New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913 365527 =0 (0.000)318 (1.070) 134/178 0.1 69.6% coding (3/3075 nt) lacZ beta‑D‑galactosidase
?NC_000913 4589230 = 278 (0.930)coding (4/1656 nt) tsr methyl‑accepting chemotaxis protein I

Only 100 of 642 total aligned reads displayed.

ATTCACTCGGCGTAATCTCCGCGGGATATTCATAAAGTTTTTCCTTTCCAGGCCGAAAATCTTGCATCGGTCCACAGGAAAGAGAAACCATGTTAAAACGTATCAAAATTGTGACCAGCTTACTGCTGGTTTTGGCCGTTTTTGGCCTTTTACAACTGACATCAGGCGGTCTGTTCTTTAATGCC  >  NC_000913/4589138‑4589322
                                                                                            |                                                                                            
 ttCACTCGGCGTAATCTCCGCGGGATATTCATAAAGTTTTTCCTTTCCAGGCCGAAAATCTTGCATCGGTCCACAGGAAAGAGAAACCATGtt                                                                                             >  2:5428539/1‑93 (MQ=255)
 taggcaccccaggctttacactttatgcttccggctcgtatgttgtgtggaattgtgagcggataacaatttcacacaggaaacagctatgtt                                                                                             <  1:128125‑M2/2‑1 (MQ=255)
 taggcaccccaggctttacactttatgcttccggctcgtatgttgtgtggaattgtgagcggataacaatttcacacaggaaacagctatgtt                                                                                             >  1:637984‑M2/92‑93 (MQ=255)
   tccTCGGCGTAAGCTCCGCGGGATATTCATAACGTTTTGCCTTTCCAGGCCGAAAATCTTGCATCGGTCCACAGGAAAGAGAAACCATGTTaa                                                                                           <  1:4037009/91‑1 (MQ=255)
    gcaccccaggctttacactttatgcttccggctcgtatgttgtgtggaattgtgagcggataacaatttcacacaggaaacagctatgTTaaa                                                                                          <  1:1149203‑M2/5‑1 (MQ=255)
    gcaccccaggctttacactttatgcttccggctcgtatgttgtgtggaattgtgagcggataacaatttcacacaggaaacagctatgTTaaa                                                                                          <  1:1703163‑M2/5‑1 (MQ=255)
    aCTCGGCGTAATCTCCGCGGGATATTCATAAAGTTTTTCCTTTCCAGGCCGAAAATCTTGCATCGGTCCACAGGAAAGAGAAACCATGTTaaa                                                                                          >  1:312104/1‑93 (MQ=255)
     cTCGGCGTAATCTCCGCGGGATATTCATAAAGTTTTTCCTTTCCAGGCCGAAAATCTTGCATCGGTCCACAGGAAAGAGAAACCATGTTaaaa                                                                                         <  1:7262078/93‑1 (MQ=255)
      tCGGCGTAATCTCCGCGGGATATTCATAAAGTTTTTCCTTTCCAGGCCGAAAATCTTGCATCGGTCCACAGGAAAGAGAAACCATGTTAAAAc                                                                                        >  2:3276123/1‑93 (MQ=255)
      accccaggctttacactttatgcttccggctcgtatgttgtgtggaattgtgagcggataacaatttcacacaggaaacagctatgTTAAAAc                                                                                        >  1:926417‑M2/87‑93 (MQ=255)
       ccccaggctttacactttatgcttccggctcgtatgttgtgtggaattgtgagcggataacaatttcacacaggaaacagctatgTTAAAACg                                                                                       >  1:977385‑M2/86‑93 (MQ=255)
       ccccaggctttacactttatgcttccggctcgtatgttgtgtggaattgtgagcggataacaatttcacacaggaaacagctatgTTAAAACg                                                                                       >  1:155410‑M2/86‑93 (MQ=255)
       ccccaggctttacactttatgcttccggctcgtatgttgtgtggaattgtgagcggataacaatttcacacaggaaacagctatgTTAAAACg                                                                                       >  1:5194272‑M2/86‑93 (MQ=255)
        ggCGTAATCTCCGCGGGATATTCATAAAGTTTTTCCTTTCCAGGCCGAAAATCTTGCATCGGTCCACAGGAAAGAGAAACCATGTTAAAACGt                                                                                      >  2:7136285/1‑93 (MQ=255)
         ccaggctttacactttatgcttccggctcgtatgttgtgtggaattgtgagcggataacaatttcacacaggaaacagctatgTTAAAACGTa                                                                                     >  1:1001278‑M2/84‑93 (MQ=255)
           aggctttacactttatgcttccggctcgtatgttgtgtggaattgtgagcggataacaatttcacacaggaaacagctatgTTAAAACGTATc                                                                                   >  1:1363547‑M2/82‑93 (MQ=255)
               tttacactttatgcttccggctcgtatgttgtgtggaattgtgagcggataacaatttcacacaggaaacagctatgTTAAAACGTATCaaaa                                                                               >  2:5481053‑M2/78‑93 (MQ=255)
               tttacactttatgcttccggctcgtatgttgtgtggaattgtgagcggataacaatttcacacaggaaacagctatgTTAAAACGTATCaaaa                                                                               >  2:5870493‑M2/78‑93 (MQ=255)
                ctcCGCGGGATATTCATAAAGTTTTTCCTTTCCAGGCCGAAAATCTTGCATCGGTCCACAGGAAAGAGAAACCATGTTAAAACGTATCAAAAt                                                                              >  1:6583746/1‑93 (MQ=255)
                  acactttatgcttccggctcgtatgttgtgtggaattgtgagcggataacaatttcacacaggaaacagctatgTTAAAACGTATCAAAATtg                                                                            <  2:3343525‑M2/19‑1 (MQ=255)
                  acactttatgcttccggctcgtatgttgtgtggaattgtgagcggataacaatttcacacaggaaacagctatgTTAAAACGTATCAAAATtg                                                                            <  1:770130‑M2/19‑1 (MQ=255)
                   cactttatgcttccggctcgtatgttgtgtggaattgtgagcgggtaacaatttcacacaggaaacagctatgTTAAAACGGATCAAaatttt                                                                           >  2:1864129‑M2/74‑91 (MQ=255)
                   cactttatgcttccggctcgtatgttgtgtggaattgtgagcggataacaatttcacacaggaaacagctatgTTAAAACGTATCAAAATtgt                                                                           <  1:7930487‑M2/20‑1 (MQ=255)
                     cgGGATATTCATAAAGTTTTTCCTTTCCAGGCCGAAAATCTTGCATCGGTCCACAGGAAAGAGAAACCATGTTAAAACGTATCAAAATTGTGa                                                                         <  2:2149784/93‑1 (MQ=255)
                       ttatgcttccggctcgtatgttgtgtggaattgtgagcggataacaatttcacacaggaaacagctatgTTAAAACGTATCAAAATTGTGAcc                                                                       <  2:1178973‑M2/24‑1 (MQ=255)
                        tatgcttccggctcgtatgttgtgtggaattgtgagcggataacaatttcacacaggaaacagctatgTTAAAACGTATCAAAATTGTGACCa                                                                      >  2:1347424‑M2/69‑93 (MQ=255)
                        gATATTCATAAAGTTTTTCCTTTCCAGGCCGAAAATCTTGCATCGGTCCACAGGAAAGAGAAACCATGTTAAAACGTATCAAAATTGTGACCa                                                                      >  1:3674687/1‑93 (MQ=255)
                          tatTCATAAAGTTTTTCCTTTCCAGGCCGAAAATCTTGCATCGGTCCACAGGAAAGAGAAACCATGTTAAAACGTATCAAAATTGTGACCAGc                                                                    >  2:6489240/1‑93 (MQ=255)
                          tatTCATAAAGTTTTTCCTTTCCAGGCCGAAAATCTTGCATCGGTCCACAGGAAAGAGAAACCATGTTAAAACGTATCAAAATTGTGACCAGc                                                                    >  1:5947597/1‑93 (MQ=255)
                          tatTCATAAAGTTTTTCCTTTCCAGGCCGAAAATCTTGCATCGGTCCACAGGAAAGAGAAACCATGTTAAAACGTATCAAAATTGTGACCAGc                                                                    >  1:394949/1‑93 (MQ=255)
                           gcttccggctcgtatgttgtgtggaattgtgagcggataacaatttcacacaggaaacagctatgTTAAAANGTATCTAAATTGTGACCAGCt                                                                   >  1:4710458‑M2/66‑93 (MQ=255)
                           gcttccggctcgtatgttgtgtggaattgtgagcggataacaatttcacacaggaaacagctatgTTAAAACGTATCAAAATTGTGACCAGCt                                                                   >  2:703005‑M2/66‑93 (MQ=255)
                           atTCATAAAGTTTTTCCTTTCCAGGCCGAAAATCTTGCATCGGTCCACAGGAAAGAGAAACCATGTTAAAACGTATCAAAATTGTGACCAGCt                                                                   >  2:3092916/1‑93 (MQ=255)
                             tCATAAAGTTTTTCCTTTCCAGGCCGAAAATCTTGCATCGGTCCACAGGAAAGAGAAACCATGTTAAAACGTATCAAAATTGTGACCAGCTTa                                                                 >  2:4083702/1‑93 (MQ=255)
                              cATAAAGTTTTTCCTTTCCAGGCCGAAAATCTTGCATCGGTCCACAGGAAAGAGAAACCATGTTAAAACGTATCAAAATTGTGACCAGCTTAc                                                                >  2:2351962/1‑93 (MQ=255)
                              cATAAAGTTTTTCCTTTCCAGGCCGAAAATCTTGCATCGGTCCACAGGAAAGAGAAACCATGTTAAAACGTATCAAAATTGTGACCAGCTTAc                                                                <  1:3314114/93‑1 (MQ=255)
                              cATAAAGTTTTTCCTTTCCAGGCCGAAAATCTTGCATCGGTCCACAGGAAAGAGAAACCATGTTAAAACGTATCAAAATTGTGACCAGCTTAc                                                                >  1:2420021/1‑93 (MQ=255)
                               aTAAAGTTTGTCCTTTCCAGGCCGAAAATCTTGCATCGGTCCACAGGAAAGAGAAACCATGTTAAAACGTATCAAAATTGTGACCAGCTTAct                                                               <  1:4624062/93‑1 (MQ=255)
                                tAAAGTTTTTCCTTTCCAGGCCGAAAATCTTGCATCGGTCCACAGGAAAGAGAAACCATGTTAAAACGTATCAAAATTGTGACCAGCTTActg                                                              >  2:2015037/1‑93 (MQ=255)
                                  aaGTTTTTCCTTTCCAGGCCGAAAATCTTGCATCGGTCCACAGGAAAGAGAAACCATGTTAAAACGTATCAAAATTGTGACCAGCTTActgct                                                            <  1:6732426/93‑1 (MQ=255)
                                  aaGTTTTTCCTTTCCAGGCCGAAAATCTTGCATCGGTCCACAGGAAAGAGAAACCATGTTAAAACGTATCAAAATTGTGACCAGCTTActgct                                                            >  1:2919529/1‑93 (MQ=255)
                                    tcgtatgttgtgtggaattgtgagcggataacaatttcacacaggaaacagctatgTTAAAACGTATCAAAATTGTGACCAGCTTACTGCTgg                                                          >  2:4386186‑M2/57‑93 (MQ=255)
                                    tcgtatgttgtgtggaattgtgagcggataacaatttcacacaggaaacagctatgTTAAAACGTATCAAAATTGTGACCAGCTTACTGCTgg                                                          <  1:7400267‑M2/37‑1 (MQ=255)
                                     cgtatgttgtgtggaattgtgagcggataacaatttcacacaggaaacagctatgTTAAAACGTATCAAAATTGTGACCAGCTTACTGCTGGt                                                         <  2:6806754‑M2/38‑1 (MQ=255)
                                     cgtatgttgtgtggaattgtgagcggataacaatttcacacaggaaacagctatgTTAAAACGTATCAAAATTGTGACCAGCTTACTGCTGGt                                                         <  2:6568753‑M2/38‑1 (MQ=255)
                                     cgtatgttgtgtggaattgtgagcggataacaatttcacacaggaaacagctatgTTAAAACGTATCAAAATTGTGACCAGCTTACTGCTGGt                                                         >  1:6912909‑M2/56‑93 (MQ=255)
                                       tatgttgtgtggaattgtgagcggataacaatttcacacaggaaacagctatgTTAAAACGTATCAAAATTGTGACCAGCTTACTGCTGGttt                                                       >  1:183088‑M2/54‑93 (MQ=255)
                                       tatgttgtgtggaattgtgagcggataacaatttcacacaggaaacagctatgTTAAAACGTATCAAAATTGTGACCAGCTTACTGCTGGttt                                                       <  1:2189246‑M2/40‑1 (MQ=255)
                                       tatgttgtgtggaattgtgagcggataacaatttcacacaggaaacagctatgTTAAAACGTATCAAAATTGTGACCAGCTTACTGCTGGttt                                                       <  1:5581545‑M2/40‑1 (MQ=255)
                                         tgttgtgtggaattgtgagcggataacaatttcacacaggaaacagctatgTTAAAACGTATCAAAATTGTGACCAGCTTACTGCTGGTTTTg                                                     >  2:2535334‑M2/52‑93 (MQ=255)
                                         tcctttccAGGCCGAAAATCTTGCATCGGTCCACAGGAAAGAGAAACCATGTTAAAACGTATCAAAATTGTGACCAGCTTACTGCTGGTTTTg                                                     >  1:4477737/1‑93 (MQ=255)
                                          gttgtgtggaattgtgagcggataacaatttcacacaggaaacagctatgTTAAAACGTATCAAAATTGTGACCAGCTTACTGCTGGTTTTgg                                                    >  1:5225543‑M2/51‑93 (MQ=255)
                                              tgtggaattgtgagcggataacaatttcacacaggaaacagctatgTTAAAACGTATCAAAATTGTGACCAGCTTACTGCTGGTTTTGGCCGt                                                <  2:789487‑M2/47‑1 (MQ=255)
                                              tgtggaattgtgagcggataacaatttcacacaggaaacagctatgTTAAAACGTATCAAAATTGTGACCAGCTTACTGCTGGTTTTGGCCGt                                                >  1:5788849‑M2/47‑93 (MQ=255)
                                              tgtggaattgtgagcggataacaatttcacacaggaaacagctatgTTAAAACGTATCAAAATTGTGACCAGCTTACTGCTGGTTTTGGCCGt                                                <  1:1946089‑M2/47‑1 (MQ=255)
                                               gtggaattgtgagcggataacaatttcacacaggaaacagctatgTTAAAACGTATCAAAATTGTGACCAGCTTACTGCTGGTTTTGGCCGtt                                               <  2:2844372‑M2/48‑1 (MQ=255)
                                                  gaattgtgagcggataacaatttcacacaggaaacagctatgTTAAAACGTATCAAAATTGTGACCAGCTTACTGCTGGTTTTGGCCGttttt                                            >  2:7648848‑M2/43‑93 (MQ=255)
                                                  gaattgtgagcggataacaatttcacacaggaaacagctatgTTAAAACGTATCAAAATTGTGACCAGCTTACTGCTGGCTTTGGCCGttttt                                            <  1:7571125‑M2/51‑1 (MQ=255)
                                                   gCCGAAAATCTTGCATCGGTCCACAGGAAAGAGAAACCATGTTAAAACGTATCAAAATTGTGACCAGCTTACTGCTGGTTTTGGCCGTTTTTg                                           >  2:4988164/1‑93 (MQ=255)
                                                   gCCGAAAATCTTGCATCGGTCCACAGGAAAGAGAAACCATGTTAAAACGTATCAAAATTGTGACCAGCTTACTGCTGGTTTTGGCCGTTTTTg                                           <  1:7052966/93‑1 (MQ=255)
                                                   gCCGAAAATCTTGCATCGGTCCACAGGAAAGAGAAACCATGTTAAAACGTATCAAAATTGTGACCAGCTTACTGCTGGTTTTGGCCGTTTTTg                                           <  2:7495141/93‑1 (MQ=255)
                                                     ttgtgagcggataacaatttcacacaggaaacagctatgTTAAAACGTATCAAAATTGTGACCAGCTTACTGCTGGTTTTGGCCGTTTTTGGc                                         >  1:3886778‑M2/40‑93 (MQ=255)
                                                     ttgtgagcggataacaatttcacacaggaaacagctatgTTAAAACGTATCAAAATTGTGACCAGCTTACTGCTGGTTTTGGCCGTTTTTGGc                                         >  2:4519999‑M2/40‑93 (MQ=255)
                                                      gAAAATCTTGCATCGGTCCACAGGAAAGAGAAACCATGTTAAAACGTATCAAAATTGTGACCAGCTTACTGCTGGTTTTGGCCGTTTTTGGcc                                        >  2:2712178/1‑93 (MQ=255)
                                                      gAAAATCTTGCATCGGTCCACAGGAAAGAGAAACCATGTTAAAACGTATCAAAATTGTGACCAGCTTACTGCTGGTTTTGGCCGTTTTTGGcc                                        >  1:3800107/1‑93 (MQ=255)
                                                       aaaaTCTTGCATCGGTCCACAGGAAAGAGAAACCATGTTAAAACGTATCAAAATTGTGACCAGCTTACTGCTGGTTTTGGCCGTTTTTGGCCt                                       >  2:3802731/1‑93 (MQ=255)
                                                         aaTCTTGCATCGGTCCACAGGAAAGAGAAACCATGTTAAAACGTATCAAAATTGTGACCAGCTTACTGCTGGTTTTGGCCGTTTTTGGCCttt                                     <  2:7211490/93‑1 (MQ=255)
                                                          aTCTTGCATCGGTCCACAGGAAAGAGAAACCATTTTAAAACGTATCAAAATTGTGACCAGCTTACTGCTGGTTTTGGCCGTTTTTGGCCtttt                                    >  2:4785045/1‑93 (MQ=255)
                                                          aTCTTGCATCGGTCCACAGGAAAGAGAAACCATGTTAAAACGTATCAAAATTGTGACCAGCTTACTGCTGGTTTTGGCCGTTTTTGGCCtttt                                    >  2:3924669/1‑93 (MQ=255)
                                                          aTCTTGCATCGGTCCACAGGAAAGAGAAACCATGTTAAAACGTATCAAAATTGTGACCAGCTTACTGCTGGTTTTGGCCGTTTTTGGCCtttt                                    <  2:5928160/93‑1 (MQ=255)
                                                            cTTGCATCGGTCCACAGGAAAGAGAAACCATGTTAAAACGTATCAAAATTGTGACCAGCTTACTGCTGGTTTTGGCCGTTTTTGGCCTTTTAc                                  <  1:6623156/93‑1 (MQ=255)
                                                             ggataacaatttcacacaggaaacagctatgTTAAAACGTATCAAAATTGTGACCAGCTTACTGCTGGTTTTGGCCGTTTTTGGCCTTTTACa                                 >  2:6709194‑M2/32‑93 (MQ=255)
                                                             ggataacaatttcacacaggaaacagctatgTTAAAACGTATCAAAATTGTGACCAGCTTACTGCTGGGTTTGGCCGTTTTTGGCCTTTTACa                                 >  1:2843163‑M2/32‑93 (MQ=255)
                                                               gCATCGGTCCACAGGAAAGAGAAACCATGTTAAAACGTATCAAAATTGTGACCAGCTTACTGCTGGTTTTGGCCGTTTTTGGCCTTTTACAAc                               >  1:6327607/1‑93 (MQ=255)
                                                                cATCGGTCCACAGGAAAGAGAAACCATGTTAAAACGTATCAAAATTGTGACCAGCTTACTGCTGGTTTTGGCCGTTTTTGGCCTTTTACAACt                              <  2:4663641/93‑1 (MQ=255)
                                                                 aacaatttcacacaggaaacagctatgTTAAAACGTATCAAAATTGTGACCAGCTTACTGCTGGTTTTGGCCGTTTTTGGCCTTTTACAACTg                             >  1:2615705‑M2/28‑93 (MQ=255)
                                                                  acaatttcacacaggaaacagctatgTTAAAACGTATCAAAATTGTGACCAGCTTACTGCTGGTTTTGGCCGTTTTTGGCCTTTTACAACTGa                            >  2:1660190‑M2/27‑93 (MQ=255)
                                                                    aatttcacacaggaaacagctatgTTAAAACGTATCAAAATTGTGACCAGCTTACTGCTGGTTTTGGCCGTTTTTGGCCTTTTACAACTGACa                          <  1:7118895‑M2/69‑1 (MQ=255)
                                                                     atttcacacaggaaacagctatgTTAAAACGTATCAAAATTGTGACCAGCTTACTGCTGGTTTTGGCCGTTTTTGGCCTTTTACAACTGACAt                         <  1:5439260‑M2/70‑1 (MQ=255)
                                                                      tttcacacaggaaacagctatgTTAAAACGTATCAAAATTGTGACCAGCTTACTGCTGGTTTTGGCCGTTTTTGGCCTTTTACAACTGACATc                        >  2:526311‑M2/23‑93 (MQ=255)
                                                                      tttcacacaggaaacagctatgTTAAAACGTATCAAAATTGTGACCAGCTTACTGCTGGTTTTGGCCGTTTTTGGCCTTTTACAACTGACATc                        <  1:3531087‑M2/71‑1 (MQ=255)
                                                                       ttcacacaggaaacagctatgTTAAAACGTATCAAAATTGTGACCAGCTTACTGCTGGTTTTGGCCGTTTTTGGCCTTTTACAACTGACATCa                       <  1:6168383‑M2/72‑1 (MQ=255)
                                                                        tcacacaggaaacagctatgTTAAAACGTATCAAAATTGTGACCAGCTTACTGCTGGTTTTGGCCGTTTTTGGCCTTTTACAACTGACATCAg                      <  2:6117329‑M2/73‑1 (MQ=255)
                                                                        cacaGGAAAGAGAAACCATGTTAAAACGTATCAAAATTGTGACCAGCTTACTGCTGGTTTTGGCCGTTTTTGGCCTTTTACAACTGACATCAg                      >  2:5655412/1‑93 (MQ=255)
                                                                          caGGAAAGAGAAACCATGTTAAAACGTATCAAAATTGTGACCAGCTTACTGCTGGTTTTGGCCGTTTTTGGCCTTTTACAACTGACATCAGGc                    <  2:1050584/93‑1 (MQ=255)
                                                                          acacaggaaacagctatgTTAAAACGTATCAAAATTGTGACCAGCTTACTGCTGGTTTTGGCCGTTTTTGGCCTTTTACAACTGACATCAGGc                    <  1:47526‑M2/75‑1 (MQ=255)
                                                                           cacaggaaacagctatgTTAAAACGTATCAAAATTGTGACCAGCTTACTGCTGGTTTTGGCCGTTTTTGGCCTTTTACAACTGACATCAGGCg                   >  2:4336636‑M2/18‑93 (MQ=255)
                                                                            ggAAAGAGAAACCATGTTAAAACGTATCAAAATTGTGACCAGCTTACTGCTGGTTTTGGCCGTTTTTGGCCTTTTACAACTGACATCAGGCgg                  >  1:3200080/1‑93 (MQ=255)
                                                                            ggAAAGAGAAACCATGTTAAAACGTATCAAAATTGTGACCAGCTTACTGCTGGTTTTGGCCGTTTTTGGCCTTTTACAACTGACATCAGGCgg                  >  1:2687964/1‑93 (MQ=255)
                                                                              aggaaacagctatgTTAAAACGTATCAAAATTGTGACCAGCTTACTGCTGGTATTGGCCGTTTTTGGCCTTTTACAACTGACATCAGGCGGTc                <  2:620879‑M2/79‑1 (MQ=255)
                                                                                 aaacagctatgTTAAAACGTATCAAAATTGTGACCAGCTTACTGCTGGTTTTGGCCGTTTTTGGCCTTTTACAACTGACATCAGGCGGTCTGt             <  2:1560828‑M2/82‑1 (MQ=255)
                                                                                    aaaCCATGTTAAAACGTATCAAAATTGTGACCAGCTTACTGCTGGTTTTGGCCGTTTTTGGCCTTTTACAACTGACATCAGGCGGTCTGttat          >  1:4244453/1‑91 (MQ=255)
                                                                                       ctatgTTAAAACGTATCAAAATTGTGACCAGCTTACTGCTGGTTTTGGCCGTTTTTGGCCTTTTACAACTGACATCAGGCGGTCTGTTCTTTa       <  1:5048586‑M2/88‑1 (MQ=255)
                                                                                       ccATGTTAAAACGTATCAAAATTGTGACCAGCTTACTGCTGGTTTTGGCCGTTTTTGGCCTTTTACAACTGACATCAGGCGGTCTGTTCTTTa       <  2:84114/93‑1 (MQ=255)
                                                                                         atgTTAAAACGTATCAAAATTGTGACCAGCTTACTGCTGGTTTTGGCCGTTTTTGGCCTTTTACAACTGACATCAGGCGGTCTGTTCTTTAAt     <  2:5138151‑M2/90‑1 (MQ=255)
                                                                                         atgTTAAAACGTATCAAAATTGTGACCAGCTTACTGCTGGTTTTGGCCGTTTTTGGCCTTTTACAACTGACATCAGGCGGTCTGTTCTTTAAt     >  2:4892700‑M2/4‑93 (MQ=255)
                                                                                         atgTTAAAACGTATCAAAATTGTGACCAGCTTACTGCTGGCTTTGGCCGTTTTTGGCCTTTTACAACTGACATCAGGCGGTCTGTTCTTTAAt     >  2:6346160‑M2/4‑93 (MQ=255)
                                                                                          tgTTAAAACGTATCAAAATTGTGACCAGCTTACTGCTGGTTTTGGCCGTTTTTGGCCTTTTACAACTGACATCAGGCGGTCTGTTCTTTAATg    >  2:3653678‑M2/3‑93 (MQ=255)
                                                                                           gTTAAAACGTATCAAAATTGTGACCAGCTTACTGCTGGTTTTGGCCGTTTTTGGCCTTTTACAACTGACATCAGGCGGTCTGTTCTTTAATGc   >  1:4840680‑M2/2‑93 (MQ=255)
                                                                                            ttAAAACGTATCAAAATTGTGACCAGCTTACTGCTGGTTTTGGCCGTTTTTGGCCTTTTACAACTGCCATCAGGCGGTCTGTTTTTTAATGct  >  2:1722366/1‑92 (MQ=255)
                                                                                            |                                                                                            
ATTCACTCGGCGTAATCTCCGCGGGATATTCATAAAGTTTTTCCTTTCCAGGCCGAAAATCTTGCATCGGTCCACAGGAAAGAGAAACCATGTTAAAACGTATCAAAATTGTGACCAGCTTACTGCTGGTTTTGGCCGTTTTTGGCCTTTTACAACTGACATCAGGCGGTCTGTTCTTTAATGCC  >  NC_000913/4589138‑4589322

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 31 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.