New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913 365527 =20 (0.070)252 (0.880) 124/178 0.4 68.0% coding (3/3075 nt) lacZ beta‑D‑galactosidase
?NC_000913 4589230 = 218 (0.770)coding (4/1656 nt) tsr methyl‑accepting chemotaxis protein I

Only 100 of 495 total aligned reads displayed.

ATTCACTCGGCGTAATCTCCGCGGGATATTCATAAAGTTTTTCCTTTCCAGGCCGAAAATCTTGCATCGGTCCACAGGAAAGAGAAACCATGTTAAAACGTATCAAAATTGTGACCAGCTTACTGCTGGTTTTGGCCGTTTTTGGCCTTTTACAACTGACATCAGGCGGTCTGTTCTTTAATGCC  >  NC_000913/4589138‑4589322
                                                                                            |                                                                                            
 ttCACTCGGCGTAATCTCCGCGGGATATTCATAAAGTTTTTCCTTTCCAGGCCGAAAATCTTGCATCGGTCCACAGGAAAGAGAAACCATGtt                                                                                             <  2:7407834/93‑1 (MQ=255)
    gcaccccaggctttacactttatgcttccggctcgtatgttgtgtggaattgtgagcggataacaatttcacacaggaaacagctatgTTaaa                                                                                          <  1:1224369‑M2/5‑1 (MQ=255)
    gcaccccaggctttacactttatgcttccggctcgtatgttgtgtggaattgtgagcggataacaatttcacacaggaaacagctatgTTaaa                                                                                          <  1:3517652‑M2/5‑1 (MQ=255)
     cTCGGCGTAATCTCCGCGGGATATTCATAAAGTTTTTCCTTTCCAGGCCGAAAATCTTGCATCGGTCCACAGGAAAGAGAAACCATGTTaaaa                                                                                         >  2:128959/1‑93 (MQ=255)
     cTCGGCGTAATCTCCGCGGGATATTCATAAAGTTTTTCCTTTCCAGGCCGAAAATCTTGCATCGGTCCACAGGAAAGAGAAACCATGTTaaaa                                                                                         <  1:2131964/93‑1 (MQ=255)
      tCGGCGTAATCTCCGCGGGATATTCATAAAGTTTTTCCTTTCCAGGCCGAAAATCTTGCATCGGTCCACAGGAAAGAGAAACCATGTTAAAAc                                                                                        >  2:7476138/1‑93 (MQ=255)
      tCGGCGTAATCTCCGCGGGATATTCATAAAGTTTTTCCTTTCCAGGCCGAAAATCTTGCATCGGGCCACAGGAAAGAGAAACCATGTTAAAAc                                                                                        >  1:7131494/1‑93 (MQ=255)
       ccccaggctttacactttatgcttccggctcgtatgttgtgtggaattgtgagcggataacaatttcacacaggaaacagctatgTTAAAACg                                                                                       >  2:2046406‑M2/86‑93 (MQ=255)
       ccccaggctttacactttatgcttccggctcgtatgttgtgtggaattgggtgcggataacaatttcacacaggaaacagctatgTTAAAACg                                                                                       >  1:5492961‑M2/86‑93 (MQ=255)
        ggCGTAATCTCCGCGGGATATTCATAAAGTTTTTCCTTTCCAGGCCGAAAATCTTGCATCGGTCCACAGGAAAGAGAAACCATGTTAAAACGt                                                                                      >  1:5143666/1‑93 (MQ=255)
         ccaggctttacactttatgcttccggctcgtatgttgtgtggaattgtgagcggataacaatttcacacaggaaacagctatgTTAAAACGTa                                                                                     <  2:6304624‑M2/10‑1 (MQ=255)
         ccaggctttacactttatgcttccggctcgtatgttgtgtggaattgtgagcggataacaatttcacacaggaaacagctatgTTAAAACGTa                                                                                     >  2:1943886‑M2/84‑93 (MQ=255)
           gTAATCTCCGCGGGATATTCATAAAGTTTTTCCTTTCCAGGCCGAAAATCTTGCATCGGTCCACAGGAAAGAGAAACCATGTTAAAACGTATc                                                                                   >  2:4375253/1‑93 (MQ=255)
           gTAATCTCCGCGGGATATTCATAAAGTTTTTCCTTTCCAGGCCGAAAATCTTGCATCGGTCCACAGGAAAGAGAAACCATGTTAAAACGCATc                                                                                   >  1:919621/1‑93 (MQ=255)
           aggctttacactttatgcttccggctcgtatgttgtgtggaattgtgagcggataacaatttcacacaggaaacagctatgTTAAAACGTATc                                                                                   >  1:3368412‑M2/82‑93 (MQ=255)
            tAATCTCCGCGGGATATTCATAAAGTTTTTCCTTTCCAGGCCGAAAATCTTGCATCGGTCCACAGGAAAGAGAAACCATGTTAAAACGTATCa                                                                                  >  2:3174132/1‑93 (MQ=255)
            tAATCTCCGCGGGATATTCATAAAGTTTTTCCTTTCCAGACCGAAAATCTTGCATCGGTCCACAGGAAAGAGTAACCATGTTAAAACGTATCa                                                                                  >  1:6442551/1‑93 (MQ=255)
                ttacactttatgcttccggctcgtatgttgtgtggaattgtgagcggataacaatttcacacaggaaacagctatgTTAAAACGTATCAAAAt                                                                              >  2:3828792‑M2/77‑93 (MQ=255)
                ttacactttatgcttccggctcgtatgttgtgtggaattgtgagcggataacaatttcacacaggaaacagctatgTTAAAACGTATCAAAAt                                                                              >  2:1461622‑M2/77‑93 (MQ=255)
                ttacactttatgcttccggctcgtatgttgtgtggaattgtgagcggataacaatttcacacaggaaacagctatgTTAAAACGTATCAAAAt                                                                              >  2:3281989‑M2/77‑93 (MQ=255)
                  ccGCGGGATATTCATAAAGTTTTTCCTTTCCAGGCCGAAAATCTTGCATCGGTCCACAGGAAAGAGAAACCATGTTAAAACGTATCAAAATtg                                                                            >  1:1860155/1‑93 (MQ=255)
                   cgcgGGATATTCATAAAGTTTTTCCTTTCCAGGCCGAAAATCTTGCATCGGTCCACAGGAAAGAGAAACCATGTTAAAACGTATCAAAATtgt                                                                           <  2:1675771/93‑1 (MQ=255)
                    gcgGGATATTCATAAAGTTTTTCCTTTCCAGGCCGAAAATCTTGCATCGGTCCACAGGAAAGAGAAACCATGTTAAAACGTATCAAAATtgtg                                                                          <  1:3572044/93‑1 (MQ=255)
                    gcgGGATATTCATAAAGTTTTTCCTTTCCAGGCCGAAAATCTTGCATCGGTCCACAGGAAAGAGAAACCATGTTAAAACGTATCAAAATtgtg                                                                          >  1:410379/1‑93 (MQ=255)
                    actttatgcttccggctcgtatgttgtgtggaattgtgagcggataacaatttcacacaggaaacagctatgTTAAAACGTATCAAAATtgtg                                                                          <  2:4521140‑M2/21‑1 (MQ=255)
                      gggATATTCATAAAGTTTTTCCTTTCCAGGCCGAAAATCTTGCATCGGTCCACAGGAAAGAGAAACCATGTTAAAACGTATCAAAATTGTGAc                                                                        >  1:7481399/1‑93 (MQ=255)
                       ggATATTCATAAAGTTTTTCCTTTCCAGGCCGAAAATCTTGCATCGGTCCACAGGAAAGAGAAACCATGTTAAAACGTATCAAAATTGTGAcc                                                                       <  2:5586926/93‑1 (MQ=255)
                          tgcttccggctcgtatgttgtgtggaattgtgagcggataacaatttcacacaggaaacagctatgTTAAAACGTATCAAAATTGTGACCAGc                                                                    <  1:4310838‑M2/27‑1 (MQ=255)
                          tgcttccggctcgtatgttgtgtggaattgtgagcggataacaatttcacacaggaaacagctatgTTAAAACGTATCAAAATTGTGACCAGc                                                                    >  1:5598297‑M2/67‑93 (MQ=255)
                          tatTCATAAAGTTTTTCCTTTCCAGGCCGAAAATCTTGCATCGGTCCACAGGAAAGAGAAACCATGTTAAAACGTATCAAAATTGTGACCAGc                                                                    >  1:6368269/1‑93 (MQ=255)
                           gcttccggctcgtatgttgtgtggaattgtgagcggataacaatttcacacaggaaacagctatgTTAAAACGTATCAAAATTGTGACCAGCt                                                                   >  2:2226146‑M2/66‑93 (MQ=255)
                           atTCATAAAGTTTTTCCTTTCCAGGCCGAAAATCTTGCATCGGTCCACAGGAAAGAGAAACCATGTTAAAACGTATCAAAATTGTGACCAGCt                                                                   <  2:1204889/93‑1 (MQ=255)
                            cttccggctcgtatgttgtgtggaattgtgagcggataacaatttcacacaggaaacagctatgTTAAAACGTATCAAAATTGTGACCAGCtt                                                                  <  1:3678806‑M2/29‑1 (MQ=255)
                             ttccggctcgtatgttgtgtggaattgtgagcggataacaatttcacacaggaaacagctatgTTAAAACGTATCAAAATTGTGACCAGCTTa                                                                 >  2:3729243‑M2/64‑93 (MQ=255)
                              cATAAAGTTTTTCCTTTCCAGGCCGAAAATCTTGCATCGGTCCACAGGAAAGAGAAACCATGTTAAAACGTATCAAAATTGTGACCAGCTTAc                                                                >  1:4507544/1‑93 (MQ=255)
                                tAAAGTTTTTCCTTTCCAGGCCGAAAATCTTGCATCGGTCCACAGGAAAGAGAAACCATGTTAAAACGTATCAAAATTGTGACCAGCTTActg                                                              >  2:5071159/1‑93 (MQ=255)
                                    gTTTTTCCTTTCCAGGCCGAAAATCTTGCATCGGTCCACAGGAAAGAGAAACAATGTTAAAACGTATCAAAATTGTGACCAGCTTACTGCTgg                                                          >  1:3199571/1‑93 (MQ=255)
                                     cgtatgttgtgtggaattgtgagcggataacaatttcacacaggaaacagctatgTTAAAACGTATCAAAATTGTGACCAGCTTACTGCTGGt                                                         <  1:7339073‑M2/38‑1 (MQ=255)
                                       tttcctttccAGGCCGAAAATCTTGCATCGGTCCACAGGAAAGAGAAACCATGTTAAAACGTATCAAAATTGTGACCAGCTTACTGCTGGttt                                                       >  2:2702738/1‑93 (MQ=255)
                                       tatgttgtgtggaattgtgagcggataacaatttcacacaggaaacagctatgTTAAAACGTATCAAAATTGTGACCAGCTTACTGCTGGttt                                                       >  2:710364‑M2/54‑93 (MQ=255)
                                       tatgttgtgtggaattgtgagcggataacaatttcacacaggaaacagctatgTTAAAACGTATCAAAATTGTGACCAGCTTACTGCTGGttt                                                       >  1:1813445‑M2/54‑93 (MQ=255)
                                         tgttgtgtggaattgtgagcggataacaatttcacacaggaaacagctatgTTAAAACGTATCAAAATTGTGACGAGCTTACTGCTGGTTTTg                                                     <  1:6117296‑M2/42‑1 (MQ=255)
                                         tgttgtgtggaattgtgagcggataacaatttcacacaggaaacagctatgTTAAAACGTATCAAAATTGTGACCAGCTTACTGCTGGTTTTg                                                     <  1:46702‑M2/42‑1 (MQ=255)
                                         tcctttccAGGCCGAAAATCTTGCATCGGTCCACAGGAAAGAGAAACCATGTTAAAACGTATCAAAATTGTGACCAGCTTACTGCTGGTTTTg                                                     <  2:5690058/93‑1 (MQ=255)
                                         tcctttccAGGCCGAAAATCTTGCATCGGTCCACAGGAAAGAGAAACCATGTTAAAACGTATCAAAATTGTGACCAGCTTACTGCTGGTTTTg                                                     >  1:4535643/1‑93 (MQ=255)
                                           ctttccAGGCCGAAAATCTTGCATCGGTCCACAGGAAAGAGAAACCATGTTAAAACGTATCAAAATTGTGACCAGCTTACTGCTGGTTTTGGc                                                   >  1:1697597/1‑93 (MQ=255)
                                            tttccAGGCCGAAAATCTTGCATCGGTCCACAGGAAAGAGAAACCATGTTAAAACGTATCAAAATTGTGACCAGCTTACTGCTGGTTTTGGcc                                                  >  2:6766331/1‑93 (MQ=255)
                                             gtgtggaattgtgagcggataacaatttcacacaggaaacagctatgTTAAAACGTATCAAAATTGTGACCAGCTTACTGCTGGTTTTGGCCg                                                 <  1:4392875‑M2/46‑1 (MQ=255)
                                              tccAGGCCGAAAATCTTGCATCGGTCCACAGGAAAGAGAAACCATGTTAAAACGTATCAAAATTGTGACCAGCTTACTGCTGGTTTTGGCCGt                                                >  2:2852419/1‑93 (MQ=255)
                                               gtggaattgtgagcggataacaatttcgcacaggaaacagctatgTTAAAACGTATCAAAATTGTGACCAGCTTACTGCTGGTTTTGGCCGtt                                               >  2:5170302‑M2/46‑93 (MQ=255)
                                               ccAGGCCGAAAATCTTGCATCGGTCCACAGGAAAGAGAAACCATGTTAAAACGTATCAAAATTGTGACCAGCTTACTGCTGGTTTTGGCCGtt                                               <  2:7311900/93‑1 (MQ=255)
                                                cAGGCCGAAAATCTTGCATCGGTCCACAGGAAAGAGAAACCATGTTAAAACGTATCAAAATTGTGACCAGCTTACTGCTGGTTTTGGCCGttt                                              >  2:812348/1‑93 (MQ=255)
                                                 ggaattgtgagcggataacaatttcacacaggaaacagctatgTTAAAACGTATCAAAATTGTGACCAGCTTACTGCTGGTTTTGGCCGtttt                                             <  1:6302320‑M2/50‑1 (MQ=255)
                                                   aattgtgagcggataacaatttcacacaggaaacagctatgTTAAAACGTATCAAAATTGTGACCAGCTTACTGCTGGTTTTGGCCGTTTTTg                                           >  2:3546054‑M2/42‑93 (MQ=255)
                                                    ccGAAAATCTTGCATCGGTCCACAGGAAAGAGAAACCATGTTAAAACGTATCAAAATTGTGACCAGCTTACTGCTGGTTTTGGCCGTTTTTgg                                          >  2:7046221/1‑93 (MQ=255)
                                                     ttgtgagcggataacaatttcacacaggaaacagctatgTTAAAACGTATCAAAATTGTGACCAGCTTACTGCTGGTTTTGGCCGTTTttgcc                                         >  2:1882869‑M2/40‑91 (MQ=255)
                                                       aaaaTCTTGCATCGGTCCACAGGAAAGAGAAACCATGTTAAAACGTATCAAAATTGTGACCAGCTTACTGCTGGTTTTGGCCGTTTTTGGCCt                                       >  2:406213/1‑93 (MQ=255)
                                                        tgagcggataacaatttcacacaggaaacagctatgTTAAAACGTATCAAAATTGTGACCAGCTTACTGCTGGTTTTGGCCGTTTTTGGCCtt                                      <  1:3769742‑M2/57‑1 (MQ=255)
                                                         aaTCTTGCATCGGTCCACAGGAAAGAGAAACCATGTTAAAACGTATCAAAATTGTGACCAGCTTACTGCTGGTTTTGGCCGTTTTTGGCCttt                                     >  1:1054820/1‑93 (MQ=255)
                                                            cTTGCATCGGTCCACAGGAAAGAGAAACCATGTTAAAACGTATCAAAATTGTGACCAGCTTACTGCTGGTTTTGGCCGTTTTTGGCCTTTTAc                                  <  2:4845093/93‑1 (MQ=255)
                                                              tGCATCGGTCCACAGGAAAGAGAAACCATGTTAAAACGTATCAAAATTGTGACCAGCTTACTGCTGGTTTTGGCCGTTTTTGGCCTTTTACaa                                <  1:2318615/93‑1 (MQ=255)
                                                               gCATCGGTCCACAGGAAAGAGAAACCATGTTAAAACGTATCAAAATTGTGACCAGCTTACTGCTGGTTTTGGCCGTTTTTGGCCTTTTACAAc                               >  2:4207805/1‑93 (MQ=255)
                                                               ataacaatttcacacaggaaacagctatgTTAAAACGTATCAAAATTGTGACCAGCTTACTGCTGGTTTTGGCCGTTTTTGGCCTTTTACAAc                               <  1:6641704‑M2/64‑1 (MQ=255)
                                                               ataacaatttcacacaggaaacagctatgTTAAAACGTATCAAAATTGTGACCAGCTTACTGCTGGTTTTGGCCGTTTTTGGCCTTTTACAAc                               <  1:6987122‑M2/64‑1 (MQ=255)
                                                                 aacaatttcacacaggaaacagctatgTTAAAACGTATCAAAATTGTGACCAGCTTACTGCTGGTTTTGGCCGTTTTTGGCCTTTTACAACTg                             >  1:1548779‑M2/28‑93 (MQ=255)
                                                                 aTCGGTCCACAGGAAAGAGAAACCATGGTAAAACGTATCAAAATTGTGACCAGCTTACTGCTGGTTTTGGCCGTTTTTGGCCTTTTACAACTg                             >  2:6417395/1‑93 (MQ=255)
                                                                  acaatttcacacaggaaacagctatgTTAAAACGTATCAAAATTGTGACCAGCTTACTGCTGGTTTTGGCCGTTTTTGGCCTTTTACAACTGa                            <  2:7183102‑M2/67‑1 (MQ=255)
                                                                      tCCACAGGAAAGAGAAACCATGTTAAAACGTATCAAAATTGTGACCAGCTTACTGCTGGTTTTGGCCGTTTTTGGCCTTTTACAACTGACATc                        >  2:6103185/1‑93 (MQ=255)
                                                                       ttcacacaggaaacagctatgTTAAAACGTATCAAAATTGTGACCAGCTTACTGCTGGTTTTGGCCGTTTTTGGCCTTTTACAACTGACATCa                       <  1:4878933‑M2/72‑1 (MQ=255)
                                                                       ttcacacaggaaacagctatgTTAAAACGTATCAAAATTGTGACCAGCTTACTGCTGGTTTTGGCCGTTTTTGGCCTTTTACAACTGACATCa                       <  2:496334‑M2/72‑1 (MQ=255)
                                                                       ttcacacaggaaacagctatgTTAAAACGTATCAAAATTGTGACCAGCTTACTGCTGGTTTTGGCCGTTTTTGGCCTTTTACAACTGACATCa                       <  2:3458302‑M2/72‑1 (MQ=255)
                                                                         acaGGAAAGAGAAACCATGTTAAAACGTATCAAAATTGTGACCAGCTTACTGCTGGTTTTGGCCGTTTTTGGCCTTTTACAACTGACATCAgg                     >  1:7396069/1‑93 (MQ=255)
                                                                          caGGAAAGAGAAACCATGTTAAAACGTATCAAAATTGTGACCAGCTTACTGCTGGTTTTGGCCGTTTTTGGCCTTTTACAACTGACATCAGGc                    >  2:2574764/1‑93 (MQ=255)
                                                                          caGGAAAGAGAAACCATGTTAAAACGTATCAAAATTGTGACCAGCTTACTGCTGGTTTTGGCCGTTTTTGGCCTTTTACAACTGACATCAGGc                    <  1:244928/93‑1 (MQ=255)
                                                                          acacaggaaacagctatgTTAAAACGTATCAAAATTGTGACCAGCTTACTGCTGGTTTTGGCCGTTTTTGGCCTTTTACAACTGACATCAGGc                    <  1:5090345‑M2/75‑1 (MQ=255)
                                                                           aGGAAAGAGAAACCATGTTAAAACGTATCAAAATTGTGACCAGCTTACTGCTGGTTTTGGCCGTTTTTGGCCTTTTACAACTGACATCAGGCg                   <  1:3935023/93‑1 (MQ=255)
                                                                             caggaaacagctatgTTAAAACGTATCAAAATTGTGACCAGCTTACTGCTGGTTTTGGCCGTTTTTGGCCTTTTACAACTGACATCAGGCGGt                 >  2:5950446‑M2/16‑93 (MQ=255)
                                                                              aggaaacagctatgTTAAAACGTATCAAAATTGTGACCAGCTTACTGCTGGTTTTGGCCGTTTTTGGCCTTTTACAACTGACATCAGGCGGTc                <  2:3410383‑M2/79‑1 (MQ=255)
                                                                              aaaGAGAAACCATGTTAAAACGTATCAAAATTGTGACCAGCTTACTGCTGGTTTTGGCCGTTTTTGGCCTTTTACAACTGACATCAGGCGGTc                >  1:2208347/1‑93 (MQ=255)
                                                                               ggaaacagctatgTTAAAACGTATCAAAATTGTGACCAGCTTACTGCTGGTTTTGGCCGTTTTTGGCCTTTTACAACTGACATCAGGCGGTCt               <  1:5849646‑M2/80‑1 (MQ=255)
                                                                               aaGAGAAACCATGTTAAAACGTATCAAAATTGTGACCAGCTTACTGCTGGTTTTGGCCGTTTTTGGCCTTTTACAACTGACATCAGGCGGTCt               >  1:2926498/1‑93 (MQ=255)
                                                                                 gagaAACCATGTTAAAACGTATCAAAATTGTGACCAGCTTACTGCTGGTTTTGGCCGTTTTTGGCCTTTTACAACTGACATCAGGCGGTCTGt             >  1:1368635/1‑93 (MQ=255)
                                                                                  aacagctatgTTAAAACGTATCAAAATTGTGACCAGCTTACTGCTGGTTTTGGCCGTTTTTGGCCTTTTACAACTGACATCAGGCGGTCTGtt            >  1:6911868‑M2/11‑93 (MQ=255)
                                                                                   gaAACCATGTTAAAACGTATCAAAATTGTGACCAGCTTACTGCTGGTTTTGGCCGTTTTTGGCCTTTTACAACTGACATCAGGCGGTCTGTTc           <  2:448642/93‑1 (MQ=255)
                                                                                   acagctatgTTAAAACGTATCAAAATTGTGACCAGCTTACTGCTGGTTTTGGCCGTTTTTGGCCTTTTACAACTGACATCAGGCGGTCTGTTc           >  1:5954363‑M2/10‑93 (MQ=255)
                                                                                   acagctatgTTAAAACGTATCAAAATTGTGACCAGCTTACTGCTGGTTTTGGCCGTTTTTGGCCTTTTACAACTGACATCAGGCGGTCTGTTc           >  2:4645731‑M2/10‑93 (MQ=255)
                                                                                     agctatgTTAAAACGTATCAAAATTGTGACCAGCTTACTGCTGGTTTTGGCCGTTTTTGGCCTTTTACAACTGACATCAGGCGGTCTGTTCtt         <  1:2673789‑M2/86‑1 (MQ=255)
                                                                                      gctatgTTAAAACGTATCAAAATTGTGACCAGCTTACTGCTGGTTTTGGCCGTTTTTGGCCTTTTACAACTGACATCAGGCGGTCTGTTCttt        >  1:5368065‑M2/7‑93 (MQ=255)
                                                                                      aCCATGTTAAAACGTATCAAAATTGTGACCAGCTTACTGCTGGTTTTGGCCGTTTTTGGCCTTTTACAACTGACATCAGGCGGTCTGTTCttt        >  2:3048558/1‑93 (MQ=255)
                                                                                       ctatgTTAAAACGTATCAAAATTGTGACCAGCTTACTGCTGGTTTTGGCCGTTTTTGGCCTTTTACAACTGACATCAGGCGGTCTGTTCTTTa       >  1:3421970‑M2/6‑93 (MQ=255)
                                                                                       ccATGTTAAAACGTATCAAAATTGTGACCAGCTTACTGCTGGTTTTGGCCGTTTTTGGCCTTTTACAACTGACATCAGGCGGTCTGTTCTTTa       >  2:5306846/1‑93 (MQ=255)
                                                                                       ccATGTTAAAACGTATCAAAATTGTGACCAGCTTACTGCTGGTTTTGGCCGTTTTTGGCCTTTTACAACTGACATCAGGCGGTCTGTTCTTTa       <  2:62199/93‑1 (MQ=255)
                                                                                        tatgTTAAAACGTATCAAAATTGTGACCAGCTTACTGCTGGTTTTGGCCGTTTTTGGCCTTTTACAACTGACATCAGGCGGTCTGTTCTTTaa      <  1:2751452‑M2/89‑1 (MQ=255)
                                                                                        cATGTTAAAACGTATCAAAATTGTGACCAGCTTACTGCTGGTTTTGGCCGTTTTTGGCCTTTTACAACTGACATCAGGCGGTCTGTTCTTTaa      <  1:67696/93‑1 (MQ=255)
                                                                                        cATGTTAAAACGTATCAAAATTGTGACCAGCTTACTGCTGGTTTTGGCCGTTTTTGGCCTTTTACAACTGACATCAGGCGGTCTGTTCTTTaa      >  2:4588330/1‑93 (MQ=255)
                                                                                         atgTTAAAACGTATCAAAATTGTGACCAGCTTACTGCTGGTTTTGGCCGTTTTTGGCCTTTTACAACTGACATCAGGCGGTCTGTTCTTTAAt     <  2:6710522‑M2/90‑1 (MQ=255)
                                                                                         atgTTAAAACGTATCAAAATTGTGACCAGCTTACTGCTGGTTTTGGCCGTTTTTGGCCTTTTACAACTGACATCAGGCGGTCTGTTCTTTAAt     <  2:1752311‑M2/90‑1 (MQ=255)
                                                                                         atgTTAAAACGTATCAAAATTGTGACCAGCTTACTGCTGGTTTTGGCCGTTTTTGGCCTTTTACAACTGACATCAGGCGGTCTGTTCTTTAAt     >  2:4446017‑M2/4‑93 (MQ=255)
                                                                                          tgTTAAAACGTATCAAAATTGTGACCAGCTTACTGCTGGTTTTGGCCGTTTTTGGCCTTTTACAACTGACATCAGGCGGTCTGTTCTTTAATg    >  1:7192114‑M2/3‑93 (MQ=255)
                                                                                            ttAAAACGTATCAAAATTGTGACCAGCTTACTGCTGGTTTTGGCCGTTTTTGGCCTTTTACAACTGACATCAGGCGGTCTGTTCTTTAATGcc  >  2:2455988/1‑93 (MQ=255)
                                                                                            |                                                                                            
ATTCACTCGGCGTAATCTCCGCGGGATATTCATAAAGTTTTTCCTTTCCAGGCCGAAAATCTTGCATCGGTCCACAGGAAAGAGAAACCATGTTAAAACGTATCAAAATTGTGACCAGCTTACTGCTGGTTTTGGCCGTTTTTGGCCTTTTACAACTGACATCAGGCGGTCTGTTCTTTAATGCC  >  NC_000913/4589138‑4589322

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 26 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.