New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	ACB122	= 5981413	31 (0.550)	5 (0.100)	5/218	NT	15.2%	intergenic (+51/‑638)	kefC_3/CJ019_05604	Glutathione‑regulated potassium‑efflux systemprotein KefC/hypothetical protein
	?	ACB122	5981635 =	27 (0.520)					intergenic (+273/‑416)	kefC_3/CJ019_05604	Glutathione‑regulated potassium‑efflux systemprotein KefC/hypothetical protein

CGCACGCCTCGATATCGCGTCGTACAAACAAGGCGGTCGCGCGCGCCTGGCACAGGAGGGATTGGCCAGAAACAAACGTAGGAGCGGGTTTACCCGCG‑AAGCGCCGCGCGGGCGGCGCTCGATCTCATGGGCGCCCAAAAACTATCGCCAGGCACCTGGAAGCCATCCTGCAATTTCCTGACGATCACCTCGCCGCCATGACGCGAACTCACAAAAACCATCACAAATCGTCTAATTCTCAGCTGGGTCCTACTTCCCCGCGAACCATTTC  >  ACB122/5981500‑5981770                                                                                                                                         |                                                                                                                                        cgcACGCCTCGATATCGCGTCGTACAAACAAGGCGGTCGCGCGCGCCTGGCACAGGAGGGATTGGCCAGAAACAAACGTAGGAGCGGGTTTACCCGCG‑AAGCGCCGCGCGGGCGGCGCTCGATCTCATGGGCGccc                                                                                                                                         >  8:138313/1‑136 (MQ=255)        cTCGATATCGCGTCGTACAAACAAGGCGGTCGCGCGCGCCTGGCACAGGAGGGATTGGCCAGAAACAAACGTAGGAGCGGGTTTACCCGCG‑AAGCGCCCCGCGGGCGGCGGGCGCTCGCAAGGGCGgcccacaa                                                                                                                                    >  2:367178/1‑129 (MQ=14)          cGATATCGCGTCGTACAAACAAGGCGGTCGCGCGCGCCTGGCACAGGAGGGATTGGCCAGAAACAAACGTAGGAGCGGGTTTACCCGCG‑AAGCGCCGCGCGGGCGGCGCGCGATCTCATGGGCGCCCAAAAACTAt                                                                                                                                >  4:92394/1‑136 (MQ=255)                   gtcgtACAAACAAGGCGGTCGCGCGCGCCTGGCACAGGAGGGATTGGCCAGAAACAAACGTAGGAGCGGGTTTACCCGCG‑AAGCGCCGCGCGGGCGGCGCGCGATCTCATGGGCGCCCAAAAACAATCGCCAGGCa                                                                                                                       >  8:197902/1‑136 (MQ=255)                         caaacaaGGCGGTCGCGCGCGCCTGGCACAGGAGGGATTGGCCAGAAACAAACGTAGGAGCGGGTTTACCCGCG‑AAGCGCCGCGCGGGCGGCGCTCGATCTCATGGGCGCCCAAAAACTATCGCCAGGCACCTgg                                                                                                                  <  8:187979/135‑1 (MQ=255)                          aaacaaGGCGGTCGCGCGCGCCTGGCACAGGAGGGATTGGCCAGAAACAAACGTAGGAGCGGGTTTACCCGCG‑AAGCGCCGCGCGGGCGGCGCTCGATCTCAAGGGCGCCCAAAAACTATAGCCAGGCACCAGGaa                                                                                                                >  4:35914/1‑136 (MQ=255)                           agacggccaaggaggcgcggggggagctggagcggttgtttgaatgcgatgcggactgaggccttttggcgcgtgccttgagggttgtatttcatgtgagattgggctcaCAAAAACTATCGCCAGGCCCCTgg                                                                                                                  >  3:6395‑M2/111‑134 (MQ=255)                                    gTCGCGCGCGCCTGGCACAGGAGGGATTGGCCAGAAACAAACGTAGGAGCGGGTTTACCCGCG‑AAGCGCCGCGCGGGCGGCGCTCGATCTCATGGGCGCCCAAAAACTATCGCCAGGCACCTGGAAGCCATc                                                                                                          <  8:239459/132‑1 (MQ=255)                                    gTCGCGCGCGCCTGGCACAGGAGGGATTGGCCAGAAACAAACGTAGGAGCGGGTTTACCCGCG‑AAGCGCCGCGCGGGCGGCGCGCGCTCTCATGGGCGCCCAAAAAAAATAGCCAGGCACCTGGAAGCCAtacc                                                                                                        >  5:384294/1‑131 (MQ=21)                                    gTCGCGCGCGCCTGGCACAGGAGGGATTGGCCAGAAACAAACGTAGGAGCGGGTTTACCCGCG‑AAGCGCCGCGCGGGCGGCGCGCGATCTCATGGGCGCCCAAAAACTATCGCCAGGCACCTGGAAGCCATc                                                                                                          >  7:239459/1‑132 (MQ=255)                                            cgggtggagctggagcggttgtgtgattcggatgcggactgaggccttttggcgcgggccttgagggttgtagtgcctgtgagattgggcgccCAAAAACTATCGCCAGGCACCTGGAAGCCATCCTGCAATTTc                                                                                                <  2:279018‑M2/42‑1 (MQ=255)                                                     caGGAGGGATTGGCCAGAAACAAACGTAGGAGCGGGTTTACCCGCG‑AAGCGCCGCGCGGGCGGCGCTCGCTCTCCTGGGCGGCCCAAAACTATAGCCCGGCACCGGGAAGCCCTCCGGCAAATTCCTGACGagcc                                                                                      >  6:70518/1‑132 (MQ=18)                                                          gggATTGGCCAGAAACAAACGTAGGAGCGGGTTTACCCGCG‑AAGCGCCGCGCGGGCGGCGCGCGCTCTCATGGGCGCCCCAAAACTATCCCCCCGCCCCGTGAAGCCCTCCTGCAATTTCCTGGCGCTCACCTcgc                                                                                >  4:257518/1‑136 (MQ=21)                                                          gggATTGGCCAGAAACAAACGTAGGAGCGGGTTTACCCGCG‑AAGCGCCGCGCGGGCCGCGCGCGATCTCATGGGCGCCCAAAAACTATCGCCAGGCACCTTGAAGCCATCCAGCAATTTCCGGGCGCTCACCTcg                                                                                 >  5:174799/1‑135 (MQ=25)                                                               tGGCCAGAAACAAACGTAGGAGCGGGTTTACCCGCG‑AAGCGCCCCGCGGGCGGCGCGCGAACTCATTGGCGCCCCAAAACTATCGCCAGGCCCCTGGAAGCCATCCGGCCAATTACTGACGAAGACCACgccgcc                                                                            >  3:24981/1‑135 (MQ=21)                                                                ggCCAGAAACAAACGTAGGAGCGGGTTTACCCGCG‑AAGCGCCGCGCGGGCGGCGCTCGATCTCATGGGCGCCCAAAAACTATCGCCAGGCACCTGGAAGCCATCCTGCAATTTCCTGACGATCACCTCGCCGCCa                                                                           >  6:75239/1‑135 (MQ=255)                                                                   cAGAAACAAACGTAGGAGCGGGTTTACCCGCG‑AAGCGCCGCGCGGGCGGCGCGCGGTCTCATGGGCGCCCAAAAACTATAGCCCGGCCCCTGGCAGCCATCCGGCAATTTCCTGCCCATAACCACGCCGCCaagc                                                                        >  6:304716/1‑132 (MQ=21)                                                                     gAAACAAACGTAGGAGCGGGTTTACCCGCG‑AAGCGCCCCGCGGGCGGGGCTCCGTCTCAAGGGCGCCCAAAAAAAATAGCCCCGCCCCTGGAAGACATCCTGCAATTTACTGGCGATCACCTCGCCGCCCTGAcgc                                                                     >  3:227115/1‑136 (MQ=21)                                                                      aaacaaccGACGGCGCGGGTTTACCGGCG‑AAGCGCCGCGCGGGCGGCGCTCGATCTCATGGGCGCCCAAAAACTATCGCCAGGCACCTGGAAGCCATCCTGCAATTTCCTGACGATCACCTCGCCGCCATGAcgcg                                                                    <  7:364953/136‑1 (MQ=38)                                                                              gTAGGAGCGGGTTTACCCGCG‑AAGCGCCGCGCGGGCGGCGCTCGATATCATGGGCGCCCAAAAACTATACCCAGGCCCCTGGCAGCCATCCTGCAATTTACTGACGATCACCAAGCCGCCATGACGCGAACTcac                                                             >  4:157172/1‑135 (MQ=37)                                                                              cggactgaggccttttggcgcgtgccttgagggttgtagtgcctgtgagattgggcgccCAAAAACTATCGCCAGGCACCTGGAAGCCATCCTGCAATTTCCTGACGATCACCTCGCCGCCATGACGCGAACTc                                                               >  1:40183‑M2/60‑134 (MQ=255)                                                                                          tgaCCCGCGCACGCGCCGCGCGGGCGGCGCTCGATCTCATGGGCGCCCAAAAACTATCGCCAGGCACCTGGAAGCCATCCTGCAATTTCCTGACGATCACCTCGCCGCCATGACGCGAACTCACAAAAACCATcac                                                 <  3:205017/134‑1 (MQ=255)                                                                                           tACCCGGG‑AAGCGCCGCGCGTGCGGCGCTCGATCTCATGGGCTCCCAAAAACTATCGCCAGGCACCTGGAAGCCATACTGCAATTTCCTGACGATCACCTCGCCGCCATGACGCGAACTCACAAAAACCATcac                                                 <  8:292441/134‑1 (MQ=255)                                                                                               cgcg‑AAGCGCCGCGCGGGCGGCGCTCGATCTCATGGGCGCCCAAAAACTATCGCCAGGCACCTGGAAGCCATCCTGCAATTTCCTGCCGATCACCTCGCCGCCATGACGCGAACTCACAAACACCATCACCAATCg                                           >  7:223490/1‑136 (MQ=255)                                                                                                     aGCGCCGCGCGGGCGGCGCGCGCTCTCATGGGCGCCCAAAAACTATCGCCAGGCCCCTGGAAGCCCTCCTGGTATTTCCTGACGCTCACCAAGCCGCCCTGACGCGAACGCACAAAAACCATCACAAATCGTCt                                        >  2:81581/1‑134 (MQ=255)                                                                                                            gggttgtagtgcctgtgagattgggcgccCAAAAACTATCGCCAGGCACCTGGAAGCCATCCTGCAATTTCCTGACGATCACCTCGCCGCCATGACGCGAACTCACAAAAACCATCACAAATCGTCTAATTCTCAg                               <  4:6395‑M2/107‑1 (MQ=255)                                                                                                            cgcgGGCGGCGCTCGATCTCATTGGCGCCCAAAAACTATCGCCAGGCACCTGGTAGCCATCCTTCAATTTCGTGACGATCAGCTCTCCGCCATGACGCGAACTCACAAAAACCATCACAAATCGTCTAATtctga                                <  5:293768/135‑3 (MQ=255)                                                                                                            cgcgGGCGGCGCTCGATCTCATGGGCGCCCAAAAACTATCGCCAGGCACCTGGAAGCCATCCTGCTATTTCCTGACGATCACCTCGCCGCCATGACGCGAACTCACAAAAACCATCACAAATCGTCTAATTCTCa                                <  1:81581/135‑1 (MQ=255)                                                                                                            cgcgGGCGGCGCTCGATCTCATGGGCGCCCAAAAACTATCGCCAGGCACCTGGAAGCCATCCTGCAATTTCCTGACGATCACCTCGCCGCCATGACGCGAACTCACAAAAACCATCACAAATCGTCTAATTCTCAg                               <  7:205623/136‑1 (MQ=255)                                                                                                            cgcgGGCGGCGCTCGATCTCATGGGCGCCCAAAAACTATCGCCAGGCACCTGGAAGACATCCTGCAATTTCCTGACGATCACCTCGCCGCCATGACGCGAACTCACAAAAACCATCACAAATCGTCTAATTCTCAg                               <  8:60413/136‑1 (MQ=255)                                                                                                              cgggcggCGCTCGATCTCATGGGCGCCCAAAAACTATCGCCAGGCACCTGGAAGCCATCCTGCAATTTCCTGACGATCACCTCGCCGCCATGACGCGAACTCACAAAAACCATCACAAATCGTCTAATTCTCAGCt                             <  3:335188/136‑1 (MQ=255)                                                                                                               gggcggCGCGCGATCTCATGGGCGCCCAAAAACTATCGCCAGGCACCTGGAAGCCATCCTGCAATTTCCTGACGATCACCTCGCCGCCATGACGCGAACTCACAAAAACCATCACAAATCGTCTAATTCTCAGCt                             <  1:367178/135‑1 (MQ=255)                                                                                                                   agtgcctgtgagattgggcgccCAAAAACTATCGCCAGGCACCTGGAAGCCATCCTGCAATTTCCTGACGATCACCTCGCCGCCATGACGCGAACTCACAAAAACCATCACAAATCGTCTAATTCTCAGCTGGGTc                        >  7:328450‑M2/23‑136 (MQ=255)                                                                                                                      gcTCGATCTCATGGGCGCCCAAAAACTATCGCCAGGCACCTGGAAGCCATCCTGCAATTTCCTGACGATCACCTCGCCGCCATGACGCGAACTCACAAAAACCATCACAAATCGTCTAATTCTCAGCTGGGTCCt                      <  2:329283/135‑1 (MQ=255)                                                                                                                              tcATGGGCGCCCAAAAACTATCGCCAGGCACCTGGAAGCCATCCTGCAATTTCCTGACGATCACCTCGCCGCCATGACGCGAACTCACAAAAACCATCACAAATCGTCTAATTCTCAg                               <  4:71770/118‑1 (MQ=255)                                                                                                                              tcATGGGCGCCCAAAAACTATCGCCAGGCACCTGGAAGCCATCCTGCAATTTCCTGACGATCACCTCGCCGCCATGACGCGAACTCACAAAAACCATCACAAATCGTCTAATTCTCAg                               >  3:71770/1‑118 (MQ=255)                                                                                                                                aTGGGCGCCCAAAAACTATCGCCAGGCACCTGGAAGCCATCCTGCAATTTCCTGACGATCACCTCGCCGCCATGACGCGAACTCACAAAAACCATCACAAATCGTCTAATTCTCAGCTGGGTCCTACTTCCCcgcg           <  3:257518/136‑1 (MQ=255)                                                                                                                                 tgggcgccCAAAAACTATCGCCAGGCACCTGGAAGCCATCCTGCAATTTCCTGACGATCACCTCGCCGCCATGACGCGAACTCACAAAAACCATCACAAATCGTCTAATTCTCAGCTGGGTCCTACTTcc                <  5:75239‑M2/122‑1 (MQ=255)                                                                                                                                        cCAAAAACTATCGCCAGGCACCTGGAAGCCATCCTGCAATTTCCTGACGATCACCTCGCCGCCATGACGCGAACTCACAAAAACCATCACAAATCGTCTAATTCTCAGCTGGGTCCTACTTCCCCGCGAACCAttt   <  4:46915‑M2/135‑1 (MQ=255)                                                                                                                                        cCAAAAACTATCGCCAGGCACCTGGAAGCCATCCTGCAATTTCCTGACGATCACCTCGCCGCCATGACGCGAACTCACAAAAACCATCACAAATCGTCTAATTCTCAGCTGGGTCCTACTTCCCCGCGAACCAttt   <  4:24981‑M2/135‑1 (MQ=255)                                                                                                                                         cAAAAACTATCGCCAGGCACCTGTAAGCCATCCTGCAATTTCCTGACGATCACCTCGCCGCCATGACGCGAACTCACAAAAACCATCACAAATCGTCTAATTCTCAGCTGGGTCCTACTTCCCCGCGAACCAttt   <  5:241302/135‑1 (MQ=255)                                                                                                                                         cAAAAACTATCGCCAGGCACCTGGAAGCCATCCTGCAATTTCCTGACGATCACCTCGCCGCCATGACGCGAACTCACAAAAACCATCACAAATCGTCTAATTCTCAGCTGGGTCCTACTTCCCCGCGAACCAttt   <  1:51974/135‑1 (MQ=255)                                                                                                                                         cAAAAACTATCGCCAGGCACCTGGAAGCCATCCTGCAATTTCCTGACGATCACCTCGCCGCCATGACGCGAACTCACAAAAACCATCACAAATCGTCTAATTCTCAGCTGGGTCCTACTTCCCCGCGAACCATTTc  >  8:324465/1‑136 (MQ=255)                                                                                                                                         |                                                                                                                                        CGCACGCCTCGATATCGCGTCGTACAAACAAGGCGGTCGCGCGCGCCTGGCACAGGAGGGATTGGCCAGAAACAAACGTAGGAGCGGGTTTACCCGCG‑AAGCGCCGCGCGGGCGGCGCTCGATCTCATGGGCGCCCAAAAACTATCGCCAGGCACCTGGAAGCCATCCTGCAATTTCCTGACGATCACCTCGCCGCCATGACGCGAACTCACAAAAACCATCACAAATCGTCTAATTCTCAGCTGGGTCCTACTTCCCCGCGAACCATTTC  >  ACB122/5981500‑5981770

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.