| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | ACB122 | = 5981413 | 31 (0.550) | 5 (0.100) | 5/218 | NT | 15.2% | intergenic (+51/‑638) | kefC_3/CJ019_05604 | Glutathione‑regulated potassium‑efflux systemprotein KefC/hypothetical protein |
| ? | ACB122 | 5981635 = | 27 (0.520) | intergenic (+273/‑416) | kefC_3/CJ019_05604 | Glutathione‑regulated potassium‑efflux systemprotein KefC/hypothetical protein | |||||
ATGACCGGGCCAAGGTGATGCAGACGGCCAAGGAGGCGCGGGTGGAGCTGGAGCGGTTGTTTGATTCGGATGCGGACTGAGGCCTTTTGGCGCGTGCCTTGAGGGTTGTAGTGCCTGTGAGATTGGGCGCCGCCCGCGCGGCGCTTCGCGGGTAAACCCGCTCCTACGTTTGTTTCGGGCCAGTTATTCCTGTGGGACGCGCACGCGAGCCCCCTGGCGCACGCCTCGATATCGCGTCGTACAAACAAGGCGGTCGCGCGCGCCTG > ACB122/5981283‑5981548 | atgaCCGGGCCAAGGTGATGCAGACGGCCAAGGAGGCGCGGGTGGAGCTGGAGCGGTTGTTTGATTCGGATGCGGACTGAGGCCTTTTGGCGCGTGCCTTGAGGGTTGTAGTGCCTGTGAGATTGGGCGccgcccg > 4:364931/1‑136 (MQ=255)atgaCCGGGCCAAGGTGATGCAGACGGCCAAGGAGGCGCGGGTGGAGCTGGAGCGGTTGTTTGATTCGGATGCGGACTGAGGCCTTTTGGCGCGTGCCTTGAGGGTTGTAGTGCCTGTGAGATTGGGCGccgcccg > 3:200560/1‑136 (MQ=255) gggCCAAGGTGATGCAGACGGCCAAAGAGGCGCGGGTGGAGCTGGAGCGGTTGTTTGATTCGGATGCGGACTGAGGCCTTTTGGCGCGGGCCTTGAGGGTTGTAGTGCCTGTGAGATTGGGCGCCGCCCGCgcgg < 2:287562/135‑1 (MQ=255) aGACGGCCAAGGAGGCGCGGGTGGAGCTGGAGCGGTTGTTTGATTCGGATGCGGACTGAGGCCTTTTGGCGCGTGCCTTGAGGGTTGTAGTGCCTGTGAGATTGGGCGCCGCCCGCgcgg > 5:301533/1‑120 (MQ=255) aGACGGCCAAGGAGGCGCGGGTGGAGCTGGAGCGGTTGTTTGATTCGGATGCGGACTGAGGCCTTTTGGCGCGTGCCTTGAGGGTTGTAGTGCCTGTGAGATTGGGCGCCGCCCGCgcgg < 6:301533/120‑1 (MQ=255) aGACGGCCAAGGAGGCGCGGGGGGAGCTGGAGCGGTTGTTTGAATGCGATGCGGACTGAGGCCTTTTGGCGCGTGCCTTGAGGGTTGTATTTCATGTGAGATTGGGCTCAcaaaaactatcgccaggcccctgg > 3:6395‑M1/1‑110 (MQ=255) cgGGTGGAGCTGGAGCGGTTGTGTGATTCGGATGCGGACTGAGGCCTTTTGGCGCGGGCCTTGAGGGTTGTAGTGCCTGTGAGATTGGGCGCCcaaaaactatcgccaggcacctggaagccatcctgcaatttc < 2:279018‑M1/135‑43 (MQ=255) ggtgcgctggagcGGTTGTTGGATGCGGAGGCGGACGGCGGCCTTTGGGCGCGTGCCTTGAGGGTGGTAGTGCCGGGGAGTTTGGGCGCCGCCCGCGCGGCGCTTCGCGGGTAAACCCGCTCCTACGTTTGTTTc < 5:41259/130‑1 (MQ=21) gggaggtggagcGGTTGTTTGATTCGGATGCGGCGTGAGGCCTTTTGGCGGGGGCGTTGTGGGTTGTCGTGCCTGTGAGATTGGGCGCCGCCCGCGCGGCGCTTCGCGGGTAAACCCGCTCCTACGTTTGTTTct < 1:302199/134‑2 (MQ=25) tggagcGGTTGTTTGATTCGGATGCGGACTGAGGCCTTTTGGCGCGTGCCTTGAGGGTTGTAGTGCCTGTGAGATTGGGCGCCGCCCGCGCGGCGCTTCGCGGGTAAACCCGCTCCTACGTTTGTTTCGGGCCAg < 6:372433/135‑1 (MQ=255) gcGGTTGTTTGATTCGGATGCGGACTGAGGCCTTTTGGCGCGTGCCTTGAGGGTTGTAGTGCCTGTGAGATTGGGCGCCGCCCGCGCGGCGCTTCGCGGGTAAACCCGCTCCTACGTTTGTTTCGGGCCAGTTAt > 4:301323/1‑135 (MQ=255) gcGGTGTTTTGATTCGGATGCGGCCTGAGGCCTTTTGGCGGGGGCCTTTAGGGTTGTAGTGCATGTGAGATTGGGCGCCGCCCGCGGGGCTCTTCGCGGGGAAACCCGCTCCTACGTTTGTTTCGGGCCaatccc < 6:330541/135‑6 (MQ=21) ggTTGTTTGATTCGGATGCGGACTGAGGCCTTTTGGCGCGTGCCTTGAGGGTTGTAGTGCCTGTGAGATTGGGCGCCGCCCGCGCGGCGCTTGGCGGGTAAACCCGCGCCTACGGTTGTTTCGGGCCAGTTAtta > 8:41224/1‑134 (MQ=255) ggTTGTTTGATTCGGATGCGGACTGAGGCCTTTTGGCGCGTGCCTTGAGGGTTGTAGTGCCTGTGAGATTGGGCGCCGCCCGCGCGGCGCTTCGCGGGTAAAACCGCTCCGACGTTTGTTTAGGGCCAGTTATTcc > 4:105923/1‑136 (MQ=255) gttTGATTCGGATGCGGACTGAGGCCTTTTGGCGCGTGCCTTGAGGGTTGTAGTGCCTGTGAGATTGGGCGCCGCCCGCGCGGCGCTTCGCGGGTAAACCCGCTCCTACGTTTGTTTCGGGCCAGTTATTCCtgtg > 4:348987/1‑136 (MQ=255) ggctGCGGCCGGAGGCCTTTGGGCGCGTGCCTTGAGGGTTGTAGTGCCTGTGAGAGTGGCCGCCGCCCGCGCGGCGCTTCGCGGGTAAACCCGCTCCTACGTTTGTTTCGGGCCAGTTATTCCTGTGGGACGCGCa < 3:364931/133‑1 (MQ=25) cGGACTGCGGCCTTTTGGCGCGTGCCTTGCGGGTGGTAGGCCCTGTGCGAGTGGGCGCCGCCCGCGCGGCGCTTCGCGGGTAAACCCGCTCCTACGTTTGTTTCGGGCCAGTTATTCCTGTGGGACGCGCAcgc < 7:41224/134‑1 (MQ=21) cGGACTGAGGCCTTTTGGCGCGTGCCTTGAGGGTTGTAGTGCCTGTGAGATTGGGCGCCcaaaaactatcgccaggcacctggaagccatcctgcaatttcctgacgatcacctcgccgccatgacgcgaactc > 1:40183‑M1/1‑59 (MQ=255) ccTTTTGGCGCGTGCCTTGAGGGTTGTAGTGCCTGTGAGATTGGGCGCCGCCCGCGCGGCGCTTCGCGGGTAAACCCGCTCCTACGTTTGTTTCGGGCCAGTTATTCCTGTGGGACGCGCACGCGAGCCCCCTgg > 2:249141/1‑135 (MQ=255) ccTTTTGGCGCGTGCCTTGAGGGGTGTAGTGCCTGTGAGATTGGGCGCCGCCCGCGCGGCGCTTCGCGGGTAAACCCGCTCCTACGTTTGTTTCGGGCCAGTTATTCCTGTGGGACGCGCACGCGAGCCCCCTGgc < 3:225544/136‑1 (MQ=255) cTTTTGGCGCGGGCCTTGAGGGTGGTAGGGCCTGTGAGATGGGGCGCCGCCCGCGCGGCGCTTCGCGGGTAAACCCGCTCCTACGTTTGTTTCGGGCCAGTTATTCCTGTGGGACGCGCACGCGAGCCCCCTGgc < 5:348720/135‑1 (MQ=255) ggCGCGTGCCTTGAGGGTTGTAGTGCCTGTGAGATTGGGCGCCGCCCGCGCGGCGCTTCGCGGGTAAACCCGCTCCTACGTTTGTTTCGGGCCAGTTATTCCTGTGGGACGCGCACGCGAGCCCCCTGGCGCACg < 3:348987/135‑1 (MQ=255) ggCGCGTGCCTTGAGGGTTGTAGTGCCTGTGAGATTGGGCGCCGCACGCGCGGCGCTTACCGCCGAAACCCCCTCCTAAGTTTTTTTCGGTCCAGTTATTTCAGTGGGACGCGCACCCGAGCCCCCAGGCGCACGc > 8:83394/1‑136 (MQ=255) gggcgTGCCTTGAGGGTGGTAGTGCCTGGGAGATGGGGCGCCGCCCGCGCGGCGCTTCGCGGGTAAACCCGCTCCTACGTTTGTTTCGGGCCAGTTATTCCTGTGGGACGCGCACGCGAGCCCCCTGGCGCACg < 5:317024/132‑1 (MQ=255) cTTGAGGGTTGTAGTGCCTGTGAGATTGGGCGCCGCCCGCGCGGCGCTTCGCGGGTAAACCCGCTCCTACGTTTGTTTCGGGCCAGTTATTCCTGTGGGACGCGCACGCGAGCCCCCTGGCGCACGCCTCGATATc < 3:105923/136‑1 (MQ=255) cTTGAGGGTTGTAGTGCCTGTGAGATTGGGCGCCGCCCGCGCGGCGCTTCGCGGGTAAACCCGCTCCTACGTTTGTTTCGGGCCAGTTATTCCTGTGGGACGCGCACGCGAGCCCCCTGGCGCACGCCTCGATATc < 3:113046/136‑1 (MQ=255) cTTGAGGGTTGTAGTGCCTGTGAGATGGGGCGCCGCCCGCGCGGCGCTTCGCGGGTAAACCCGCTCCTACGTTTGTTTCGGGCCAGTTATTCCTGTGGGACGCGCACGCGAGCCCCCTGGCGCACGCCTCGATATc < 3:48319/136‑1 (MQ=255) ttGTGGGTTTTAGTGCCTGTGAGATGGGGCGCCGCCCGCGCGGCGCTTCGCGGGTAAACCCGCTCCTACGTTTGTTTCGGGCCAGTTATTCCTGTGGGACGCGCACGCGAGCCCCCTGGCGCACGCCTCGATATc < 5:378565/135‑1 (MQ=255) aGGGTTGTAGTGCCTGTGAGATTGGGCGCCGCCCGCGCGGCGCTTCGCGGGTAAACCCGCTCCTACGTTTGTTTCGGGCCAGTTATTCCTGTGGGACGCGCACGCGAGCCCCCTGGCGCACGCCTCGATATcgcg < 3:301323/135‑1 (MQ=255) gggTTGTAGTGCCTGTGAGATTGGGCGCCcaaaaactatcgccaggcacctggaagccatcctgcaatttcctgacgatcacctcgccgccatgacgcgaactcacaaaaaccatcacaaatcgtctaattctcag < 4:6395‑M1/136‑108 (MQ=255) gggTTGTAGTGCCTGTGAGATTGGGCGCCGCCCGCGCGGCGCGTCGCGGGTAAACCCGCTCCTACGTTTGTTTCGGGCCAGTTATTCCTGTGGGACGCGCACGCGAGCCCCCTGGCGCACGCCTCGATATCGcgt < 6:306125/135‑1 (MQ=255) aGTGCCTGTGAGATTGGGCGCCcaaaaactatcgccaggcacctggaagccatcctgcaatttcctgacgatcacctcgccgccatgacgcgaactcacaaaaaccatcacaaatcgtctaattctcagctgggtc > 7:328450‑M1/1‑22 (MQ=255) gTGCCTGTGAGATTGGGCGCCGCCCGCGCGGCGCTTAGCGGGTTAACCCCCTCCTACGTTTGTTTGGGGGCATTTATTACTGTGGGACGCGCACGCCAGCCCCCATGCGCACCCCACCATATAGCGTCCTacaaa > 4:48319/1‑135 (MQ=18) gTGCCTGTGAGATTGGGCGCCGCCCGCGCGGCGCTTAGCGGGTAAACCCGCTCCTTCGTTTGTTTAGGGCCAGTTTTTACTGTGGGGCGCGCACGCGAGCCCCCTGGCGCACGCCTCGCTATCGCGTCGTacaaa > 4:113046/1‑135 (MQ=21) agctggggCGCCGCCCGCGCGGCGCGTCGCGGGTAAACCCGCTCCTACGTTTGTTTCGGGCCAGTTATTCCTGTGGGACGCGCACGCGAGCCCCCTGGCGCACGCCTCGATATCGCGTCGTACAAACAAGGCGGTc < 7:83394/131‑1 (MQ=255) ttgggggGCCGCCGGCGCGGCGCTTCGCGGGTAAACCCGCTCCTACGTTTGTTTCGGGCCAGTTATTCCTGAGGGACGCGCACGCGAGCCCCCTGGCGCACGCCTCGATATCGCGTCGAACAAACAAGGCGGTcg < 5:150056/132‑1 (MQ=18) tGGGCGCCcaaaaactatcgccaggcacctggaagccatcctgcaatttcctgacgatcacctcgccgccatgacgcgaactcacaaaaaccatcacaaatcgtctaattctcagctgggtcctacttcc < 5:75239‑M1/130‑123 (MQ=255) ggCGCCGCCCGCGCGGCGCTTCGCGGGTAAACCCGCTCCTACGTTTGTTTCGGGCCAGTTATTCCTGTGGGACGCGCACGCGAGCCCCCTGGCGCACGCCTCGATATCGCGTCGTACAAACAAGGCGGTcgcgcgc < 8:121305/136‑1 (MQ=255) ggCGCCGCCCGCGCGGCGCGTCGCGGGTAAACCCGCTCCTACGTTTGTTTCGGGCCAGTTATTCCTGTGGGACGCGCACGCGAGCCCCCTGGCGCACGCCTCGATATCGCGTCGTACAAACAAGGCGGTcgcgcgc < 8:103353/136‑1 (MQ=255) gcgcCGCCCGCGCGGCGCTTCGCGGGTAAACCCGCTCCTACGTTTGTTTCGGGCCAGTTATTCCTGTGGGACGCGCACGCGAGCCCCCTGGCGCACGCCTCGATATCGCGTCGTACAAACAAGGCGGTcgcgcgc < 2:124261/135‑1 (MQ=255) ccgcccgcGCGGCGCTTCGCGGGTAAACCCGCTCCTACGTTTGTTTCGGGCCAGTTATTCCTGTGGGACGCGCACGCGAGCCCCCTGGCGCACGCCTCGATATCGCGTCGTACAAACAAGGCGGTCGCGCGCGcc < 2:74787/135‑1 (MQ=255) ccgcccgcGCGGCGCTGCGCGGGTAAACCCGCTCCTACGTTTGTTTCGGGCCAGGTATTCCTGTGGGACGCGCACGCGAGCCCCCTGGCGCACGCCTCGATATCGCGTCGTACAAACAAGGCGGTCGCGCGCGcc < 6:354690/135‑1 (MQ=255) ccaaaaactatcgccaggcacctggaagccatcctgcaatttcctgacgatcacctcgccgccatgacgcgaactcacaaaaaccatcacaaatcgtctaattctcagctgggtcctacttccccgcgaaccattt < 4:24981‑M1/136‑136 (MQ=255) ccaaaaactatcgccaggcacctggaagccatcctgcaatttcctgacgatcacctcgccgccatgacgcgaactcacaaaaaccatcacaaatcgtctaattctcagctgggtcctacttccccgcgaaccattt < 4:46915‑M1/136‑136 (MQ=255) | ATGACCGGGCCAAGGTGATGCAGACGGCCAAGGAGGCGCGGGTGGAGCTGGAGCGGTTGTTTGATTCGGATGCGGACTGAGGCCTTTTGGCGCGTGCCTTGAGGGTTGTAGTGCCTGTGAGATTGGGCGCCGCCCGCGCGGCGCTTCGCGGGTAAACCCGCTCCTACGTTTGTTTCGGGCCAGTTATTCCTGTGGGACGCGCACGCGAGCCCCCTGGCGCACGCCTCGATATCGCGTCGTACAAACAAGGCGGTCGCGCGCGCCTG > ACB122/5981283‑5981548 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |