| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | ACB122 | 4383137 = | NA (NA) | 5 (0.090) | 5/232 | NT | 5.9% | intergenic (‑13/+70) | CJ019_04133/CJ019_00698 | hypothetical protein/hypothetical protein |
| ? | ACB122 | = 5388386 | 80 (1.430) | intergenic (‑1746/‑36) | CJ019_05070/CJ019_05072 | hypothetical protein/hypothetical protein | |||||
GGGACCGGCTCGGGCTGGTCTCGATACTGGATACGATTAACCGGCTTAGCCGCGTAACCTGAACCGCCGTGTACGGAACCGTACGCACGGTGGTGTGAGAGGACGGCGGGTGTGAATCCGCCTCCTACTCGAt‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < ACB122/4383268‑4383137‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑TCTGAAAGTACTGACGAGCTGCAAGAACGAAATGCGCACTTGCCTTTTTACCGACGAGTATAGTTGTACATGCCATTATCAGTCTCCTTTACAGAGTCGTGAGTACTGATAGTAGTGAGAAAATCACGGATAATGG < ACB122/5388386‑5388251 GGGACCGGCTCGGGCTGGTCTCGATACTGGATACGATTAACCGGCTTAGCCGCGTAACCTGAACCGCCGTGTACGGAACCGTACGCACGGTGGTGTGAGAGGACGGCGGGTGTGAATCCGCCTCCTACTCGAT < 6:177917/133‑1 CTGGATACGATTAACCGGCTTAGCCGCGTAACCTGAACCGCCGTGTACGGAACCGTACGCACGGTGGTGTGAGAGGACGGCGGGTGTGAATCCGCCTCCTACTCGATCTGAAAGTACTGACGAGCTGCAAGAAC > 5:158484/1‑134 ACGATTAACCGGCTTAGCAGCGTAACCTGAACCGCCGTGTACGGAACCGTACGCACGGTGGTGTGAGAGGACGGCGGCTGTGAATCCGCCTCCTACTCGATCTGAAAGTACTGACGAGCTGCAAGAACGAAATGC > 5:258363/1‑135 CCGCGTAACCTGAACCGCCGTGTACGGAACCGTACGCACGGTGGTGTGAGAGGACGGCGGGTGTGAATCCGCCTCCTACTCGATCTGAAAGTACTGACGAGCTGCAAGAACGAAATGCGCACTTGCCTTTTTACC < 6:158484/135‑1 TAACCTGACCCGCGGTGTACGGAACCGTACGCACGGTGGTGTGAGAGGACGGCGGGTGTGAATCCGCCTCCTACTCGATCTGAAAGTACTGACGAGCTGCAAGAACGAAATGCGCACTTGCCTTTTTACCGACGA < 1:189091/135‑1 GTGAGAGGTCGGCGGGTGTGAATCCTCCTCCTACTCGATCTGAAAGTACTGACGAGCTGCTAGAACGAAATGCGCACTTTCCTTTTTACCGACGAGTATAGTTGTACATGCCATTATCAGTCTCCTTTACAGAGT < 6:258363/135‑1 TCTGAAAGTACTGACGAGCTGCAAGAACGAAATGCGCACTTGCCTTTTTACCGACGAGTATAGTTGTACATGCCATTATCAGTCTCCTTTACAGAGTCGTGAGTACTGATAGTAGTGAGAAAATCACGGATAATGG < 8:1924/136‑1 GGGACCGGCTCGGGCTGGTCTCGATACTGGATACGATTAACCGGCTTAGCCGCGTAACCTGAACCGCCGTGTACGGAACCGTACGCACGGTGGTGTGAGAGGACGGCGGGTGTGAATCCGCCTCCTACTCGAt‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < ACB122/4383268‑4383137‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑TCTGAAAGTACTGACGAGCTGCAAGAACGAAATGCGCACTTGCCTTTTTACCGACGAGTATAGTTGTACATGCCATTATCAGTCTCCTTTACAGAGTCGTGAGTACTGATAGTAGTGAGAAAATCACGGATAATGG < ACB122/5388386‑5388251 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |