New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_000913	= 402412	50 (1.000)	3 (0.060)	3/408	5.2	5.3%	coding (666/1416 nt)	phoA	alkaline phosphatase
	?	NC_000913	= 3565759	58 (1.170)					coding (823/2448 nt)	glgP	glycogen phosphorylase
Rejected: Coverage evenness skew score above cutoff.
Rejected: Frequency below/above cutoff threshold.

GGCCAGGTTTCCAGCGCCTCGCTCATCAGCGTGTGGTTAGTGTAGGAGAAGACCTGACAACACACCTCAAACGCGTCGTCCCAGCTAAATTGGTGCTCATCGATCAGCAGACGCATCATCTCAGGAATCGACAGTACCGGATGGGTATCATTGAGATGAATCGCGATTTTATCCGCCAGGTTATCGTAGGTTTTATGCAACTGATAATGGCGGCTTAAAATGTCCTGAATGGTCGAGGAAACCAGGAAGTATTCCTGACGCAGGCGCAGCTCACGCCCGGAGTAGGTGGAGTCATCCGGATACAGTACGCGAGATACGTTCTCGGAGTGGTTTTTATCTTCCACTGCCGCGAAGTAGTCACCCTGGTTGAATTTACCGAGGTTAATTTCGCTACTGGCTTGCGCACTCCACAAACGCAGCGTGTTGGTCGCGTCGGTGTCGTAACCAGGGATTATCTGATCGTAAGCGACTCCCAGAATCTCTTCGGTTTCAATCCAGCGCGTTTTTTTACCTTCCTGCTGAATGCGACCGCCAAAACGGACTTTATAGCGCGTGTTGTGGCGTTTG  >  NC_000913/3565473‑3566039                                                                                                                                                                                                                                                                                               |                                                                                                                                                                                                                                                                                         ggCCAGGTTTCCAGCGCCTCGCTCATCAGCGTGTGGTTAGTGTAGGAGAAGACCTGACAACACAACTCAAACGCGTCGTCCCAGCTAAATTGGTGCTCATCGATCAGCAGACGCATCATCTCAGGAATCGACAGTACCGGATGGGTATCATTGAGATGAATCGCGATTTTATCCGCCAGGTTATCGTAGGTTTTATGCAACTGATAATGGCGGCTTAAAATGTCCTGATTGGTCGAGCAAACCAGGAAGTATTCATGACGCAGGCGCAGCTCACGCCCGGAGTAGGTg                                                                                                                                                                                                                                                                                         >  1:485218/1‑288 (MQ=255)                    cGCTCGTCAGCGTGTGGTTAGTGAAGGAGAAGACCTGACAACACACCTCAAGCCCGTCGTCCCAGCTAAATGGGTGCTCATCGATCAGCAGACGCATCATCTCAGGAATCGACAGTACCGGATGGGTATCATTGAGATGAATCGCGATTTTATCCGCCAGGTTATCGTAGGTTTTATGCAACTGATAATGGCGGCTTAAAATGTCCTGAATGGTCGAGGAAACCAGGAAGTATTCCTGACGCAGGCGCATCTCACGCCCGGAGTAGGTGGAGTCATCCGGATACAGTa                                                                                                                                                                                                                                                                      <  1:447508/288‑1 (MQ=255)                                tgtgGTTAGTGTAGGAGAAGACCTTACAACACACCTCAAACGCGTCGTCCCAGCTAAATTGGTGCTCATCGATCAGCAGACGCATCAACTCAGGAATCGACAGTACCGGATGGGTATCATTGAGATGAATCGCGATTTTATCCGCCAGGTTATCGTAGGTTTTATGCAACTGATAATGGCGGCTTAAAATGTCCTGAATGGTCGAGGAAACCAGGAAGTATTCCTGACGCAGGCGCAGCTCACGCCCGGAGAAGGTGGAGTCCTCCGGAt                                                                                                                                                                                                                                                                            >  1:299601/1‑270 (MQ=255)                                         tgtAGGAGAAGACCTGACAACACACCTCAAACGCGTCGTCCCAGCTAAATTGGTGCTCATCGATCAGCAGACGCATCATCTCAGGAATCGACAGTACCGGATGGGTATCATTGAGATGAATCGCGATTTTATCCGCCAGGTTATCGTAGGTTTTATGCAACTGATAATGGCGGCTTAAAATGTCCTGAATGGTCGAGGAAACCAGGAAGTATTCCTGACGCAGGCGCAGCTCACGCCCGGAGTAGGTGGAGTCATCCGGAt                                                                                                                                                                                                                                                                            >  1:492687/1‑261 (MQ=255)                                              gagaAGACCTGACAACACACCTCAAACGCGTCGTCCCAGCTAAATTGGTGCTCATCGATCAGCAGACGCATCATCTCAGGAATCGACAGTACCGGTTGGGTATCATTGAGATGAATCGCGATTTTATCCGCCAGGTTATCGTAGGATTTATGCAACTGATCATGGCGGCTTACAATGTCCTGAATGGTCGAGGAAACCAGGAAGTATTCCTGACGCAGGCGCAGCACACGCCCGGAGTCGGTGGAGTCATCCGGATACAGTACGCGAGATACGTTCTCGGAGTGGtgc                                                                                                                                                                                                                                            >  1:712384/1‑286 (MQ=255)                                                   gaCCTGACAACACACCTCAAACGCGTCGTCCCAGCTAAATTGGTGCTCATCGATCAGCAGACGCATCATCTCAGGAATCGACAGTACCGGATGGGTATCATTGAGATGAATCGCGATTTTATCCGCCAGGTTATCGTAGGTTTTATGCAACTGATAATGGCGGCTTAAAATGTCCTGAATGGTCGAGGAAACCAGGAAGTATTCCTGACGCAGGCGCAGCTCACGCCCGGAGTAGGTGGAGTCATCCGGATACAGTACGCGAGATACGTTCTCGGAGTGGTTTTTATc                                                                                                                                                                                                                                       >  1:120313/1‑288 (MQ=255)                                                   gaCCTGACAACACACCTCAAACGCGTCGTCCCAGCTAAATTGGTGCTCATCGATCAGCAGACGCATCATCTCAGGAATCGACAGTACCGGATGGGTATCATTGAGATGAATCGCGATTTTATCCGCCAGGTTATCGTAGGTTTTATGCAACTGATAATGGCGGCTTAAAATGTCCTGAATGGTCGAGGAAACCAGGAAGTATTCCTGACGCAGGCGCAGCTCACGCCCGGAGTAGGTGGAGTCATCCGGATACAGTACGCGAGATACGTTCTCGGAGTGGTTTTTATc                                                                                                                                                                                                                                       >  1:187582/1‑288 (MQ=255)                                                       tGACAACACACCTCAAACGCGTCGTCCCAGCTAAATTGGTGCTCATCGATCAGCAGACGCATCATCTCAGGAATCGACAGTACCGGATGGGTATCATTGAGATGAATCGCGATTTTATCCGCCAGGTTATCGTAGGTTTTATGCAACTGATAATGGCGGCTTAAAATGTCCTGAATGGTCGAGGAAACCAGGAAGTATTCCTGACGCAGGCGCAGCTCACGCCCGGAGTAGGTGGAGTCATCCGGATACAGTACGCGAGATACGTTCTCGGAGTg                                                                                                                                                                                                                                                <  1:299933/275‑1 (MQ=255)                                                                acCTCAAACGCGTCGTCCCAGCTAAATTGGTGCTCATCGATCAGCAGACGCATCATCTCAGGAATCGACAGTACCGGATGGGTATCATTGAGATGAATCGCGATTTTATCCGCCAGGTTATCGTAGGTTTTATGCAACTGATAATGGCGGCTTAAAATGTCCTGAATGGTCGAGGAAACCAGGAAGTATTCCTGACGCAGGCGCAGCTCACGCCCGGAGTAGGTGGAGTCATCCGGATACAGTACGCGAGATACGTTCTGGGAGTGGTTTTTATCTTCCACTGCcgcg                                                                                                                                                                                                                          >  1:823250/1‑288 (MQ=255)                                                                     aaaCGCGTCGTCCCAGCTAAATTGGTGCTCATCGATCAGCAGACGCATCATCTCAGGAATCGACAGTACCGGATGGGTATCATTGAGATGAATCGCGATTTTATCCGCCAGGTTATCGTAGGTTTTATGCAACTGATAATGGCGGCTTAAAATGTCCTGAATGGTCGAGGAAACCAGGAAGTATTCCTGACGCAGGCGCAGCTCACGCCCGGAGTAGGTGGAGTCATCCGGATACAGTACGCGAGATACGTTCTCGGAGTGGTTTTTATCTTCCACTGCCGCGAagta                                                                                                                                                                                                                     >  1:645813/1‑288 (MQ=255)                                                                                cccAGCTAAATTGGTGCTCATCGATCAGCAGACGCATCATCTCAGGAATCGACAGTACCGGATGGGTATCATTGAGATGAATCGCGATTTTATCCGCCAGGTTATCGTAGGTTTTATGCAACTGATAATGGCGGCTTAAAATGTCCTGAATGGTCGAGGAAACCAGGAAGTATTCCTGACGCAGGCGCAGCTCACGCCCGGAGTAGGTGGAGTCATCCGGATACAGTACGCGAGATACGTTCTCGGAGTGGTTTTTATCTTCCACTGCCGCGAAGTAGTCACCCTGGt                                                                                                                                                                                                          <  1:713267/288‑1 (MQ=255)                                                                                         aTTGGTGCTCATCGATCAGCAGACGCATCATCTCAGGAATCGACAGTACCGGATGGGTATCATTGAGATGAATCGCGATTTTATCCGCCAGGTTATCGTAGGTTTTATGCAACTGATAATGGCGGCTTAAAATGTCCTGAATGGTCGAGGAAACCAGGAAGTATTCCTTACGCAGGCGCAGCCCACGCCCGGAGTAGGTggc                                                                                                                                                                                                                                                                                       >  2:205272/1‑201 (MQ=255)                                                                                               gCTCATCGATCAGCAGACGCATCATCTCAGGAATCGACAGTCCCGGATGGGTATCATTGAGATGAATCGCGATTTTATCCGCCAGGTTATCGTAGGTTTTATGCAACTGATAATGGCGGCTTAAAATGTCCTGAATGGTCGAGGAAACCAGGAAGTATTCCTGACGCCGGCGCAGCTCACGCCCGGAGTAGGTGGAGTCATCCGGATACAGTACGCGAGATACGTTATCGGAGTGGTTTTTATCTTCAACTGCCGCGAAGTAGTACCCCTGGTTGAATTTACCGAGGt                                                                                                                                                                                           >  1:375513/1‑288 (MQ=255)                                                                                                cTCATCGATCAGCAGACGCATCATCTCAGGAATCGACAGTACCGGATGGGTATCATTGAGATGAATCGCGATGTTATCCGCCAGGTTATCGTAGGTTTTATGCAACTGATAATGGCGGCTTAAAATGTCCTGAATGGTCGAGGAAACCAGGAAGTATTCCTGACGCAGGCGCAGCTCACGCCCGGAGTAGGTGGAGTCATCCGGATACAGTACGCGAGGTACGTTCTCGGAGTGGTTTTTATCTTGCAACGCCGCCAAGTAGTCACCCTGGTTGAATTTACCGAGGta                                                                                                                                                                                          >  1:658146/1‑287 (MQ=255)                                                                                                  cATCGATCAGCAGACGCATCATCTCAGGAATCGACAGTACCGGATGGGTATCATTGAGATGAATCGCGATTTTATCCGCCAGGTTATCGTAGGTTTTATGCAACTGATAATGGCGGCTTAAAATGTCCTGAATGGTCGAGGAAACCAGGAAGTATTCCTGACGCAGGCGCAGCTCACGCCCGGAGTAGGTGGAGTCATCCGGATACAGTACGCGAGATACGTTCTCGGAGTGGTTTTTATCTTCCACTGCCGCGAAGTAGTCACCCTGGTTGAATTTACCGAGGTTaa                                                                                                                                                                                        >  1:811628/1‑288 (MQ=255)                                                                                                                           aGGAATCGACAGTACCGGATGGGTATCATTGAGATGAATCGCGATTTTATCCGCCAGGTTATCGTAGGTTTTATGCAACTGATAATGGCGGCTTAAAATGTCCTGAATGGTCGAGGAAACCAGGAAGTATTCCTGACGCAGGCGCAGCTCACGCCCGGAGTAGGTGGAGTCATCCGGATACAGTACGCGAGATACGTTCTCGGAGTGGTTTTTATCTTCCACTGCCGCGAAGTAGTCACCCTGGTTGAATTTACCGAGGTTAATTTCGCTACTgg                                                                                                                                                                            >  1:300443/1‑275 (MQ=255)                                                                                                                                       tACCGTATGGGTATCATTGAGATGAATCGCGATTTTATCCGCCAGGTTATCGTAGGTTTTATGCAACTGATAATGGCGGCTTAAAATGTCCTGAATGTTCGAGGAAACCAGGAAGTATTCCTGACGCAGGCGCAGCTCACGCCCGGAGTAGGTGGAGTCATCCGGATACAGTACGCGAGATACGTTCTCGGAGTGGTTTTTATCTTCCACTGCCGCGAAGTAGTCACCCTGGTTGAATTTACCGAGGTTAATTTCGCTACTGGCTTGCGCACTCCACAACCGCAGCgt                                                                                                                                                   >  1:639072/1‑288 (MQ=255)                                                                                                                                       tACCGGATGGGTATCATTGAGATGAATCGCGATTTTATCCGCCAGGTTATCGTAGGTTTTATGCAACTGATAATGGCGGCTTAAAATGTCCTGAATGGTCGAGGAAACCAGGAAGTATTCCTGACGCAGGCGCAGCTCACGCCCGGAGTAGGTGGAGTCATCCGGa                                                                                                                                                                                                                                                                             >  2:316893/1‑166 (MQ=255)                                                                                                                                       tACCGGATGGGTATCATTGAGATGAATCGCGATTTTATCCGCCAGGTTATCGTAGGTTTTATGCAACTGATAATGGCGGCTTAAAATGTCCTGAATGGTCGAGGAAACCAGGAAGTATTCCTGACGCAGGCGCAGCTCACGCCCGGAGTAGGTGGAGTCATCCGGa                                                                                                                                                                                                                                                                             <  1:316893/166‑1 (MQ=255)                                                                                                                                                 gTATCATTGAGATGAATCGCGATTTTATCCGCCAGGTTATCGTAGGTTTTATGCAACTGATAATGGCGGCTTAAAATGTCCTGAATGGTCGAGGAAACCAGGAAGTATTCCTGACGCAGGCGCAGCTCACGCCCGGAGTAGGTGGAGTCATCCGGATACAGTACGCGAGATACGTTCTCGGAGTGGTTTTTATCTTCCACTGCCGCGAAGTAGTCACCCTGGTTGAATTTACCGAGGTTAATTTCGCTACTGGCTTGCGCACTCCACAAACGCAGCGTGTTGGTcgc                                                                                                                                          >  1:360562/1‑287 (MQ=255)                                                                                                                                                   aTCATTGAGATGCATCGCTATTTTATCCGCCAGGTTATCGTAGGTTTTATGCAACTTATAATGGCGGCTTAAAATGTGCTGAATGGTCGAGGAAACCAGGAAGTATTCCTGACGCAGGCGCAGCTCACGCCCGGAGTAGGTGGAGTCa                                                                                                                                                                                                                                                                                   <  2:515755/148‑1 (MQ=255)                                                                                                                                                   aTCATTGAGATGCAGCGCTATTTTATCCGCCAGGTTATCGTAGGTTTTATGCAACTGATACTGGCCGCTTAAAATGTCCTGAATGGTCGAGGAAACCAGGAAGTATTCCTGACGCAGGCGCAGCTCACGCCCGGAGTAGGTGGAGTCATCCGGATACAGTACGCGAGTTACGTTCTCGGAGTGGTTTTTGTCTTCCACTGCCGCGAAGTAGTCAACCTGGTTGAATTTACCGAGGTTAATTTCGCTACt                                                                                                                                                                              <  1:40998/249‑1 (MQ=255)                                                                                                                                                   aTCATTGAGATGAGTCGCGCTTTTATCCGCCAGGTTATCGTAGGTTTTATGCAACTGATAATGGCGGCTTAAAATGTCCTGAATAGTCGAGGAAACCAGGAAGTATTCCTGACGCAGGCGCAGCTCACGCCCGGAGTAGGTGGAGTCATCCGGATACAGTACGCGAGATACGTTCTCGGa                                                                                                                                                                                                                                                   <  2:647546/180‑1 (MQ=255)                                                                                                                                                    tCATTTAGAAGAATCGTGTTTTTATCCGACAGGTTTTCGTAGGTTTTATGCAACTGATAAGGGAGGCTTAACATGTCCTGAATGGTCGAGGAAACCAGGAAGTATTCCTGACGCAGGCGCAGCTCACGCCCGGAGTAGGTGGAGTCATCCGGATACAGTACGCGAGATACGTTCTCGGAGTGGTTTTTATCTTCCACTGCCGCTAAGTAGTCAGCCTGGTTGAATTTACCGAGGTTAATTTCGCTACTGGCTTGCGCACTCCACAAACGCAGCGTGTTGGTCGCGTCg                                                                                                                                      <  1:188898/288‑1 (MQ=255)                                                                                                                                                      aTTGAGATGAATCGCGATTTTATCCGCCAGGTTATCGTAGGTTTTATGCAACTGATAATGGCGGCTTAAAATGTCCTGAATGGTCGAGGAAACCAGGAAGTATTCCTGACGCAGGCGCAGCTCACGCCCGGAGTAGGTGGAGTCATCCGGATACAGGACGCGAGATGCGTTCTCGGAGTGGTTTTTATCTTCCACTGCCGCGAAGTAGTCACCCTGGTTGAATTTAcc                                                                                                                                                                                                <  1:833135/228‑1 (MQ=255)                                                                                                                                                          agaTGAATCGCGATTTTATCCGCCAGGTTATCGTAGGTTTTATGCAACTGATAATGGCGGCTTAAAATGTCCTGAATGGTCGAGGAAACCAGGAAGTATTCCTGACGCAGGCGCAGCTCACGCCCGGAGTAGGTGGAGTCATCCGGATACAGTACGCGAGATACGTTCTCGGAg                                                                                                                                                                                                                                                  <  2:249200/174‑1 (MQ=255)                                                                                                                                                          agaTGAATCGCGATTTTATCCGCCAGGTTATCGTAGGTTTTATGCAACTGATAATGGCGGCTTAAAATGTCCTGAATGGTCGAGGAAACCAGGAAGTATTCCTGACGCAGGCGCAGCTCACGCCCGGAGTAGGTGGAGTCATCCGGATACAGTACGCGAGATACGTTCTCGGAg                                                                                                                                                                                                                                                  >  1:249200/1‑174 (MQ=255)                                                                                                                                                            aTGCATCGCGATTTTATCCGCCAGGTTATCGTAGGTTTTATGCGACTGATAATGCCGGCTGTAAATGTACTGAATGGTCGAGGAAACCAGGAAGTATTCCTGACGCAGGCGCAGCTCACGCCCGGAGGAGGTGGAGGCATCCGGATACAGTACGCGAGATACGTTCTCGGAGTGGttttt                                                                                                                                                                                                                                          >  1:647546/1‑180 (MQ=255)                                                                                                                                                            aTGAATCGCGATTTTATCCGCCAGGTTATCGTAGGTTTTATGCAACTGATAATGGCGGCTTAAAATGTCCTGAATGGTCGAGGAAACCAGGAAGTATTCCTGACGCAGGCGCAGCTCACGCCCGGAGTAGGTGGAGTCATCCGGATAc                                                                                                                                                                                                                                                                          >  1:515755/1‑148 (MQ=255)                                                                                                                                                              gAATCGCGATTTTATCCGCCAGGTTATCGTAGGTTTTATGCAACTGATAATGGCGGCTTAAAATGTCCTGAATGGTCGAGGAAACCAGGAAGTATTCCTGACGCAGGCGCAGCTCACGCCCGGAGTAGGTGGAGTCATCCGGATACAGTACGCGAGATACGTtct                                                                                                                                                                                                                                                       >  2:704809/1‑165 (MQ=255)                                                                                                                                                              gAATCGCGATTTTATCCGCCAGGTTATCGTAGGTTTTATGCAACTGATAATGGCGGCTTAAAATGTCCTGAATGGTCGAGGAAACCAGGAAGTATTCCTGACGCAGGCGCAGCTCACGCCCGGAGTAGGTGGAGTCATCCGGATACAGTACGCGAGATACGTtct                                                                                                                                                                                                                                                       <  1:704809/165‑1 (MQ=255)                                                                                                                                                              gAATCGCGATTTTATCCGCCAGGTTATCGTAGGTTTTATGCAACTGATAATGGCGGCTTAAAATGTCCTGAATGGTCGAGGAAACCAGGAAGTATTCCTGACGCAGGCGCAGCTCACGCCCGGAGTAGGTGGAGTCATCCGGATACAGTACGCGAGATACGTTCTCGGAGTGGTTTTTATCTTCCACTGCCGCGAAGTAGTCACCCTGGTTGAATTTACCGAGGTTAATTTCGCTACTGGCTTGCGCACTCCACAAACGCAGCGTGTTGGTCGCGTCGGTGTCGTAAc                                                                                                                            <  1:369583/288‑1 (MQ=255)                                                                                                                                                                                                  tATGCAACTGATAATGGCGGCTTAAAATGTCCTGAATGGTCGAGGAAACCAGTAAGCATTCCTGACGCAGGCGCAGCTCACGCCCGGAGTAGGTGGAGTCATCCGGATACAGTACGCGAGATACGTTCTCGGAGTGGTTTTTATCTTCCACTGCCGCGAAGTAGTCACCCTGGTTGAATTTACCGAGGTTAATTTCGCTACTGGCTTGCGCACTCCACAAACGCAGCGTGTTGGTCGCGTCGGTGTCGTAACCAgg                                                                                                                        >  1:715686/1‑256 (MQ=255)                                                                                                                                                                                                  tATGCAACTGATAATGGCGGCTTAAAATGTCCTGAATGGTCGAGGAAACCAGGAAGTATTCCTGACGCAGGCGCAGCTCACGCCCGGAGTAGGTGGAGTCATCCGGATACAGTACGCGAGATACGTTCTCGGAg                                                                                                                                                                                                                                                  >  2:318025/1‑134 (MQ=255)                                                                                                                                                                                                  tATGCAACTGATAATGGCGGCTTAAAATGTCCTGAATGGTCGAGGAAACCAGGAAGTATTCCTGACGCAGGCGCAGCTCACGCCCGGAGTAGGTGGAGTCATCCGGATACAGTACGCGAGATACGTTCTCGGAg                                                                                                                                                                                                                                                  <  1:318025/134‑1 (MQ=255)                                                                                                                                                                                                         cTGATAATGGCGGCTTAAAATGTCCTGAATGGTCGAGGAAACCAGGAAGTATTCCTGACGCAGGCGCAGCTCACGCCCGGAGTAGGTGGAGTCATCCGGATACAGTACGCGAGATa                                                                                                                                                                                                                                                             >  2:474738/1‑116 (MQ=255)                                                                                                                                                                                                         cTGATAATGGCGGCTTAAAATGTCCTGAATGGTCGAGGAAACCAGGAAGTATTCCTGACGCAGGCGCAGCTCACGCCCGGAGTAGGTGGAGTCATCCGGATACAGTACGCGAGATa                                                                                                                                                                                                                                                             <  1:474738/116‑1 (MQ=255)                                                                                                                                                                                                         cTGATAATGGCGGCTTAAAATGTCCTGAATGGTCGAGGAAACCAGGAAGTATTCCTGACGCAGGCGCAGCTCACGCCCGGAGTAGGTGGAGTCATCCGGATACAGTACGCGAGATACGTTCTCGGAGTGGTTTTTATCTTCCACTGCCGCGAAGTAGTCACCCTGGTTGAATTTACCGAGGTTAATTTCGCTACTGGCTTgcg                                                                                                                                                                      >  1:605997/1‑203 (MQ=255)                                                                                                                                                                                                         cTGATAATGGCGGCTTAAAATGTCCTGAATGGTCGAGGAAACCAGGAAGTATTCCTGACGCAGGCGCAGCTCACGCCCGGAGTAGGTGGAGTCATCCGGATACAGTACGCGAGATACGTTCTCGGAGTGGTTTTTATCTTCCACTGCCGCGAAGTAGTCACCCTGGTTGAATTTACCGAGGTTAATTTCGCTACTGGCTTgcg                                                                                                                                                                      <  2:605997/203‑1 (MQ=255)                                                                                                                                                                                                                 ggcggcTTAAAATGTCCTGAATGGTCGAGGAAACCAGGAAGTATTCCTGACGCAGGCGCAGCTCACGCCCGGAGTAGGTGGAGTCATCGGGATACAGTACGCGAGATACGTTCTCGGAGTGGTTTTTATCTTCCACTGCCGCGAAGTAGTCACCCTGGTTGAATTTACCGAGGTTAATTTCGCTa                                                                                                                                                                                >  2:844298/1‑185 (MQ=255)                                                                                                                                                                                                                 ggcggcTTAAAATGTCCTGAATGGTCGAGGAAACCAGGAAGTATTCCTGACGCAGGCGCAGCTCACGCCCGGAGTAGGTGGAGTCATCCGGATACAGTACGCGAGATACGTTCTCGGAGTGGTTTTTATCTTCCACTGCCGCGAAGTAGTCACCCTGGTTGAATTTACCGAGGTTAATTTCGCTa                                                                                                                                                                                <  1:844298/185‑1 (MQ=255)                                                                                                                                                                                                                                    aaTGGTCGAGGAAACCAGGAAGTATTCCTGACGCAGGCGCAGCTCACGCCCGGAGTAGGTGGAGTCATCCGGATACAGTACGCGAGATACGTTCTCGGAGTGGTTTTTATCTTCCACTGCCGCGAAGTAGTCACCCTGGTTGAATTTACCGAGGTTAATTTCGCTACTGGCTTGCGCACTCCACAAACGCAGCGTGTTGGTCGCGTCGGTGTc                                                                                                                                 <  2:658468/213‑1 (MQ=255)                                                                                                                                                                                                                                    aaTGGTCGAGGAAACCAGGAAGTATTCCTGACGCAGGCGCAGCTCACGCCCGGAGTAGGTGGAGTCATCCGGATACAGTACGCGAGATACGTTCTCGGAGTGGTTTTTATCTTCCACTGCCGCGAAGTAGTCACCCTGGTTGAATTTACCGAGGTTAATTTCGCTACTGGCTTGCGCACTCCACAAACGCAGCGTGTTGGTCGCGTCGGTGTc                                                                                                                                 >  1:658468/1‑213 (MQ=255)                                                                                                                                                                                                                                       ggTCGAGGAAACCAGGAAGTATTCCTGACGCAGGCGGAGCTCACGCCCGGAGTAGGTGGAGTCATCCGGATACAGTACGCGAGATCCGTTCTCGGAGTGGTTTTTATCTTCCACTGCCGCGAAGTAGTCACCCTGGTTGAATTTAACGAGGTTAATTTCGCTGCTGGCTTGCGCACGCCACAAACGCAGCGTGTTGGTCGCGTCGGTGTCGTAACCAGGGATTATCTGATCGTAAGCGACTCCCAGAATCTCTTCGGTATCAATCCAGCGCGTTTTTTTACCTTCctg                                                   <  1:112493/288‑1 (MQ=255)                                                                                                                                                                                                                                         tCGAGGAAACCAGGAAGTATTCCTGACGCAGGCGCAGCTCACGCCCGGAGTAGGTGGAGTCATCCGGATACAGTACGCGAGATACGTTCTCGGAGTGGTTTTTATCTTCCACTGCCGCGAAGTAGTCACCCTGGTTGAATTTACCGAGGTTAATTTCGCTACTGGCTTGCGCACTCCACAAACg                                                                                                                                                         <  2:592565/184‑1 (MQ=255)                                                                                                                                                                                                                                         tCGAGGAAACCAGGAAGTATTCCTGACGCAGGCGCAGCTCACGCCCGGAGTAGGTGGAGTCATCCGGATACAGTACGCGAGATACGTTCTCGGAGTGGTTTTTATCTTCCACTGCCGCGAAGTAGTCACCCTGGTTGAATTTACCGAGGTTAATTTCGCTACTGGCTTGCGCACTCCACAAACg                                                                                                                                                         >  1:592565/1‑184 (MQ=255)                                                                                                                                                                                                                                                   cAGGAAGTATTCCTGACGCAGGCGCAGCTCACGCCCGGAGTAGGTGGAGTCAt                                                                                                                                                                                                                                                                                  >  1:393603/1‑53 (MQ=255)                                                                                                                                                                                                                                                   cAGGAAGTATTCCTGACGCAGGCGCAGCTCACGCCCGGAGTAGGTGGAGTCAt                                                                                                                                                                                                                                                                                  <  2:393603/53‑1 (MQ=255)                                                                                                                                                                                                                                                         gTATTCCTGACGCAGGCGCATCTCACGCCCGGAGTAGGTGGAGGCATCCGGATACAGTACGCGAGATACGTTCTCGGAGTGGTTTTTAACTTCCACTGCCGCGAAGTAGTCACCCTGGTTGAATTTACCGAGGTTAATTTCGCTACTGGCTTGCGCACTCCACAAACGCAGCGTGTTGGTCGCGTCGGTGTCGTAACCAGGGATTATCTGATCGTAAGCGACTCCCAGAATCTCTTCGGTTTCAATCCAGCGCGTTTTTTTACCTTCCTGCTGAATGCGACCGCCaaa                                 <  1:313193/288‑1 (MQ=255)                                                                                                                                                                                                                                                            ttCCTGACGCAGGCGCAGCTCACGCCCGGAGTAGGTGGAGTCATCCGGATACAGTACGCGAGATACGTTCTCGGAGTGGTTTTTATCTTCCACTGCcgcg                                                                                                                                                                                                                          >  2:495541/1‑100 (MQ=255)                                                                                                                                                                                                                                                            ttCCTGACGCAGGCGCAGCTCACGCCCGGAGTAGGTGGAGTCATCCGGATACAGTACGCGAGATACGTTCTCGGAGTGGTTTTTATCTTCCACTGCcgcg                                                                                                                                                                                                                          <  1:495541/100‑1 (MQ=255)                                                                                                                                                                                                                                                                    gCAGGCGCAGCTCACGCCCGGAGTAGGTGGAGTCATCCGGATACAGTACGCGAGATACGTTCTCGGAGTGGTTTTTATCTTCCACTGCCGCGAAGTAGTCACCCTGGTTGAATTTACCGAGGTTAATTTCGCTACTGGCTTgcg                                                                                                                                                                      <  1:188367/144‑1 (MQ=255)                                                                                                                                                                                                                                                                    gCAGGCGCAGCTCACGCCCGGAGTAGGTGGAGTCATCCGGATACAGTACGCGAGATACGTTCTCGGAGTGGTTTTTATCTTCCACTGCCGCGAAGTAGTCACCCTGGTTGAATTTACCGAGGTTAATTTCGCTACTGGCTTgcg                                                                                                                                                                      >  2:188367/1‑144 (MQ=255)                                                                                                                                                                                                                                                                         cgcAGCTCACGCCCGGAGTAGGTGGAGTCATCCGGa                                                                                                                                                                                                                                                                             <  2:647855/36‑1 (MQ=255)                                                                                                                                                                                                                                                                                  cGCCCGGAGTAGGTGGAGTCATCCGGATACAGTAcg                                                                                                                                                                                                                                                                    >  1:647855/1‑36 (MQ=255)                                                                                                                                                                                                                                                                                  cGCCCGGAGTAGGTGGAGTCATCCGGATACAGTACGCGAGGTACGTTCTCGGAGTGGTTTTTATCTTCCACTGCCGCGAAGTAGTCACCCTGGTTGAATTTACCGAGGTTAATTTCGCTACTGGCTTGCGCACTCCACAAACGCAGCGTGTTGGTCGCGTCGGTGTCGTAACCAGGGATTAt                                                                                                                  <  2:617452/182‑1 (MQ=255)                                                                                                                                                                                                                                                                                  cGCCCGGAGTAGGTGGAGTCATCCGGATACAGTACGCGAGATACGTTCTCGGAGTGGTTTTTATCTTCCACTGCCGCGAAGTAGTCACCCTGGTTGAATTTACCGAGGTTAATTTCGCTACTGGCTTGCGCACTCCACAAACGCAGCGTGTTGGTCGCGTCGGTGTCGTAACCAGGGATTAt                                                                                                                  >  1:617452/1‑182 (MQ=255)                                                                                                                                                                                                                                                                                  cGCCCGGAGTAGGTGGAGTCATCCGGATACAGTACGCGAGATACGTTCTCGGAGTGGTTTTTATCTTCCACTGCCGCGAAGTAGTCACCCTGGTTGAATTTACCGAGGTTAATTTCGCTACTGGCTTGCGCACTCCACAAACGCAGAGTGTTGGTCGCGTCGGTGTCGTAACCAGGGATTATCTGATCGTAAGCGACTCCCAGAATCTCTTCGGTTTCAATCCAGCGCGTTTTTTTACCTTCCTGCTGAATGCGACCGCCACAACGGACTTTATAGCGCGTGTTgggg        >  1:482737/1‑288 (MQ=255)                                                                                                                                                                                                                                                                                        gAGTAGGTGGAGTCATCCGGATACAGTACGCGAGATACGTTCTCGGAGTGGTTTTTATCTTCCACTGCCGCGAAGTAGTCACCCTGGTTGAATTTACCGAGGTTAATTTCGCTACTGGCTTGCGCACTCCACAAACGCAGCGTGTTGGTCGCGTCGGTGTCGTAACCAGGGATTATCTGATCGTAAGCGACTCCCAGAATCTCTTCGGTTTCAATCCAGCGCGTTTTTTTACCTTCCTGCTGAATGCGACCGCCAAAACGGACTTTATAGCGCGTGTTTTGGCGTTTg  >  1:94519/1‑288 (MQ=255)                                                                                                                                                                                                                                                                                        gAGTAGGTGGAGTCATCCGGATACAGTACGCGAGATACGTTCTCGGAGTGGTTTTTATCTTCCACTGCCGCGAAGTAGTCACCCTGGTTGAATTTACCGAGGTTAATTTCGCTACTGGCTTGCGCACTCCACAAACGCAGCGTGTTGGTCGCGTCGGTGTCGTAACCAGGGATCATCTGATCGTAAGCGACTCCCAGAATCTCTGCGGTTTCAATCCAGCGCGTTTTTTTACCTTCctgc                                                  >  1:514001/1‑240 (MQ=255)                                                                                                                                                                                                                                                                                               |                                                                                                                                                                                                                                                                                         GGCCAGGTTTCCAGCGCCTCGCTCATCAGCGTGTGGTTAGTGTAGGAGAAGACCTGACAACACACCTCAAACGCGTCGTCCCAGCTAAATTGGTGCTCATCGATCAGCAGACGCATCATCTCAGGAATCGACAGTACCGGATGGGTATCATTGAGATGAATCGCGATTTTATCCGCCAGGTTATCGTAGGTTTTATGCAACTGATAATGGCGGCTTAAAATGTCCTGAATGGTCGAGGAAACCAGGAAGTATTCCTGACGCAGGCGCAGCTCACGCCCGGAGTAGGTGGAGTCATCCGGATACAGTACGCGAGATACGTTCTCGGAGTGGTTTTTATCTTCCACTGCCGCGAAGTAGTCACCCTGGTTGAATTTACCGAGGTTAATTTCGCTACTGGCTTGCGCACTCCACAAACGCAGCGTGTTGGTCGCGTCGGTGTCGTAACCAGGGATTATCTGATCGTAAGCGACTCCCAGAATCTCTTCGGTTTCAATCCAGCGCGTTTTTTTACCTTCCTGCTGAATGCGACCGCCAAAACGGACTTTATAGCGCGTGTTGTGGCGTTTG  >  NC_000913/3565473‑3566039

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 10 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.