Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
MC JC	NZ_CP009273	1,985,958	Δ3 bp	coding (339‑341/549 nt)	pgsA ←	CDP‑diacylglycerol‑‑glycerol‑3‑phosphate 3‑phosphatidyltransferase

Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	NZ_CP009273	1985958	1985960	3	56 [0]	[0] 54	pgsA	CDP‑diacylglycerol‑‑glycerol‑3‑phosphate 3‑phosphatidyltransferase

New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NZ_CP009273	= 1985957	0 (0.000)	54 (0.590)	51/494	1.0	100%	coding (342/549 nt)	pgsA	CDP‑diacylglycerol‑‑glycerol‑3‑phosphate 3‑phosphatidyltransferase
	?	NZ_CP009273	1985961 =	0 (0.000)					coding (338/549 nt)	pgsA	CDP‑diacylglycerol‑‑glycerol‑3‑phosphate 3‑phosphatidyltransferase

TTCACCACTTTTGATCGTTTGCTGAAAATTACGCCGAAACGATCACTGATCAAGCAAATCTGCACGCGCAGCGCTCAAATATTGCAACATTGACCACAGAGTCAGTACCGCAGCCACAAAGAAAAGTGCAATACCGGCGTACTCAACCCAAATGTTCGGACGCCACAGCAGCCATGCCAACGCCACCATCTGGGCAGTGGTTTTCACTTTCCCAATCCAGGAGACGGCCAC‑GCTACTGCGTTTACCCAACTCCGCCATCCATTCGCGTAGCGCAGAAATAATAATTTCACGGGCGATCATCGTTGCCGCCGGTAATGTCACCCACCAGCTGTGATAATGCTCGGTTACCAGCACCATGGCGATAGCCACGAGAACTTTATCTGCCACAGGGTCAAGGAAAGCACCAAACCGGGTACTCTGGTTCCAGCGGCGTGCCAGAAAACCATCGAACCAGTCAGTCACCGCCGCGACGCAGAAAATGAGCGCGGCGGCAAACG  >  NZ_CP009273/1985708‑1986204                                                                                                                                                                                                                                                           |                                                                                                                                                                                                                                                        ttCACCACTTTTGATCGTTTGCTGAAAATTACGCCGAAACGATCACTGATCAAGCAAATCTGCACGCGCAGCGCTCAAATATTGCAACATTGACCACAGAGTCAGTACCGCAGCCACAAAGAAAAGTGCAATACCGGCGTACTCAACCCAAATGTTCGGACGCCACAGCAGCCATGCCAACGCCACCATCTGGGCAGTGGTTTTCACTTTCCCAATCCAGGAGACGGCCAC‑GCTACTGCGTTTACCCAAC                                                                                                                                                                                                                                                         >  1:803961‑M1/1‑250 (MQ=255)  tCACCACTTTTGATCGTTTGCTGAAAATTACGCCGAAACGATCACTGATCAAGCAAATCTGCACGCGCAGCGCTCAAATATTGCAACATTGACCACAGAGTCAGTACCGCAGCCACAAAGAAAAGTGCAATACCGGCGTACTCAACCCAAATGTTCGGACGCCACAGCAGCCATGCCAACGCCACCATCTGGGCAGTGGTTTTCACTTTCCCAATCCAGGAGACGGCCAC‑GCTACTGCGTTTACCCAAC                                                                                                                                                                                                                                                         <  2:2209‑M1/249‑1 (MQ=255)       acTTTTGATCGTTTGCTGAAAATTACGCCGAAACGATCACTGATCAAGCAAATCTGCACGCGCAGCGCTCAAATATTGCAACATTGACCACAGAGTCAGTACCGCAGCCACAAAGAAAAGTGCAATACCGGCGTACTCAACCCAAATGTTCGGACGCCACAGCAGCCATGCCAACGCCACCATCTGGGCAGTGGTTTTCACTTTCCCAATCCAGGAGACGGCCAC‑GCTACTGCGTTTACCCAACgccatc                                                                                                                                                                                                                                                   >  2:237714‑M1/1‑244 (MQ=255)              aTCGTTGTCTGAAAATTACGCCGAAACGATCACTGATCAAGCAAATCTGCACGCGCAGCGCTCAAATATTGCAACATGGACCGCAGAGTCAGTACCGCAGCCACAAAGAAAAGTGCAATACCGGCGTACTCAACCCAAATGTTCGGACGCCACAGCAGCCATGCCAACGCCACCATCTGGGCAGTGGTTTTCACTTTCCCAATCCAGGAGACGGCCAC‑GCTACTGCGTTTACCCAACgccatccattcgc                                                                                                                                                                                                                                            <  2:117058‑M1/250‑14 (MQ=255)                 gTTTGCTGAAAATTACGCCGAAACGATCACTGATCAAGCAAATCTGCACGCGCAGCGCTCAAATATTGCAACATTGACCACAGAGTCAGTACCGCAGCCACAAAGAAAAGTGCAATACCGGCGTACTCAACCCAAATGTTCGGACGCCACAGCAGCCATGCCAACGCCACCATCTGGGCAGTGGTTTTCACTTTCCCAATCCAGGAGACGGCCAC‑GCTACTGCGTTTACCCAACgccatccattcgcgt                                                                                                                                                                                                                                          <  2:213209‑M1/249‑16 (MQ=255)                            aTTACGCCGAAACGATCACTGATCAAGCAAATCTGCACGCGCAGCGCTCAAATATTGCAACATTGACCACAGAGTCAGTACCGCAGCCACAAAGAAAAGTGCAATACCGGCGTACTCAACCCAAATGTTCGGACGCCACAGCAGCCATGCCAACGCCACCATCTGGGCAGTGGTTTTCACTTTCCCAATCCAGGAGACGGCCAC‑GCTACTGCGTTTACCCAACgccatccattcgcgtagcgcagaaata                                                                                                                                                                                                                              <  1:14546‑M1/250‑28 (MQ=255)                              tACGCCGAAACGATCACTGATCAAGCAAATCTGCACGCGCAGCGCTCAAATATTGCAACATTGACCACAGAGTCAGTACCGCAGCCACAACGAAAAGTGCAATACCGGCGTACTCAACCCAAATGTTCGGACGCCACAGCAGCCATGCCAACGCCACCATCTGGGCAGTGGTTTTCACTTTCCCAATCCAGGAGACGGCCAC‑GCTACTGCGTTTACCCAACgccatccattcgagtcgcgcaggaataa                                                                                                                                                                                                                             >  2:508539‑M1/1‑221 (MQ=255)                               aCGCCGAAACGATCACTGATCAAGCAAATCTGCACGCGCAGCGCTCAAATATTGCAACATTGACCACAGAGTCAGTACCGCAGCCACAAAGAAAAGTGCAATACCGGCGTACTCAACCCAAATGTTCGGACGCCACAGCAGCCATGCCAACGCCACCATCTGGGCAGTGGTTTTCACTTTCCCAATCCAGGAGACGGCCAC‑GCTACTGCGTTTACCCAACgccatccattcgtgtagcgcagaaataat                                                                                                                                                                                                                            >  1:146737‑M1/1‑220 (MQ=255)                                   cGAAACGATCACTGATCAAGCAAATCTGCACGCGCAGCGCTCAAATATTGCAACATTGACCACAGAGTCAGTACCGCAGCCACAAAGAAAAGTGCAATACCGGCGTACTCAACCCAAATGTTCGGACGCCACAGCAGCCATGCCAACGCCACCATCTGGGCAGTGGTTTTCACTTTCCCAATCCAGGATACGGCCAC‑GCTACTGCGTTTACCCAACgccatccattcgcgtagcgcagaaataataattt                                                                                                                                                                                                                       <  1:767571‑M1/250‑35 (MQ=255)                                      aaCGATCACTGATCAAGCAAATCTGCACGCGCAGCGCTCAAATATTGCAACATTGACCACAGAGTCAGTACCGCAGCCACAAAGAAAAGTGCAATACCGGCGTACTCAACCCAAATGTTCGGACGCCACAGCAGCCATGCCAACGCCACCATCTGGGCAGTGGTTTTCACTTTCCCAATCCAGGAGACGGCCAC‑GCTACTGCGTTTACCCAACgccatccattcgcgtagcgcagaaataataatttcac                                                                                                                                                                                                                    <  1:455282‑M1/250‑38 (MQ=255)                                       aCGATCACTGATCAAGCAAATCTGCACGCGCAGCGCTCAAATATTGCAACATTGACCACAGAGTCAGTACCGCAGCCACAAAGAAAAGTGCAATACCGGCGTACTCAACCCAAATGTTCGGACGCCACAGCAGCCATGCCAACGCCACCATCTGGGCAGTGGTTTTCACTTTCCCAATCCAGGAGACGGCCAC‑GCTACTGCGTTTACCCAACgccatccattcgcgtagcgcagaaataataatttcacg                                                                                                                                                                                                                   >  1:548023‑M1/1‑212 (MQ=255)                                         gATCACTGATCAAACAAATCTGCACGCGCAGCGCTCAAATATTGCAACATTGACCACAGAGTCAGTACCGCAGCCACAAAGAAAAGTGCAATACCGGCGTACTCAACCCAAATGTTCGGACGCCACAGCAGCCATGCCAACGCCACCATCTGGGCAGTGGTTTTCACTTTCCCAATCCAGGAGACGGCCAC‑GCTACTGCGTTTACCCAACgccatccattcgcgtagcgcagaaataataatttcacggg                                                                                                                                                                                                                 <  2:690816‑M1/250‑41 (MQ=255)                                          agacctgatCAAGCAAATCTGCACGCGCAGCGCTCAAATATTGCAACATTGCCCACAGAGTCAGTACCGCAGCCACAAATAAAAGTGCAATACCGGCGTACTCAACCCAAATGTTCGGACGCCACAGCAGCCATGCCAACGCCACCATCTGGGCAGTGGTTTTCACTTTCCCAATCCAGGAGACGGCCAC‑GCTACTGCGTTTACCCAACgccatccattcgcgtagcgcagaaataataatttcacgggc                                                                                                                                                                                                                <  2:726035‑M1/246‑42 (MQ=255)                                                    aaGCAAATCTGCACGCGCCGCGCTCAAATAGTGCAACCATGACCCCAGAGTCAGTACCGCAGCCACAAAGAAAAGTGCAATACCGGCGTTCTCAACCCAAATGTTCGGACGCCACAGCAGCCATGCCAACGCCACCATCTGGGCAGTGGTTTTCACTTTCCCAATCCAGGAGACGGCCAC‑GCTTCTGCGTTTACCCAACgccatccattcgcgtagcgcagaaataataatgtcacgggcgatcttcgtt                                                                                                                                                                                                      <  2:846689‑M1/250‑52 (MQ=255)                                                       cAAATCTGCACGCGCAGCGCTCAAATATTGCAACATTGACCACAGAGTCAGTACCGCAGCCACAAAGAAAAGTGCAATACCGGCGTACTCAACCCAAATGTTCGGACGCCACAGCAGCCATGCCAACGCCACCATCTGGGCAGTGGTTTTCACTTTCCCAATCCAGGAGACGGCCAC‑GCTACTGCGTTTACCCAACgccatccattcgcgtagcgcagaaataataatttcacgggcgatcatcgttgcc                                                                                                                                                                                                   >  2:619062‑M1/1‑196 (MQ=255)                                                          aTCTGCACGCGCAGCGCTCAAATATTGCAACATTGACCACAGAGTCAGTACCGCAGCCACAAAGAAAAGTGCAATACCGGCGTACTCAACCCAAATGTTCGGACGCCACAGCAGCCATGCCAACGCCACCATCTGGGCAGTGGTTTTCACTTTCCCAATCCAGGAGACGGCCAC‑GCTACTGCGTTTACCCAACgccatccattcgcgtagcgcagaaataataatttcacgggcgatcatcgttgccgcc                                                                                                                                                                                                >  1:230263‑M1/1‑193 (MQ=255)                                                               cACGCGCAGCGCTCAAATATTGCAACATTGACCACAGAGTCAGTACCGCAGCCACAAAGAAAAGTGCAATACCGGCGTACTCAACCCAAATGTTCGGACGCCACAGCAGCCATGCCAACGCCACCATCTGGGCAGTGGTTTTCACTTTCCCAATCCAGGAGACGGCCAC‑GCTACTGCGTTTACCCAACgccatccattcgcgtagcgcagaaataataatttcacgggcgatcatcgttgccgccggtaa                                                                                                                                                                                           >  1:150321‑M1/1‑188 (MQ=255)                                                                aCGCGCAGCGCTCAAATATTGCAACATTGACCACAGAGTCAGTACCGCAGCCACAAAGAAAAGTGCAATACCGGCGTACTCAACCCAAATGTTCGGACGCCACAGCAGCCATGCCAACGCCACCATCTGGGCAGTGGTTTTCACTTTCCCAATCCAGGAGACGGCCAC‑GCTACTGCGTTTACCCAACgccatccattcgcgtagcgcagaaataataatttcacgggcgatcatcgttgccgccggtaat                                                                                                                                                                                          >  1:108796‑M1/1‑187 (MQ=255)                                                                  gcgcAGCGCTCAAATATTGCAACATTGACCACAGAGTCAGTACCGCAGCCACAAAGAAAAGTGCAATACCGGCGTACTCAACCCAAATGTTCGGACGCCACAGCAGCCATGCCAACGCCACCATCTGGGCAGTGGTTTTCACTTTCCCAATCCAGGAGACGGCCAC‑GCTACTGCGTTTACCCAACgccatccattcgcgtagcgcagaaataataatttcacgggcgatcatcgttgccgccggtaatgt                                                                                                                                                                                        <  1:454792‑M1/250‑66 (MQ=255)                                                                   cgcAGCGCTCAAATATTGCAACATTGACCACAGAGTCAGTACCGCAGCCACAAAGAAAAGTGCAATACCGGCGTACTCAACCCAAATGTTCGGACGCCACAGCAGCCATGCCAACGCCACCATCTGGGCAGTGGTTTTCACTTTCCCAATCCAGGAGACGGCCAC‑GCTACTGCGTTTACCCAACgccatccattcgcgtagtgcagaaataataatttcacgggcgatcatcgttgccgccggtaatgtc                                                                                                                                                                                       <  1:82602‑M1/250‑67 (MQ=255)                                                                    gcAGCGCTAAAATATTAAAACATTGACCACAGGAAAAGTACCGCAGCCCCAAAAAAAAGTGCAATGCCGGCGTACTCAACCCATATGTTCGGACGCCACAGCAGCCATGCCAACGCCACCAACTAGGCAGTAGTTTTCACTTTCCCAATCCAGGAGACGGCCAC‑GCTACTGCTTTTACCCAACaccatccattcgcgtagcgcagaaaaaataatttcacaagggatcatcgttgccgcctgtaatgtca                                                                                                                                                                                      <  2:733987‑M1/250‑68 (MQ=255)                                                                                tatTGCAACATTGACCACAGAGTCAGTACCGCAGCCACAAAGAAAAGTGCAATACCGGCGTACTCAACCCAAATGTTCGGACGCCACAGCAGCCATGCCAACGCCACCATCTGGGCAGTGGTTTTCACTTTCCCAATCCAGGAGACGGCCAC‑GCTACTGCGTTTACCCAACgccatccattcgcgtagcgcagaaataataatttcacgggcgatcatcgttgccgccggtaatgtcacccaccagctgt                                                                                                                                                                          >  2:479063‑M1/1‑171 (MQ=255)                                                                                       aCATTGACCACAGAGTCAGTACCGCAGCCACAAAGAAAAGTGCAATACCGGCGTACTCAACCCAAATGTTCGGACGCCACAGCAGCCATGCCAACGCCACCATCTGGGCAGTGGTTTTCACTTTCCCAATCCAGGAGACGGCCAC‑GCTACTGCGTTTACCCAACgccatccattcgcgtagcgcagaaataataatttcacgggcgatcatcgttgccgccggtaatgtcacccaccagctgtgataatg                                                                                                                                                                   >  2:369232‑M1/1‑164 (MQ=255)                                                                                        cATTGACCACAGAGTCAGTACCGCAGCCACAAAGAAAAGTGCAATACCGGCGTACTCAACCCAAATGTTCGGACGCCACAGCAGCCATGCCAACGCCACCATCTGGGCAGTGGTTTTCACTTTCCCAATCCAGGAGACGGCCAC‑GCTACTGCGTTTACCCAACgccatccattcgcgtagcgcagaaataataatttcacgggcgatcatcgttgccgccggtaatgtcacccaccagctgtgataatgc                                                                                                                                                                  <  1:32769‑M1/250‑88 (MQ=255)                                                                                             aCCACAGAGTCAGTACCGCAGCCACAAAGAAAAGTGCAATACCGGCGTACTCAACCCAAATGTTCGGACGCCACAGCAGCCATGCCAACGCCACCATCTGGGCAGTGGTTTTCACTTTCCCAATCCAGGAGACGGCCAC‑GCTACTGCGTTTACCCAACgccatccattcgcgtagcgcagaaataataatttcacgggcgatcatcgttgccgccggtaatgtcacccaccagctgtgataatgctcggt                                                                                                                                                             >  2:309764‑M1/1‑158 (MQ=255)                                                                                                  agagTCAGTACCGCAGCCACAAAGAAAAGTGCAATACCGGCGTACTCAACCCAAATGTTCGGACGCCACAGCAGCCATGCCAACGCCACCATCTGGGCAGTGGTTTTCACTTTCCCAATCCAGGAGACGGCCAC‑GCTACTGCGTTTACCCAACgccatccattcgcgtagcgcagaaataataatttcacgggcgatcatcgttgccgccggtaatgtcacccaccagctgtgataatgctcggttac                                                                                                                                                          >  1:354836‑M1/1‑153 (MQ=255)                                                                                                    agTCAGTACCGCAGCCACAAAGAAAAGTGCAATACCGGCGTACTCAACCCAAATGTTCGGACGCCACAGCAGCCATGCCAACGCCACCATCTGGGCAGTGGTTTTCACTTTCCCAATCCAGGAGACGGCCAC‑GCTACTGCGTTTACCCAACgccatccattcgcgtagcgcagaaataataatttcacgggcgatcatcgttgccgccggtaatgtcacccaccagctgtgataatgctcggttaccag                                                                                                                                                       >  1:887485‑M1/1‑151 (MQ=255)                                                                                                      tCAGTACCGCAGCCACAAAGAAAAGTGCAATACCGGCGTACTCAACCCAAATGTTCGGACGCCACAGCAGCCATGCCAACGCCACCATCTGGGCAGTGGTTTTCACTTTCCCAATCCAGGAGACGGCCAC‑GCTACTGCGTTTACCCAACgccatccattcgcgtagcgcagaaataataatttcacgggcgatcatcgttgccgccggtaatgtcacccaccagctgtgataatgctcggttaccagcac                                                                                                                                                    >  1:88993‑M1/1‑149 (MQ=255)                                                                                                            ccGCAGCCACAAAGAAAAGTGCAATACCGGCGTACTCAACCCAAATGTTCGGACGCCACAGCAGCCATGCCAACGCCACCATCTGGGCAGTGGTTTTCACTTTCCCAATCCAGGAGACGGCCAC‑GCTACTGCGTTTACCCAACgccatccattcgcgtagcgcagaaataataatttcacgggcgatcatcgttgccgccggtaatgtcgcccaccagctgtgataatgctcggttaccagcaccatggc                                                                                                                                              <  1:212833‑M1/250‑108 (MQ=255)                                                                                                            ccGCAGCCACAAAGAAAAGTGCAATACCGGCGTACTCAACCCAAATGTTCGGACGCCACAGCAGCCATGCCAACGCCACCATCTGGGCAGTGGTTTTCACTTTCCCAATCCAGGAGACGGCCAC‑GCTACTGCGTTTACCCAACgccatccattcgcgtagcgcagaaataataatttcacgggcgatcatcgttgccgccggtaatgtcacccaccagctgtgataatgctcggttaccagcaccatggc                                                                                                                                              <  1:294080‑M1/250‑108 (MQ=255)                                                                                                                                              cccaaCCCAAATTGTCGGACGCCACAGCAGCCATGCCAACGCCACCATCTGGGCAGTGGTTTTCACTTTCCCAATCCAGGAGACGGCCAC‑GCTACTGCGTTTACCCAACgccatccattcgcgtagcgcagaaataataatttcacgggcgatcatcgttgccgccggtaatgtcacccaccagctgtgataatgctcggttaccagcaccatggcgatagccacgagaactttatctgccacagggtca                                                                                                            <  2:740192‑M1/248‑142 (MQ=255)                                                                                                                                                     cAAATGTTCGGACGCCACAGCAGCCATGCCAACGCCACCATCTGGGCAGTGGTTTTCACTTTCCCAATCCAGGGGACGGCCAC‑GCTACTGCGTTTACCCAACgccatccattcgcgtagcgcagaaataataatttcacgggcgatcatcgttgccgccggtaatgtcacccaccagctgtgataatgctcggttaccagcaccatggcgatagccacgagaactttatctgccacagggtcaaggaaag                                                                                                     <  2:787720‑M1/250‑149 (MQ=255)                                                                                                                                                                           gcCATGCCAACGCCACCATCTGGGCAGTGGTTTTCACTTTCCCAATCCAGGAGACGGCCAC‑GCTACTGCGTTTACCCAACgccatccattcgcgtagcgcagaaataataatttcacgggcgatcatcgttgccgccggtaatgtcacccaccagctgtgataatgctcggttaccagcaccatggcgatagccacgagaactttatctgccacagggtcaaggaaagcaccaaaccgggtactctggtt                                                                               <  2:623135‑M1/250‑171 (MQ=255)                                                                                                                                                                           gcCATGCCAACGCCACCATCTGGGCAGTGGTTTTCACTTTCCCAATCCAGGAGACGGCCAC‑GCTACTGCGTTTACCCAACgccatccattcgcgtagcgcagaaataataatttcacgggcgatcatcgttgccgccggtaatgtcacccaccagctgtgataatgctcggttaccagcaccatggcgatagccacgagaactttatctgccacagggtcaaggaaagcaccaaaccgggtactctgctt                                                                               >  2:385396‑M1/1‑80 (MQ=255)                                                                                                                                                                             cATGCCAACGCCACCATCTGGGCAGTGGTTTTCACTTTCCCAATCCAGGAGACGGCCAC‑GCTACTGCGTTTACCCAACgccatccattcgcgtagcgcagaaataataatttcacgggcgatcatcgttgccgccggtaatgtcacccaccagctgtgataatgctcggttaccagcaccatggcgatagccacgagaactttatctgccacagggtcaaggaaagcaccaaaccgggtactctggttc                                                                              >  1:659589‑M1/1‑78 (MQ=255)                                                                                                                                                                                  cAACGCCACCATCTGGGCAGTGGTTTTCACTTTCCCAATCCAGGAGACGGCCAC‑GCTACTGCGTTTACCCAACgccatccattcgcgtagcgcagaaataataatttcacgggcgatcatcgttgccgccggtaatgtcacccaccagctgtgataatgctcggttaccagcaccatggcgctagccccgagaactttatctgccacagggtcaaggaaagcaccaaaccgggtactctggcaccagcgg                                                                        >  2:159532‑M1/1‑73 (MQ=255)                                                                                                                                                                                   aaCGCCACCATCTGGGCAGTGGTTTTCACTTTCCCAATCCAGGAGACGGCCAC‑GCTACTGCGTTTACCCAACgccatccattcgcgtagcgcagaaataataatttcacgggcgatcatcgttgccgccggtaatgtcacccaccagctgtgataatgctcggttaccagcaccatggcgatagccacgagaactttatctgccacagggtcaaggaaagcaccaaaccgggtactctggttccagcggc                                                                       >  1:629696‑M1/1‑72 (MQ=255)                                                                                                                                                                                          ccaCCTGGGCAGTGGGTTGCACTTGCCCAATCCAGGAGAC‑GCCACGGCTACTGCGTTTACCCAACacaatccattcgcgtagcgcagaaataataatgtcacgggcgatcatcgttgccgccggtaatgtcacccaccagctgtgataatgctcggttaccagcaccatggcgatagccacgagaactttatctgccacagggtcaaggaaagcaccaaaccgggtactctggttccagcggcgtgccag                                                                <  2:14070‑M1/250‑186 (MQ=255)                                                                                                                                                                                            aTCTGGGCAGTGGTTTTCACTTTCCCAATCCAGGAGACGGCCAC‑GCTACTGCGTTTACCCAACgccatccattcgcgtagcgcagaaataataatttcacgggcgatcatcgttgccgccggtaatgtcacccaccagctgtgataatgctcggttaccagcaccatggcgatagccacgagaactttatctgccacagggtcaaggaaagcaccaaaccgggtactctggttccagcggcgtgccaga                                                               >  2:536812‑M1/1‑63 (MQ=255)                                                                                                                                                                                             tCTGGGCAGTGGTTTTCACTTTCCCAATCCAGGAGACGGCCAC‑GCTACTGCGTTTACCCAACgccatccattcgcgtagcgcagaaataataatttcacgggcgatcatcgttgccgccggtaatgtcacccaccagctgtgataatgctcggttaccagcaccatggcgatagccacgagaactttatctgccacagggtcaaggaaagcaccaaaccgggtactctggttccagcggcgtgccagaa                                                              >  1:876601‑M1/1‑62 (MQ=255)                                                                                                                                                                                                     gTGGTTTTCACTTTCCCAATCCAGGAGACGGCCAC‑GCTACTGCGTTTACCCAACgccatccattcgcgtagcgcagaaataataatttcacgggcgatcatcgttgccgccggtaatgtcacccaccagctgtgataatgctcggttaccagcaccatggcgatagccacgagaactttatctgccacagggtcaaggaaagcaccaaaccgggtactctggttccagcggcgtgccagaaaaccatcg                                                      >  1:507904‑M1/1‑54 (MQ=255)                                                                                                                                                                                                          tttCACTTTCCCAATCCAGGAGACGGCCAC‑GCTACTGCGTTTACCCAACgccatccattcgcgtagcgcagaaataataatttcacgggcgatcatcgttgccgccggtaatgtcacccaccagctgtgataatgctcggttaccagcaccatggcgatagccacgagaactttatctgccacagggtcaaggaaagcaccaaaccgggtactctggttccagcggcgtgccagaaaaccatcgaaccag                                                >  2:142478‑M1/1‑49 (MQ=255)                                                                                                                                                                                                           ttCACTTTCCCAATCCAGGAGACGGCCAC‑GCTACTGCGTTTACCCAACgccatccattcgcgtagcgcagaaataataatttcacgggcgatcatcgttgccgccggtaatgtcacccaccagctgtgataatgctcggttaccagcaccatggcgatagccacgagaactttatctgccacagggtcaaggaaagcaccaaaccgggtactctggttccagcggcgtgccagaaaaccatcgaaccag                                                <  1:170397‑M1/249‑202 (MQ=255)                                                                                                                                                                                                              aCTTTCCCAATCCAGGAGACGGCCAC‑GCTACTGCGTTTACCCAACgccatccattcgcgtagcgcagaaataataatttcacgggcgatcatcgttgccgccggtaatgtcacccaccagctgtgataatgctcggttaccagcaccatggcgatagccacgagaactttatctgccacagggtcaaggaaagcaccaaaccgggtactctggttccagcggcgtgccagaaaaccatcgaaccagtcag                                            >  2:550655‑M1/1‑45 (MQ=255)                                                                                                                                                                                                                  acccaAACCCGTAGACAGCCCC‑GCTACTCCGTTTACCCAACgccatccattcgcgtagcgcagaaataataatttcacgggcgatcatagttgccgcgggtaatgtcacccacaagctgtgataatgctcggttaccagcaccatggcgatagccacgagaactttatctgccacagggtcaaggaaagcaccaaaccgggtactctggttccagcggcgtgccagaaaaccatcgaaccagtcagtca                                         <  2:337653‑M1/248‑209 (MQ=255)                                                                                                                                                                                                                   cccAACTCATGAGCCGGCCCC‑GCTACTGCGTTTACCCAGCgcgttccattcgcgtagcgcagaaataataatttcacgggcgatcatcgttgccgccggtaatgtcacccaccagctgtgataatgctcggttaccagcaccatggcgatagccacgagaactttatctgccacagggtcaaggaaagcaccaaaccgggtactctggttccagcggcgtgccagaaaaccatcgaaccagtcagtcac                                        <  2:80784‑M1/249‑210 (MQ=255)                                                                                                                                                                                                                     cAATCCAGGAGACGGCCAC‑GCTACTGCGTTTACCCAACgccatccattcgcgtagcgcagaaataataatttcacgggcgatcatcgttgccgccggtaatgtcacccaccagctgtgataatgctcggttaccagcaccatggcgatagccacgagaactttatctgccacagggtcaaggaaagcaccaaaccgggtactctggttccagcggcgtgccagaaaaccatcgaaccagtcagtcaccgc                                     >  2:483469‑M1/1‑38 (MQ=255)                                                                                                                                                                                                                          cAGGAGACGGCCAC‑GCTACTGCGTTTACCCAACgccatccattcgcgtagcgcagaaataataatttcacgggcgatcatcgttgccgccggtaatgtcacccaccagctgtgataatgctcggttaccagcaccatggcgatagccacgagcactttatctgccacagggtcaaggaaagcaccaaaccgggtactctggttccagcggcgtggcagaaaaccaatgaaccagtcagtcaccaccgcga                                >  2:508708‑M1/1‑33 (MQ=255)                                                                                                                                                                                                                          cAGGAGACGGCCAC‑GCTACTGCGTTTACCCAACgccatccattcgcgtagcgcagaaataataatttcacgggcgatcatcgttgccgccggtaatgtcacccaccagctgtgataatgctcggttaccagcaccatggcgatagccacgagaactttatctgccacagggtcaaggaaagcaccaaaccgggtactctggttccagcggcgtgccagaaaaccatcgaaccagtcagtcaccgccgcga                                >  1:409334‑M1/1‑33 (MQ=255)                                                                                                                                                                                                                                       c‑GCTACTGCGTTTACCCAACgccatccattcgcgtagcgcagaaataataatttcacgggcgatcatcgttgccgccggtaatgtcacccaccagctgtgataatgctcggttaccagcaccatggcgatagccacgagaactttatctgccacagggtcaaggaaagcaccaaaccgggtactctggttccagcggcgtgccagaaaaccatcgaaccagtcagtcaccgccgcgacgcagaaaatgag                   <  1:536812‑M1/250‑231 (MQ=255)                                                                                                                                                                                                                                          cTACTGCGTTTACCCAACgccatccattcgcgtagcgcagaaataataatttcacgggcgatcatcgttgccgccggtaatgtcacccaccagctgtgataatgctcggttaccagcaccatggcgatagccacgagaactttatctgccacagggtcaaggaaagcaccaaaccgggtactctggttccagcggcgtgccagaaaaccatcgaaccagtcagtcaccgccgcgacgcagaaaatgagcg                 >  2:808405‑M1/1‑18 (MQ=255)                                                                                                                                                                                                                                               gCGTTTACCCAACgccatccattcgcgtagcgcagaaataataatttcacgggcgatcatcgttgccgccggtaatgtcacccaccagctgtgataatgctcggttaccagcaccatggcgatagccacgagaactttatctgccacagggtcaaggaaagcaccaaaccgggtactctggttccagcggcgtgccagaaaaccatcgaaccagtcagtcaccgccgcgacgcagaaaatgagcgcggcg            >  1:781378‑M1/1‑13 (MQ=255)                                                                                                                                                                                                                                                    tACCCAACgccatccattcgcgtagcgcagaaataataatttcacgggcgatcatcgttgccgccggtaatgtcacccaccagctgtgataatgctcggttaccagcaccatggcgatagccacgagaactttatctgccacagggtcaaggaaagcaccaaaccgggtactctggttccagcggcgtgccagaaaaccatcgaaccagtcagtcaccgccgcgacgcagaaaatgagcgcggcggcaaa       >  1:338835‑M1/1‑8 (MQ=255)                                                                                                                                                                                                                                                        cAACgccatccattcgcgtagcgcagaaataataatttcacgggcgatcatcgttgccgccggtaatgtcaccccccagctgtgataatgctcggttaccagcaccatggcgatagccacgagaactttatctgccacagggtcaaggaaagcaccaaaccgggtactctggttccagcggcgtgccagaaaaccatcgaaccagtcagtcaccgccgcgacgcagaaaatgagcgcggcggcaaacggc   <  1:660959‑M1/250‑247 (MQ=255)                                                                                                                                                                                                                                                        cAACgccatccattcgcgtagcgcagaaataataatttcacgggcgatcatcgttgccgccggtaatgtcacccaccagctgtgataatgctcggttaccagcaccatggcgatagccacgagaactttatctgccacagggtcaaggaaagcaccaaaccgggtactctggttccagcggcgtgccagaaaaccatcgaaccagtcagtcaccgccgcgacgcagaaaatgagcgcggcggcaaacggc   <  1:336722‑M1/250‑247 (MQ=255)                                                                                                                                                                                                                                                         aaCgccatccattcgcgtagcgcagaaataataatttcacgggcgatcatcgttgccgccggtaatgtcacccaccagctgtgataatgctcggttaccagcaccatggcgatagccacgagaactttatctgccacagggtcaaggaaagcaccaaaccgggtactctggttccagcggcgtgccagaaaaccatcgaaccagtcagtcaccgccgcgacgcagaaaatgagcgcggcggcaaacggcg  >  2:659542‑M1/1‑3 (MQ=255)                                                                                                                                                                                                                                                           |                                                                                                                                                                                                                                                        TTCACCACTTTTGATCGTTTGCTGAAAATTACGCCGAAACGATCACTGATCAAGCAAATCTGCACGCGCAGCGCTCAAATATTGCAACATTGACCACAGAGTCAGTACCGCAGCCACAAAGAAAAGTGCAATACCGGCGTACTCAACCCAAATGTTCGGACGCCACAGCAGCCATGCCAACGCCACCATCTGGGCAGTGGTTTTCACTTTCCCAATCCAGGAGACGGCCAC‑GCTACTGCGTTTACCCAACTCCGCCATCCATTCGCGTAGCGCAGAAATAATAATTTCACGGGCGATCATCGTTGCCGCCGGTAATGTCACCCACCAGCTGTGATAATGCTCGGTTACCAGCACCATGGCGATAGCCACGAGAACTTTATCTGCCACAGGGTCAAGGAAAGCACCAAACCGGGTACTCTGGTTCCAGCGGCGTGCCAGAAAACCATCGAACCAGTCAGTCACCGCCGCGACGCAGAAAATGAGCGCGGCGGCAAACG  >  NZ_CP009273/1985708‑1986204

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 19 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑