New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? CP043523 1861507 =4509 (8.610)412 (1.090)
+GAAAGGTTATAATAAACTAGACACAAAGTTAAGAGAAATCG
166/216 0.1 11.2% coding (393/681 nt) FTN78_chr1909 Mobile element protein
?CP043523 1911139 = NA (NA)intergenic (‑247/‑58) FTN78_chr1956/FTN78_chr1957 UPF0297 protein YrzL/Transposase
Rejected: Frequency below/above cutoff threshold.

Only 100 of 487 total aligned reads displayed.

AATCATTTTATTTACTGACAGAAATATCCCATTAAAAATTTCTTAGATACATGTTAATTATACGTTATTTTTTGCTTGAATTCAACCGTTTTCTCCATTAAAGTAAATAAAAGCCTTCTATTGATGTGCACCCCAAAAGTTAGACTTTTTTGGAAAGGTTATAATAAACTAGACACAAAGTTAAGAGAAATCGTGGAAAGGTTTATTATGGCAAGAAGAAAATTCGATAAACAATTTAAAAATTCTGCAGTAAAACTCATTCTTGAAGAGGGTTACTCTGTTAAAGAAGTCAGCCA  >  CP043523/1910990‑1911285
                                                                                                                                                     |                                                                                                                                                  
aaTCATTTTATTTACTGACAGAAATATCCCATTAAAAATTTCTTAGATACATGTTAATTATACGTTATTTTTTGCTTGAATTCAACCGTTTTCTCCATTAAAGTAAATAAAAGCCTTCTATTGATGTGCACCCCAAAAGTTAGACttttt                                                                                                                                                    >  1:2836074/1‑150 (MQ=255)
     ttttATTTACTGACAGAAATATCCCATTAAAAATTTCTTAGATACATGTTAATTATACGTTATTTTTTGCTTGAATTCAACCGTTTTCTCCATTAAAGTAAATAAAAGCCTTCTATTGATGTGCACCCCAAAAGTTAGACTTTTTTGGaa                                                                                                                                               <  1:3831298/150‑1 (MQ=255)
      tttatttaCTGACAGAAATATCCCATTAAAAATTTCTTAGATACATGTTAATTATACGTTATTTTTTGCTTGAATTCAACCGTTTTCTCCATTAAAGTAAATAAAAGCCTTCTATTGATGTGCACCCCAAAAGTTAGACTTTTTTGGaaa                                                                                                                                              <  1:1466854/150‑1 (MQ=255)
          tttaCTGACAGAAATATCCCATTAAAAATTTCTTAGATACATGTTAATTATACGTTATTTTTTTTTTTATTTCAACCGTTTTCTCCATTAAAGTAAATAAAAGCCTTCTATTGATGTGCACCCCAAAAGTTAGACTTTTTTGGAAAGGtt                                                                                                                                          >  2:4358870/1‑150 (MQ=255)
          tttaCTGACAGAAATATCCCATTAAAAATTTCTTAGATACATGTTAATTATACGTTATTTTTTGCTTGAATTCAACCGTTTTCTCCATTAAAGTAAATAAAAGCCTTCTATTGATGTGCACCCCAAAAGTTAGACTTTTTTGGAAAGGtt                                                                                                                                          <  2:137620/150‑1 (MQ=255)
             aCTGACAGAAATATCCCATTAAAAATTTCTTAGATACATGTTAATTATACGTTATTTTTTGCTTGAATTCAACCGTTTTCTCCATTAAAGGAAATAAAAGCCTTCTATTGATGTGCACCCCAAAAGTTAGACTTTTTTGGAAAGGTtata                                                                                                                                       <  1:918095/150‑1 (MQ=255)
               tGACAGAAATATCCCATTAAAAATTTCTTAGATACATGTTAATTATACGTTATTTTTTGCTTGAATTCAACCGTTTTCTCCATTAAAGTAAATAAAAGCCTTCTATTGATGTGCACCCCAAAAGTTAGACTTTTTTGGAAAGGTTataat                                                                                                                                     <  1:331534/150‑1 (MQ=255)
               tGACAGAAATATCCCATTAAAAATTTCTTAGATACATGTTAATTATACGTTATTTTTTGCTTGAATTCAACCGTTTTCTCCATTAAAGTAAATAAAAGCCTTCTATTGATGTGCACCCCAAAAGTTAGACTTTTTTGGAAAGGTTataat                                                                                                                                     <  1:324514/150‑1 (MQ=255)
               tGACAGAAATATCCCATTAAAAATTTCTTAGATACATGTTAATTATACGTTATTTTTTGCTTGAATTCAACCGTTTTCTCCATTAAAGTAAATAAAAGCCTTCTATTGATGTGCACCCCAAAAGTTAGACTTTTTTGGAAAGGTTataat                                                                                                                                     <  1:3063794/150‑1 (MQ=255)
                gACAGAAATATCCCATTAAAAATTTCTTAGATACATGTTAATTATACGTTATTTTTTGCTTGAATTCAACCGTTTTCTCCATTAAAGTAAATAAAAGCCTTCTATTGATGTGCACCCCAAAAGTTAGACTTTTTTGGAAAGGTTataata                                                                                                                                    <  2:489122/150‑1 (MQ=255)
                gACAGAAATATCCCATTAAAAATTTCTTAGATACATGTTAATTATACGTTATTTTTTGCTTGAATTCAACCGTTTTCTCCATTAAAGTAAATAAAAGCCTTCTATTGATGTGCACCCCAAAAGTTAGACTTTTTTGGAAAGGTTataata                                                                                                                                    <  2:2471394/150‑1 (MQ=255)
                  cAGAAATATCCCATTAAAAATTTCTTAGATACATGTTAATTATACGTTATTTTTTGCTTGAATTCAACCGTTTTCTCCATTAAAGTAAATAAAAGCCTTCTATTGATGTGCACCCCAAAAGTTAGACTTTTTTGGAAAGGTTATAATaaa                                                                                                                                  <  2:2899204/150‑1 (MQ=255)
                    gAAATATCCCATTAAAAATTTCTTAGATACATGTTAATTATACGTTATTTTTTGCTTGAATTCAACCGTTTTCTCCATTAAAGTAAATAAAAGCCTTCTATTGATGTGCACCCCAAAAGTTAGACTTTTTTGGAAAGGTTATAATAAACt                                                                                                                                <  1:4352185/150‑1 (MQ=255)
                    gAAATATCCCATTAAAAATTTCTTAGATACATGTTAATTATACGTTATTTTTTGCTTGAATTCAACCGTTTTCTCCATTAAAGTAAATAAAAGCCTTCTATTGATGTGCACCCCAAAAGTTAGACTTTTTTGGAAAGGTTATAATAAACt                                                                                                                                <  2:1173346/150‑1 (MQ=255)
                     aaaTATCCCATTAAAAATTTCTTAGATACATGTTTATTATACGTTATTCTTTGCTTGAATTCAACCGTTTTCTCCATTAAAGTAAATACAAGCCTTCTATTGATGTGCACCCCAAAAGTTAGACTTTTTTGGAAAGGTTATAATAAACTa                                                                                                                               <  2:4474590/150‑1 (MQ=255)
                     aaaTATCCCATTAAAAATTTCTTAGATACATGTTAATTATACGTTATTTTTTGCTTGAATTCAACCGTTTTCTCCATTAAAGTAAATAAAAGCCTTCTATTGATGTGCACCCCAAAAGTTAGACTTTTTTGGAAAGGTTATAATAAACTa                                                                                                                               >  1:2497592/1‑150 (MQ=255)
                            ccATTAAAAATTTCTTAGATACATGTTAATTATACGTTATTTTTTGCTTGAATTCAACCGTTTTCTCCATTAAAGTAAATAAAAGCCTTCTATTGATGTGCACCCCAAAAGTTAGACTTTTTTGGAAAGGTTATAATAAACTAGACACaa                                                                                                                        <  1:3612982/150‑1 (MQ=255)
                              aTTAAAAATTTCTTAGATACATGTTAATTATACGTTATTTTTTGCTTGAATTCAACCGTTTTCTCCATTAAAGTAAATAAAAGCCTTCTATTGATGTGCACCCCGAAAGTTAGACTTTTTTGGAAAGGTTATAATCAACTAGACACAAAg                                                                                                                      >  1:3867365/1‑150 (MQ=255)
                              aTTAAAAATTTCTTAGATACATGTTAATTATACGTTATTTTTTGCTTGAATTCAACCGTTTTCTCCATTAAAGTAAATAAAAGCCTTCTATTGATGTGCACCCCAAAAGTTAGACTTTTTTGGAAAGGTTATAATAAACTAGACACAAAg                                                                                                                      <  2:3486557/150‑1 (MQ=255)
                                tAAAAATTTCTTAGATACATGTTAATTATACGTTATTTTTTGCTTGAATTCAACCGTTTTCTCCATTAAAGTAAATAAAAGCCTTCTATTGATGTGCACCCCAAAAGTTAGACTTTTTTGGAAAGGTTATAATAAACTAGACACAAAGtt                                                                                                                    <  1:4534976/150‑1 (MQ=255)
                                tAAAAATTTCTTAGATACATGTTAATTATACGTTATTTTTTGCTTGAATTCAACCGTTTTCTCCATTAAAGTAAATAAAAGCCTTCTATTGATGTGCACCCCAAAAGTTAGACTTTTTTGGAAAGGTTATAATAAACTAGACACAAAGtt                                                                                                                    >  1:282864/1‑150 (MQ=255)
                                  aaaaTTTCTTAGATACATGTTAATTATACGTTATTTTTTGCTTGAATTCAACCGTTTTCTCCATTAAAGTAAATAAAAGCCTTCTATTGATGTGCACCCCAAAAGTTAGACTTTTTTGGAAAGGTTATAATAAACTAGACACAAAGTTaa                                                                                                                  >  1:21388/1‑150 (MQ=255)
                                  aaaaTTTCTTAGATACATGTTAATTATACGTTATTTTTTGCTTGAATTCAACCGTTTTCTCCATTAAAGTAAATAAAAGCCTTCTATTGATGTGCACCCCAAAAGTTAGACTTTTTTGGAAAGGTTATAATAAACTAGACACAAAGTTaa                                                                                                                  >  1:4109184/1‑150 (MQ=255)
                                           tAGATACATGTTAATTATACGTTATTTTTTGCTTGAATTCAACCGTTTTCTCCATTAAAGTAAATAAAAGCCTTCTATTGATGTGCACCCCAAAAGTTAGACTTTTTTGGAAAGGTTATAATAAACTAGACACAAAGTTAAGAGAAATCg                                                                                                         >  1:1702256/1‑150 (MQ=255)
                                                aCATGTTAATTATACGTTATTTTTTGCTTGAATTCAACCGTTTTCTCCATTAAAGTAAATAAAAGCCTTCTATTGATGTGCACCCCAAAAGTTAGACTTTTTTGGAAAGGTTATAATAAACTAGACACAAAGTTAAGAGAAATCGTGGaa                                                                                                    <  2:3390935/150‑1 (MQ=255)
                                                 naTGTTAATTATACGTTATTTTTTTCTTTAATTTAACCGTTTTCTCCATTAAAGTAAATAAAAGCCTTCTATTGATGTGCACCCCAAAAGTTAGACTTTTTTGGAAAGGTTATAATAAACTAGACACAAAGTTAAGAGAAATCGTGGaaa                                                                                                   >  2:3250766/2‑150 (MQ=255)
                                                  aTGTTAATTATACGTTATTTTTTGCTTGAATTCAACCGTTTTCTCCATTAAAGTAAATAAAAGCCTTCTATTGATGTGCACCCCAAAAGTTAGACTTTTTTGGAAAGGTTATAATAAACTAGACACAAAGTTAAGAGAAATCGTGGAAAg                                                                                                  >  1:3536935/1‑150 (MQ=255)
                                                    gTTAATTATACGTTATTTTTTTTTTTATTTCAACCGTTTTCTCCATTAAAGTAAATAAAAGCCTTCTATTGATGTGCACCCCAAAAGTTAGACTTTTTTGGAAAGGTTATAATAAACTAGACACAAAGTTAAGAGAAATCGTGGAAAGGt                                                                                                >  2:3807334/1‑150 (MQ=255)
                                                      tAATTATACGTTATTTTTTGCTTGAATTCAACCGTTTTCTCCATTAAAGTAAATAAAAGCCTTCTATTGATGTGCACCCCAAAAGTTAGACTTTTTTGGAAAGGTTATAATAAACTAGACACAAAGTTAAGAGAAATCGTGGAAAGGttt                                                                                              <  2:1309944/150‑1 (MQ=255)
                                                         ttATACGTTATTTTTTGCTTGAATTCAACCGTTTTCTCCATTAAAGTAAATAAAAGCCTTCTATTGATGTGCACCCCAAAAGTTAGACTTTTTTGGAAAGGTTATAATAAACTAGACACAAAGTTAAGAGAAATCGTGGAAAGGTttatt                                                                                           >  1:2574031/1‑150 (MQ=255)
                                                         ttATACGTTATTTTTTGCTTGAATTCAACCGTTTTCTCCATTAAAGTAAATAAAAGCCTTCTATTGATGTGCACCCCAAAAGTTAGACTTTTTTGGAAAGGTTATAATAAACTAGACACAAAGTTAAGAGAAATCGTGGAAAGGTttatt                                                                                           >  2:4045512/1‑150 (MQ=255)
                                                           ataCGTTATTTTTTGCTTGAATTCAACCGTTTTCTCCATTAAAGTAAATAAAAGCCTTCTATTGATGTGCACCCCAAAAGTTAGACTTTTTTGGAAAGGTTATAATAAACTAGACACAAAGTTAAGAGAAATCGTGGAAAGGTTtattat                                                                                         <  2:2606674/150‑1 (MQ=255)
                                                               gTTATTTTTTGCTTGAATTCAACCGTTTTCTCCATTAAAGTAAATAAAAGCCTTCTATTGATGTGCATCCCAAAAGTTAGACTTTTTTGGAAAGGTTATAATAAACTAGACACAAAGTTAAGAGAAATCGTGGAAAGGTTTATTATTGCa                                                                                     >  1:1729137/1‑150 (MQ=255)
                                                               gTTATTTTTTGCTTGAATTCAACCGTTTTCTCCATTAAAGTAAATAAAAGCCTTCTATTGATGTGCACCCCAAAAGTTAGACTTTTTTGGAAAGGTTATAATAAACTAGACACAAAGTTAAGAGAAATCGTGGAAAGGTTTATTATGGCa                                                                                     >  2:4216968/1‑150 (MQ=255)
                                                                 tATTTTTTGCTTGAATTCAACCGTTTTCTCCATTAAAGTAAATAAAAGCCTTCTATTGATGTGCACCCCAAAAGTTAGACTTTTTTGGAAAGGTTATAATAAACTAGACACAAAGTTAAGAGAAATCGTGGAAAGGTTTATTATGGCaag                                                                                   >  1:231712/1‑150 (MQ=255)
                                                                    tttttGCTTGAATTCAACCGTTTTCTCCATTAAAGTAAATAAAAGCCTTCTATTGATGTGCACCCCAAAAGTTAGACTTTTTTGGAAAGGTTATAATAAACTAGACACAAAGTTAAGAGAAATCGTGGAAAGGTTTATTATGGCaagaag                                                                                >  1:3749963/1‑150 (MQ=255)
                                                                    tttttGCTTGAATTCAACCGTTTTCTCCATTAAAGTAAATAAAAGCCTTCTATTGATGTGCACCCCAAAAGTTAGACTTTTTTGGAAAGGTTATAATAAACTAGACACAAAGTTAAGAGAAATCGTGGAAAGGTTTATTATGGCaagaag                                                                                >  1:1198170/1‑150 (MQ=255)
                                                                    tttttGCTTGAATTCAACCGTTTTCTCCATTAAAGTAAATAAAAGCCTTCTATTGATGTGCACCCCAAAAGTTAGACTTTTTTGGAAAGGTTATAATAAACTAGACACAAAGTTAAGAGAAATCGTGGAAAGGTTTATTATGGCaagaag                                                                                <  2:3637094/150‑1 (MQ=255)
                                                                       ttGCTTGAATTCAACCGTTTTCTCCATTAAAGTAAATAAAAGCCTTCTATTGATGTGCACCCCAAAAGTTAGACTTTTTTGGAAGGGTGATAATAAACTAGACACAAAGTTAAGAGACATCGTGGAAAGGTTTATTATGGCAAGAAGaaa                                                                             >  2:4102727/1‑150 (MQ=255)
                                                                       ttGCTTGAATTCAACCGTTTTCTCCATTAAAGTAAATAAAAGCCTTCTATTGATGTGCACCCCAAAAGTTAGACTTTTTTGGAAAGGTTATAATAAACTAGACACAAAGTTAAGAGAAATCGTGGAAAGGTTTATTATGGCAAGAAGaaa                                                                             >  1:2184214/1‑150 (MQ=255)
                                                                           ttGAATTCAACCGTTTTCTCCATTAAAGTAAATAAAAGCCTTCTATTGATGTGCACCCCAAAAGTTAGACTTTTTTGGAAAGGTTATAATAAACTAGACACAAAGTTAAGAGAAATCGTGGAAAGGTTTATTATGGCAAGAAGAAAAttn                                                                         <  2:22599/150‑2 (MQ=255)
                                                                           ttGAATTCAACCGTTTTCTCCATTAAAGTAAATAAAAGCCTTCTATTGATGTGCACCCCAAAAGTTAGACTTTTTTGGAAAGGTTATAATAAACTAGACACAAAGTTAAGAGAAATCGTGGAAAGGTTTATTATGGCAAGAAGAAAATTc                                                                         <  2:4300556/150‑1 (MQ=255)
                                                                            tGAATTCAACCGTTTTCTCCATTAAAGTAAATAAAAGCCTTCTATTGATGTGCACCCCAAAAGTTAGACTTTTTTGGAAAGGTTATAATAAACTAGACACAAAGTTAAGAGAAATCGTGGAAAGGTTTATTATGGCAAgaagaaccaccg                                                                        <  1:589667/150‑7 (MQ=255)
                                                                            tGAATTCAACCGTTTTCTCCATTAAAGTAAATAAAAGCCTTCTATTGATGTGCACCCCAAAAGTTAGACTTTTTTGGAAAGGTTATAATAAACTAGACACAAAGTTAAGAGAAATCGTGGAAAGGTTTATTATGGCAAGAAGAAAATTCg                                                                        <  1:108054/150‑1 (MQ=255)
                                                                             gAATTCAACCGTTTTCTCCATTAAAGTAAATAAAAGCCTTCTATTGATGTGCACCCCAAAAGTTAGACTTTTTTGGAAAGGTTATAATAAACTAGACACAAAGTTAAGAGAAATCGTGGAAAGGTTTATTATGGCAAGAAGAAAATTCGa                                                                       >  2:3687807/1‑150 (MQ=255)
                                                                              aaTTCAACCGTTTTCTCCATTAAAGTAAATAAAAGCCTTCTATTGATGTGCACCCCAAAAGTTAGACTTTTTTGGAAAGGTTATAATAAACTAGACACAAAGTTAAGAGAAATCGTGGAAAGGTTTATTATGGCAAGAAGAAAATTCGAt                                                                      >  1:2959445/1‑150 (MQ=255)
                                                                               aTTCAACCGTTTTCTCCATTAAAGTAAATAAAAGCCTTCTATTGATGTGCACCCCAAAAGTTAGACTTTTTTGGAAAGGTTATAATAAACTAGACACAAAGTTAAGAGAAATCGTGGAAAGGTTTATTATGGCAAGAAGAAAATTCGATa                                                                     <  1:3362481/150‑1 (MQ=255)
                                                                               aTTCAACCGTTTTCTCCATTAAAGTAAATAAAAGCCTTCTATTGATGTGCACCCCAAAAGTTAGACTTTTTTGGAAAGGTTATAATAAACTAGACACAAAGTTAAGAGAAATCGTGGAAAGGTTTATTATGGCAAGAAGAAAATTCGATa                                                                     <  1:1372468/150‑1 (MQ=255)
                                                                                ttCAACCGTTTTCTCCATTAAAGTAAATAAAAGCCTTCTATTGATGTGCACCCCAAAAGTTAGACTTTTTTGGAAAGGTTATAATAAACTAGACACAAAGTTAAGAGAAATCGTGGAAAGGTTTATTATGGCAAGAAGAAAATTCGATaa                                                                    <  1:1242603/150‑1 (MQ=255)
                                                                                  cAACCGTTTTCTCCATTAAAGTAAATAAAAGCCTTCTATTGATGTGCACCCCAAAAGTTAGACTTTTTTGGAAAGGTTATAATAAACTAGACACAAAGTTAAGAGAAATCGTGGAAAGGTTTATTATGGCAAGAAGAAAATTCGATacac                                                                  >  2:1469969/1‑150 (MQ=255)
                                                                                    aCCGTTTTCTCCATTAAAGTAAATAAAAGCCTTCTATTGATGTGCACCCCAAAAGTTAGACTTTTTTGGAAAGGTTATAATAAACTAGACACAAAGTTAAGAGAAATCGTGGAAAGGTTTATTATGGCAAGAAGAAAATTCGATAAACaa                                                                >  1:704025/1‑150 (MQ=255)
                                                                                        ttttCTCCATTAAAGTAAATAAAAGCCTTCTATTGATGTGCACCCCAAAAGTTAGACTTTTTTGGAAAGGTTATAATAAACTAGACACAAAGTTAAGAGAAATCGTGGAAAGGTTTATTATGGCAAGAAGAAAATTCGATAAACAATTTa                                                            >  1:2369613/1‑150 (MQ=255)
                                                                                         tttCTCCATTAAAGTAAATAAAAGCCTTCTATTGATGTGCACCCCAAAAGTTAGACTTTTTTGGAAAGGTTATAATAAACTAGACACAAAGTTAAGAGAAATCGTGGAAAGGTTTATTATGGCAAGAAGAAAATTCGATAAACAATTTaa                                                           <  1:3203760/150‑1 (MQ=255)
                                                                                         tttCTCCATTAAAGTAAATAAAAGCCTTCTATTGATGTGCACCCCAAAAGTTAGACTTTTTTGGAAAGGTTATAATAAACTAGACACAAAGTTAAGAGAAATCGTGGAAAGGTTTATTATGGCAAGAAGAAAATTCGATAAACAATTTaa                                                           <  1:4228111/150‑1 (MQ=255)
                                                                                            ctcCATTAAAGTAAATAAAAGCCTTCTATTGATGTGCACCCCAAAAGTTAGACTTTTTTGGAAAGGTTATAATAAACTAGACACAAAGTTAAGAGAAATCGTGGAAAGGTTTATTATGGCAAGAAGAAAATTCGATAAACAATTTaaaaa                                                        <  1:629849/150‑1 (MQ=255)
                                                                                             tcCATTAAAGTAAATAAAAGCCTTCTATTGATGTGCACCCCAAAAGTTAGACTTTTTTGGAAAGGTTATAATAAACTAGACACAAAGTTAAGAGAAATCGTGGAAAGGTTTATTATGGCAAGAAGAAAATTCGATAAACAATTTAAAAAt                                                       >  1:2439574/1‑150 (MQ=255)
                                                                                              ccATTAAAGTAAATAAAAGCCTTCTATTGATGTGCACCCCAAAAGTTAGACTTTTTTGGAAAGGTTATAATAAACTAGACACAAAGTTAAGAGAAATCGTGGAAAGGTTTATTATGGCAAGAAGAAAATTCGATAAACAATTTAAAAAtt                                                      >  2:774426/1‑150 (MQ=255)
                                                                                              ccATTAAAGTAAATAAAAGCCTTCTATTGATGTGCACCCCAAAAGTTAGACTTTTTTGGAAAGGTTATAATAAACTAGACACAAAGTTAAGAGAAATCGTGGAAAGGTTTATTATGGCAAGAAGAAAATTCGATAAACAATTTAAAAAtt                                                      >  2:3094869/1‑150 (MQ=255)
                                                                                              ccATTAAAGTAAATAAAAGCCTTCTATTGATGTGCACCCCAAAAGTTAGACTTTTTTGGAAAGGTTATAATAAACTAGACACAAAGTTAAGAGAAATCGTGGAAAGGTTTATTATGGCAAGAAGAAAATTCGATAAACAATTTAAAAAtt                                                      >  2:3733293/1‑150 (MQ=255)
                                                                                                aTTAAAGTAAATAAAAGCCTTCTATTGATGTGCACCCCAAAAGTTAGACTTTTTTGGAAAGGTTATAATAAACTAGACACAAAGTTAAGAGAAATCGTGGAAAGGTTTATTATGGCAAGAAGAAAATTCGATAAACAATTTAAAAATTCt                                                    <  1:2064024/150‑1 (MQ=255)
                                                                                                 ttAAAGTAAATAAAAGCCTTCTATTGATGTGCACCCCAAAAGTTAGACTTTTTTGGAAAGGTTATAATAAACTAGACACAAAGTTAAGAGAAATCGTGGAAAGGTTTATTATGGCAAGAAGAAAATTCGATAAACAATTTAAAAATTCTg                                                   >  2:1533964/1‑150 (MQ=255)
                                                                                                  tAAAGTAAATAAAAGCCTTCTATTGATGTGCACCCCAAAAGTTAGACTTTTTTGGAAAGGTTATAATAAACTAGACACAAAGTTAAGAGAAATCGTGGAAAGGTTTATTATGGCAAGAAGAAAATTCGATAAACAATTTAAAAATTCTGc                                                  >  1:340969/1‑150 (MQ=255)
                                                                                                  tAAAGTAAATAAAAGCCTTCTATTGATGTGCACCCCAAAAGTTAGACTTTTTTGGAAAGGTTATAATAAACTAGACACAAAGTTAAGAGAAATCGTGGAAAGGTTTATTATGGCAAGAAGAAAATTCGATAAACAATTTAAAAATTCTGc                                                  >  1:1953203/1‑150 (MQ=255)
                                                                                                   aaaGTAAATAAAAGCCTTCTATTGATGTGCACCCCAAAAGTTAGACTTTTTTGGAAAGGTTATAATAAACTAGACACAAAGTTAAGAGAAATCGTGGAAAGGTTTATTATGGCAAGAAGAAAATTCGATAAACAATTTAAAAATTCTGCa                                                 >  1:3484585/1‑150 (MQ=255)
                                                                                                     aGTAAATAAAAGCCTTCTATTGATGTGCACCCCAAAAGTTAGACTTTTTTGGAAAGGTTATAATAAACTAGACACAAAGTTAAGAGAAATCGTGGAAAGGTTTATTATGGCAAGAAGAAAATTCGATAAACAATTTAAAAATTCTGCAGt                                               <  2:1062395/150‑1 (MQ=255)
                                                                                                       taaataaaAGCCTTCTATTGATGTGCACCCCAAAAGTTAGACCTTTTTGGAAAGGTTATAATAAACTAGACACAAAGTTAAGAGAAATCGTGGAAAGGTTTATTATGGCAAGAAGAAAATTCGATAAACAATTTAAAAATTCTGCAGTaa                                             <  2:869045/150‑1 (MQ=255)
                                                                                                        aaataaaAGCCTTCTATTGATGTGCACCCCAAAAGTTAGACTTTTTTGGAAAGGTTATAATAAACTAGACACAAAGTTAAGAGAAATCGTGGAAAGGTTTATTATGGCAAGAAGAAAATTCGATAAACAATTTAAAAATTCTGCAGTaaa                                            >  1:441555/1‑150 (MQ=255)
                                                                                                           taaaAGCCTTCTATTGATGTGCACCCCAAAAGTTAGACTTTTTTGGAAAGGTTATAATAAACTAGACACAAAGTTAAGAGAAATCGTGGAAAGGTTTATTATGGCAAGAAGAAAATTCGATAAACAATTTAAAAATTCTGCAGTAAAACt                                         >  2:4243374/1‑150 (MQ=255)
                                                                                                            aaaaGCCTTCTATTGATGTGCACCCCAAAAGTTAGACTTTTTTGGAAAGGTTATAATAAACTAGACACAAAGTTAAGAGAAATCGTGGAAAGGTTTATTATGGCAAGAAGAAAATTCGATAAACAATTTAAAAATTCTGCAGTAAAACTc                                        <  1:2630420/150‑1 (MQ=255)
                                                                                                            aaaaGCCTTCTATTGATGTGCACCCCAAAAGTTAGACTTTTTTGGAAAGGTTATAATAAACTAGACACAAAGTTAAGAGAAATCGTGGAAAGGTTTATTATGGCAAGAAGAAAATTCGATAAACAATTTAAAAATTCTGCAGTAAAACTc                                        <  2:3047124/150‑1 (MQ=255)
                                                                                                              aaGCCTTCTATTGATGTGCACCCCAAAAGTTAGACTTTTTTGGAAAGGTTATAATAAACTAGACACAAAGTTAAGAGAAATCGTGGAAAGGTTTATTATGGCAAGAAGAAAATTCGATAAACAATTTAAAAATTCTGCAGTAAAACTCAt                                      >  1:2257030/1‑150 (MQ=255)
                                                                                                               aGCCTTCTATTGATGTGCACCCCAAAAGTTAGACTTTTTTGGAAAGGTTATAATAAACTAGACACAAAGTTAAGAGAAATCGTGGAAAGGTTTATTATGGCAAGAAGAAAATTCGATAAACAATTTAAAAATTCTGCAGTAAAACTCAtt                                     >  2:2185788/1‑150 (MQ=255)
                                                                                                               aGCCTTCTATTGATGTGCACCCCAAAAGTTAGACTTTTTTGGAAAGGTTATAATAAACTAGACACAAAGTTAAGAGAAATCGTGGAAAGGTTTATTATGGCAAGAAGAAAATTCGATAAACAATTTAAAAATTCTGCAGTAAAACTCAtt                                     <  2:280318/150‑1 (MQ=255)
                                                                                                                 ccTTCTATTGATGTGCACCCCAAAAGTTAGACTTTTTTGGAAAGGTTATAATAAACTAGACACAAAGTTAAGAGAAATCGTGGAAAGGTTTATTATGGCAAGAAGAAAATTCGATAAACAATTTAAAAATTCTGCAGTAAAACTCATTCt                                   <  1:492249/150‑1 (MQ=255)
                                                                                                                  cTTCTATTGATGTGCACCCCAAAAGTTAGACTTTTTTGGAAAGGTTATAATAAACTAGACACAAAGTTAAGAGAAATCGTGGAAAGGTTTATTATGGCAAGAAGAAAATTCGATAAACAATTTAAAAATTCTGCAGTAAAACTCATTCtt                                  >  2:646382/1‑150 (MQ=255)
                                                                                                                   ttCTATTGATGTGCACCCCAAAAGTTAGACTTTTTTGGAAAGGTTATAATAAACTAGACACAAAGTTAAGAGAAATCGTGGAAAGGTTTATTATGGCAAGAAGAAAATTCGATAAACAATTTAAAAATTCTGCAGTAAAACTCATTCTTg                                 >  2:942688/1‑150 (MQ=255)
                                                                                                                   ttCTATTGATGTGCACCCCAAAAGTTAGACTTTTTTGGAAAGGTTATAATAAACTAGACACAAAGTTAAGAGAAATCGTGGAAAGGTTTATTATGGCAAGAAGAAAATTCGATAAACAATTTAAAAATTCTGCAGTAAAACTCATTCTTg                                 <  1:1330744/150‑1 (MQ=255)
                                                                                                                    tCTATTGATGTGCACCCCAAAAGTTAGACTTTTTTGGAAAGGTTATAATAAACTAGACACAAAGTTAAGAGAAATCGTGGAAAGGTTTATTATGGCAAGAAGAAAATTCGATAAACAATTTAAAAATTCTGCAGTAAAACTCATTCTTGa                                <  2:1026201/150‑1 (MQ=255)
                                                                                                                    tCTATTGATGTGCACCCCAAAAGTTAGACTTTTTTGGAAAGGTTATAATAAACTAGACACAAAGTTAAGAGAAATCGTGGAAAGGTTTATTATGGCAAGAAGAAAATTCGATAAACAATTTAAAAATTCTGCAGTAAAACTCATTCTTGa                                <  2:4193690/150‑1 (MQ=255)
                                                                                                                     cTATTGATGTGCACCCCAAAAGTTAGACTTTTTTGGAAAGGTTATAATAAACTAGACACAAAGTTAAGAGAAATCGTGGAAAGGTTTATTATGGCAAGAAGAAAATTCGATAAACAATTTAAAAATTCTGCAGTAAAACTCATTCTTGaa                               <  2:2685641/150‑1 (MQ=255)
                                                                                                                     cTATTGATGTGCACCCCAAAAGTTAGACTTTTTTGGAAAGGTTATAATAAACTAGACACAAAGTTAAGAGAAATCGTGGAAAGGTTTATTATGGCAAGAAGAAAATTCGATAAACAATTTAAAAATTCTGCAGTAAAACTCATTCTTGaa                               >  2:263708/1‑150 (MQ=255)
                                                                                                                        ttGATGTGCACCCCAAAAGTTAGACTTTTTTGGAAAGGTTATAATAAACTAGACACAAAGTTAAGAGAAATCGTGGAAAGGTTTATTATGGCAAGAAGAAAATTCGATAAACAATTTAAAAATTCTGCAGTAAAACTCATTCTTGAagag                            >  2:18133/1‑150 (MQ=255)
                                                                                                                           aTGTGCACCCCAAAAGTTAGACTTTTTTGGAAAGGTTATAATAAACTAGACACAAAGTTAAGAGAAATCGTGGAAAGGTTTATTATGGCAAGAAGAAAATTCGATAAACAATTTAAAAATTCTGCAGTAAAACTCATTCTTGAAGAGGGt                         >  1:1630199/1‑150 (MQ=255)
                                                                                                                             gtgCACCCCAAAAGTTAGACTTTTTTGGAAAGGTTATAATAAACTAGACACAAAGTTAAGAGAAATCGTGGAAAGGTTTATTATGGCAAGAAGAAAATTCGATAAACAATTTAAAAATTCTGCAGTAAAACTCATTCTTGAAGAGGGTTa                       >  1:1915143/1‑150 (MQ=255)
                                                                                                                              tgCACCCCAAAAGTTAGACTTTTTTGGAAAGGTTATAATAAACTAGACACAAAGTTAAGAGAAATCGTGGAAAGGTTTATTATGGCAAGAAGAAAATTCGATAAACAATTTAAAAATTCTGCAGTAAAACTCATTCTTGAAGAGGGTTAc                      >  1:2735586/1‑150 (MQ=255)
                                                                                                                                  ccccAAAAGTTAGACTTTTTTGGAAAGGTTATAATAAACTAGACACAAAGTTAAGAGAAATCGTGGAAAGGTTTATTATGGCAAGAAGAAAATTCGATAAACAATTTAAAAATTCTGCAGTAAAACTCATTCTTGAAGAGGGTTACTCTg                  >  2:3578253/1‑150 (MQ=39)
                                                                                                                                    ccAAAAGTTAGACTTTTTTGGAAAGGTTATAATAAACTAGACACAAAGTTAAGAGAAATCGTGGAAAGGTTTATTATGGCAAGAAGAAAATTCGATAAACAATTTAAAAATTCTGCAGTAAAACTCATTCTTGAAGAGGGTTACTCTGtt                <  2:127597/150‑1 (MQ=37)
                                                                                                                                      aaaaGTTAGACTTTTTTGGAAAGGTTATAATAAACTAGACACAAAGTTAAGAGAAATCGTGGAAAGGTTTATTATGGCAAGAAGAAAATTCGATAAACAATTTAAAAATTCTGCAGTAAAACTCATTCTTGAAGAGGGTTACTCTGTTaa              <  2:1602150/150‑1 (MQ=38)
                                                                                                                                      aaaaGTTAGACTTTTTTGGAAAGGTTATAATAAACTAGACACAAAGTTAAGAGAAATCGTGGAAAGGTTTATTATGGCAAGAAGAAAATTCGATAAACAATTTAAAAATTCTGCAGTAAAACTCATTCTTGAAGAGGGTTACTCTGTTaa              >  1:981668/1‑150 (MQ=38)
                                                                                                                                       aaaGTTAGACTTTTTTGTTATGGTTATAATAAACTAGACACAAAGTTAAGAGAAATCGTGGAAAGGTTTATTATGGCAAGAAGAAAATTCGATAAACAATTTAAAAATTCTGCAGTAAAACTCATTCTTGAAGAGGGTTACTCTGTTaaa             >  2:2132377/1‑150 (MQ=255)
                                                                                                                                       aaaGTTAGACTTTTTTGGAAAGGTTATAATAAACTAGACACAAAGTTAAGAGAAATCGTGGAAAGGTTTATTATGGCAAGAAGAAAATTCGATAAACAATTTAAAAATTCTGCAGTAAAACTCATTCTTGAAGAGGGTTACTCTGTTaaa             >  2:123299/1‑150 (MQ=37)
                                                                                                                                       aaaGTTAGACTTTTTTGGAAAGGTTATAATAAACTAGACACAAAGTTAAGAGAAATCGTGGAAAGGTTTATTATGGCAAGAAGAAAATTCGATAAACAATTTAAAAATTCTGCAGTAAAACTCATTCTTGAAGAGGGTTACTCTGTTaaa             <  1:1009079/150‑1 (MQ=35)
                                                                                                                                       aaaGTTAGACTTTTTTGGAAAGGTTATAATAAACTAGACACAAAGTTAAGAGAAATCGTGGAAAGGTTTATTATGGCAAGAAGAAAATTCGATAAACAATTTAAAAATTCTGCAGTAAAACTCATTCTTGAAGAGGGTTACTCTGTTaaa             >  1:399723/1‑150 (MQ=37)
                                                                                                                                          gTTAGACTTTTTTGGAAAGGTTATAATAAACTAGACACAAAGTTAAGAGAAATCGTGGAAAGGTTTATTATGGCAAGAAGAAAATTCGATAAACAATTTAAAAATTCTGCAGTAAAACTCATTCTTGAAGAGGGTTACTCTGTTAaagaa          <  1:3891935/150‑1 (MQ=33)
                                                                                                                                            tAGACTTTTTTGGAAAGGTTATAATAAACTAGACACAAAGTTAAGAGAAATCGTGGAAAGGTTTATTATGGCAAGAAGAAAATTCGATAAACAATTTAAAAATTCTGCAGTAAAACTCATTCTTGAAGAGGGTTACTCTGTTAAAGAAGt        >  2:2404323/1‑150 (MQ=32)
                                                                                                                                            tAGACTTTTTTGGAAAGGTTATAATAAACTAGACACAAAGTTAAGAGAAATCGTGGAAAGGTTTATTATGGCAAGAAGAAAATTCGATAAACAATTTAAAAATTCTGCAGTAAAACTCATTCTTGAAGAGGGTTACTCTGTTAAAGAAGt        >  1:4038855/1‑150 (MQ=32)
                                                                                                                                               aCTTTTTTGGAAAGGTTATAATAAACTAGACACAAAGTTAAGAGAAATCGTGGAAAGGTTTATTATGGCAAGAAGAAAATTCGATAAACAATTTAAAAATTCTGCAGTAAAACTCATTCTTGAAGAGGGTTACTCTGTTAAAGAAGTCAg     >  1:3733609/1‑150 (MQ=32)
                                                                                                                                                 ttttttGGAAAGGTTATAATAAACTAGACACAAAGTTAAGAGAAATCGTGGAAAGGTTTATTATGGCAAGAAGAAAATTCGATAAACAATTTAAAAATTCTGCAGTAAAACTCATTCTTGAAGAGGGTTACTCTGTTAAAGAAGTCAGcc   <  2:3972941/150‑1 (MQ=31)
                                                                                                                                                  tttttGGAAAGGTTATAATAAACTAGACACAAAGTTAAGAGAAATCGTGGAAAGGTTTATTATGGCAAGAAGAAAATTCGATAAACAATTTAAAAATTCTGCAGTAAAACTCATTCTTGAAGAGGGTTACTCTGTTAAAGAAGTCAGCCa  <  1:3141200/150‑1 (MQ=11)
                                                                                                                                                  tttttGGAAAGGTTATAATAAACTAGACACAAAGTTAAGAGAAATCGTGGAAAGGTTTATTATGGCAAGAAGAAAATTCGATAAACAATTTAAAAATTCTGCAGTAAAACTCATTCTTGAAGAGGGTTACTCTGTTAAAGAAGTCAGCCa  >  1:4138080/1‑150 (MQ=11)
                                                                                                                                                     |                                                                                                                                                  
AATCATTTTATTTACTGACAGAAATATCCCATTAAAAATTTCTTAGATACATGTTAATTATACGTTATTTTTTGCTTGAATTCAACCGTTTTCTCCATTAAAGTAAATAAAAGCCTTCTATTGATGTGCACCCCAAAAGTTAGACTTTTTTGGAAAGGTTATAATAAACTAGACACAAAGTTAAGAGAAATCGTGGAAAGGTTTATTATGGCAAGAAGAAAATTCGATAAACAATTTAAAAATTCTGCAGTAAAACTCATTCTTGAAGAGGGTTACTCTGTTAAAGAAGTCAGCCA  >  CP043523/1910990‑1911285

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.