BRESEQ :: Evidence

New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_000913	1197677 =	208 (0.680)	6 (0.030)	6/144	12.8	3.2%	intergenic (‑217/‑241)	ymfE/lit	hypothetical protein/Lit
*	?	NC_000913	= 1197708	206 (0.860)	6 (0.030)	6/144	12.8	3.2%	intergenic (‑248/‑210)	ymfE/lit	hypothetical protein/Lit
Rejected: Coverage evenness skew score above cutoff.
Rejected: Frequency below/above cutoff threshold.

Only 100 of 213 total aligned reads displayed.

TTGTGATCAGTAGCACGTATCGAGGAGGAGTAGCGCTACAAATTTGACGCTGGGTGAGAATCTGAAATTGATAGAAATGAAATAATGAAATAATGAAATGATGAAATGATGAAATGATGAAATGATGAAATGATGAAATGATGACAGAGTGTCCAGTGGGCACGGATGGTGTCTTACGACATGCT  >  NC_000913/1197585‑1197769

 tgtgATCAGTAGCACGTATCGAGGAGGAGTAGCGCTACAAATTTGACGCTGGGTGAGAATCTGAAATTGATAGAaatgaaataatgaaataat                                                                                             <  1:6116776/93‑1 (MQ=255)

    gATCAGTAGCACGTATCGAGGAGGAGTAGCGCTACAAATTTGACGCTGGGTGAGAATCTGAAATTGATAGAaatgaaataatgaaataatgaa                                                                                          >  2:3360418/1‑93 (MQ=255)

     aTCAGTAGCACGTATCGAGGAGGAGTAGCGCTACAAATTTGACGCTGGGTGAGAATCTGAAATTGATAGAaatgaaataatgaaataatgaaa                                                                                         <  2:1376557/93‑1 (MQ=255)

       cAGTAGCACGTATCGAGGAGGAGTAGCGCTACAAATTTGACGCTGGGTGAGAATCTGAAATTGATAGAAATGAAATAATGAAATaatgaaatg                                                                                       <  2:1660642/93‑1 (MQ=255)

         gTAGCACGTATCGAGGAGGAGTAGCGCTACAAATTTGACGCTGGGTGAGAATCTGAAATTGATAGAAATGAAATAATGAAATAatgaaatgat                                                                                     <  2:53812/93‑1 (MQ=255)

           aGCACGTATCGAGGAGGAGTAGCGCTACAAATTTGACGCTGGGTGAGAATCTGAAATTGATAGAAATGAAATAATGAAATAatgaaatgatga                                                                                   <  2:2797899/93‑1 (MQ=255)

             cACGTATCGAGGAGGAGTAGCGCTACAAATTTGACGCTGGGTGAGAATCTGAAATTGATAGAAATGAAATAATGAAATAatgaaatgatgaaa                                                                                 <  1:3362182/93‑1 (MQ=255)

              aCGTATCGAGGAGGAGTAGCGCTACAAATTTGACGCTGGGTGAGAATCTGAAATTGATAGAAATGAAATAATGAAATAatgaaatgatgaaat                                                                                >  2:3732620/1‑93 (MQ=255)

               cGTATCGAGGAGGAGTAGCGCTACAAATTTGACGCTGGGTGAGAATCTGAAATTGATAGAAATGAAATAATGAAATAatgaaatgatgaaatg                                                                               <  1:4793485/93‑1 (MQ=255)

                 tATCGAGGAGGAGTAGCGCTACAAATTTGACGCTGGGTGAGAATCTGAAATTGATAGAAATGAAATAATGAAATAatgaaatgatgaaatgat                                                                             >  2:6851840/1‑93 (MQ=255)

                 tATCGAGGAGGAGTAGCGCTACAAATTTGACGCTGGGTGAGAATCTGAAATTGATAGAAATGAAATAATGAAATAatgaaatgatgaaatgat                                                                             <  2:1845484/93‑1 (MQ=255)

                    cGAGGAGGAGTAGCGCTACAAATTTGACGCTGGGTGAGAATCTGAAATTGATAGAAATGAAATAATGAAATAatgaaatgatgaaatgatgaa                                                                          <  1:1713058/93‑1 (MQ=255)

                     gaggaggagTAGCGCTACAAATTTGACGCTGGGTGAGAATCTGAAATTGATAGAAATGAAATAATGAAATAatgaaatgatgaaatgatgaaa                                                                         <  1:2747777/93‑1 (MQ=255)

                     gaggaggagTAGCGCTACAAATTTGACGCTGGGTGAGAATCTGAAATTGATAGAAATGAAATAATGAAATAatgaaatgatgaaatgatgaaa                                                                         >  2:7339037/1‑93 (MQ=255)

                     gaggaggagTAGCGCTACAAATTTGACGCTGGGTGAGAATCTGAAATTGATAGAAATGAAATAATGAAATAatgaaatgatgaaatgatgaaa                                                                         <  2:566593/93‑1 (MQ=255)

                     gaggaggagTAGCGCTACAAATTTGACGCTGGGTGAGAATCTGAAATTGATAGAAATGAAATAATGAAATAatgaaatgatgaaatgatgaaa                                                                         >  2:5275821/1‑93 (MQ=255)

                      aggaggagTAGCGCTACAAATTTGACGCTGGGTGAGAATCTGAAATTGATAGAAATGAAATAATGAAATAatgaaatgatgaaatgatgaaat                                                                        <  2:2439199/93‑1 (MQ=255)

                       ggaggagTAGCGCTACAAATTTGACGCTGGGTGAGAATCTGAAATTGATAGAAATGAAATAATGAAATAatgaaatgatgaaatgatgaaatg                                                                       <  2:6569575/93‑1 (MQ=255)

                         aggagTAGCGCTACAAATTTGACGCTGGGTGAGAATCTGAAATTGATAGAAATGAAATAATGAAATAatgaaatgatgaaatgatgaaatgat                                                                     <  1:4983214/93‑1 (MQ=255)

                          ggagTAGCGCTACAAATTTGACGCTGGGTGAGAATCTGAAATTGATAGAAATGAAATAATGAAATAatgaaatgatgaaatgatgaaatgatg                                                                    <  2:4551831/93‑1 (MQ=255)

                           gagTAGCGCTACAAATTTGACGCTGGGTGAGAATCTGAAATTGATAGAAATGAAATAATGAAATAatgaaatgatgaaatgatgaaatgatga                                                                   <  1:4210122/93‑1 (MQ=255)

                             gTAGCGCTACAAATTTGACGCTGGGTGAGAATCTGAAATTGATAGAAATGAAATAATGAAATAatgaaatgatgaaatgatgaaatgatgaaa                                                                 <  1:6048930/93‑1 (MQ=255)

                              tAGCGCTACAAATTTGACGCTGGGTGAGAATCTGAAATTGATAGAAATGAAATAATGAAATAatgaaatgatgaaatgatgaaatgatgaaat                                                                >  1:3639179/1‑93 (MQ=255)

                                  gcTACAAATTTGACGCTGGGTGAGAATCTGAAATTGATAGAAATGAAATAATGAAATAatgaaatgatgaaatgatgaaatgatgaaatgatg                                                            <  2:475809/93‑1 (MQ=255)

                                  gcTACAAATTTGACGCTGGGTGAGAATCTGAAATTGATAGAAATGAAATAATGAAATAatgaaatgatgaaatgatgaaatgatgaaatgatg                                                            <  1:5014584/93‑1 (MQ=255)

                                    tACAAATTTGACGCTGGGTGAGAATCTGAAATTGATAGAAATGAAATAATGAAATAatgaaatgatgaaatgatgaaatgatgaaatgatgaa                                                          >  2:4811206/1‑93 (MQ=255)

                                    tACAAATTTGACGCTGGGTGAGAATCTGAAATTGATAGAAATGAAATAATGAAATAatgaaatgatgaaatgatgaaatgatgaaatgatgaa                                                          >  1:2186327/1‑93 (MQ=255)

                                       aaaTTTGACGCTGGGTGAGAATCTGAAATTGATAGAAATGAAATAATGAAATAatgaaatgatgaaatgatgaaatgatgaaatgatgaaatg                                                       >  2:4985057/1‑93 (MQ=255)

                                        aaTTTGACGCTGGGTGAGAATCTGAAATTGATAGAAATGAAATAATGAAATAatgaaatgatgaaatgatgaaatgatgaaatgatgaaatga                                                      >  2:3220407/1‑93 (MQ=255)

                                         aTTTGACGCTGGGTGAGAATCTGAAATTGATAGAAATGAAATAATGAAATAatgaaatgatgaaatgatgaaatgatgaaatgatgaaatgat                                                     <  1:2351468/93‑1 (MQ=255)

                                          tttGACGCTGGGTGAGAATCTGAAATTGATAGAAATGAAATAATGAAATAatgaaatgatgaaatgatgaaatgatgaaatgatgaaatgatg                                                    <  2:3621358/93‑1 (MQ=255)

                                          tttGACGCTGGGTGAGAATCTGAAATTGATAGAAATGAAATAATGAAATAatgaaatgatgaaatgatgaaatgatgaaatgatgaaatgatg                                                    >  2:4133112/1‑93 (MQ=255)

                                           ttGACGCTGGGTGAGAATCTGAAATTGATAGAAATGAAATAATGAAATAatgaaatgatgaaatgatgaaatgatgaaatgatgaaatgatga                                                   <  1:1212505/93‑1 (MQ=255)

                                              aCGCTGGGTGAGAATCTGAAATTGATAGAAATGAAATAATGAAATAatgaaatgatgaaatgatgaaatgatgaaatgatgaaatgatgaaat                                                <  1:4043787/93‑1 (MQ=255)

                                                gCTGGGTGAGAATCTGAAATTGATAGAAATGAAATAATGAAATAAtgaaatgatgaaatgatgaaatgatgaaatgatgaaatgatgaaatga                                              <  1:1585885/93‑1 (MQ=255)

                                                gCTGGGTGAGAATCTGAAATTGATAGAAATGAAATAATGAAATAAtgaaatgatgaaatgatgaaatgatgaaatgatgaaatgatgaaatga                                              <  1:6598822/93‑1 (MQ=255)

                                                 cTGGGTGAGAATCTGAAATTGATAGAAATGAAATAATGAAATAATgaaatgatgaaatgatgaaatgatgaaatgatgaaatgatgaaatgat                                             >  2:6254378/1‑93 (MQ=255)

                                                  tGGGTGAGAATCTGAAATTGATAGAAATGAAATAATGAAATAATgaaatgatgaaatgatgaaatgatgaaatgatgaaatgatgaaatgata                                            >  1:6319995/1‑92 (MQ=255)

                                                  tGGGTGAGAATCTGAAATTGATAGAAATGAAATAATGAAATAATGaaatgatgaaatgatgaaatgatgaaatgatgaaatgatgaaatgatg                                            <  2:7494468/93‑1 (MQ=255)

                                                  tGGGTGAGAATCTGAAATTGATAGAAATGAAATAATGAAATAATGaaatgatgaaatgatgaaatgatgaaatgatgaaatgatgaaatgatg                                            >  2:7462961/1‑93 (MQ=255)

                                                   gggTGAGAATCTGAAATTGATAGAAATGAAATAATGAAATAATGAaatgatgaaatgatgaaatgatgaaatgatgaaatgatgaaatgatga                                           >  2:622091/1‑93 (MQ=255)

                                                     gagagaAGCTGATATTGGTAAAAATTAAATAATAAAATAATGTagtgatgaaatgatcaaatgatgaaatgatcaaatgattaaatgatgaga                                         <  2:6439150/91‑3 (MQ=12)

                                                     gTGAGAATCTGAAATTGATAGAAATGAAATAATGAAATAATGAAATGATGAAATGATGAAATGATGAAATGATGAAATGATGAAATGATGACa                                         <  1:134769/93‑1 (MQ=255)

                                                      tGAGAATCTGAAATTGATAGAAATGAAATAATGAAATAATGAAATGATGAAATGATGAAATGATGAAATGATGAAATGATGAAATGATGACag                                        >  2:4210466/1‑93 (MQ=255)

                                                       gagaATCTGAAATTGATAGAAATGAAATAATGAAATAATGAAATGATGAAATGATGAAATGATGAAATGATGAAATGATGAAATGATGACaga                                       <  2:4010092/93‑1 (MQ=255)

                                                        agaATCTGAAATTGATAGAAATGAAATAATGAAATAATGAAATGATGAAATGATGAAATGATGAAATGATGAAATGATGAAATGATGACagag                                      <  1:817411/93‑1 (MQ=255)

                                                        agaATCTGAAATTGATAGAAATGAAATAATGAAATAATGAAATGATGAAATGATGAAATGATGAAATGATGAAATGATGAAATGATGACagag                                      <  1:2774125/93‑1 (MQ=255)

                                                          aaTCTGAAATTGATAGAAATGAAATAATGAAATAATGAAATGATGAAATGATGAAATGATGAAATGATGAAATGATGAAATGATGACAGAgtg                                    <  2:1600682/93‑1 (MQ=255)

                                                           aTCTGAAATTGATAGAAATGAAATAATGAAATAATGAAATGATGAAATGATGAAATGATGAAATGATGAAATGATGAAATGATGACAGAgtgt                                   >  1:325123/1‑93 (MQ=255)

                                                           aTCTGAAATTGATAGAAATGAAATAATGAAATAATGAAATGATGAAATGATGAAATGATGAAATGATGAAATGATGAAATGATGACAGAgtgt                                   >  1:4372209/1‑93 (MQ=255)

                                                           aTCTGAAATTGATAGAAATGAAATAATGAAATAATGAAATGATGAAATGATGAAATGATGAAATGATGAAATGATGAAATGATGACAGAgtgc                                   >  1:4890234/1‑92 (MQ=255)

                                                            tCTGAAATTGATAGAAATGAAATAATGAAATAATGAAATGATGAAATGATGAAATGATGAAATGATGAAATGATGAAATGATGACAGAGTGTc                                  <  1:1194881/93‑1 (MQ=255)

                                                            tCTGAAATTGATAGAAATGAAATAATGAAATAATGAAATGATGAAATGATGAAATGATGAAATGATGAAATGATGAAATGATGACAGAGTGTc                                  <  1:7336563/93‑1 (MQ=255)

                                                              tGAAATTGATAGAAATGAAATAATGAAATAATGAAATGATGAAATGATGAAATGATGAAATGATGAAATGATGAAATGATGACAGAGTGTCCa                                <  1:7023984/93‑1 (MQ=255)

                                                              tGAAATTGATAGAAATGAAATAATGAAATAATGAAATGATGAAATGATGAAATGATGAAATGATGAAATGATGAAATGATGACAGAGTGTCCa                                <  2:2738101/93‑1 (MQ=255)

                                                                aaaTTGATAGAAATGAAATAATGAAATAATGAAATGATGAAATGATGAAATGATGAAATGATGAAATGATGAAATGATGACAGAGTGTCCAGt                              <  2:817759/93‑1 (MQ=255)

                                                                 aaTTGATAGAAATGAAATAATGAAATAATGAAATGATGAAATGATGAAATGATGAAATGATGAAATGATGAAATGATGACAGAGTGTCCAGTg                             <  2:4263587/93‑1 (MQ=255)

                                                                 aaTTGATAGAAATGAAATAATGAAATAATGAAATGATGAAATGATGAAATGATGAAATGATGAAATGATGAAATGATGACAGAGTGTCCAGTg                             <  1:7729813/93‑1 (MQ=255)

                                                                  aTTGATAGAAATGAAATAATGAAATAATGAAATGATGAAATGATGAAATGATGAAATGATGAAATGATGAAATGATGACAGAGTGTCCAGTgg                            >  1:3158175/1‑93 (MQ=255)

                                                                  aTTGATAGAAATGAAATAATGAAATAATGAAATGATGAAATGATGAAATGATGAAATGATGAAATGATGAAATGATGACAGAGTGTCCAGTgg                            <  1:5523497/93‑1 (MQ=255)

                                                                   ttGATAGAAATGAAATAATGAAATAATGAAATGATGAAATGATGAAATGATGAAATGATGAAATGATGAAATGATGACAGAGTGTCCAGTggg                           >  1:849681/1‑93 (MQ=255)

                                                                    tGATAGAAATGAAATAATGAAATAATGAAATGATGAAATGATGAAATGATGAAATGATGAAATGATGAAATGATGACAGAGTGTCCAGTGGGc                          >  2:6338586/1‑93 (MQ=255)

                                                                    tGATAGAAATGAAATAATGAAATAATGAAATGATGAAATGATGAAATGATGAAATGATGAAATGATGAAATGATGACAGAGGGTCCAGTGGGc                          >  2:6787610/1‑93 (MQ=255)

                                                                     gATAGAAATGAAATAATGAAATAATGAAATGATGAAATGATGAAATGATGAAATGATGAAATGATGAAATGATGACAGAGTGTCCAGTGGGCa                         >  1:1862044/1‑93 (MQ=255)

                                                                      aTAGAAATGAAATAATGAAATAATGAAATGATGAAATGATGAAATGATGAAATGATGAAATGATGAAATGATGACAGAGTGTCCAGTGGGCAc                        <  2:4189058/93‑1 (MQ=255)

                                                                      aTAGAAATGAAATAATGAAATAATGAAATGATGAAATGATGAAATGATGAAATGATGAAATGATGAAATGATGACAGAGTGTCCAGTGGGCAc                        >  1:72088/1‑93 (MQ=255)

                                                                      aTAGAAATGAAATAATGAAATAATGAAATGATGAAATGATGAAATGATGAAATGATGAAATGATGAAATGATGACAGAGTGTCCAGTGGGCAc                        >  1:3052465/1‑93 (MQ=255)

                                                                      aTAGAAATGAAATAATGAAATAATGAAATGATGAAATGATGAAATGATGAAATGATGAAATGATGAAATGATGACAGAGTGTCCAGTGGGCAc                        >  1:7621468/1‑93 (MQ=255)

                                                                      aTAGAAATGAAATAAGGAAATAATGAAATGATGAAATGATGAAATGATGAAATGATGAAATGATGAAATGATGACAGAGTGTCCAGTGGGCAc                        <  1:4402903/93‑1 (MQ=255)

                                                                       tAGAAATGAAATAATGAAATAATGAAATGATGAAATGATGAAATGATGAAATGATGAAATGATGAAATGATGACAGAGTGTCCAGTGGGCACg                       >  2:2809808/1‑93 (MQ=255)

                                                                       tAGAAATGAAATAATGAAATAATGAAATGATGAAATGATGAAATGATGAAATGATGAAATGATGAAATGATGACAGAGTGTCCAGTGGGCACg                       <  2:1073000/93‑1 (MQ=255)

                                                                       tAGAAATGAAATAATGAAATAATGAAATGATGAAATGATGAAATGATGAAATGATGAAATGATGAAATGATGACAGAGTGTCCAGTGGGCACg                       >  1:1028722/1‑93 (MQ=255)

                                                                       tAGAAATGAAATAATGAAATAATGAAATGATGAAATGATGAAATGATGAAATGATGAAATGAAGAAATGATGACAGAGTGTCCAGTGGGCACg                       >  2:1939604/1‑93 (MQ=255)

                                                                         gaaatgaaatAATGAAATAATGAAATGATGAAATGATGAAATGATGAAATGATGAAATGATGAAATGCTGACAGAGTGTCCAGTGGGCACGGa                     <  1:3981514/93‑1 (MQ=255)

                                                                         gaaatgaaatAATGAAATAATGAAATGATGAAATGATGAAATGATGAAATGATGAAATGATGAAATGATGACAGAGTGTCCAGTGGGCACGGa                     <  2:3713553/93‑1 (MQ=255)

                                                                         gaaatgaaatAATGAAATAATGAAATGATGAAATGATGAAATGATGAAATGATGAAATGATGAAATGATGACAGAGTGTCCAGTGGGCACGGa                     >  2:5957349/1‑93 (MQ=255)

                                                                           aatgaaataatgaaataatgaaatGATGAAATGATGAAATGATGAAATGATGAAATGATGAAATGATGACAGAGTGTCCAGTGGGCACGGATg                   >  1:5818055/1‑93 (MQ=255)

                                                                           aatgaaataatgaaataatgaaatGATGAAATGATGAAATGATGAAATGATGAAATGATGAAATGATGACAGAGTGTCCAGTGGGCACGGATg                   >  2:6951798/1‑93 (MQ=255)

                                                                            atgaaataatgaaataatgaaatGATGAAATGATGAAATGATGAAATGATGAAATGATGAAATGATGACAGAGTGTCCAGTGGGCACGGATgg                  >  2:3868243/1‑93 (MQ=255)

                                                                             tgaaataatgaaataatgaaatGATGAAATGATGAAATGATGAAATGATGAAATGATGAAATGATGACAGAGTGTCCAGTGGGCACGGATGgt                 >  1:1632142/1‑93 (MQ=255)

                                                                              gaaataatgaaataatgaaatGATGAAATGATGAAATGATGAAATGATGAAATGATGAAATGATGACAGAGTGTCCAGTGGGCACGGATGgtg                >  2:3491846/1‑93 (MQ=255)

                                                                               aaataatgaaataatgaaatGATGAAATGATGAAATGATGAAATGATGAAATGATGAAATGATGACAGAGAGTCCAGTGGGCACGGATGgtgt               >  2:2538924/1‑93 (MQ=255)

                                                                                aataatgaaataatgaaatGATGAAATGATGAAATGATGAAATGATGAAATGATGAAATGATGACAGAGTGTCCAGTGGGCACGGATGGTGTc              <  2:1997039/93‑1 (MQ=255)

                                                                                aataatgaaataatgaaatGATGAAATGATGAAATGATGAAATGATGAAATGATGAAATGATGACAGAGTGTCCAGTGGGCACGGATGGTGTc              <  1:3930929/93‑1 (MQ=255)

                                                                                  taatgaaataatgaaatGATGAAATGATGAAATGATGAAATGATGAAATGATGAAATGATGACAGAGTGTCCAGTGGGCACGGATGGTGTCtt            >  1:5706055/1‑93 (MQ=255)

                                                                                  taatgaaataatgaaatGATGAAATGATGAAATGATGAAATGATGAAATGATGAAATGATGACAGAGTGTCCAGTGGGCACGGATGGTGTCtt            >  2:4611572/1‑93 (MQ=255)

                                                                                    atgaaataatgaaatGATGAAATGATGAAATGATGAAATGATGAAATGATGAAATGATGACAGAGTGTCCAGTGGGCACGGATGGTGTCTTAc          <  1:3566690/93‑1 (MQ=255)

                                                                                    atgaaataatgaaatGATGAAATGATGAAATGATGAAATGATGAAATGATGAAATGATGACAGAGTGTCCAGTGGGCACGGATGGTGTCTTAc          >  1:4512442/1‑93 (MQ=255)

                                                                                    atgaaataatgaaatGATGAAATGATGAAATGATGAAATGATGAAATGATGAAATGATGACAGAGTGTCCAGTGGGCACGGATGGTGTCTTAc          >  2:7191439/1‑93 (MQ=255)

                                                                                    atgaaataatgaaatGATGAAATGATGAAATGATAAAATGATGAAATGATGAAATGATGACAGAGTGTCCAGTGGGCACGGATGGTGTCTTAc          <  2:2111248/93‑1 (MQ=255)

                                                                                      gaaataatgaaatGATGAAATGATGAAATGATGAAATGATGAAATGATGAAATGATGACAGAGTGTCCAGTGGGCACGGATGGTGTCTTACGa        <  2:2285276/93‑1 (MQ=255)

                                                                                      gaaataatgaaatGATGAAATGATGAAATGATGAAATGATGAAATGATGAAATGATGACAGAGTGTCCAGTGGGCACGGATGGTGTCTTACGa        <  2:3444224/93‑1 (MQ=255)

                                                                                        aataatgaaatGATGAAATGATGAAATGATGAAATGATGAAATGATGAAATGATGACAGAGTGTCCAGTGGGCACGGATGGTGTCTTACGACa      <  2:7750224/93‑1 (MQ=255)

                                                                                        aataatgaaatGATGAAATGATGAAATGATGAAATGATGAAATGATGAAATGATGACAGAGTGTCCAGTGGGCACGGATGGTGTCTTACGACa      <  1:2529724/93‑1 (MQ=255)

                                                                                        aataatgaaatGATGAAATGATGAAATGATGAAATGATGAAATGATGAAATGATGACAGAGTGTCCAGTGGGCACGGATGGTGTCTTACGACa      >  2:3760136/1‑93 (MQ=255)

                                                                                          taatgaaatGATGAAATGATGAAATGATGAAATGATGAAATGATAAAATGATGACAGAGTGTCCAGTGGGCACGGATGGTGTCTTACGACATg    >  2:5695664/1‑93 (MQ=255)

                                                                                           aatgaaatgaTGAAATGATGAAATGATGAAATGATGAAATGATGAAATGATGACAGAGTGTCCAGTGGGCACGGATGGTGTCTTACGACATGc   >  1:264097/1‑93 (MQ=255)

                                                                                           aatgaaatgaTGAAATGATGAAATGATGAAATGATGAAATGATGAAATGATGACAGAGTGTCCAGTGGGCACGGATGGTGTCTTACGACATGc   <  2:5117298/93‑1 (MQ=255)

                                                                                           aatgaaatgaTGAAATGATGAAATGATGAAATGATGAAATGATGAAATGATGACAGAGTGTCCAGAGGGCACGGATGGTGTCTTACGACATGc   >  1:5748614/1‑93 (MQ=255)

                                                                                            atgaaatgatgaaatgatgaaatgatgaaatgatgaaatgatgaaatgATGACAGAGTGTCCAGTGGGCACGGATGGTGTCTTACGACATGCt  <  1:7676452/93‑1 (MQ=255)

TTGTGATCAGTAGCACGTATCGAGGAGGAGTAGCGCTACAAATTTGACGCTGGGTGAGAATCTGAAATTGATAGAAATGAAATAATGAAATAATGAAATGATGAAATGATGAAATGATGAAATGATGAAATGATGAAATGATGACAGAGTGTCCAGTGGGCACGGATGGTGTCTTACGACATGCT  >  NC_000913/1197585‑1197769

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 26 ≤` `ATCG/ATCG` `< 32 ≤` `ATCG/ATCG` `< 37 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.