGATACCCGGCGCTAGCtt > 8:11524/1‑137 (MQ=255) | TCCACCCGCGGGTCCAGCGCCGCCGACAATGGCGAACCGGCCGCCGGCATCGCCACGTGGCCCAGCGGTGCATCCTGTACCTGATGCAGGCCGGTAACCGCTTTCGGCCGAATGCGCCAGACCAGCACCAGGGCAAAGAATACGAAGAAGGCATACAGCATCTGCGCGCCCAGCACTTTCATCAGAACGCCTGCCGCCAGCGGGCCGACGCATGCACCCACACCGTAGGTCACCAACAGCATCGCCGTCAGCGATACCCGGCGCTCGCTT > ACB122/4982504‑4982773 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |