New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913 = 279335NA (NA)296 (0.960) 130/184 0.3 97.4% coding (252/339 nt) b4505 hypothetical protein
?NC_000913 370982 = 8 (0.030)coding (535/882 nt) mhpC 2‑hydroxy‑6‑ketonona‑2,4‑dienedioic acid hydrolase

Only 100 of 639 total aligned reads displayed.

GCATGAGTTTGTTTACGCCGATGCCAACCGAAGGTATTAAGCGACTGAATCAGCTTTATCGTCAGCCGACTATCGAAAACCTGAAGCTGATGATGGATATCTTCGTTTTTGATACCAGCGATTTGACCGACGCCCTGTTTGAAGCGCGCCTGAATAATATGCTGTCGCGCCGCGATCACCTGGAA  >  NC_000913/370890‑371074
                                                                                            |                                                                                            
tcagctaaacaacagaccgagaaagacactgaagttcaaaacaccgaaagagataattgaaaggggtgttgcattgacagattgaatctacaa                                                                                              <  2:4430687‑M2/1‑1 (MQ=255)
 cagctaaacaacagaccgagaaagacactgaagttcaaaacaccgaaagagataattgaaaggggtgttgcattgacagattgaatctacaAt                                                                                             >  2:2652014‑M2/92‑93 (MQ=255)
 cATGAGTTTGTTTACGCCGATGCCAACCGAAGGTATTAAGCGACTGAATCAGCTTTATCGTCAGCCGACTATCGAAAACCTGAAGCTgatgat                                                                                             <  1:4248835/93‑1 (MQ=255)
  aTGAGTTTGTTTACGCCGATGCCAACCGAAGGTATTAAGCGACTGAATCAGCTTTATCGTCAGCCGACTATCGAAAACCTGAAGCTGATGATt                                                                                            <  2:7863259‑M2/93‑2 (MQ=255)
  aTGAGTTTGTTTACGCCGATGCCAACCGAAGGTATTAAGCGACTGAATCAGCTTTATCGTCAGCCGACTATCGAAAACCTGAAGCTGATGATt                                                                                            <  1:6909547‑M2/93‑2 (MQ=255)
  aTGAGTTTGTTTACGCCGATGCCAACCGAAGGTATTAAGCGACTGAATCAGCTTTATCGTCAGCCGACTATCGAAAACCTGAAGCTGATGATt                                                                                            <  1:4728285‑M2/93‑2 (MQ=255)
  aTGAGTTTGTTTACGCCGATGCCAACCGAAGGTATTAAGCGACTGAATCAGCTTTATCGTCAGCCGACTATCGAAAACCTGAAGCTGATGATt                                                                                            <  2:3979303‑M2/93‑2 (MQ=255)
   tGAGTTTGTTTACGCCGATGCCAACCGAAGGTATTAAGCGACTGAATCAGCTTTATCGTCAGCCGACTATCGAAAACCTGAAGCTGATGATtg                                                                                           <  1:7194526‑M2/93‑3 (MQ=255)
    ctaaacaacagaccgagaaagacactgaagttcaaaacaccgaaagagataattgaaaggggtgttgcattgacagattgaatctacaATGGa                                                                                          <  1:4127145‑M2/5‑1 (MQ=255)
      gtttgtttACGCCGATGCCAACCGAAGGTATTAAGCGACTGAATCAGCTTTATCGTCAGCCGACTATCGAAAACCTGAAGCTGATGATtgtag                                                                                        <  2:3774423‑M2/93‑6 (MQ=255)
      aaacaacagaccgagaaagacactgaagttcaaaacaccgaaagagataattgaaaggggtgttgcattgacagattgaatctacaATGGata                                                                                        <  1:7148220‑M2/7‑1 (MQ=255)
      aaacaacagaccgagaaagacactgaagttcaaaacaccgaaagagataattgaaaggggtgttgcattgacagattgaatctacaATGGata                                                                                        <  2:7165893‑M2/7‑1 (MQ=255)
              aCGCCGATGCCAACCGAAGGTATTAAGCGACTGAATCAGCTTTATCGTCAGCCGACTATCGAAAACCTGAAGCTGATGATtgtagattcaatt                                                                                >  1:2440633‑M2/1‑80 (MQ=255)
               accgagaaagacactgaagttcaaaacaccgaaagagataattgaaaggggtgttgcattgacagattgaatctacaATGGATATCTTCGttt                                                                               >  1:5808859‑M2/78‑93 (MQ=255)
               accgagaaagacactgaagttcaaaacaccgaaagagataattgaaaggggtgttgcattgacagattgaatctacaATGGATATCTTCGttt                                                                               <  2:2823979‑M2/16‑1 (MQ=255)
                gCCGATGCCAACCGAAGGTATTAAGCGACTGAATCAGCTTTATCGTCAGCCGACTATCGAAAACCTGAAGCTGATGATtgtagattcaattgg                                                                              >  2:612162‑M2/1‑78 (MQ=255)
                   agaaagacactgaagttcaaaacaccgaaagagataattgaaaggggtgttgcattgacagattgaatctacaATGGATATCTTCGTTTTTGa                                                                           <  1:3334384‑M2/20‑1 (MQ=255)
                    aTGCCAACCGAAGGTATTAAGCGACTGAATCAGCTTTATCGTCAGCCGACTATCGAAAACCTGAAGCTGATGATtgtagattcaattggtcaa                                                                          >  2:4058957‑M2/1‑74 (MQ=255)
                      gCCAACCGAAGGTATTAAGCGACTGAATCAGCTTTATCGTCAGCCGACTATCGAAAACCTGAAGCTGATGATtgtagattcaattggtcaacg                                                                        <  2:515497‑M2/93‑22 (MQ=255)
                      aagacactgaagttcaaaacaccgaaagagataattgaaaggggtgttgcattgacagattgaatctacaATGGATATCTTCGTTTTTGATAc                                                                        <  1:960403‑M2/23‑1 (MQ=255)
                       agacactgaagttcaaaacaccgaaagagataattgaaaggggtgttgcattgacagattgaatctacaATGGATATCTTCGTTTTTGATAcc                                                                       <  1:3059941‑M2/24‑1 (MQ=255)
                         aaCCGAAGGTATTAAGCGACTGAATCAGCTTTATCGTCAGCCGACTATCGAAAACCTGAAGCTGATGATtgtagattcaattggtcaacgcaa                                                                     >  2:4691092‑M2/1‑69 (MQ=255)
                          tactgaagttcaaaacaccgaaagagataattgaaaggggtgttgcattgacagattgaatctacaATGGATATCGTCGTATTTGATACCAGc                                                                    >  2:7027512‑M2/67‑93 (MQ=255)
                          aCCGAAGGTATTAAGCGACTGAATCAGCTTTATCGTCATTCGACTATCGAAAATCTTAATCTGATGATtgtagatttaattggtcaacgcaac                                                                    <  2:6003440‑M2/93‑26 (MQ=255)
                           ccGAAGGTATTAAGCGACTGAATCAGCTTTATCGTCAGCCGACTATCGAAAACCTGAAGCTGATGATtgtagattcaattggtcaacgcaaca                                                                   >  1:7343614‑M2/1‑67 (MQ=255)
                            ctgaagttcaaaacaccgaaagcgataattgaaaggggtgttgcattgacagattgaatctacaATGGATATCTTCGTTTTTGATACCAGCGa                                                                  >  1:5643146‑M2/65‑93 (MQ=255)
                            cGAAGGTATTAAGCGACTGAATCAGCTTTATCGTCAGCCGACTATCGAAAACCTGAAGCTGATGATtgtagattcaattggtcaacgcaacag                                                                  <  1:1019983‑M2/93‑28 (MQ=255)
                             tgaagttcaaaacaccgaaagagataattgaaaggggtgttgcattgacagattgaatctacaATGGATATCTTCGTTTTTGATACCAGCGAt                                                                 >  2:1384265‑M2/64‑93 (MQ=255)
                              aaGGTATTAAGCGACTGAATCAGCTTTATCGTCAGCCGACTATCGAAAACCTGAAGCTGATGATtgtagattcaattggtcaacgcaacagtt                                                                >  1:6123922‑M2/1‑64 (MQ=255)
                                agttcaaaacaccgaaagagataattgaaaggggtgttgcattgacagattgaatctacaATGGATATCTTCGTTTTTGATACCAGCGATTTg                                                              <  1:1994405‑M2/33‑1 (MQ=255)
                                aggtcaaaacaccgaaagagataatggaaaggggttttgcattgacagattgaatctacaATGGATATCTTCGTTTTTGATACCAGCGATTTg                                                              <  1:268956‑M2/33‑1 (MQ=255)
                                 gttcaaaacaccgaaagagataattgaaaggggtgttgcattgacagattgaatctacaATGGATATCTTCGTTTTTGATACCAGCGATTTGa                                                             <  1:7456271‑M2/34‑1 (MQ=255)
                                 gTATTAAGCGACTGAATCAGCTTTATCGTCAGCCGACTATCGAAAACCTGAAGCTGATGATtgtagattcaattggtcaacgcaacagttatg                                                             <  2:6918676‑M2/93‑33 (MQ=255)
                                 gTATTAAGCGACTGAATCAGCTTTATCGTCAGCCGACTATCGAAAACCTGAAGCTGATGATtgtagattcaattggtcaacgcaacagttatg                                                             <  1:3261813‑M2/93‑33 (MQ=255)
                                 gTATTAAGCGACTGAATCAGCTTTATCGTCAGCCGACTATCGAAAACCTGAAGCTGATGAGggtagattcaattggtcagcccaacagttttt                                                             <  2:6815401‑M2/93‑33 (MQ=255)
                                   tcaaaacaccgaaagagataattgaagggggtgttgcattcacagattgaatctacaATGGATATCTTCGTTTTTGATACCAGCGATTTGAcc                                                           <  1:157945‑M2/36‑1 (MQ=255)
                                    caaaacaccgaaagagataattgaaaggggtgttgcattgacagattgaatctacaATGGATATCTTCGTTTTTGATACCAGCGATTTGACCg                                                          >  2:1135662‑M2/57‑93 (MQ=255)
                                     tAAGCGACTGAATCAGCTTTATCGTCAGCCGACTATCGAAAACCTGAAGCTGATGATtgtagattcaattggtcaacgcaacagttatgtgaa                                                         <  1:4568597‑M2/93‑37 (MQ=255)
                                     aaaacaccgaaagagataattgaaaggggtgttgcattgacagattgaatctacaATGGATATCTTCGTTTTTGATACCAGCGATTTGACCGa                                                         <  1:6012053‑M2/38‑1 (MQ=255)
                                        gCGACTGAATCAGCTTTATCGTCTGCCGACTATCGAAAACCTGAAGCTGATGATtgtagattcaattggtcaacgcaacagttatgtgaaaac                                                      >  1:2824734‑M2/1‑54 (MQ=255)
                                           aCTGAATCAGCTTTATCGTCAGCCGACTATCGAAAACCTGAAGCTGATGATtgtagattcaattggtcaacgcaacagttatgtgaaaacatg                                                   >  2:6630221‑M2/1‑51 (MQ=255)
                                           aCTGAATCAGCTTTATCGTCAGCCGACTATCGAAAACCTGAAGCTGATGATtgtagattcaattggtcaacgcaacagttatgtgaaaacatg                                                   <  2:7421148‑M2/93‑43 (MQ=255)
                                            cTGAATCAGCTTTATCGTCAGCCGACTATCGAAAACCTGAAGCTGATGATtgtagattcaattggtcaacgcaacagttatgtgaaaacatgg                                                  <  1:3487817‑M2/93‑44 (MQ=255)
                                             tGAATCAGCTTTATCGTCAGCCGACTATCGAAAACCTGAAGCTGATGATtgtagattcaattggtcaacgcaacagttatgtgaaaacatggg                                                 <  2:93066‑M2/93‑45 (MQ=255)
                                             tGAATCAGCTTTATCGTCAGCCGACTATCGAAAACCTGAAGCTGATGATtgtagattcaattggtcaacgcaacagttatgtgaaaacatggg                                                 >  2:4782752‑M2/1‑49 (MQ=255)
                                              gAATCAGCTTTATCGTCAGCCGACTATCGAAAACCTGAAGCTGATGATtgtagattcaattggtcaacgcaacagttatgtgaaaacatgggg                                                <  1:6335061‑M2/93‑46 (MQ=255)
                                              gAATCAGCTTTATCGTCAGCCGACTATCGAAAACCTGAAGCTGATGATtgtagattcaattggtcaacgcaacagttatgtgaaaacatgggg                                                <  2:4914840‑M2/93‑46 (MQ=255)
                                              gAATCAGCTTTATCGTCAGCCGACTATCGAAAACCTGAAGCTGATGATtgtagattcaattggtcaacgcaacagttatgtgaaaacatgggg                                                <  2:7275135‑M2/93‑46 (MQ=255)
                                              aaagagataattgaaaggggtgttgcattgacagattgaatctacaATGGATATCTTCGTTTTTGATACCAGCGATTTGACCGACGCCCTGtt                                                <  1:4838548‑M2/47‑1 (MQ=255)
                                              aaagagataattgaaaggggtgttgcattgacagattgaatctacaATGGATATCTTCGTTTTTGATACCAGCGATTTGACCGACGCCCTGtt                                                <  2:7674222‑M2/47‑1 (MQ=255)
                                                agagataattgaaaggggtgttgcattgacagattgaatctacaATGGATATCTTCGTTTTTGATACCAGCGATTTGACCGACGCCCTGTTTg                                              <  2:6299261‑M2/49‑1 (MQ=255)
                                                aTCAGCTTTATCGTCAGCCGACTATCGAAAACCTGAAGCTGATGATtgtagattcaattggtcaacgcaacagttatgtgaaaacatggggtt                                              <  1:7818183‑M2/93‑48 (MQ=255)
                                                 tCAGCTTTATCGTCAGCCGACTATCGAAAACCTGAAGCTGATGATtgtagattcaattggtcaacgcaacagttatgtgaaaacatggggttg                                             <  2:4125177‑M2/93‑49 (MQ=255)
                                                 gagataattgaaaggggtgttgcattgacagattgaatctacaATGGATATCTTCGTTTTTGATACCAGCGATTTGACCGACGCCCTGTTTGa                                             >  1:2151875‑M2/44‑93 (MQ=255)
                                                 acaGCTTTATCGTCAGCCGGCTATCGAAAACCTGAAGCTGATGATtgtagattcaattggtcaacgcaacagttatgtgaaaacatggggttg                                             >  2:5920161‑M2/2‑45 (MQ=255)
                                                  cAGCTTTATCGTCAGCCGACTATCGAAAACCTGAAGCTGATGATtgtagattcaattggtcaacgcaacagttatgtgaaaacatggggttgc                                            <  1:1390896‑M2/93‑50 (MQ=255)
                                                    gCTTTATCGTCAGCCGACTATCGAAAACCTGAAGCTGATGATtgtagattcaattggtcaacgcaacagttatgtgaaaacatggggttgcgg                                          <  1:5906916‑M2/93‑52 (MQ=255)
                                                      tttATCGTCAGCCGACTATCGAAAACCTGAAGCTGATGATtgtagattcaattggtcaacgcaacagttatgtgaaaacatggggttgcggag                                        <  2:81283‑M2/93‑54 (MQ=255)
                                                       ttATCGTCAGCCGACTATCGAAAACCTGAAGCTGATGATtgtagattcaattggtcaacgcaacagttatgtgaaaacatggggttgcggagg                                       <  2:543225‑M2/93‑55 (MQ=255)
                                                        ttgaaaggggtgttgcattgacagattgaatctacaATGGATATCTTCGTTTTTGATACCAGCGATTTGACCGACGCCCTGTTTGAAgcgcgc                                      <  1:3545955‑M2/57‑1 (MQ=255)
                                                           cGTCAGCCGACTATCGAAAACCTGAAGCTGATGATtgtagattcaattggtcaacgcaacagttatgtgaaaacatggggttgcggaggtttt                                   >  2:4363553‑M2/1‑35 (MQ=255)
                                                           cGTCAGCCGACTATCGAAAACCTGAAGCTGATGATtgtagattcaattggtcaacgcaacagttatgtgaaaacatggggttgcggaggtttt                                   >  1:6657231‑M2/1‑35 (MQ=255)
                                                            gTCAGCCGACTATCGAAAACCTGAAGCTGATGATtgtagattcaattggtcaacgcaacagttatgtgaaaacatggggttgcggaggttttt                                  >  1:1513250‑M2/1‑34 (MQ=255)
                                                            gTCAGCCGACTATCGAAAACCTGAAGCTGATGATtgtagattcaattggtcaacgcaacagttatgtgaaaacatggggttgcggaggttttt                                  >  2:2003065‑M2/1‑34 (MQ=255)
                                                             tCAGCCGACTATCGAAAACCTGAAGCTGATGATtgtagattcaattggtcaacgcaacagttatgtgaaaacatggggttgcggaggtttttt                                 >  2:2932172‑M2/1‑33 (MQ=255)
                                                             tCAGCCGACTATCGAAAACCTGAAGCTGATGATtgtagattcaattggtcaacgcaacagttatgtgaaaacatggggttgcggaggtttttt                                 >  2:1267259‑M2/1‑33 (MQ=255)
                                                             tCAGCCGACTATCGAAAACCTGAAGCTGATGATtgtagattcaattggtcaacgcaacagttatgtgaaaacatggggttgcggaggtttttt                                 >  1:5179879‑M2/1‑33 (MQ=255)
                                                              ggggtgttgcattgacagattgaatctacaATGGATATCTTCGTTTTTGATACCAGCGATTTGACCGACGCCCTGTTTGAAGCGCGCCTGaat                                >  1:679452‑M2/31‑93 (MQ=255)
                                                               gggtgttgcattgacagattgaatctacaATGGATATCTTCGTTTTTGATACCAGCGATTTGACCGACGCCCTGTTTGAAGCGCGCCTGaata                               >  2:3647175‑M2/30‑93 (MQ=255)
                                                                  tgttgcattgacagattgaatctacaATGGATATCTTCGTTTTTGATACCAGCGATTTGACCGACGCCCTGTTTGAAGCGCGCCTGAataata                            <  1:444414‑M2/67‑1 (MQ=255)
                                                                  cGCCTATCGAAAACCTGAAGCTGATGATtgtagattcaattggtcaacgcaacagttatgtgaaaacatggggttgcggaggttttttgaatg                            >  1:7683188‑M2/1‑28 (MQ=255)
                                                                  cGACTATCGAAAACCTGAAGCTGATGATtgtagattcaattggtcaacgcaacagttatgtgaaaacatggggttgcggaggttttttgaatg                            >  2:5545193‑M2/1‑28 (MQ=255)
                                                                   gttgcattgacagattgaatctacaATGGATATCTTCGTTTTTGATACCAGCGATTTGACCGACGCCCTGTTTGAAGCGCGCCTGAATAatat                           <  2:5304022‑M2/68‑1 (MQ=255)
                                                                    ttgcattgacagattgaatctacaATGGATATCTTCGTTTTTGATACCAGCGATTTGACCGACGCCCTGTTTGAAGCGCGCCTGAATAATATg                          >  2:5672302‑M2/25‑93 (MQ=255)
                                                                    aCTATCCAAAACCTGAAGCTGATGATtgtagattcaattggtcaacgcaacagttatgtgaaaacatggggttgcggaggttttttgaatgag                          >  2:2168462‑M2/1‑26 (MQ=255)
                                                                     tgcattgacagattgaatctacaATGGATATCTTCGTTTTTGATACCAGCGATTTGACCGACGCCCTGTTTGAAGCGCGCCTGAATAATATGc                         <  1:2594172‑M2/70‑1 (MQ=255)
                                                                      tATCGAAAACCTGAAGCTGATGATtgtagattcaattggtcaacgcaacagttatgtgaaaacatggggttgcggaggttttttgaatgagac                        <  1:50697‑M2/93‑70 (MQ=255)
                                                                          gAAAACCTGAAGCTGATGATtgtagattcaattggtcaacgcaacagttatgtgaaaacatggggttgcggaggttttttgaatgagacgaac                    <  2:446821‑M2/93‑74 (MQ=255)
                                                                           gacagattgaatctacaATGGATATCTTCGTTTTTGATACCAGCGATTTGACCGACGCCCTGTTTGAAGCGCGCCTGAATAATATGCTGTcgc                   <  1:4016623‑M2/76‑1 (MQ=255)
                                                                             cagattgaatctacaATGGATATCTTCGTTTTTGATACCAGCGATTTGACCGACGCCCTGTTTGAAGCGCGCCTGAATAATATGCTGTCgcgc                 >  1:4913125‑M2/16‑93 (MQ=255)
                                                                              agattgaatctacaATGGATATCTTCGTTTTTGATACCAGCGATTTGACCGACGCCCTGTTTGAAGCGCGCCTGAATAATATGCTGTCGcgcc                >  1:3659366‑M2/15‑93 (MQ=255)
                                                                              aCCTGAAGCTGATGATtgtagattcaattggtcaacgcaacagttatgtgaaaacatggggttgcggaggttttttgaatgagacgaacattt                >  1:840113‑M2/1‑16 (MQ=255)
                                                                              aCCTGAAGCTGATGATtgtagattcaattggtcaacgcaacagttatgtgaaaacatggggttgcggaggttttttgaatgagacgaacattt                <  2:3500212‑M2/93‑78 (MQ=255)
                                                                               gattgaatctacaATGGATATCTTCGTTTTTGATACCAGCGATTTGACCGACGCCCTGTTTGAAGCGCGCCTGAATAATATGCTGTCGcgccg               >  2:1841341‑M2/14‑93 (MQ=255)
                                                                               gattgaatctacaATGGATATCTTCGTTTTTGATACCAGCGATTTGACCGACGCCCTGTTTGAAGCGCGCCTGAATAATATGCTGTCGcgccg               >  1:6444590‑M2/14‑93 (MQ=255)
                                                                               gattgaatctacaATGGATATCTTCGTTTTTGATACCAGCGATTTGACCGACGCCCTGTTTGAAGCGCGCCTGAATAATATGCTGTCGcgccg               <  2:3279120‑M2/80‑1 (MQ=255)
                                                                               ccTGAAGCTGATGATtgtagattcaattggtcaacgcaacagttatgtgaaaacatggggttgcggaggttttttgaatgagacgaacattta               <  2:3143952‑M2/93‑79 (MQ=255)
                                                                                 ttgaatctacaATGGATATCTTCGTTTTTGATACCAGCGATTTGACCGACGCCCTGTTTGAAGCGCGCCTGAATAATATGCTGTCGCGCcgcg             >  1:1115087‑M2/12‑93 (MQ=255)
                                                                                   gaatctacaATGGATATCTTCGTTTTTGATACCAGCGATTTGACCGACGCCCTGTTTGAAGCGCGCCTGAATAATATGCTGTCGCGCCGCGAt           <  2:6408208‑M2/84‑1 (MQ=255)
                                                                                   gaatctacaATGGATATCTTCGTTTTTGATACCAGCGATTTGACCGACGCCCTGTTTGAAGCGCGCCTGAATAATATGCTGTCGCGCCGCGAt           >  2:2374996‑M2/10‑93 (MQ=255)
                                                                                     atctacaATGGATATCTTCGTTTTTGATACCAGCGATTTGACCGACGCCCTGCTTGAAGCGCGCCTGAATAATATGCTGTCGCGCCGCGATCa         >  2:7533886‑M2/8‑93 (MQ=255)
                                                                                      tctacaATGGATATCTTCGTTTTTGATACCAGCGATTTGACCGACGCCCTGTTTGAAGCGCGCCTGAATAATATGCTGTCGCGCCGCGATCAc        <  1:3138132‑M2/87‑1 (MQ=255)
                                                                                      tctacaATGGATATCTTCGTTTTTGATACCAGCGATTTGACCGACGCCCTGTTTGAAGCGCGCCTGAATAATATGCTGTCGCGCCGCGATCAc        <  1:1168742‑M2/87‑1 (MQ=255)
                                                                                       ctacaATGGATATCTTCGTTTTTGATACCAGCGATTTGACCGACGCCCTGTTTGAAGCGCGCCTGAATAATATGCTGTCGCGCCGCGATCAcc       <  1:1861931‑M2/88‑1 (MQ=255)
                                                                                        tacaATGGATATCTTCGTTTTTGATACCAGCGATTTGACCGACGCCCTGTTTGAAGCGCGCCTGAATAATATGCTGTCGCGCCGCGATCACCt      >  1:2939893‑M2/5‑93 (MQ=255)
                                                                                          tgattgtagattcaattggtcaacgcaacagttatgtgaaaacatggggttgcggaggttttttgaatgagacgaacatttacagcagaggaa    >  1:5526844‑M2/1‑4 (MQ=255)
                                                                                          tgattgtagattcaattggtcaacgcaacagttatgtgaaaacatggggttgcggaggttttttgaatgagacgaacatttacagcagaggaa    >  2:1558609‑M2/1‑4 (MQ=255)
                                                                                           gattgtagattcaattggtcaacgcaacagttatgtgaaaacatggggttgcggaggttttttgaatgagacgaacatttacagcagaggaaa   <  1:5302908‑M2/93‑91 (MQ=255)
                                                                                           gattgtagattcaattggtcaacgcaacagttatgtgaaaacatggggttgcggaggttttttgaatgagacgaacatttacagcagaggaaa   <  1:4346037‑M2/93‑91 (MQ=255)
                                                                                           aATGGATATCTTCGTTTTTGATACCAGCGATTTGACCGACGCCCTGTTTGAAGCGCGCCTGAATAATATGCTGTCGCGCCGCGATCACCTGGa   >  1:3851159‑M2/2‑93 (MQ=255)
                                                                                            |                                                                                            
GCATGAGTTTGTTTACGCCGATGCCAACCGAAGGTATTAAGCGACTGAATCAGCTTTATCGTCAGCCGACTATCGAAAACCTGAAGCTGATGATGGATATCTTCGTTTTTGATACCAGCGATTTGACCGACGCCCTGTTTGAAGCGCGCCTGAATAATATGCTGTCGCGCCGCGATCACCTGGAA  >  NC_000913/370890‑371074

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 29 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.