| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | 1197677 = | 208 (0.680) | 6 (0.030) | 6/144 | 12.8 | 3.2% | intergenic (‑217/‑241) | ymfE/lit | hypothetical protein/Lit |
| ? | NC_000913 | = 1197708 | 206 (0.860) | intergenic (‑248/‑210) | ymfE/lit | hypothetical protein/Lit | |||||
| Rejected: Coverage evenness skew score above cutoff. | |||||||||||
| Rejected: Frequency below/above cutoff threshold. | |||||||||||
ACTGGGAACGATTAAGGTAAGCATGTCGTAAGACACCATCCGTGCCCACTGGACACTCTGTCATCATTTCATCATTTCATCATTTCATCATTTCATCATTTCATCATTTCAT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_000913/1197788‑1197677‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tcatcatttcatcatttcatCATTTCATCATTTCATCATTTCATCATTTCATTATTTCATTATTTCATTTCTATCAATTTCAGATTCTCACCCAGCGTCAAATTTGTAGCGC < NC_000913/1197708‑1197617 ACTGGGAACGATTAAGGTAAGCATGTCGTAAGACACCATCCGTGCCCACTGGACACTCTGTCATCATTTCATCATTTCATCATTTCATCATTT < 2:7923532/93‑1ACTGGGAACGATTAAGGTAAGCATGTCGTAAGACACCATCCGTGCCCACTGGACACTCTGTCATCATTTCATCATTTCATCATTTCATCATTT < 2:3499515/93‑1ACTGGGAACGATTAAGGTAAGCATGTCGTAAGACACCATCCGTGCCCACTGGACACTCTGTCATCATTTCATCATTTCATCATTTCATCATTT > 2:5347981/1‑93ACTGGGAACGATTAAGGTAAGCATGTCGTAAGACACCATCCGTGCCCACTGGACACTCTGTCATCATTTCATCATTTCATCATTTCATCATTT < 1:3698723/93‑1ACTGGGAACGATTAAGGTAAGCATGTCGTAAGACACCATCCGTGCCCACTGGACACTCTGTCATCATTTCATCATTTCATCATTTCATCATTT > 2:2291013/1‑93 CTGGGAACGATTAAGGTAAGCATGTCGTAAGACACCATCCGTGCCCACTGGACACTCTGTCATCATTTCATCATTTCATCATTTCATCATTTC < 2:2615227/93‑1 CTGGGAACGATTAAGGTAAGCATGTCGTAAGACACCATCCGTGCCCACTGGACACTCTGTCATCATTTCATCATTTCATCATTTCATCATTTC > 2:2425037/1‑93 CTGGGAACGATTAAGGTAAGCATGTCGTAAGACACCATCCGTGCCCACTGGACACTCTGTCATCATTTCATCATTTCATCATTTCATCATTTC > 1:4615168/1‑93 CTGGGAACGATTAAGGTAAGCATGTCGTAAGACACCATCCGTGCCCACTGGACACTCTGTCATCATTTCATCATTTCATCATTTCATCATTTC < 1:3029703/93‑1 TGGGAACGATTAAGGTAAGCATGTCGTAAGACACCATCCGTGCCCACTGGACACTCTGTCATCATTTCATCATTTCATCATTTCATCATTTCA > 1:4072475/1‑93 TGGGAACGATTAAGGTAAGCATGTCGTAAGACACCATCCGTGCCCACTGGACACTCTGTCATCATTTCATCATTTCATCATTTCATCATTTCA > 1:3270017/1‑93 TGGGAACGATTAAGGTAAGCATGTCGTAAGACACCATCCGTGCCCACTGGACACTCTGTCATCATTTCATCATTTCATCATTTCATCATTTCA > 2:2620772/1‑93 GGGAACGATTAAGGTAAGCATGTCGTAAGACACCATCCGTGCCCACTGGACACTCTGTCATCATTTCATCATTTCATCATTTCATCATTTCAT < 2:3562304/93‑1 GGAACGATTAAGGTAAGCATGTCGTAAGACGCCATCCGTGCCCACTGGACACTCTGTCATCATTTCATCATTTCATCATTTCATCATTTCATC < 2:7730444/93‑1 GAACGATTAAGGTAAGCATGTCGTAAGACACCATCCGTGCCCACTGGACACTCTGTCATCATTTCATCATTTCATCATTTCATCATTTCATCA > 1:6851841/1‑93 GAACGATTAAGGTAAGCATGTCGTAAGACACCATCCGTGCCCACTGGACACTCTGTCATCATTTCATCATTTCATCATTTCATCATTTCATCA < 1:467082/93‑1 ACGATTAAGGTAAGCATGTCGTAAGACACCATCCGTGCCCACTGGACACTCTGTCATCATTTCATCATTTCATCATTTCATCATTTCATCATT < 2:988418/93‑1 ACGATTAAGGTAAGCATGTCGTAAGACACCATCCGTGCCCACTGGACACTCTGTCATCATTTCATCATTTCATCATTTCATCATTTCATCATT > 2:3839347/1‑93 GATTAAGGTAAGCATGTCGTAAGACACCATCCGTGCCCACTGGACACTCTGTCATCATTTCATCATTTCATCATTTCATCATTTCATCATTTC < 2:4906008/93‑1 GATTAAGGTAAGCATGTCGTAAGACACCATCCGTGCCCACTGGACACTCTGTCATCATTTCATCATTTCATCATTTCATCATTTCATCATTTC > 2:5713738/1‑93 GATTAAGGTAAGCATGTCGTAAGACACCATCCGTGCCCACTGGACACTCTGTCATCATTTCATCATTTCATCATTTCATCATTTCATCATTTC > 1:6306168/1‑93 ATTAAGGTAAGCATGTCGTAAGACACCCTCCGTGCCCACTGGACACTCTGTCATCATTTCATCATTTCATCATTTCATCATTTCATCATTTta > 2:2649330/1‑91 ATTAAGGTAAGCATGTCGTAAGACACCATCCGTGCCCACTGGACACTCTGTCATCATTTCATCATTTCATCATTTCATCATTTCATCATTTCA > 1:3703566/1‑93 ATTAAGGTAAGCATGTCGTAAGACACCATCCGTGCCCACTGGACACTCTGTCATCATTTCATCATTTCATCATTTCATCATTTCATCATTTCA < 1:346063/93‑1 ATTAAGGTAAGCATGTCGTAAGACACCATCCGTGCCCACTGGACACTCTGTCATCATTTCATCATTTCATCATTTCATCATTTCATCATTTCA > 1:2287858/1‑93 ATTAAGGTAAGCATGTCGTAAGACACCATCCGTGCCCACTGGACACTCTGTCATCATTTCATCATTTCATCATTTCATCATTTCATCATTTCA < 1:6308404/93‑1 ATTAAGGTAAGCATGTCGTAAGACACCATCCGTGCCCACTGGACACTCTGTCATCATTTCATCATTTCATCATTTCATCATTTCATCATTTCA > 2:2649332/1‑93 TTAAGGTAAGCATGTCGTAAGACACCATCCGTGCCCACTGGACACTCTGTCATCATTTCATCATTTCATCATTTCATCATTTCATCATTTCAT < 2:6737315/93‑1 TAAGGTAAGCATGTCGTAAGACACCATCCGTGCCCACTGGACACTCTGTCATCATTTCATCATTTCATCATTTCATCATTTCATCATTTCATC < 2:1995257/93‑1 TAAGGTAAGCATGTCGTAAGACACCATCCGTGCCCACTGGACACTCTGTCATCATTTCATCATTTCATCATTTCATCATTTCATCATTTCATC < 1:6222097/93‑1 TAAGGTAAGCATGTCGTAAGACACCATCCGTGCCCACTGGACACTCTGTCATCATTTCATCATTTCATCATTTCATCATTTCATCATTTCATC < 2:2795637/93‑1 TAAGGTAAGCATGTCGTAAGACACCATCCGTGCCCACTGGACACTCTGTCATCATTTCATCATTTCATCATTTCATCATTTCATCATTTCATC < 2:6923677/93‑1 TAAGGTAAGCATGTCGTAAGACACCATCCGTGCCCACTGGACACTCTGTCATCATTTCATCATTTCATCATTTCATCATTTCATCATTTCATC < 2:475843/93‑1 AAGGTAAGCATGTCGTAAGACACCATCCGTGCCCACTGGACACTCTGTCATCATTTCATCATTTCATCATTTCATCATTTCATCATTTCATCA < 2:1431148/93‑1 AGGTAAGCATGTCGTAAGACACCATCCGTGCCCACTGGACACTCTGTCATCATTTCATCATTTCATCATTTCATCATTTCATCATTTCATCAT < 2:3014246/93‑1 AGGTAAGCATGTCGTAAGACACCATCCGTGCCCACTGGACACTCTGTCATCATTTCATCATTTCATCATTTCATCATTTCATCATTTCATCAT < 1:3964763/93‑1 aGTAAGCATGTCGTAAGACACCATCCGTGCCCACTGGACACTCTGTCATCATTTCATCATTTCATCATTTCATCATTTCATCATTTCATCATT < 1:4587539/92‑1 GTAAGCATGTCGTAAGACACCATCCGTGCCCACTGGACACTCTGTCATCATTTCATCATTTCATCATTTCATCATTTCATCATTTCATCATTT < 2:7361289/93‑1 GTAAGCATGTCGTAAGACACCATCCGTGCCCACTGGACACTCTGTCATCATTTCATCATTTCATCATTTCATCATTTCATCATTTCATCATTT < 2:1235832/93‑1 TAAGCATGTCGTAAGACACCATCCGTGCCCACTGGACACTCTGTCATCATTTCATCATTTCATCATTTCATCATTTCATCATTTCATCATTTC > 2:2982182/1‑93 TAAGCATGTCGTAAGACACCATCCGTGCCCACTGGACACTCTGTCATCATTTCATCATTTCATCATTTCATCATTTCATCATTTCATCATTTC < 2:4628582/93‑1 TAAGCATGTCGTAAGACACCATCCGTGCCCACTGGACACTCTGTCATCATTTCATCATTTCATCATTTCATCATTTCATCATTTCATCATTTC < 1:746351/93‑1 TAAGCATGTCGTAAGACACCATCCGTGCCCACTGGACACTCTGTCATCATTTCATCATTTCATCATTTCATCATTTCATCATTTCATCATTTC > 2:1940736/1‑93 AAGCATGTCGTAAGACACCATCCGTGCCCACTGGACACTCTGTCATCATTTCATCATTTGATCATTTCATCATTTCATAATTTCATCATTTCA > 1:7901024/1‑93 AAGCATGTCGTAAGACACCATCCGTGCCCACTGGACACTCTGTCATCATTTCATCATTTCATCATTTCATCATTTCATCATTTCATCATTTCA < 2:6538224/93‑1 AAGCATGTCGTAAGACACCATCCGTGCCCACTGGACACTCTGTCATCATTTCATCATTTCATCATTTCATCATTTCATCATTTCATCATTTCA < 2:3208721/93‑1 AGCATGTCGTAAGACACCATCCGTGCCCACTGGACACTCTGTCATCATTTCATCATTTCATCATTTCATCATTTCATCATTTCATCATTTCAT > 1:7676452/1‑93 AGCATGTCGTAAGACACCATCCGTGCCCACTGGACACTCTGTCATCATTTCATCATTTCATCATTTCATCATTTCATCATTTCATCATTTCAT > 1:4903873/1‑93 TGTCGTAAGACACCATCCGTGCCCACTGGACACTCTGTCATCATTTCATCATTTCATCATTTCATCATTTCATCATTTCATCATTTCATCATT < 2:3481301/93‑1 AAGACACCATCCGTGCCCACTGGACACTCTGTCATCATTTCATCATTTCATCATTTCATCATTTCATCATTTCATCATTTCATCATTTCATCA < 2:5797357/93‑1 TCCGTGCCCACTGGACACTCTGTCATCATTTCATCATTTCATCATTTCATCATTTCATCATTTCATCATTTCATCATTTCATCATTTCATCAT > 2:2186326/1‑93 ctgTCATCATTTCATCATTTCATCATTTCATCATTTCATCATTTCATCATTTCATCATTTCATCATTTCATCATTTCATTATTTCATTATTTC < 1:4373788/90‑1 CATTTCATCATTTCATCATTTCATCATTTCATCATTTCATCATTTCATCATTTCATCATTTCATCATTTCATTATTTCATTATTTCATTTCTA > 1:2309016/1‑93 TTTCATCATTTCATCATTTCATCATTTCATCATTTCATCATTTCATCATTTCATCATTTCATTATTTCATTATTTCATTTCTATCAATTTCAG > 2:3644475/1‑93 TCATCATTTCATCATTTCATCATTTCATCATTTCATCATTTCATCATTTCATTATTTCATTATTTCATTTCTATCAATTTCAGATTCTCACCC < 1:4997468/93‑1 TCATCATTTCATCATTTCATCATTTCATCATTTCATCATTTCATCATTTCATTATTTCATTATTTCATTTCTATCAATTTCAGATTCTCACCC < 2:622091/93‑1 TCATCATTTCATCATTTCATCATTTCATCATTTCATCATTTCATCATTTCATTATTTCATTATTTCATTTCTATCAATTTCAGATTCTCACCC > 2:5169181/1‑93 tATCATTTCATCATTTCATCATTTCATCATTTCATCATTTCATCATTTCATTATTTCATTATTTCATTTCTATCAATTTCAGATTCTCACCCA < 1:6319995/92‑1 CATCATTTCATCATTTCATCATTTCATCATTTCATCATTTCATCATTTCATTATTTCATTATTTCATTTCTATCAATTTCAGATTCTCACCCA < 2:7462961/93‑1 CATCATTTCATCATTTCATCATTTCATCATTTCATCATTTCATCATTTCATTATTTCATTATTTCATTTCTATCAATTTCAGATTCTCACCCA > 2:7494468/1‑93 ATCATTTCATCATTTCATCATTTCATCATTTCATCATTTCATCATTTCATTATTTCATTATTTCATTTCTATCAATTTCAGATTCTCACCCAG < 2:6254378/93‑1 TCATTTCATCATTTCATCATTTCATCATTTCATCATTTCATCATTTCATTATTTCATTATTTCATTTCTATCAATTTCAGATTCTCACCCAGC > 1:1585885/1‑93 TCATTTCATCATTTCATCATTTCATCATTTCATCATTTCATCATTTCATTATTTCATTATTTCATTTCTATCAATTTCAGATTCTCACCCAGC > 1:6598822/1‑93 ATTTCATCATTTCATCATTTCATCATTTCATCATTTCATCATTTCATTATTTCATTATTTCATTTCTATCAATTTCAGATTCTCACCCAGCGT > 1:3915712/1‑93 ATTTCATCATTTCATCATTTCATCATTTCATCATTTCATCATTTCATTATTTCATTATTTCATTTCTATCAATTTCAGATTCTCACCCAGCGT > 1:4043787/1‑93 TTTCATCATTTCATCATTTCATCATTTCATCATTTCATCATTTCATTATTTCATTATTTCATTTCTATCAATTTCAGATTCTCACCCAGCGTC < 2:2057920/93‑1 TCATCATTTCATCATTTCATCATTTCATCATTTCATCATTTCATTATTTCATTATTTCATTTCTATCAATTTCAGATTCTCACCCAGCGTCAA > 1:1212505/1‑93 CATCATTTCATCATTTCATCATTTCATCATTTCATCATTTCATTATTTCATTATTTCATTTCTATCAATTTCAGATTCTCACCCAGCGTCAAA < 2:4133112/93‑1 CATCATTTCATCATTTCATCATTTCATCATTTCATCATTTCATTATTTCATTATTTCATTTCTATCAATTTCAGATTCTCACCCAGCGTCAAA > 2:3621358/1‑93 CATCATTTCATCATTTCATCATTTCATCATTTCATCATTTCATTATTTCATTATTTCATTTCTATCAATTTCAGATTCTCACCCAGCGTCAAA < 2:685057/93‑1 ATCATTTCATCATTTCATCATTTCATCATTTCATCATTTCATTATTTCATTATTTCATTTCTATCAATTTCAGATTCTCACCCAGCGTCAAAT < 2:4200046/93‑1 ATCATTTCATCATTTCATCATTTCATCATTTCATCATTTCATTATTTCATTATTTCATTTCTATCAATTTCAGATTCTCACCCAGCGTCAAAT > 1:2351466/1‑93 ATCATTTCATCATTTCATCATTTCATCATTTCATCATTTCATTATTTCATTATTTCATTTCTATCAATTTCAGATTCTCACCCAGCGTCAAAT > 1:2351468/1‑93 TCATTTCATCATTTCATCATTTCATCATTTCATCATTTCATTATTTCATTATTTCATTTCTATCAATTTCAGATTCTCACCCAGCGTCAAATT < 2:3220407/93‑1 TCATTTCATCATTTCATCATTTCATCATTTCATCATTTCATTATTTCATTATTTCATTTCTATCAATTTCAGATTCTCACCCAGCGTCAAATT > 2:7053185/1‑93 CATTTCATCATTTCATCATTTCATCATTTCATCATTTCATTATTTCATTATTTCATTTCTATCAATTTCAGATTCTCACCCAGCGTCAAATTT < 2:6118917/93‑1 CATTTCATCATTTCATCATTTCATCATTTCATCATTTCATTATTTCATTATTTCATTTCTATCAATTTCAGATTCTCACCCAGCGTCAAATTT < 2:4985057/93‑1 ATTTCATCATTTCATCATTTCATCATTTCATCATTTCATTATTTCATTATTTCATTTCTATCAATTTCAGATTCTCACCCAGCGTCAAATTTG > 1:5753170/1‑93 ATTTCATCATTTCATCATTTCATCATTTCATCATTTCATTATTTCATTATTTCATTTCTATCAATTTCAGATTCTCACCCAGCGTCAAATTTG > 2:4882508/1‑93 TTTCATCATTTCATCATTTCATCATTTCATCATTTCATTATTTCATTATTTCATTTCTATCAATTTCAGATTCTCACCCAGCGTCAAATTTGT > 2:5680818/1‑93 TTTCATCATTTCATCATTTCATCATTTCATCATTTCATTATTTCATTATTTCATTTCTATCAATTTCAGATTCTCACCCAGCGTCAAATTTGT < 1:1996015/93‑1 TTCATCATTTCATCATTTCATCATTTCATCATTTCATTATTTCATTATTTCATTTCTATCAATTTCAGATTCTCACCCAGCGTCAAATTTGTA > 1:5876606/1‑93 TTCATCATTTCATCATTTCATCATTTCATCATTTCATTATTTCATTATTTCATTTCTATCAATTTCAGATTCTCACCCAGCGTCAAATTTGTA > 2:761430/1‑93 TTCATCATTTCATCATTTCATCATTTCATCATTTCATTATTTCATTATTTCATTTCTATCAATTTCAGATTCTCACCCAGCGTCAAATTTGTA < 2:4811206/93‑1 TTCATCATTTCATCATTTCATCATTTCATCATTTCATTATTTCATTATTTCATTTCTATCAATTTCAGATTCTCACCCAGCGTCAAATTTGTA < 1:2186327/93‑1 TCATCATTTCATCATTTCATCATTTCATCATTTCATTATTTCATTATTTCATTTCTATCAATTTCAGATTCTCACCCAGCGTCAAATTTGTAG < 2:2580419/93‑1 CATCATTTCATCATTTCATCATTTCATCATTTCATTATTTCATTATTTCATTTCTATCAATTTCAGATTCTCTCCCAGCGTCAAATTTGTAGC < 2:391210/93‑1 CATCATTTCATCATTTCATCATTTCATCATTTCATTATTTCATTATTTCATTTCTATCAATTTCAGATTCTCACCCAGCGTCAAATTTGTAGC > 2:475809/1‑93 CATCATTTCATCATTTCATCATTTCATCATTTCATTATTTCATTATTTCATTTCTATCAATTTCAGATTCTCACCCAGCGTCAAATTTGTAGC > 1:5014584/1‑93 CATCATTTCATCATTTCATCATTTCATCATTTCATTATTTCATTATTTCATTTCTATCAATTTCAGATTCTCACCCAGCGTCAAATTTGTAGC < 1:1746672/93‑1 TCATTTCATCATTTCATCATTTCATCATTTCATTATTTCATTATTTCATTTCTATCAATTTCAGATTCTCACCCAGCGTCAAATTTGTAGCGC > 1:4088111/1‑93 ACTGGGAACGATTAAGGTAAGCATGTCGTAAGACACCATCCGTGCCCACTGGACACTCTGTCATCATTTCATCATTTCATCATTTCATCATTTCATCATTTCATCATTTCAT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_000913/1197788‑1197677‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tcatcatttcatcatttcatCATTTCATCATTTCATCATTTCATCATTTCATTATTTCATTATTTCATTTCTATCAATTTCAGATTCTCACCCAGCGTCAAATTTGTAGCGC < NC_000913/1197708‑1197617 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 29 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |