| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | CP043523 | 248261 = | 1937 (3.640) | 492 (0.930) +C |
223/292 | 0.2 | 33.7% | coding (164/576 nt) | FTN78_chr0306 | Mobile element protein |
| ? | CP043523 | = 1861974 | 14 (0.030) | coding (206/249 nt) | FTN78_chr1910 | hypothetical protein | |||||
Only 100 of 2473 total aligned reads displayed.
ATTCCTTTTAATTCCAGCCTATCATGCAGTGACTGACCTAAATATCCCATATCTCCAAGGACTGTTGGTGTCCCAAATTGACTCAGCACTTCCTCGGTCATTGAACTATCAGCCATTGAAGCAGGAGTAATTGTGTAGTCTATGACATAGCCTGATTCACTGACTAAAGCATGACATTTACATCCATAGAAGTACTGTCCCTTT‑GTAGCATTGTAGCCAACATTTGCATAATCTCCAAGAACTTTGCTTCTGAAATTACGAATAGGCTGACACAAAGGAATGGGGAAGCTGTCAA > CP043523/248114‑248408 | ttCCTTTTAATTCCAGCCTATCATGCAGTGACTGACCTAAATATCCCATATCTCCAAGGACTGTTGGTGTCCCAAATTGACTCAGCACTTCCTCGGTCATTGAACTATCAGCCATTGAAGCAGGAGTAATTGTGTAGTCTATGACATa > 1:1335796/1‑148 (MQ=32) cTTTTAATTCCAGCCTATCATGCAGTGACTGACCTAAATATCCCATATCTCCAAGGACTGTTGGTGTCCCAAATTGACTCAGCACTTCCTCGGTCATTGAACTATCAGCCATTGAAGCAGGAGTAATTGTGTAGTCTATGACATAGcc > 2:1192305/1‑148 (MQ=32) ttttAATTCCAGCCTATCATGCAGTGACTGACCTAAATATCCCATATCTCCAAGGACTGTTGGTGTCCCAAATTGACTCAGCACTTCCTCGGTCATTGAACTATCAGCCATTGAAGCAGGAGTAATTGTGTAGTCTATGACATAGCCt > 2:4607529/1‑148 (MQ=32) tttAATTCCAGCCTATCATGCAGTGACTGACCTAAATATCCCATATCTCCAAGGACTGTTGGTGTCCCAAATTGACTCAGCACTTCCTCGGTCATTGAACTATCAGCCATTGAAGCAGGAGTAATTGTGTAGTCTATGACATAGCCTg > 2:4513036/1‑148 (MQ=32) aggtagtaaccaacagcgacaataatgacgtcttttttgaattgtttgcctttaaaatgattcattactctgtcctctctgtcttttttctcaattttacactaaaatagattttttggaaaactttgcaacagaaccacgTAGCCTg < 1:262671‑M1/7‑1 (MQ=255) tCCAGCCTATCATGCAGTGACTGACCTAAATATCCCATATCTCCAAGGACTGTTGGTGTCCCAAATTGACTCAGCACTTCCTCGGTCATTGAACTATCAGCCATTGAAGCAGGAGTAATTGTGTAGTCTATGACATAGCCTGATTCAc > 2:2633298/1‑148 (MQ=32) tGCAGTGACTGACCTAAATATCCCATATCTCCAAGGACTGTTGGTGTCCCAAATTGACTCAGCACTTCCTCGGTCATTGAACTATCAGCCATTGAAGCAGGAGTAATTGTGTAGTCTATGACATAGCCTGATTCACTGACTAAAGCAt < 1:4492413/148‑1 (MQ=32) acgtcttttttgaattgtttgcctttaaaatgattcattactctgtcctctctgtcttttttctcaattttacactaaaatagattttttggaaaactttgcaacagaaccacgTAGCCTGATTCACTGACTAAAGCATGACATTTAc < 2:2737411‑M1/34‑1 (MQ=255) tCCCATATCTCCAAGGACTGTTGGTGTCCCAAATTGACTCAGCACTTCCTCGGTCATTGAACTATCAGCCATTGAAGCAGGAGTAATTGTGTAGTCTATGACATAGCCTGATTCACTGACTAAAGCATGACATTTACATCCATAGAAg < 1:2284924/148‑1 (MQ=35) attgtttgcctttaaaatgattcattactctgtcctctctgtcttttttctcaattttacactaaaatagattttttggaaaactttgcaacagaaccacgTAGCCTGATTCACTGACTAAAGCATGACATTTACATCCATAGAAGTa > 2:4086958‑M1/102‑148 (MQ=255) cAAGGACTGTTGGTGTCCCAAATTGACTCAGCACTTCCTCGGTCATTGAACTATCAGCCATTGAAGCAGGAGTAATTGTGTAGTCTATGACATAGCCTGATTCACTGACTAAAGCATGACATTTACATCCATATAAGTACTGTCCCtt > 2:2285876/1‑148 (MQ=25) atgattcattactctgtcctctctgtcttttttctcaattttacactaaaatagatttttttttttattttgcaacagaaccacgTAGCCTGATTCACTGACTAAAGCATGACATTTACATCCATAGAAGTACTGTCCCTTT‑GTAGCa < 2:700585‑M1/63‑1 (MQ=255) gTTGGTGTCCCAAATTGACTCAGCACTTCCTCGGTCATTGAACTATCAGCCATTGAAGCAGGAGTAATTGTGTAGTCTATGACATAGCCTGATTCACTGACTAAAGCATGACATTTACATCCATAGAAGTACTGTCCCTTT‑GTAGCAt < 2:848271/148‑1 (MQ=35) cAAATTGACTCAGCACTTCCTCGGTCATTGAACTATCAGCCATTGAAGCAGGAGTAATTGTGTAGTCTATGACATAGCCTGATTCACTGACTAAAGCATGACATTTACATCCATAGAAGTACTGTCCCTTT‑GTAGCATTGTAGCCAAc > 1:4122657/1‑148 (MQ=35) tcctctctgtcttttttctcaattttacactaaaatagattttttggaaaactttgcaacagaaccacgTAGCCTGATTCACTGACTAAAGCATGACATTTACATCCATAGAAGTACTGTCCCTTT‑GTAGCATTGTAGCCAACATTTg > 1:309170‑M1/70‑148 (MQ=255) agacaataCTTCCTCGGCCATTATACTGTCAGCTATTGAAGCAGGACTAATCACGTAGTCGATGACATAGCCTGATTCACTGACTAAAGCATGACATTTACAGCCATAAAAGTACTGACCTTTG‑GTAGCATTGTAGCCAATATTTGCa < 1:4002130/141‑1 (MQ=2) aCTCAGCACTTCCTCGGTCATTGAACTATCAGCCATTGAAGCAGGAGTAATTGTGTAGTCTATGACATAGCCTGATTCACTGACTAAAGCATGACATTTACATCCATAGAAGTACTGTCCCTTT‑GTAGCATTGTAGCCAACATTTGCa < 2:3674584/148‑1 (MQ=35) caacACTTCCTCGGTCATTGAACGATCAGCCATTGAAGCAGGAGTAATTGTGTAGTCTATGACATAGCCTGATTCACTGACTAAAGCATGACATTTACAGCCATAGAAGTACTGTCCCTTT‑GTAGCATTGTAGCCAACATTTGCATaa > 2:3126511/4‑148 (MQ=2) aacACTTCCTCGGTCATTGAACTATCAGCCATTGAAGCAGGAGTAATTGTGTAGTCTATGACATAGCCTGATTCACTGACTAAAGCATGACATTTACATCCATAGAAGTACTGTCCCTTT‑GTAGCATTGTAGCCAACATTTGCATAAt > 2:92346/3‑148 (MQ=14) acACTTCCTCGGTCATTGAACGATCAGCCATTGAAGCAGGAGTAATTGTGTAGTCTATGACATAGCCTGATTCACTTACTAAAGCATGACATTTACAGCCATAGAAGTACTGTCCCTTT‑GTAGCATTGTAGCCAACATTTGCATAAtc < 2:4155605/147‑1 (MQ=9) aCTTCCTCGGTCATTGAACTATCAGCCATTGAAGCAGGAGTAATTGTGTAGTCTATGACATAGCCTGATTCACTGACTAAAGCATGACATTTACATCCATAGAAGTACTGTCCCTTT‑GTAGCATTGTAGCCAACATTTGCATAAtctc < 2:2178771/148‑1 (MQ=32) aCTTCCTCGGCCATTATACTGTCAGCTATTGAAGCAGGACTAATCACGTAGTCGATGACATAGCCTGATTCACTGACTAAAGCATGACATTTACAGCCATAAAAGTACTGACCTTTG‑GTAGCATTGTAGCCAATATTTGCATagtcgc < 2:1707695/148‑6 (MQ=2) cttttttctcaattttacactaaaatagattttttggaaaactttgcaacagaaccacgTAGCCTGATTCACTGACTAAAGCATGACATTTACATCCATAGAAGTACTGTCCCTTT‑GTAGCATTGTAGCCAACATTTGCATAATCTcc < 1:1425755‑M1/89‑1 (MQ=255) cTTCCTCGGTCATTGAACTATCAGCCATTGAAGCAGGAGTAATTGTGTAGTCTATGACATAGCCTGATTCACTGACTGAAGCATGACATTTACATCCATAGAAGTACTGTCCCTTT‑GTAGCATTGTAGCCAACATTTGCATAATCTcc < 2:4408491/148‑1 (MQ=17) cTTCCTCGGTCATTGAACTATCAGCCATTGAAGCAGGAGTAATTGTGTAGTCTATGACATAGCCTGATTCACTGACTAAAGCATGACATTTACATCCCTAGAAGTACTGTCCCTTT‑GTAGCATTGTAGCCAACATTTGCATAAtctac > 1:2811866/1‑146 (MQ=17) ttCCTCGGTCATTGAACTATCAGCCATTGAAGCAGGAGTAATTGTGTAGTCTATGACATAGCCTGATTCACTGACTGAAGCATGACATTTACATCCATAGAAGTACTGTCCCTTT‑GTAGCATTGTAGCCAACATTTGCATAATCTCCa > 2:542015/1‑148 (MQ=17) ttCCTCGGTCATTGAACTATCAGCCATTGAAGCAGGAGTAATTGTGTAGTCTATGACATAGCCTGATTCACTGACTGAAGCATGACATTTACATCCATAGAAGTACTGTCCCTTT‑GTAGCATTGTAGCCAACATTTGCATAATCTCCa < 2:3275044/148‑1 (MQ=17) ttCCTCGGTCATTGAACGATCAGCCATTGAAGCAGGAGTAATTGTGTAGTCTATGACATAGCCTGATTCACTGACTAAAGCATGACATTTACAGCCATAGAAGTACTGTCCCTTT‑GTAGCATTGTAGCCAACATTTGCATAATCTCCa > 1:2711785/1‑148 (MQ=12) tttttctcaattttacactaaaatagattttttggaaaactttgcaacagaaccacgTAGCCTGATTCACTGACTAAAGCATGACATTTACATCCATAGAAGTACTGTCCCTTT‑GTAGCATTGTAGCCAACATTTGCATAATCTCCaa < 2:2350342‑M1/91‑1 (MQ=255) ccTCGGTCATTGAACGATCAGCCATTGAAGCAGGAGTAATTGTGTAGTCTATGACATAGCCTGATTCACTGACTAAAGCATGACATTTACAGCCATAGAAGTACTGTCCCTTT‑GTAGCATTGTAGCCAACATTTGCATAATCTCCAAg < 2:3807549/148‑1 (MQ=17) ttctcaattttacactaaaatagattttttggaaaactttgcaacagaaccacgTAGCCTGATTCACTGACTAAAGCATGACATTTACATCCATAGAAGTACTGTCCCTTT‑GTAGCATTGTAGCCAACATTTGCATAATCTCCAAGaa < 1:4680587‑M1/94‑1 (MQ=255) cGGTCATTGAACGATCAGCCATTGAAGCAGGAGTAATTGTGTAGTCTATGACATAGCCTGATTCACTGACTAAAGCATGACATTTACAGCCATAGAAGTACTGTCCCTTT‑GTAGCATTGTAGCCAACATTTGCATAATCTCCAAGAAc > 2:2556379/1‑148 (MQ=17) ggTCATTGAACGATCAGCCATTGAAGCAGGAGTAATTGTGTAGTCTATGACATAGCCTGATTCACTGACTAAAGCATGACATTTACAGCCATAGAAGTACTGTCCCTTT‑GTAGCATTGTAGCCAACATTTGCATAATCTCCAAGAACt < 1:2531449/148‑1 (MQ=12) tCATTGAACTATCAGCCATTGAAGCAGGAGTAATTGTGTAGTCTATGACATAGCCTGATTCACTGACTAAAGCATGACATTTACATCCATAGAAGTACTGTCCCTTT‑GTAGCATTGTAGCCAACATTTGCATAATCTCCAAGAACttt > 2:3451068/1‑148 (MQ=32) cATTGAACTATCAGCCATTGAAGCAGGAGTAATTGTGTAGTCTATGACATAGCCTGATTCATTGACTAAAGCATGACATTTACATCCATAGAAGTACTGTCCCTTT‑GTAGCATTGTAGCCAACATTTGCATAATCTCCAAGAACTTTg > 1:618507/1‑148 (MQ=17) cATTGAACTATCAGCCATTGAAGCAGGAGTAATTGTGTAGTCTATGACATAGCCTGATTCACTGACTGAAGCATGACATTTACATCCATAGAAGTACTGTCCCTTT‑GTAGCATTGTAGCCAACATTTGCATAATCTCCAAGACCTTTg > 2:1005832/1‑148 (MQ=12) cATTGAACTATCAGCCATTGAAGCAGGAGTAATTGTGTAGTCTATGACATAGCCTGATTCACTGACTAAAGCATGACATTTACATCCATAGAAGTACTGTCCCTTT‑GTAGCATTGTAGCCAACATTTGCATAATCTCCAAGAACTTTg > 1:2341037/1‑148 (MQ=32) cATTGAACGATCAGCCATTGAAGCAGGAGTAATTGTGTAGTCTATGACATAGCCTGATTCACTGACTAAAGCATGACATTTACAGCCATAGAAGTACTGTCCCTTT‑GTAGCATTGTAGCCAACATTTGCATAATCTCCAAGAACTTTg > 1:2419038/1‑148 (MQ=12) aTTGAACTATCAGCCATTGAAGCAGGAGTAATTGTGTAGTCTATGACATAGCCTGATTCACTGACTGAAGCATGACATTTACATCCATAGAAGTACTGTCCCTTT‑GTAGCATTGTAGCCAACATTTGCATAATCTCCAAGACCTTTGc > 2:2084044/1‑148 (MQ=12) aTTGAACTATCAGCCATTGAAGCAGGAGTAATTGTGTAGTCTATGACATAGCCTGATTCACTGACTGAAGCATGACATTTACATCCATAGAAGTACTGTCCCTTT‑GTAGCATTGTAGCCAACATTTGCATAATCTCCAAGACCTTTGc < 2:3382707/148‑1 (MQ=12) aTTGAACGATCAGCCATTGAAGCAGGAGTAATTGTGTAGTCTATGACATAGCCTGATTCACTGACTAAAGCATGACATTTACAGCCATAGAAGTACTGTCCCTTT‑GTAGCATTGTAGCCAACATTTGCATAATCTCCAAGAACTTTGc > 1:1708943/1‑148 (MQ=12) ttttacactaaaatagattttttgtaaaactttgcaacagcaccacgTAGCCTGATTCACTGCCTAAAGCATGACATTTACATCCATAGAAGTACTGTCCCTTT‑GTAGCATTGTAGCCAACATTTGCATAATCTCCAAGAACTTTGCt > 2:3913588‑M1/48‑148 (MQ=255) ttttacactaaaatagattttttggaaaactttgcaacagaaccacgTAGCCTGATTCACTGACTAAAGCATGACATTTACATCCATAGAAGTACTGTCCCTTT‑GTAGCATTGTAGCCAACATTTGCATAATCTCCAAGAACTTTGCt < 2:279413‑M1/101‑1 (MQ=255) ttGAACTATCAGCCATTGAAGCAGGAGTAATTGTGTAGTCTATGACATAGCCTGATTCACTGACTAAAGCATGACATTTACATCCATAGAAGTACTGTCCCTTT‑GTAGCATTGTAGCCAACATTTGCATAATCTCCAAGACCTTTGCt < 1:3155328/148‑1 (MQ=17) ttGAACGATCAGCCATTGAAGCAGGAGTAATTGTGTAGTCTATGACATAGCCTGATTCACTGACTAAAGCATGACATTTACAGCCATAGAAGTACTGTCCCTTT‑GTAGCATTGTAGCCAACATTTGCATAATCTCCAAGAACTTTGCt > 2:1098413/1‑148 (MQ=17) tatactgtCAGCTATTGAAGCAGGACTAATCACGTAGTCGATGACATAGCCTGATTCACTGACTAAAGCATGACATTTACAGCCATAAAAGTACTGACCTTTG‑GTAGCATTGTAGCCAATATTTGCATAGTCGCCCAAAACTTTGCtt < 2:2873336/141‑1 (MQ=2) tGAACTATCAGCCATTGAAGCAGGAGTAATTGTGTAGTCTATGACATAGCCTGATTCATTGACTAAAGCATGACATTTACATCCATAGAAGTACTGTCCCTTT‑GTAGCATTGTAGCCAACATTTGCATAATCTCCAAGAACTTTGCtt < 1:3936669/148‑1 (MQ=17) aacgaTCAGCCATTGAAGCAGGAGTAATTGTGTAGTCTATGACATAGCCTGATTCACTGACTAAAGCATGACATTTACAGCCATAGAAGTACTGTCCCTTT‑GTAGCATTGTAGCCAACATTTGCATAATCTCCAAGAACTTTGCTTCt > 1:1804204/5‑148 (MQ=12) aaCTATCAGCCATTGAAGCAGGAGTAATTGTGTAGTCTATGACATAGCCTGATTCATTGACTAAAGCATGACATTTACATCCATAGAAGTACTGTCCCTTT‑GTAGCATTGTAGCCAACATTTGCATAATCTCCAAGAACTTTGCTTCt < 1:54306/148‑1 (MQ=17) acgaTCAGCCATTGAAGCAGGAGTAATTGTGTAGTCTATGACATAGCCTGATTCACTGACTAAAGCATGACATTTACAGCCATAGAAGTACTGTCCCTTT‑GTAGCATTGTAGCCAACATTTGCATAATCTCCAAGAACTTTGCTTCTg > 2:473173/4‑148 (MQ=17) tgtCAGCTATTGAAGCAGGACTAATCACGTAGTCGATGACATAGCCTGATTCACTGACTAAAGCATGACATTTACAGCCATAAAAGTACTGACCTTTG‑GTAGCATTGTAGCCAATATTTGCATAGTCGCCCAAAACTTTGCTTCtaaa > 1:121959/3‑145 (MQ=2) ctaaaatagattttttggaaaactttgcaacagaaccacgTAGCCTGATTCACTGACTAAAGCATGACATTTACATCCATAGAAGTACTGTCCCTTT‑GTAGCATTGTAGCCAACATTTGCATAATCTCCAAGAACTTTGCTTCTGaaa > 2:151599‑M1/41‑148 (MQ=255) aTCAGCCATTGAAGCAGGAGTAATTGTGTAGTCTATGACATAGCCTGATTCACTGACTAAAGCATGACATTTACAGCCATAGAAGTACTGTCCCTTT‑GTAGCATTGTAGCCAACATTTGCATAATCTCCAAGAACTTTGCTTCTGaaa > 1:774340/1‑148 (MQ=17) tCAGCCATTGAAGCAGGAGTAATTGTGTAGTCTATGACATAGCCTGATTCATTGACTAAAGCATGACATTTACATCCATAGAAGTACTGTCCCTTT‑GTAGCATTGTAGCCAACATTTGCATAATCTCCAAGAACTTTGCTTCTGAAAt < 2:2471255/148‑1 (MQ=17) tCAGCCATTGAAGCAGGAGTAATTGTGTAGTCTATGACATAGCCTGATTCACTGACTAAAGCATGACATTTACAGCCATAGAAGTACTGTCCCTTT‑GTAGCATTGTAGCCAACATTTGCATAATCTCCAAGAACTTTGCTTCTGAAAt < 1:3846710/148‑1 (MQ=17) cAGCCATTGAAGCAGGAGTAATTGTGTAGTCTATGACATAGCCTGATTCATTGACTAAAGCATGACATTTACATCCATAGAAGTACTGTCCCTTTGGTAGCATTGTAGCCAATATTTGCATAGTCGCCCAAAACTTTGCTTCTAAAAt > 1:16084/1‑148 (MQ=11) cAGCCATTGAAGCAGGAGTAATTGTGTAGTCTATGACATAGCCTGATTCACTGACTGAAGCATGACATTTACATCCATAGAAGTACTGTCCCTTT‑GTAGCATTGTAGCCAACATTTGCATAATCTCCAAGACCTTTGCTTTTGAAAtt < 2:1910452/148‑1 (MQ=255) cAGCCATTGAAGCAGGAGTAATTGTGTAGTCTATGACATAGCCTGATTCACTGACTAAAGCATGACATTTACATCCATAGAAGTACTGTCCCTTT‑GTAGCATTGTAGCCAACATTTGCATAATCTCCAAGACCTTTGCTTCTGAAAtt < 1:4218533/148‑1 (MQ=17) aaaatagattttttggaaaactttgcaacagaaccacgTAGCCTGATTCACTGACTAAAGCATGACATTTACATCCATAGAAGTACTGTCCCTTT‑GTAGCATTGTAGCCAACATTTGCATAATCTCCAAGAACTTTGCTTCTGAAAtt < 1:4388641‑M1/110‑1 (MQ=255) aGCCATTGAAGCAGTAGTAATGGTGTAGTCTATGACATAGCCTGATTCACTGACTAAAGCATGACATTTACAGCCATAGAAGTACTGTCCCTTT‑GTAGCATTGTAGCCAACATTTGCATAATCTCCAAGAACTTTGCTTCTGAAATTa < 1:3671829/148‑1 (MQ=12) aGCCATTGAAGCAGGAGTAATTGTGTAGTCTATGACATAGCCTGATTCACTGACTAAAGCATGACATTTACATCCATAGAAGTACTGTCCCTTT‑GTAGCATTGTAGCCAACATTTGCATAATCTCCAAGAACTTTGCTTCTGAAATTa < 1:3494051/148‑1 (MQ=32) gCCATTGAAGCAGGAGTAATTGTGTAGTCTATGACATAGCCTGATTCACTGACTAAAGCATGACATTTACATCCATAGAAGTACTGTCCCTTT‑GTAGCATTGTAGCCAACATTTGCATAATCTCCAAGACCTTTGCTTCTGAAATTAc > 2:3725151/1‑148 (MQ=17) ccATTGAAGCAGGAGTAATTGTGTAGTCTATGACATAGCCTGATTCACTGACTAAAGCATGACATTTACATCCATAGAAGTACTGTCCCTTT‑GTAGCATTGTAGCCAACATTTGCATAATCTCCAAGACCTTTGCTTCTGAAATTACg > 1:3592237/1‑148 (MQ=17) ccATTGAAGCAGGAGTAATTGTGTAGTCTATGACATAGCCTGATTCACTGACTAAAGCATGACATTTACATCCATAGAAGTACTGTCCCTTT‑GTAGCATTGTAGCCAACATTTGCATAATCTCCAAGAACTTTGCTTCTGAAATTACg < 2:2959774/148‑1 (MQ=32) cATTGAAGCAGGAGTAATTGTGTAGTCTATGACATAGCCTGATTCACTGACTAAAGCATGACATTTACAGCCATAGAAGTACTGTCCCTTT‑GTAGCATTGTAGCCAACATTTGCATAATCTCCAAGAACTTTGCTTCTGAAATTACGa < 2:1433358/148‑1 (MQ=17) aTTGAAGCAGGAGTAATTGTGTAGTCTATGACATAGCCTGATTCACTGACTGAAGCATGACATTTACATCCATAGAAGTACTGTCCCTTT‑GTAGCATTGTAGCCAACATTTGCATAATCTCCAAGACCTTTGCTTTTGAAATTACGaa > 1:3762469/1‑148 (MQ=255) aTTGAAGCAGGAGTAATTGTGTAGTCTATGACATAGCCTGATTCACTGACTGAAGCATGACATTTACATCCATAGAAGTACTGTCCCTTT‑GTAGCATTGTAGCCAACATTTGCATAATCTCCAAGACCTTTGCTTTTGAAATTACGaa < 1:2007742/148‑1 (MQ=255) aTTGAAGCAGGAGTAATTGTGTAGTCTATGACATAGCCTGATTCACTGACTAAAGCATGACATTTACATCCATAGAAGTACTGTCCCTTT‑GTAGCATTGTAGCCAACATTTGCATAATCTCCAAGACCTTTGCTTCTGAAATTACGaa < 2:1322939/148‑1 (MQ=17) ttGAAGCAGGAGTAATTGTGTAGTCTATGACATAGCCTGATTCACTGACTAAAGCATGACATTTACAGCCATAGAAGTACTGTCCCTTT‑GTAGCATTGTAGCCAACATTTGCATAATCTCCAAGAACTTTGCTTCTGAAATTACGAAt > 2:3513043/1‑148 (MQ=17) ttGAAGCAGGAGTAATTGTGTAGTCTATGACATAGCCTGATTCACTGACTAAAGCATGACATTTACAGCCATAGAAGTACTGTCCCTTT‑GTAGCATTGTAGCCAACATTTGCATAATCTCCAAGAACTTTGCTTCTGAAATTACGAAt < 1:1062593/148‑1 (MQ=17) ttGAAGCAGGAGTAATTGTGTAGTCTATGACATAGCCTGATTCACTGACTAAAGCATGACATTTACAGCCATAGAAGTACTGTCCCTTT‑GTAGCATTGTAGCCAACATTTGCATAATCTCCAAGAACTTTGCTTCTGAAATTACGAAt > 1:2474510/1‑148 (MQ=17) gAAGCAGGAGTAATTGTGTAGTCTATGACATAGCCTGATTCACTGACTGAAGCATGACATTTACATCCATAGAAGTACTGTCCCTTT‑GTAGCATTGTAGCCAACATTTGCATAATCTCCAAGACCTTTGCTTTTGAAATTACGAATAg < 1:3217913/148‑1 (MQ=255) gAAGCAGGAGTAATTGTGTAGTCTATGACATAGCCTGATTCACTGACTAAAGCATGACATTTACATCCATAGAAGTACTGTCCCTTT‑GTAGCATTGTAGCCAACATTTGCATAATCTCCAAGACCTTTGCTTCTGAAATTACGAAtcg > 1:4288731/1‑146 (MQ=14) aaGCAGGAGTAATTGTGTAGTCTATGACATAGCCTGATTCACTGACTAAAGCATGACATTTACATCCATAGAAGTACTGTCCCTTT‑GTAGCATTGTAGCCAACATTTGCATAATCTCCAAGAACTTTGCTTCTGAAATTACGAATAgg > 2:1975430/1‑148 (MQ=35) aaGCAGGAGTAATTGTGTAGTCTATGACATAGCCTGATTCACTGACTAAAGCATGACATTTACAGCCATAGAAGTACTGTCCCTTT‑GTAGCATTGTAGCCAACATTTGCATAATCTCCAAGAACTTTGCTTCTGAAATTACGAATAgg > 2:1618315/1‑148 (MQ=25) aaGCAGGAGTAATTGTGTAGTCTATGACATAGCCTGATTCACTGACTAAAGCATGACATTTACAGCCATAGAAGTACTGTCACTTT‑GTAGCATTGTAGCCAACATTTGCATAATCTCCAAGAACTTTGCTTATGAAATTACGAATAgg > 1:113346/1‑148 (MQ=255) gCAGGAGTAATTGTGTAGTCTATGACATAGCCTGATTCACTGACTAAAGCATGACATTTACAGCCATAGAAGTACTGTCCCTTT‑GTAGCATTGTAGCCAACATTTGCATAATCTCCAAGAACTTTGCTTCTGAAATTACGAATAGGCt > 1:859314/1‑148 (MQ=37) cAGGAGTAATTGTGTAGTCTATGACATAGCCTGATTCACTGACTAAAGCATGACATTTACAGCCATAGAAGTACTGTCCCTTT‑GTAGCATTGTAGCCAACATTTGCATAATCTCCAAGAACTTTGCTTCTGAAATTACGAATAGGCTg < 1:3407030/148‑1 (MQ=38) ggAGTAATTGGGTAGTCTATGACATAGCCTGATTCACTGACTAAAGCATGACATTTACAGCCATAGAAGTACTGTCCCTTT‑GTAGCATTGTAGCCAACATTTGCATAATCTCCAAAAATTTTGCTTCTGAAATTACGAATAGGCTAac > 2:4224014/1‑148 (MQ=11) aGTAATTGTGTAGTCTATGACATAGCCTGATTCACTGACTAAAGCATGACATTTACAGCCATAGAAGTACTGTCCCTTT‑GTAGCATTGTAGCCAACATTTGCATAATCTCCAAGAACTTTGCTTCTGAAATTACGAATAGGCTGacac > 2:1797932/1‑148 (MQ=255) tAATTGTGTAGTCTATGACATAGCCTGATTCACTGACTGAAGCATGACATTTACATCCATAGAAGTACTGTCCCTTT‑GTAGCATTGTAGCCAACATTTGCATAATCTCCAAGACCTTTGCTTTTGAAATTACGAATAGGCTGACACaa > 2:3617783/1‑148 (MQ=255) aaTTGTGTAGTCTATGACATAGCCTGATTCACTGACTAAAGCATGACATTTACATCCATAGAAGTACTGTCCCTTT‑GTAGCATTGTAGCCAACATTTGCATAATCTCCAAGAACTTTGCTTCTGAAATTACGAATAGGCTGACACaaa > 1:1001324/1‑148 (MQ=39) aaTTGTGTAGTCTATGACATAGCCTGATTCACTGACTAAAGCATGACATTTACAGCCATAGAAGTACTGTCCCTTT‑GTAGCATTGTAGCCAACATTTGCATAATCTCCAAGAACTTTGCTTCTGAAATTACGAATAGGCTGACACaaa < 2:4003828/148‑1 (MQ=255) aTTGTGTAGTCTATGACATAGCCTGATTCATTGACTAAAGCATGACATTTACATCCATAGAAGTACTGTCCCTTT‑GTAGCATTGTAGCCAACATTTGCATAATCTCCAAGAACTTTGCTTCTGAAATTACGAATAGGCTGACACAAAg < 2:4303685/148‑1 (MQ=37) tgtgTAGTCTATGACATAGCCTGATTCACTGACTAAAGCATGACATTTACAGCCATAGAAGTACTGTCCCTTT‑GTAGCATTGTAGCCAACATTTGCATAATCTCCAAGAACTTTGCTTCTGAAATTACGAATAGGCTGACACAAAGGa > 2:3187720/1‑148 (MQ=255) cacgtAGTCGATGACATAGCCTGATTCACTGACTAAAGCATGACATTTACAGCCATAAAAGTACTGACCTTTG‑GTAGCATTGTAGCCAATATTTGCATAGTCGCCCAAAACTTTGCTTCTAAAATTACGAATCGGCTGACACAAAGGa < 1:1527324/145‑1 (MQ=11) gtAGTCTATGACATAGCCTGATTCACTGACTAAAGCATGACATTTACATCCATAGAAGTACTGTCCCTTT‑GTAGCATTGTAGCCAACATTTGCATAATCTCCAAGACCTTTGCTTCTGAAATTACGAATCGGCTGACACAAAGGAATg > 2:1266495/1‑148 (MQ=12) tAGTCTATGACATAGCCTGATTCACTGACTAAAGCATGACATTTACAGCCATAGAAGTACTGTCCCTTT‑GTAGCATTGTAGCCAACATTTGCATAATCTCCAAGAACTTTGCTTCTGAAATTACGAATAGGCTGACACAAAGGAATgg < 2:614371/148‑1 (MQ=255) aGTCGATGACATAGCCTGATTCACTGACTAAAGCATGACATTTACAGCCATAAAAGTACTGACCTTTG‑GTAGCATTGTAGCCAATATTTGCATAGTCGCCCAAAACTTTGCTTCTAAAATTACGAATCGGCTGACACAAAGGAATggg < 1:3295798/148‑1 (MQ=11) aGTCGATGACATAGCCTGATTCACTGACTAAAGCATGACATTTACAGCCATAAAAGTACTGACCTTTG‑GTAGCATTGTAGCCAATATTTGCATAGTCGCCCAAAACTTTGCTTCTAAAATTACGAATCGGCTGACACAAAGGAATggg > 1:947726/1‑148 (MQ=11) gTCTATGACATAGCCTGATTCACTGACTAAAGCATGACATTTACATCCATAGAAGTACTGTCCCTTT‑GTAGCATTGTAGCCAACATTTGCATAATCTCCAAGACCTTTGCTTCTGAAATTACGAATCGGCTGACACAAAGGAATgggg < 1:1906823/148‑1 (MQ=9) tCTATGACATAGCCTGATTCACTGACTAAAGCATGACATTTACATCCATAGAAGTACTGTCCCTTT‑GTAGCATTGTAGCCAACATTTGCATAATCTCCAAGACCTTTGCTTCTGAAATTACGAATCGGCTGACACAAAGGAATGGGGa > 1:2969842/1‑148 (MQ=12) tCTATGACATAGCCTGATTCACTGACTAAAGCATGACATTTACATCCATAGAAGTACTGTCCCTTT‑GTAGCATTGTAGCCAACATTTGCATAATCTCCAAGACCTTTGCTTCTGAAATTACGAATCGGCTGACACAAAGGAATGGGGa < 1:1268994/148‑1 (MQ=12) tATGACATAGCCTGATTCACTGACTAAAGCATGACATTTACATCCATAGAAGTACTGTCCCTTT‑GTAGCATTGTAGCCAACATTTGCATAATCTCCAAGACCTTTGCTTCTGAAATTACGAATCGGCTGACACAAAGGAATGGGGAAg < 1:705031/148‑1 (MQ=12) tGACATAGCCTGATTCATTGACTAAAGCATGACATTTACATCCATAGAAGTACTGTCCCTTT‑GTAGCATTGTAGCCAACATTTGCATAATCTCCAAGAACTTTGCTTCTGAAATTACGAATAGGCTGACACAAAGGAAGGGGGAAGCt > 2:766480/1‑148 (MQ=255) aCATAGCCTGATTCACTGACTGAAGCATGACATTTACATCCATAGAAGTACTGTCCCTTT‑GTAGCATTGTAGCCAACATTTGCATAATCTCCAAGACCTTTGCTTTTGAAATTACGAATAGGCTGACACAAAGGAATGGGGAAGCTGt < 1:2886293/148‑1 (MQ=255) aCATAGCCTGATTCACTGACTAAAGCATGACATTTACAGCCATAAAAGTACTGACCTTTG‑GTAGCATTGTAGCCAATATTTGCATAGTCGCCCAAAACTTTGCTTCTAAAATTACGAATCGGCTGACACAAAGGAATGGGAAAGCTGt > 1:2092700/1‑148 (MQ=11) gTAGCCTGATTCACTGACTAAAGCATGACATTTACATCCATAGAAGTACTGTCCCTTT‑GTAGCATTGTAGCCAACATTTGCATAATCTCCAAGAACTTTGCTTCTGAAATTACGAATAGGCTGACACAAAGGAATGGGGAAGCTGTCa > 1:2197371‑M1/2‑148 (MQ=255) aTAGCCTGATTCACTGACTAAAGCATGACATTTACAGCCATAGAAGTACTGTCCCTTT‑GTAGCATTGTAGCCAACATTTGCATAATCTCCAAGAACTTTGCTTCTGAAATTACGAATAGGCTGACACAAAGGAATGGGGAAGCTGTCa < 1:4578462/148‑1 (MQ=255) aTAGCCTGATTCACTGACTAAAGCATGACATTTACAGCCATAGAAGTACTGTCCCTTT‑GTAGCATTGTAGCCAACATTTGCATAATCTCCAAGAACTTTGCTTCTGAAATTACGAATAGGCTGACACAAAGGAATGGGGAAGCTGTCa > 2:3011939/1‑148 (MQ=255) | ATTCCTTTTAATTCCAGCCTATCATGCAGTGACTGACCTAAATATCCCATATCTCCAAGGACTGTTGGTGTCCCAAATTGACTCAGCACTTCCTCGGTCATTGAACTATCAGCCATTGAAGCAGGAGTAATTGTGTAGTCTATGACATAGCCTGATTCACTGACTAAAGCATGACATTTACATCCATAGAAGTACTGTCCCTTT‑GTAGCATTGTAGCCAACATTTGCATAATCTCCAAGAACTTTGCTTCTGAAATTACGAATAGGCTGACACAAAGGAATGGGGAAGCTGTCAA > CP043523/248114‑248408 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |