BRESEQ :: Evidence

Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	CP043523	1885987	1890477–1890320	4334–4491	343 [335]	[331] 343	[FTN78_chr1931]–[FTN78_chr1940]	[FTN78_chr1931],FTN78_chr1932,FTN78_chr1933,FTN78_chr1934,FTN78_chr1935,FTN78_chr1936,FTN78_chr1937,FTN78_chr1938,FTN78_chr1939,[FTN78_chr1940]

Only 100 of 343 total aligned reads displayed.

ATTTAGCCATGACTTGATACCCGATAGAATATCTTAAAGTCTCTGGTTCCAGTGATTTAGCTGATTTTAACAGTAAAGAATACGCTAAAAGTATCATCTCTAATTTCAATTGAAAACCTTGAGGCGAACGACTTTTACAACGCTCAGCTCCTAGATTTGTCAAAAAAGAGAAAACTCGCTCAATCACTTTTCTACGTTTTGAAAAATTA‑G‑GGAAAAGGATTTTCTTTTGCTTCATGTTCTTCCTGACAGGTGTAATTAGATCAATTCCTTTTAATTCCAGCCTA  >  CP043523/1890342‑1890625

               gacaCCCGATAGAATATCTTAAAGTCTCTGGTTCCAGTGATTTAGCTGATTTTAACAGTAAAGAATACGCTAAAAGTATCATCTCTAATTTCAATTGAAAACCTTGAGGCGAACGACTTTTACAACGCTCAGCTCCTAGATTTGTCaa                                                                                                                             >  1:1875637/4‑148 (MQ=1)

                                                                                                 ctgtAATTTCAATTGAAAACCTTGAGGCGAACGACTTTTACAACGCTCAGCTCCTAGATTTGTCAAAAAAGAGAAAACTCGCTCAATCACTTTTCTACGTTTTGAAAAATTA‑G‑GGAAAAGGATTTTCTTTTGCTTCGTGTTCTTCCTg                                         <  2:3312993/145‑1 (MQ=1)

                                                                                                          cAATTGAAAACCTTGAGGCGAACGACTTTTACAACGCTCAGCTCCTAGATTTGTCAAAAAAGAGAAAACTCGCTCAATCACTTTTCTACGTTTTGAAAAATTA‑G‑GGAAAAGGATTTTCTTTTGCTTCGTGTTCTTCCTGACAGGTGTa                                <  2:2466113/148‑1 (MQ=11)

                                                                                                          cAATTGAAAACCTTGAGGCGAACGACTTTTACAACGCTCAGCTCCTAGATTTGTCAAAAAAGAGAAAACTCGCTCAATCACTTTTCTACGTTTTGAAAAATTA‑G‑GGAAAAGGATTTTCTTTTGCTTCGTGTTCTTCCTGACAGGTGTa                                <  1:3524957/148‑1 (MQ=11)

                                                                                                           aaTTGAAAACCTTGAGGCGAACGACTTTTACAACGCTCAGCTCCTAGATTTGTCAAAAAAGAGAAAACTCGCTCAATCACTTTTCTACGTTTTGAAAAATTA‑G‑GGAAAAGGATTTTCTTTTGCTTCGTGTTCTTCCTGACAGGTGTaa                               >  1:1234173/1‑148 (MQ=14)

                                                                                                           aaTTGAAAACCTTGAGGCGAACGACTTTTACAACGCTCAGCTCCTAGATTTGTCAAAAAAGAAAAAACTCGCTCAATCACTTTTCTACGTTTTGAAAAATTAGG‑GGAAAAGGATTTTCTTTTGCTTCATGTTCTTCCTGACAGGTGTa                                <  1:4034297/148‑1 (MQ=2)

                                                                                                           aaTTGAAAACCTTGAGGCGAACGACTTTTACAACGCTCAGCTCCTAGATTTGAAAAAAAAAAAAAAACTCGCTCAATCACTTTTCTACGTTTTGAAAAATTAGG‑GGAAAAGGATTTTCTTTTGCTTCATGTTCTTCCTGACAGGTGTa                                <  2:783974/148‑1 (MQ=11)

                                                                                                           aaTTGAAAACCCTGAGGCGAACGACTTTTACAACGCTCAGCTCCTAGATTTGTCAAAAAAGAGAAAACTCGCTCAATCACTTTTCTACGTTTTGAAAAATTA‑G‑GGAAAAGGATTTTCTTTTGCTTCATGTTCTTCCTGACAGGTGTaa                               <  1:4505111/148‑1 (MQ=14)

                                                                                                            aTTGAAAACCTTGAGGCGAACGACTTTTACAACGCTCAGCTCCTAGATTTGTCAAAAAAGAGAAAACTCGCTCAATCACTTTTCTACGTTTTGAAAAATTA‑G‑GGAAAAGGATTTTCTTTTGCTTCGTGTTCTTCCTGACAGGTGTAAt                              >  2:2495475/1‑148 (MQ=17)

                                                                                                            aTTGAAAACCCTGAGGCGAACGACTTTTACAACGCTCAGCTCCTAGATTTGTCAAAAAAGAGAAAACTCGCTCAATCACTTTTCTACGTTTTGAAAAATTA‑G‑GGAAAAGGATTTTCTTTTGCTTCATGTTCTTCCTGACAGGTGTAAt                              >  1:2049202/1‑148 (MQ=17)

                                                                                                             ttGAAAACCTTGAGGCGAACGACTTTTACAACGCTCAGCTCCTAGATTTGTCAAAAAAGAGAAAACTCGCTCAATCACTTTTCTACGTTTTGAAAAATTA‑G‑GGAAAAGGATTTTCTTTTGCTTCATGTTCTTCCTGACAGGTGTAAtt                             >  1:1668815/1‑148 (MQ=32)

                                                                                                             ttGAAAACCTTGAGGCGAACGACTTTTACAACGCTCAGCTCCTAGATTTGTCAAAAAAGAAAAAACTCGCTCAATCACTTTTCTACGTTTTGAAAAATTAGG‑GGAAAAGGATTTTCTTTTGCTTCATGTTCTTCCTGACAGGTGTAAt                              >  1:1706228/1‑148 (MQ=12)

                                                                                                             ttGAAAACCCTGAGGCGAACGACTTTTACAACGCTCAGCTCCTAGATTTGTCAAAAAAGAGAAAACTCGCTCAATCACTTTTCTACGTTTTGAAAAATTA‑G‑GGAAAAGGATTTTCTTTTGCTTCATGTTCTTCCTGACAGGTGTAAtt                             <  2:3950661/148‑1 (MQ=17)

                                                                                                              tGAAAACCTTGAGGCGAACGACTTTTACAACGCTCAGCTCCTAGATTTGTCAAAAAAGAGAAAACTCGCTCAATCACTTTTCTACGTTTTGAAAAATTA‑G‑GGAAAAGGATTTTCTTTTGCTTCGTGTTCTTCCTGACAGGTGTAATTa                            >  2:2951374/1‑148 (MQ=17)

                                                                                                              tGAAAACCTTGAGGCGAACGACTTTTACAACGCTCAGCTCCTAGATTTGTCAAAAAAGAGAAAACTCGCTCAATCACTTTTCTACGTTTTGAAAAATTA‑G‑GGAAAAGGATTTTCTTTTGCTTCGTGTTCTTCCTGACAGGTGTAATTa                            >  1:4702360/1‑148 (MQ=17)

                                                                                                              tGAAAACCTTGAGGCGAACGACTTTTACAACGCTCAGCTCCTAGATTTGTCAAAAAAGAGAAAACTCGCTCAATCACTTTTCTACGTTTTGAAAAATTA‑G‑GGAAAAGGATTTTCTTTTGCTTCGTGTTCTTCCTGACAGGTGTAATTa                            <  1:2507854/148‑1 (MQ=17)

                                                                                                              tGAAAACCTTGAGGCGAACGACTTTTACAACGCTCAGCTCCTAGATTTGTCAAAAAAGAGAAAACTCGCTCAATCACTTTTCTACGTTTTGAAAAATTA‑G‑GGAAAAGGATTTTCTTTTGCTTCGTGTTCTTCCTGACAGGTGTAATTa                            <  1:18539/148‑1 (MQ=17)

                                                                                                               gAAAACCTTGAGGCGAACGACTTTTACAACGCTCAGCTCCTAGATTTGTCAAAAAAGAGAAAACTCGCTCAATCACTTTTCTACGTTTTGAAAAATTA‑G‑GGAAAAGGATTTTCTTTTGCTTCGTGTTCTTCCTGACAGGTGTAATTAg                           >  1:1145679/1‑148 (MQ=17)

                                                                                                               gAAAACCTTGAGGCGAACGACTTTTACAACGCTCAGCTCCTAGATTTGTCAAAAAAGAAAAAACTCGCTCAATCACTTTTCTACGTTTTGAAAAATTAGG‑GGAAAAGGATTTTCTTTTGCTTCATGTTCTTCCTGACAGGTGTAATTa                            <  1:2751715/148‑1 (MQ=12)

                                                                                                               gAAAACCCTGAGGCGAACGACTTTTACAACGCTCAGCTCCTAGATTTGTCAAAAAAGAGAAAACTCGCTCAATCACTTTTCTACGTTTTGAAAAATTA‑G‑GGAAAAGGATTTTCTTTTGCTTCATGTTCTTCCTGACAGGTGTAATTAg                           <  1:234608/148‑1 (MQ=17)

                                                                                                               gAAAACCCTGAGGCGAACGACTTTTACAACGCTCAGCTCCTAGATTTGTCAAAAAAGAGAAAACTCGCTCAATCACTTTTCTACGTTTTGAAAAATTA‑G‑GGAAAAGGATTTTCTTTTGCTTCATGTTCTTCCTGACAGGTGTAATTAg                           >  1:4642101/1‑148 (MQ=17)

                                                                                                               gAAAACCCTGAGGCGAACGACTTTTACAACGCTCAGCTCCTAGATTTGTCAAAAAAGAGAAAACTCGCTCAATCACTTTTCTACGTTTTGAAAAATTA‑G‑GGAAAAGGATTTTCTTTTGCTTCATGTTCTTCCTGACAGGTGTAATTAg                           <  2:4536712/148‑1 (MQ=17)

                                                                                                                 aaaCCTTGAGGCGAACGACTTTTACAACGCTCAGCTCCTAGATTTGTCAAAAAAGAGAAAACTCGCTCAATCACTTTTCTACGTTTTGAAAAATTA‑G‑GGAAAAGGATTTTCTTTTGCTTCGTGTTCTTCCTGACAGGTGTAATTAGAt                         >  2:3039496/1‑148 (MQ=17)

                                                                                                                 aaaCCTTGAGGCGAACGACTTTTACAACGCTCAGCTCCTAGATTTGTCAAAAAAGAGAAAACTCGCTCAATCACTTTTCTACGTTTTGAAAAATTA‑G‑GGAAAAGGATTTTCTTTTGCTTCGTGTTCTTCCTGACAGGTGTAATTAGAt                         <  1:1950439/148‑1 (MQ=17)

                                                                                                                 aaaCCTTGAGGCGAACGACTTTTACAACGCTCAGCTCCTAGATTTGTCAAAAAAGAAAAAACTCGCTCAATCACTTTTCTACGTTTTGAAAAATTAGG‑GGAAAAGGATTTTCTTTTGCTTCATGTTCTTCCTGACAGGTGTAATTAGa                          <  1:4285001/148‑1 (MQ=12)

                                                                                                                  aaCCTTGAGGCGAACGACTTTTACAACGCTCAGCTCCTAGATTTGTCAAAAAAGAAAAAACTCGCTCAATCACTTTTCTACGTTTTGAAAAATTAGG‑GGAAAAGGATTTTCTTTTGCTTCATGTTCTTCCTGACAGGTGTAATTAGAt                         >  2:4493996/1‑148 (MQ=12)

                                                                                                                  aaCCTTGAGGCGAACGACTTTTACAACGCTCAGCTCCTAGATTTGTCAAAAAAGAAAAAACTCGCTCAATCACTTTTCTACGTTTTGAAAAATTAGG‑GGAAAAGGATTTTCTTTTGCTTCATGTTCTTCCTGACAGGTGTAATTAGAt                         >  2:848239/1‑148 (MQ=12)

                                                                                                                   aCCTTGAGGCGAACGACTTTTACAACGCTCAGCTCCTAGATTTGTCAAAAAAGAGAAAACTCGCTCAATCACTTTTCTACGTTTTGAAAAATTA‑G‑GGAAAAGGATTTTCTTTTGCTTCGTGTTCTTCCTGACAGGTGTAATTAGATCa                       <  2:4427588/148‑1 (MQ=17)

                                                                                                                   aCCTTGAGGCGAACGACTTTTACAACGCTCAGCTCCTAGATTTGTCAAAAAAGAAAAAACTCGCTCAATCACTTTTCTACGTTTTGAAAAATTAGG‑GGAAAAGGATTTTCTTTTGCTTCATGTTCTTCCTGACCGGTGTAATTAGATc                        >  2:2726905/1‑148 (MQ=255)

                                                                                                                    ccctGAGGCGAACGACTTTTACAACGCTCAGCTCCTAGATTTGTCAAAAAAGAGAAAACTCGCTCAATCACTTTTCTACGTTTTGAAAAATTA‑G‑GGAAAAGGATTTTCTTTTGCTTCATGTTCTTCCTGACAGGTGTAATTAGATCaa                      <  2:688141/145‑1 (MQ=17)

                                                                                                                    ccctGAGGCGAACGACTTTTACAACGCTCAGCTCCTAGATTTGTCAAAAAAGAGAAAACTCGCTCAATCACTTTTCTACGTTTTGAAAAATTA‑G‑GGAAAAGGATTTTCTTTTGCTTCATGTTCTTCCTGACAGGTGTAATTAGATCaa                      >  2:3347225/4‑148 (MQ=17)

                                                                                                                    ccTTGAGGCGAACGACTTTTACCACGCTCAGCTCCTAGATTTGTCAAAAAAGAAAAAACTCGCTCAATCACTTTTCTACGTTTTGAAAAATTAGG‑GGAAAAGGATTTTCTTTTGCTTCATGTTCTTCCTGACAGGTGTAATTAGATCa                       <  2:1758682/148‑1 (MQ=255)

                                                                                                                    ccTTGAGGCGAACGACTTTTACAACGCTCAGCTCCTAGATTTGTCAAAAAAGAGAAAACTCGCTCAATCACTTTTCTACGTTTTGAAAAATTA‑G‑GGAAAAGGATTTTCTTTTGCTTCGTGTTCTTCCTGACAGGTGTAATTAGATCaa                      >  2:2777791/1‑148 (MQ=17)

                                                                                                                    ccTTGAGGCGAACGACTTTTACAACGCTCAGCTCCTAGATTTGTCAAAAAAGAGAAAACTCGCTCAATCACTTTTCTACGTTTTGAAAAATTA‑G‑GGAAAAGGATTTTCTTTTGCTTCGTGTTCTTCCTGACAGGTGTAATTAGATCaa                      >  2:285151/1‑148 (MQ=17)

                                                                                                                    ccTTGAGGCGAACGACTTTTACAACGCTCAGCTCCTAGATTTGTCAAAAAAGAAAAAACTCGCTCAATCACTTTTCTACGTTTTGAAAAATTAGG‑GGAAAAGGATTTTCTTTTGCTTCATGTTCTTCCTGACAGGTGTAATTAGATCa                       <  1:3307561/148‑1 (MQ=12)

                                                                                                                    ccTTGAGGCGAACGACTTTTACAACGCTCAGCTCCTAGATTTGTCAAAAAAGAAAAAACTCGCTCAATCACTTTTCTACGTTTTGAAAAATTA‑GCGGAAACGGATTTTCTTTTGCTTCATGTTCTTCCTGACAGGTGTAATCAGATCa                       >  1:1380791/1‑148 (MQ=11)

                                                                                                                     cctGAGGCGAACGACTTTTACAACGCTCAGCTCCTAGATTTGTCAAAAAAGAGAAAACTCGCTCAATCACTTTTCTACGTTTTGAAAAATTA‑G‑GGAAAAGGATTTTCTTTTGCTTCATGTTCTTCCTGACAGGTGTAATTAGATCAAt                     <  2:263559/146‑1 (MQ=17)

                                                                                                                     cctGAGGCGAACGACTTTTACAACGCTCAGCTCCTAGATTTGTCAAAAAAGAGAAAACTCGCTCAATCACTTTTCTACGTTTTGAAAAATTA‑G‑GGAAAAGGATTTTCTTTTGCTTCATGTTCTTCCTGACAGGTGTAATTAGATCAAt                     >  1:289573/3‑148 (MQ=17)

                                                                                                                     cTTGAGGCGAACGACTTTTACAACGCTCAGCTCCTAGATTTGTCAAAAAAGAGAAAACTCGCTCAATCACTTTTCTACGTTTTGAAAAATTA‑G‑GGAAAAGGATTTTCTTTTGCTTCGTGTTCTTCCTGACAGGTGTAATTAGATCAAt                     >  1:3909803/1‑148 (MQ=17)

                                                                                                                     cTTGAGGCGAACGACTTTTACAACGCTCAGCTCCTAGATTTGTCAAAAAAGAGAAAACTCGCTCAATCACTTTTCTACGTTTTGAAAAATTA‑G‑GGAAAAGGATTTTCTTTTGCTTCGTGTTCTTCCTGACAGGTGTAATTAGATCAAt                     >  2:3958853/1‑148 (MQ=17)

                                                                                                                     cTTGAGGCGAACGACTTTTACAACGCTCAGCTCCTAGATTTGTCAAAAAAGAAAAAACTCGCTCAATCACTTTTCTACGTTTTGAAAAATTAGG‑GGAAAAGGATTTTCTTTTGCTTCATGTTCTTCCTGACAGGTGTAATTAGATCaa                      <  2:4110278/148‑1 (MQ=12)

                                                                                                                      ctGAGGCGAACGACTTTTACAACGCTCAGCTCCTAGATTTGTCAAAAAAGAGAAAACTCGCTCAATCACTTTTCTACGTTTTGAAAAATTA‑G‑GGAAAAGGATTTTCTTTTGCTTCATGTTCTTCCTGACAGGTGTAATTAGATCAAtt                    <  1:3610493/147‑1 (MQ=17)

                                                                                                                       tGAGGCGAACGACTTTTACAACGCTCAGCTCCTAGATTTGTCAAAAAAGAGAAAACTCGCTCAATCACTTTTCTACGTTTTGAAAAATTA‑G‑GGAAAAGGATTTTCTTTTGCTTCGTGTTCTTCCTGACAGGTGTAATTAGATCAATTc                   >  2:2428971/1‑148 (MQ=17)

                                                                                                                       tGAGGCGAACGACTTTTACAACGCTCAGCTCCTAGATTTGTCAAAAAAGAGAAAACTCGCTCAATCACTTTTCTACGTTTTGAAAAATTA‑G‑GGAAAAGGATTTTCTTTTGCTTCATGTTCTTCCTGACAGGTGTAATTAGATCAATTc                   <  1:101759/148‑1 (MQ=32)

                                                                                                                        gAGGCGAACGACTTTTACAACGCTCAGCTCCTAGATTTGTCAAAAAAGAGAAAACTCGCTCAATCACTTTTCTACGTTTTGAAAAATTA‑G‑GGAAAAGGATTTTCTTTTGCTTCGTGTTCTTCCTGACAGGTGTAATTAGATCAATTcc                  <  1:491671/148‑1 (MQ=17)

                                                                                                                        gAGGCGAACGACTTTTACAACGCTCAGCTCCTAGATTTGTCAAAAAAGAGAAAACTCGCTCAATCACTTTTCTACGTTTTGAAAAATTA‑G‑GGAAAAGGATTTTCTTTTGCTTCGTGTTCTTCCTGACAGGTGTAATTAGATCAATTcc                  >  2:3760461/1‑148 (MQ=17)

                                                                                                                        gAGGCGAACGACTTTTACAACGCTCAGCTCCTAGATTTGTCAAAAAAGAGAAAACTCGCTCAATCACTTTTCTACGTTTTGAAAAATTA‑G‑GGAAAAGGATTTTCTTTTGCTTCGTGTTCTTCCTGACAGGTGTAATTAGATCAATTcc                  <  2:2077920/148‑1 (MQ=17)

                                                                                                                        gAGGCGAACGACTTTTACAACGCTCAGCTCCTAGATTTGTCAAAAAAGAGAAAACTCGCTCAATCACTTTTCTACGTTTTGAAAAATTA‑G‑GGAAAAGGATTTTCTTTTGCTTCATGTTCTTCCTGACAGGTGTAATTAGATCAATTcc                  >  1:1519626/1‑148 (MQ=32)

                                                                                                                         aGGCGAACGACTTTTACAACGCTCAGCTCCTAGATTTGTCAAAAAAGAAAAAACTCGCTCAATCACTTTTCTACGTTTTGAAAAATTAGG‑GGAAAAGGATTTTCTTTTGCTTCATGTTCTTCCTGACAGGTGTAATTAGATCAATTcc                  >  2:3100426/1‑148 (MQ=12)

                                                                                                                         aGGCGAACGACTTTTACAACGCTCAGCTCCTAGATTTGTCAAAAAAGAAAAAACTCGCTCAATCACTTTTCTACGTTTTGAAAAATTAGG‑GGAAAAGGATTTTCTTTTGCTTCATGTTCTTCCTGACAGGTGTAATTAGATCAATTcc                  >  2:3071768/1‑148 (MQ=12)

                                                                                                                         aGGCGAACGACTTTTACAACGCTCAGCTCCTAGATTTGTCAAAAAAGAAAAAACTCGCTCAATCACTTTTCTACGTTTTGAAAAATTAGG‑GGAAAAGGATTTTCTTTTGCTTCATGTTCTTCCTGACAGGTGTAATTAGATCAATTcc                  <  2:1893923/148‑1 (MQ=12)

                                                                                                                         aGGCGAACGACTTTTACAACGCTCAGCTCCTAGAATTGTCAAAAAAGAGAAAACTCGCTCAATCACTTTTCTACGTTTTGAAAAATTA‑G‑GGAAAAGGATTTTCTTTTGCTTCGTGTTCTTCCTGACAGGTGTAATTAGATCAATTCCt                 <  2:2322804/148‑1 (MQ=17)

                                                                                                                          ggCGAACGACTTTTACAACGCTCAGCTCCTAGATTTGTCAAAAAAGAGAAAACTCGCTCAATCACTTTTCTACGTTTTGAAAAATTA‑G‑GGAAAAGGATTTTCTTTTGCTTCATGTTCTTCCTGACAGGTGTAATTAGATCAATTCCtt                <  1:3411118/148‑1 (MQ=32)

                                                                                                                          ggCGAACGACTTTTACAACGCTCAGCTCCTAGATTTGTCAAAAAAGAGAAAACTCGCTCAATCACTTTTCTACGTTTTGAAAAATTA‑G‑GGAAAAGGATTTTCTTTTGCTTCATGTTCTTCCTGACAGGTGTAATTAGATCAATTCCtt                >  2:196446/1‑148 (MQ=32)

                                                                                                                           gCGAACGACTTTTACAACGCTCAGCTCCTAGATTTGTCAAAAAAGAGAAAACTCGCTCAATCACTTTTCTACGTTTTGAAAAATTA‑G‑GGAAAAGGATTTTCTTTTGCTTCGTGTTCTTCCTGACAGGTGTAATTAGATCAATTCCttt               >  1:3668227/1‑148 (MQ=17)

                                                                                                                           gCGAACGACTTTTACAACGCTCAGCTCCTAGATTTGTCAAAAAAGAGAAAACTCGCTCAATCACTTTTCTACGTTTTGAAAAATTA‑G‑GGAAAAGGATTTTCTTTTGCTTCATGTTCTTCCTGACAGGTGTAATTAGATCAATTCCttt               <  2:2138583/148‑1 (MQ=32)

                                                                                                                           gCGAACGACTTTTACAACGCTCAGCTCCTAGATTTGTCAAAAAAGAGAAAACTCGCTCAATCACTTTTATAAGTTTTGAAAAATTA‑G‑GGAAAAGGATTTTCTTTTGCTTCGTGTTCTTCCTGACAGGTGTAATTAGATCAATTCCttt               <  2:1522545/148‑1 (MQ=12)

                                                                                                                            cGAACGACTTTTACAACGCTCAGCTCCTAGATTTGTCAAAAAAGAGAAAACTCGCTCAATCACTTTTCTACGTTTTGAAAAATTA‑G‑GGAAAAGGATTTTCTTTTGCTTCGTGTTCTTCCTGACAGGTGTAATTAGATCAATTCCtttt              <  1:4159955/148‑1 (MQ=17)

                                                                                                                            cGAACGACTTTTACAACGCTCAGCTCCTAGATTTGTCAAAAAAGAGAAAACTCGCTCAATCACTTTTCTACGTTTTGAAAAATTA‑G‑GGAAAAGGATTTTCTTTTGCTTCGTGTTCTTCCTGACAGGTGTAATTAGATCAATTCCtttt              >  2:3710382/1‑148 (MQ=17)

                                                                                                                            cGAACGACTTTTACAACGCTCAGCTCCTAGATTTGTCAAAAAAGAAAAAACTCGCTCAATCACTTTTCTACGTTTTGAAAAATTAGG‑GGAAAAGGATTTTCTTTTGCTTCATGTTCTTCCTGACAGGTGTACTTAGATCAATTCCttt               >  1:772965/1‑148 (MQ=255)

                                                                                                                             gAACGACTTTTACAACGCTCAGCTCCTAGATTTGTCAAAAAAGAGAAAACTCGCTCAATCACTTTTCTACGTTTTGAAAAATTA‑G‑GGAAAAGGATTTTCTTTTGCTTCGTGTTCTTCCTGACAGGTGTAATTAGATCAATTCCTTTTa             <  1:3989219/148‑1 (MQ=17)

                                                                                                                             gAACGACTTTTACAACGCTCAGCTCCTAGATTTGTCAAAAAAGAAAAAACTCGCTCAATCACTTTTCTACGTTTTGAAAAATTAGG‑GGAAAAGGATTTTCTTTTGCTTCATGTTCTTCCTGACAGGTGTAATTAGATCAATTCCtttt              <  2:494406/148‑1 (MQ=12)

                                                                                                                             gAACGACTTTTACAACGCTCAGCTCCTAGATTTGTCAAAAAAGAAAAAACTCGCTCAATCACTTTTCTACGTTTTGAAAAATTAGG‑GGAAAAGGATTTTCTTTTGCTTCATGTTCTTCCTGACAGGTGTAATTAGATCAATTCCtttt              >  1:1484149/1‑148 (MQ=12)

                                                                                                                             gAACGACTTTTACAACGCTCAGCTCCTAGATTTGTCAAAAAAGAAAAAACTCGCTCAATCACTTTTCTACGTTTTGAAAAATTAGG‑GGAAAAGGATTTTCTTTTGCTTCATGTTCTTCCTGACAGGTGTAATTAGATCAATTCCtttt              <  2:2242878/148‑1 (MQ=12)

                                                                                                                             gAACGACTTTTACAACGCTCAGCTCCTAGATTTGTCAAAAAAGAAAAAACTCGCTCAATCACTTTTCTACGTTTTGAAAAATTAGG‑GGAAAAGGATTTTCTTTTGCTTCATGTTCTTCCTGACAGGTGTAATTAGATCAATTCCtttt              <  2:2627134/148‑1 (MQ=12)

                                                                                                                              aaCGACTTTTACAACGCTCAGCTCCTAGATTTGTCAAAAAAGAGAAAACTCGCTCAATCACTTTTCTACGTTTTGAAAAATTA‑G‑GGAAAAGGATTTTCTTTTGCTTCGTGTTCTTCCTGACAGGTGTAATTAGATCAATTCCTTTTaa            <  1:2695477/148‑1 (MQ=17)

                                                                                                                              aaCGACTTTTACAACGCTCAGCTCCTAGATTTGTCAAAAAAGAGAAAACTCGCTCAATCACTTTTCTACGTTTTGAAAAATTA‑G‑GGAAAAGGATTTTCTTTTGCTTCGTGTTCTTCCTGACAGGTGTAATTAGATCAATTCCTTTTaa            <  1:3819655/148‑1 (MQ=17)

                                                                                                                              aaCGACTTTTACAACGCTCAGCTCCTAGATTTGTCAAAAAAGAGAAAACTCGCTCAATCACTTTTCTACGTTTTGAAAAATTA‑G‑GGAAAAGGATTTTCTTTTGCTTCGTGTTCTTCCTGACAGGTGTAATTAGATCAATTCCTTTTaa            <  2:759729/148‑1 (MQ=17)

                                                                                                                              aaCGACTTTTACAACGCTCAGCTCCTAGATTTGTCAAAAAAGAGAAAACTCGCTCAATCACTTTTCTACGTTTTGAAAAATTA‑G‑GGAAAAGGATTTTCTTTTGCTTCGTGTTCTTCCTGACAGGTGTAATTAGATCAATTCCTTTTaa            <  1:884299/148‑1 (MQ=17)

                                                                                                                              aaCGACTTTTACAACGCTCAGCTCCTAGATTTGTCAAAAAAGAGAAAACTCGCTCAATCACTTTTCTACGTTTTGAAAAATTA‑G‑GGAAAAGGATTTTCTTTTGCTTCATGTTCTTCCTGACAGGTGTAATTAGATCAATTCCTTTTaa            >  2:3555221/1‑148 (MQ=32)

                                                                                                                              aaCGACTTTTACAACGCTCAGCTCCTAGATTTGTCAAAAAAGAAAAAACTCGCTCAATCACTTTTCTACGTTTTGAAAAATTAGG‑GGAAAAGGATTTTCTTTTGCTTCATGTTCTTCCTGACAGGTGTAATTAGATCAATTCCTTTTa             <  2:4352235/148‑1 (MQ=12)

                                                                                                                               aCGACTTTTACAACGCTCAGCTCCTAGATTTGTCAAAAAAGAGAAAACTCGCTCAATCACTTTTCTACGTTTTGAAAAATTA‑G‑GGAAAAGGATTTTCTTTTGCTTCATGTTCTTCCTGACAGGTGTAATTAGATCAATTCCTTTTAAt           >  1:2728689/1‑148 (MQ=32)

                                                                                                                               aCGACTTTTACAACGCTCAGCTCCTAGATTTGTCAAAAAAGAAAAAACTCGCTCAATCACTTTTCTACGTTTTGAAAAATTAGG‑GGAAAAGGATTTTCTTTTGCTTCATGTTCTTCCTGACAGGTGTAATTAGATCAATTCCTTTTaa            >  2:4264728/1‑148 (MQ=12)

                                                                                                                                cGACTTTTACAACGCTCAGCTCCTAGATTTGTCAAAAAAGAAAAAACTCGCTCAATCACTTTTCTACGTTTTGAAAAATTAGG‑GGAAAAGGATTTTCTTTTGCTTCATGTTCTTCCTGACAGGTGTAATTAGATCAATTCCTTTTAAt           <  1:3774715/148‑1 (MQ=12)

                                                                                                                                cGACTTTTACAACGCTAAGCTCCTAGATTTGTCAAAAAAGAAAAAACTCGCTCAATCACTTTTCTACGTTTTGAAAAATTAGG‑GGAAAAGGATTTTCTTTTGCTTCATGTTCTTCCTGACAGGTGTAATTAGATCAATTCCTTTTAAt           <  1:2681231/148‑1 (MQ=255)

                                                                                                                                 gACTTTTACAACGCTCAGCTCCTAGATTTGTCAAAAAAGAGAAAACTCGCTCAATCACTTTTCTACGTTTTGAAAAATTA‑G‑GGAAAAGGATTTTCTTTTGCTTCGTGTTCTTCCTGACAGGTGTAATTAGATCAATTCCTTTTAATTc         <  1:3079757/148‑1 (MQ=17)

                                                                                                                                 gACTTTTACAACGCTCAGCTCCTAGATTTGTCAAAAAAGAGAAAACTCGCTCAATCACTTTTCTACGTTTTGAAAAATTA‑G‑GGAAAAGGATTTTCTTTTGCTTCGTGTTCTTCCTGACAGGTGTAATTAGATCAATTCCTTTTAATTc         <  1:619013/148‑1 (MQ=17)

                                                                                                                                 gACTTTTACAACGCTCAGCTCCTAGATTTGTCAAAAAAGAGAAAACTCGCTCAATCACTTTTCTACGTTTTGAAAAATTA‑G‑GGAAAAGGATTTTCTTTTGCTTCGTGTTCTTCCTGACAGGTGTAATTAGATCAATTCCTTTTAATTc         >  1:2598671/1‑148 (MQ=17)

                                                                                                                                  aCTTTTACAACGCTCAGCTCCTAGATTTGTCAAAAAAGAGAAAACTCGCTCAATCACTTTTCTACGTTTTGAAAAATTA‑G‑GGAAAAGGATTTTCTTTTGCTTCGTGTTCTTCCTGACAGGTGTAATTAGATCAATTCCTTTTAATTcc        <  1:2198605/148‑1 (MQ=17)

                                                                                                                                  aCTTTTACAACGCTCAGCTCCTAGATTTGTCAAAAAAGAGAAAACTCGCTCAATCACTTTTCTACGTTTTGAAAAATTA‑G‑GGAAAAGGATTTTCTTTTGCTTCGTGTTCTTCCTGACAGGTGTAATTAGATCAATTCCTTTTAATTcc        <  2:3253903/148‑1 (MQ=17)

                                                                                                                                  aCTTTTACAACGCTCAGCTCCTAGATTTGTCAAAAAAGAGAAAACTCGCTCAATCACTTTTCTACGTTTTGAAAAATTA‑G‑GGAAAAGGATTTTCTTTTGCTTCGTGTTCTTCCTGACAGGTGTAATTAGATCAATTCCTTTTAATTcc        <  1:2198009/148‑1 (MQ=17)

                                                                                                                                  aCTTTTACAACGCTCAGCTCCTAGATTTGTCAAAAAAGAGAAAACTCGCTCAATCACTTTTCTACGTTTTGAAAAATTA‑G‑GGAAAAGGATTTTCTTTTGCTTCGTGTTCTTCCTGACAGATGTAATTAGATCAATTCCTTTTAGTTca        >  1:1006865/1‑147 (MQ=12)

                                                                                                                                  aCTTTTACAACGCTCAGCTCCTAGATTTGTCAAAAAAGAGAAAACTCGCTCAATCACTTTTCTACGTTTTGAAAAATTA‑G‑GGAAAAGGATTTTCTTTTGCTTCATGTTCTTCCTGACAGGTGTAATTAGATCAATTCCTTTTAATTcc        <  1:3337773/148‑1 (MQ=32)

                                                                                                                                  aCTTTTACAACGCTCAGCTCCTAGATTTGTCAAAAAAGAGAAAACTCGCTCAATCACTTTTCTACGTTTTGAAAAATTA‑G‑GGAAAAGGATTTTCTTTTGCTTCATGTTCTTCCTGACAGGTGTAATTAGATCAATTCCTTTTAATTcc        <  2:137792/148‑1 (MQ=32)

                                                                                                                                   cTTTTACAACGCTCAGCTCCTAGATTTGTCAAAAAAGAGAAAACTCGCTCAATCACTTTTCTACGTTTTGAAAAATTA‑G‑GGAAAAGGATTTTCTTTTGCTTCGTGTTCTTCCTGACAGGTGTAATTAGATCAATTCCTTTTAATTCCa       >  2:2538121/1‑148 (MQ=17)

                                                                                                                                   cTTTTACAACGCTCAGCTCCTAGATTTGTCAAAAAAGAGAAAACTCGCTCAATCACTTTTCTACGTTTTGAAAAATTA‑G‑GGAAAAGGATTTTCTTTTGCTTCGTGTTCTTCCTGACAGGTGTAATTAGATCAATTCCTTTTAATTCCa       <  1:2148124/148‑1 (MQ=17)

                                                                                                                                   cTTTTACAACGCTCAGCTCCTAGATTTGTCAAAAAAGAGAAAACTCGCTCAATCACTTTTCTACGTTTTGAAAAATTA‑G‑GGAAAAGGATTTTCTTTTGCTTCATGTTCTTCCTGACAGGTGTAATTAGATCAATTCCTTTTAATTCCa       >  1:3208724/1‑148 (MQ=32)

                                                                                                                                   cTTTTACAACGCTCAGCTCCTAGATTTGTCAAAAAAGAGAAAACTCGCTCAATCACTTTTCTACGTTTTGAAAAATTA‑G‑GGAAAAGGATTTTCTTTTGCTTCATGTTCTTCCTGACAGGTGTAATTAGATCAATTCCTTTTAATTCCa       <  2:2258316/148‑1 (MQ=32)

                                                                                                                                   cTTTTACAACGCTCAGCTCCTAGATTTGTCAAAAAAGAAAAAACTCGCTCAATCACTTTTCTACGTTTTGAAAAATTAGG‑GGAAAAGGATTTTCTTTTGCTTCATGTTCTTCCTGACAGGTGTAATTAGATCAATTCCTTTTAATTcc        <  1:1283774/148‑1 (MQ=12)

                                                                                                                                    ttttACAACGCTCAGCTCCTAGATTTGTCAAAAAAGAGAAAACTCGCTCAATCACTTTTCTACGTTTTGAAAAATTA‑G‑GGAAAAGGATTTTCTTTTGCTTCGTGTTCTTCCTGACAGGTGTAATTAGATCAATTCCTTTTAATTCCAg      >  2:1684171/1‑148 (MQ=17)

                                                                                                                                    ttttACAACGCTCAGCTCCTAGATTTGTCAAAAAAGAGAAAACTCGCTCAATCACTTTTCTACGTTTTGAAAAATTA‑G‑GGAAAAGGATTTTCTTTTGCTTCGTGTTCTTCCTGACAGGTGTAATTAGATCAATTCCTTTTAATTCCAg      >  2:1115703/1‑148 (MQ=17)

                                                                                                                                    ttttACAACGCTCAGCTCCTAGATTTGTCAAAAAAGAAAAAACTCGCTCAATCACTTTTCTACGTTTTGAAAAATTAGG‑GGAAAAGGATTTTCTTTTGCTTCATGTTCTTCCTGACAGGTGTAATTAGATCAATTCCTTTTAATTCCa       >  2:4058343/1‑148 (MQ=12)

                                                                                                                                     tttACAACGCTCAGCTCCTAGATTTGTCAAAAAAGAGAAAACTCGCTCAATCACTTTTCTACGTTTTGAAAAATTA‑G‑GGAAAAGGATTTTCTTTTGCTTCGTGTTCTTCCTGACAGGTGTAATTAGATCAATTCCTTTTAATTCCAGc     >  2:58257/1‑148 (MQ=17)

                                                                                                                                       tACAACGCTCAGCTCCTAGATTTGTCAAAAAAGAGAAAACTCGCTCAATCACTTTTCTACGTTTTGAAAAATTA‑G‑GGAAAAGGATTTTCTTTTGCTTCATGTTCTTCCTGACAGGTGTAATTAGATCAATTCCTTTTAATTCCAGCCt   <  1:3250933/148‑1 (MQ=32)

                                                                                                                                       tACAACGCTCAGCTCCTAGATTTGTCAAAAAAGAAAAAACTCGCTCAATCACTTTTCTACGTTTTGAAAAATTAGG‑GGAAAAGGATTTTCTTTTGCTTCATGTTCTTCCTGACAGGTGTAATTAGATCAATTCCTTTTAATTCCAGcc    >  1:4062003/1‑148 (MQ=12)

                                                                                                                                        aCAACGCTCAGCTCCTAGATTTGTCAAAAAAGAGAAAACTCGCTCAATCACTTTTCTACGTTTTGAAAAATTA‑G‑GGAAAAGGATTTTCTTTTGCTTCGTGTTCTTCCTGACAGGTGTAATTAGATCAATTCCTTTTAATTCCAGCCTa  <  2:3786225/148‑1 (MQ=17)

                                                                                                                                        aCAACGCTCAGCTCCTAGATTTGTCAAAAAAGAGAAAACTCGCTCAATCACTTTTCTACGTTTTGAAAAATTA‑G‑GGAAAAGGATTTTCTTTTGCTTCGTGTTCTTCCTGACAGGTGTAATTAGATCAATTCCTTTTAATTCCAGCCTa  >  1:286249/1‑148 (MQ=17)

                                                                                                                                        aCAACGCTCAGCTCCTAGATTTGTCAAAAAAGAGAAAACTCGCTCAATCACTTTTCTACGTTTTGAAAAATTA‑G‑GGAAAAGGATTTTCTTTTGCTTCATGTTCTTCCTGACAGGTGTAATTAGATCAATTCCTTTTAATTCCAGCCTa  >  2:4154958/1‑148 (MQ=32)

                                                                                                                                        aCAACGCTCAGCTCCTAGATTTGTCAAAAAAGAAAAAACTCGCTCAATCACTTTTCTACGTTTTGAAAAATTAGG‑GGAAAAGGATTTTCTTTTGCTTCATGTTCTTCCTGACAGGTGTAATTAGATCAATTCCTTTTAATTCCAGCCt   >  2:127866/1‑148 (MQ=12)

                                                                                                                                        aCAACGCTCAGCTCCTAGATTTGTCAAAAAAGAAAAAACTCGCTCAATCACTTTTCTACGTTTTGAAAAATTAGG‑GGAAAAGGATTTTCTTTTGCTTCATGTTCTTCCTGACAGGTGTAATTAGATCAATTCCTTTTAATTCCAGCCt   >  2:1057650/1‑148 (MQ=12)

ATTTAGCCATGACTTGATACCCGATAGAATATCTTAAAGTCTCTGGTTCCAGTGATTTAGCTGATTTTAACAGTAAAGAATACGCTAAAAGTATCATCTCTAATTTCAATTGAAAACCTTGAGGCGAACGACTTTTACAACGCTCAGCTCCTAGATTTGTCAAAAAAGAGAAAACTCGCTCAATCACTTTTCTACGTTTTGAAAAATTA‑G‑GGAAAAGGATTTTCTTTTGCTTCATGTTCTTCCTGACAGGTGTAATTAGATCAATTCCTTTTAATTCCAGCCTA  >  CP043523/1890342‑1890625

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 27 ≤` `ATCG/ATCG` `< 37 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`