| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | ACB122 | = 5981427 | 41 (0.620) | 6 (0.100) | 6/218 | NT | 16.9% | intergenic (+65/‑624) | kefC_3/CJ019_05604 | Glutathione‑regulated potassium‑efflux systemprotein KefC/hypothetical protein |
| ? | ACB122 | 5981619 = | 21 (0.340) | intergenic (+257/‑432) | kefC_3/CJ019_05604 | Glutathione‑regulated potassium‑efflux systemprotein KefC/hypothetical protein | |||||
CCTGGCGCACGCCTCGATATCGCGTCGTACAAACAAGGCGGTCGCGCGCGCCTGGCACAGGAGGGATTGGCCAGAAACAAACGTAGGAGCGGGTTTACCCGCGAA‑GCGCCGCGCGGGCGGCGCTCGATCTCATGGGCGCCCAAAAACTATCGCCAGGCACCTGGAAGCCATCCTGCAATTTCCTGACGATCACCTCGCCGCCATGACGCGAACTCACAAAAACCATCACAAATCGTCTAATTCTCAGCTGGGTC > ACB122/5981495‑5981748 | cagacggccaaggaggcgcgggtggagctggagcggttgtttgattcggatgcggactgaggccttttggcgcgtgccttgagggttgtattgcctgtgagattgggcgccgcccgcgcggcgctCGATCTCATg > 7:120443‑M2/126‑135 (MQ=255) agacggccaaggaggcgcgggtggagctggagcggtgggttgattaggatgcggccgggggccttttggcgcgtgcctttcgggttgtagttcctgtgagcttgggcgccgcccgcgcggcgctCGCTCGCATgg > 1:174556‑M2/125‑135 (MQ=255) cgcACGCCTCGATATCGCGTCGTACAAACAAGGCGGTCGCGCGCGCCTGGCACAGGAGGGATTGGCCAGAAACAAACGTAGGAGCGGGTTTACCCGCGAA‑GCGCCGCGCCGGCGGCGCACGCACACCTGGGCGcc > 6:137222/1‑135 (MQ=17) cTCGATATCGCGTCGTACAAACAAGGCGGTCGCGCGCGCCTGGCACAGGAGGGATTGGCCAGAAACAAACGTAGGAGCGGGTTTACCCGCGAA‑GCGCCCCGCGGGCGGGCCGCGGTGGCAAGGGCGCCCaaaaa > 2:175398/1‑134 (MQ=17) gcgggtggagctggagcggttgtttgattctgatgcggactgaggccttttggcgcgtgccttgagggttgtagtgcctgtgagattgggcgccgcccgcgcggcgctCGATCTCATGGGCGCCCAAAAACTATc < 8:120443‑M2/27‑1 (MQ=255) ggtggagctggagcggttgtttgattcggatgcggactgaggccttttggcgcgtgccttgagggttgtagtgcctgtgagattgggcgccgcccgcgcggcgctCGATCTCATGGGCGCCCAAAAACTATCg > 7:302976‑M2/106‑133 (MQ=255) cggggagtACAAACAGGGCGGGCGCGCGCGCCTGGAAAGGGTGGGTGTGCCCTGAAACAAACGTTGGAGCGTGTTAACCCGCGAA‑GCGCCGCGCGGGCGGCGCTCGATCTCATGGGCGCCCAAAAACTATCGcc < 6:350591/128‑1 (MQ=17) gtcgtACAAACAAGGCGGTCGCGCGCGCCTGGCACAGGAGGGATTGGCCAGAAACAAACGTAGGAGCGGGTTTACCCGCGAA‑GCGCCGCGCGGGCGGCGCTCGATCTCATGGGCGCCCAAAAACAAACGCCAGGc > 2:263319/1‑135 (MQ=255) gtcgtACAAACAAGGCGGTCGCGCGCGCCTGGCACAGGAGGGATTGGCCAGAAACAAACGTAGGAGCGGGTTTACCCGCGAA‑CCGCCGCGCGGGCGGCGCTCGAGCTCAAGGGCGCCCCAAAACTAAAGCCACGc > 1:261150/1‑135 (MQ=17) cgtACAAACAAGGCGGTCGCGCGCGCCTGGCACAGGAGGGATTGGCCAGAAACAAACGTAGGAGCGGGTTTACCCGCGAA‑GCGCCGCGCGGGCGGCGCTCGATCTCATGGGCGCCCAAAAACTATCGCCACGCa > 8:369449/1‑134 (MQ=255) tACAAACAAGGCGGTCGCGCGCGCCTGGCACAGGAGGGATTGGCCAGAAACAAACGTAGGAGCGGGTTTACCCGCGAA‑GCCCCGCGCGGGCGGCGCTCGAACTCATGGGCGCCCAAAAAATATCGCCACGCACCt > 8:140488/1‑135 (MQ=255) caaacacGGCGGGCGCGCGCGCCGGGCACCGGAGGGATTGGCCACAACCAACCGTAGGAGCGGGTTTACCCGCGAA‑GCGCCGCGCGGGCGGCGCTCGATCTCTTGGGCGCCCAAAAACTATCGCCAGGCACCTgg < 6:244661/135‑1 (MQ=21) aaacaaGGCGGTCGCGCGCGCCTGGCACAGGAGGGATTGGCCAGAAACAAACGTAGGAGCGGGTTTACCCGCGAA‑GCGCCGTGCGGGCGGCGCTCGATCTCATGGGCGCCCAAAAACTATCGCCAGGCACCTg > 3:300803/1‑133 (MQ=255) gTCGCGCGCGCCTGGCACAGGAGGGATTGGCCAGAAACAAACGTAGGAGCGGGTTTACCCGCGAA‑GCGCCGCGCGGGCGGCGCTCGCTCTCATGGGCGCCCAAAAACTATCGCCAGGCACCTGGAAGCCATCCt > 1:22626/1‑134 (MQ=255) gctgcggactgcggcctttgggggcgtgcctggaggggtgcagggcctgtgacagggggcgccgcgcgcgcggcgctCGATCTCATGGGCGCCCAAAAACTATCGCCAGGCACCTGGAAGCCATCCTGCAAttt < 3:342305‑M2/57‑1 (MQ=255) ttGGCCAGAAACAAACGTAGGAGCGGGTTTACCCGCGAA‑GCGCCCCGCGGGCGGCGCGCGCTCTCATGGGCGCCCAAAAACAATAGCCAGGCACCCGGCACCCCTCCGGCAAATTACATACGATCACCTagcccc > 1:441702/1‑133 (MQ=18) ggCCAGAAACAAACGTAGGAGCGGGTTTACCCGCGAA‑GCGCCGCGCGGGCGGCGCTCGCTCTCATGGGCGCCCAAAAACTATCGCCCGGCACCTGGAAGCCATCCTGCAATTTCCTGACGATCACCTCGCCGCCa > 6:330624/1‑135 (MQ=255) ggCCAGAAACAAACGTAGGAGCGGGTTTACCCGCGAA‑GCGCCGCGCGGGCGGCGCTCGATCTCATGGGCGCCCAAAAACTATCGCCAGGCACCTGGAAGGCATCCTGCAATTTCCTGAAGCTCACCTCGCCGCCa > 3:225021/1‑135 (MQ=255) ggCCAGAAACAAACGTAGGAGCGGGTTTACCCGCGAA‑GCGCCGCGCGGGCGGCGCTCGATCTCATGGGCGCCCAAAAACTATCGCCAGGCACCTGGAAGCCATCCTGCAATTTCCTGACGATCACCTCGCCGCCa > 8:303066/1‑135 (MQ=255) ggCCAGAAACAAACGTAGGAGCGGGTTTACCCGCGAA‑GCGCCGCGCGGGCGGCGCTCGATCTCATGGGCGCCCAAAAACTATCGCCAGGCACCGGGAAGCCATCCGGCAATTTCCTGACGATCACCTCGCCGCCa > 6:167807/1‑135 (MQ=255) ggCCAGAAACAAACGTAGGAGCGGGTTTACCCGCGAA‑GCGCCGCGCCGGCGGCGCGCGCTCGCCTGGGCGCCCAAAAACTATCGCCAGGCCCCTGGCACCCATCCCGCAAATTCCTGACGAACCCCTCGCCGCCa > 2:424870/1‑135 (MQ=21) gTAGGAGCGGGTTTACCCGCGAA‑GCGCCGCGCGGGCGGCGCTCGATCTCATGGGCGCCCAAAAACTATCGCCAGGCACCTGGAAGCCCTCCAGCAATTTCCTGACGATCACCTCGCCGCCATGACGCGCACTca > 8:265780/1‑134 (MQ=255) tACCCGCGAA‑GCGCCGCGCGGGCGGCGCTCGCTCTCATGGGCGCCCAAAAACTATCGCCACGCACCTGGAAGCCATCCTGCAATTTCCTGACGCTCACCTCCCCGCCCTTCCGCGAACTCACAAAAACCATcac > 2:256281/1‑134 (MQ=38) tACCCGCCAACGCGCCGCGGGGGCGGGGCTGGATCTCATTGGCGCCCAAAAACTATCGCCAGGCACCTGGAAGCCATCCTGCAATTTGCTGACGATCACCTCGCCGCCATGACGCGAACTCACAAAAACCATca < 1:450547/134‑1 (MQ=255) cgcgAA‑GCGCCGCGCGGGCGGCGCTCGCTCTCCTGGGCGCCCAAAAACTATCGCCCGGCCCCTGGCAGCCATCCGGCAATTTCCTGACGCTCCCCTCGCCGCCATGCCGCGAACTCACAAAAACCATCACaaaac > 2:299942/1‑133 (MQ=255) cgcgAA‑GCGCCGCGCGGGCGGCGCTCGATCTCATGGGCGCCCAAAAACTATCGCCAGGCACCTGGAAGCCATCCTGCAATTTCCTGACGATCACCTCGCCGCCATGACGCGAACTCACAAAAACCATCACAAATc < 6:176098/135‑1 (MQ=255) gccgcccgcgcggcgctCGATCTCATGGGCGCCCAAAAACTATCGCCAGGCACCTGGAAGCCATCCTGCAAGTTCCTGACGATCACCTCGCCGCCATGACGCGAACTCACAAAAACCATCACAAATCGTCTAAtt > 4:392554‑M2/18‑135 (MQ=255) cgcgGGCGGCGCTCGATCTCATGGGCGCCCAAAAACTATCGCCAGGCACCTGGAAGCCATCCTGCAATTTCCTGACGATCACCTCGCCGCCATGACGCGAACTCACAAAAACCATCACAAATCGTCTAATTCTCa < 7:369449/135‑1 (MQ=255) gcgggcggCGCTCGATCTCATGGGCGCCCAAAAACTATCGCCAGGCACCTGGAAGCCATCCTGCAATTTCCTGACGATCACCTCGCCGCCATGACGCGAACTCACAAAAACCATCACAAATCGTCTAATTCTCAg < 5:444916/135‑1 (MQ=255) gcgctCGATCTCATGGGCGCCC‑AAAACTATCGCCCGGCACCTGGAAGCCATCCTGCAATTTCCTGACGATCACCACGCCGCCATGACGCGAACTCACAAAAACCATCACAAATCGTCGAATTCTCAGCAGGGTc > 8:409262‑M2/6‑134 (MQ=255) cgctCGATCTCATGGGCGCCCAAAAACTATCGCCAGGCACCTGGAAGCCATCCTGCAATTTCCTGACGATCACCTCGCCGCCATGACGCGAACTCACAAAAACCATCACAAATCGTCTAATTCTCAGCTGGGTc > 2:260983‑M2/5‑134 (MQ=255) | CCTGGCGCACGCCTCGATATCGCGTCGTACAAACAAGGCGGTCGCGCGCGCCTGGCACAGGAGGGATTGGCCAGAAACAAACGTAGGAGCGGGTTTACCCGCGAA‑GCGCCGCGCGGGCGGCGCTCGATCTCATGGGCGCCCAAAAACTATCGCCAGGCACCTGGAAGCCATCCTGCAATTTCCTGACGATCACCTCGCCGCCATGACGCGAACTCACAAAAACCATCACAAATCGTCTAATTCTCAGCTGGGTC > ACB122/5981495‑5981748 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |