| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | 269765 = | NA (NA) | 188 (1.030) | 106/184 | 0.2 | 96.9% | coding (300/405 nt) | yi91a | hypothetical protein |
| ? | NC_000913 | = 370983 | 6 (0.030) | coding (536/882 nt) | mhpC | 2‑hydroxy‑6‑ketonona‑2,4‑dienedioic acid hydrolase | |||||
Only 100 of 360 total aligned reads displayed.
CATGAGTTTGTTTACGCCGATGCCAACCGAAGGTATTAAGCGACTGAATCAGCTTTATCGTCAGCCGACTATCGAAAACCTGAAGCTGATGATGGATATCTTCGTTTTTGATACCAGCGATTTGACCGACGCCCTGTTTGAAGCGCGCCTGAATAATATGCTGTCGCGCCGCGATCACCTGGAAA > NC_000913/370891‑371075 | cagctaaacaacagaccgagaaagacactgaagttcaaaacaccgaaagagataattgaaaggggtgttgcattgacagattgaatctacaAt < 1:57410‑M2/2‑1 (MQ=255)cATGAGTTTGTTTACGCCGATGCCAACCGAAGGTATTAAGCGACTGAATCAGCTTTATCGTCAGCCGACTATCGAAAACCTGAAGCTgatgat > 1:2681648/1‑93 (MQ=255) agctaaacaacagaccgagaaagacactgaagttcaaaacaccgaaagagataattgaaaggggtgttgcattgacagattgaatctacaATg < 1:3575770‑M2/3‑1 (MQ=255) aTGAGTTTGTTTACGCCGATGCCAACCGAAGGTATTAAGCGACTGAATCAGCTTTATCGTCAGCCGACTATCGAAAACCTGAAGCTGATGATt > 2:3531103‑M2/1‑92 (MQ=255) aTGAGTTTGTTTACGCCGATGCCAACCGAAGGTATTAAGCGACTGAATCAGCTTTATCGTCAGCCGACTATCGAAAACCTGAAGCTGATGATt < 1:758388‑M2/93‑2 (MQ=255) tGAGTTTGTTTACGCCGATGCCAACCGAAGGTATTAAGCGACTGAATCAGCTTTATCGTCAGCCGACTATCGAAAACCTGAAGCTGATGATtg > 2:437271‑M2/1‑91 (MQ=255) tGAGTTTGTTTACGCCGATGCCAACCGAAGGTATTAAGCGACTGAATCAGCTTTATCGTCAGCCGACTATCGAAAACCTGAAGCTGATGATtg < 2:1853582‑M2/93‑3 (MQ=255) gctaaacaacagaccgagaaagacactgaagttcaaaacaccgaaagagataattgaaaggggtgttgcattgacagattgaatctacaATgg > 1:2817267‑M2/90‑93 (MQ=255) gAGTTTGTTTACGCCGATGCCAACCGAAGGTATTAAGCGACTGAATCAGCTTTATCGTCAGCCGACTATCGAAAACCTGAAGCTGATGATtgt < 2:878296‑M2/93‑4 (MQ=255) ctaaacaacagaccgagaaagacactgaagttcaaaacaccgaaagagataattgaaaggggtgttgcattgacagattgaatctacaATGGa < 2:2119927‑M2/5‑1 (MQ=255) aGTTTGTTTACGCCGATGCCAACCGAAGGTATTAAGCGACTGAATCAGCTTTATCGTCAGCCGACTATCGAAAACCTGAAGCTGATGATtgta < 1:4370030‑M2/93‑5 (MQ=255) caacagaccgagaaagacactgaagttcaaaacaccgaaagagataattgaaaggggtgttgcattgacagattgaatctacaATGGATATCt < 1:4072411‑M2/10‑1 (MQ=255) gtttACGCCGATGCCAACCGAAGGTATTAAGCGACTGAATCAGCTTTATCGTCAGCCGACTATCGAAAACCTGAAGCTGATGATtgtagattc > 1:2562870‑M2/1‑84 (MQ=255) aacagaccgagaaagacactgaagttcaaaacaccgaaagagataattgaaaggggtgttgcattgacagattgaatctacaATGGATATCtt < 2:2921311‑M2/11‑1 (MQ=255) aacagaccgagaaagacactgaagttcaaaacaccgaaagagataattgaaaggggtgttgcattgacagattgaatctacaATGGATATCtt < 1:3231449‑M2/11‑1 (MQ=255) cagaccgagaaagacactgaagttcaaaacaccgaaagagataattgaaaggggtgttgcattgacagattgaatctacaATGGATATCTTCg < 1:4234917‑M2/13‑1 (MQ=255) gaccgagaaagacactgaagttcaaaacaccgaaagagataattgaaaggggtgttgcattgacagattgaatctacaATGGATATCTTCGtt > 2:4296897‑M2/79‑93 (MQ=255) aCGCCGATGCCAACCGAAGGTATTAAGCGACTGAATCAGCTTTATCGTCAGCCGACTATCGAAAACCTGAAGCTGATGATtgtagattcaatt > 2:1518354‑M2/1‑80 (MQ=255) aCGCCGATGCCAACCGAAGGTATTAAGCGACTGAATCAGCTTTATCGTCAGCCGACTATCGAAAACCTGAAGCTGATGATtgtagattcaatt > 1:4610373‑M2/1‑80 (MQ=255) accgagaaagacactgaagttcaaaacaccgaaagagataattgaaaggggtgttgcattgacagattgaatctacaATGGATATCTTCGttt > 1:3176226‑M2/78‑93 (MQ=255) gagaaagacactgaagttcaaaacaccgaaagagataattgaaaggggtgttgcattgacagattgaatctacaATGGATATCTTCGTTTTTg > 1:2756112‑M2/75‑93 (MQ=255) cGATGCCAACCGAAGGTATTAAGCGACTGAATCAGCTTTATCGTCAGCCGACTATCGAAAACCTGAAGCTGATGATtgtagattcaattggtc < 1:2299615‑M2/93‑18 (MQ=255) gATGCCAACCGAAGGTATTAAGCGACTGAATCAGCTTTATCGTCAGCCGACTATCGAAAACCTGAAGCTGATGATtgtagattcaattggtca < 1:1223018‑M2/93‑19 (MQ=255) agaaagaccctgaagttcaaaacaccgaaagagataattgaaaggggtgttgcattgacagattgaatctacaATGGATATCTTCGTTTTTGa > 2:4548856‑M2/74‑93 (MQ=255) gaaagacactgaagttcaaaacaccgaaagagataattgaaaggggtgttgcattgacagattgaatctacaATGGATATCTTCGTTTTTGAt > 2:2595242‑M2/73‑93 (MQ=255) tGCCAACCGAAGGTATTAAGCGACTGAATCAGCTTTATCGTCAGCCGACTATCGAAAACCTGAAGCTGATGATtgtagattcaattggtcaac < 2:2976894‑M2/93‑21 (MQ=255) tGCCAACCGAAGGTATTAAGCGACTGAATCAGCTTTATCGTCAGCCGACTATCGAAAACCTGAAGCTGATGATtgtagattcaattggtcaac < 2:1782490‑M2/93‑21 (MQ=255) aagacactgaagttcaaaacaccgaaagagataattgaaaggggtgttgcattgacagattgaatctacaATGGATATCTTCGTTTTTGATAc > 1:3485711‑M2/71‑93 (MQ=255) aagacactgaagttcaaaacaccgaaagagataattgaaaggggtgttgcattgacagattgaatctacaATGGATATCTTCGTTTTTGATAc > 1:1143856‑M2/71‑93 (MQ=255) aagacactgaagttcaaaacaccgaaagagataattgaaaggggtgttgcattgacagattgaatctacaATGGATATCTTCGTTTTTGATAc < 1:3669339‑M2/23‑1 (MQ=255) agacactgaagttcaaaacaccgaaagagataattgaaaggggtgttgcattgacagattgaatctacaATGGATATCTTCGTTTTTGATAcc < 2:2702961‑M2/24‑1 (MQ=255) agacactgaagttcaaaacaccgaaagagataattgaaaggggtgttgcattgacagattgaatctacaATGGATATCTTCGTTTTTGATAcc > 2:2214687‑M2/70‑93 (MQ=255) gacactgaagttcaaaacaccgaaagagataattgaaaggggtgttgcattgacagattgaatctacaATGGATATCTTCGTTTTTGATACCa < 2:2408397‑M2/25‑1 (MQ=255) acactgaagttcaaaacaccgaaagagataattgaaaggggtgttgcattgacagattgaatctacaATGGATATCTTCGTTTTTGATACCAg < 1:1615735‑M2/26‑1 (MQ=255) aaCCGAAGGTATTAAGCGACTGAATCAGCTTTATCGTCAGCCGACTATCGAAAACCTGAAGCTGATGATtgtagattcaattggtcaacgcaa < 2:683420‑M2/93‑25 (MQ=255) ctgaagttcaaaacaccgaaagagataattgaaaggggtgttgcattgacagattgaatctacaATGGATATCTTCGTTTTTGATACCAGCGa > 1:4451383‑M2/65‑93 (MQ=255) gAAGGTATTAAGCGACTGAATCAGCTTTATCGTCAGCCGACTATCGAAAACCTGAAGCTGATGATtgtagattcaattggtcaacgcaacagt < 1:4410920‑M2/93‑29 (MQ=255) gaagttcaaaacaccgaaagagataattgaaaggggggttgcattgacagattgaatctacaATGGATATCGTCGTTTTTGATACCAGCGttt > 2:2672268‑M2/63‑93 (MQ=255) aaGGTATTAAGCGACTGAATCAGCTTTATCGTCAGCCGACTATCGAAAACCTGAAGCTGATGATtgtagattcaattggtcaacgcaacagtt < 2:1583829‑M2/93‑30 (MQ=255) gTATTAAGCGACTGAATCAGCTTTATCGTCAGCCGACTATCGAAAACCTGAAGCTGATGATtgtagattcaattggtcaacgcaacagttatg < 2:1090808‑M2/93‑33 (MQ=255) tATTAAGCGACTGAATCAGCTTTATCGTCAGCCGACTATCGAAAACCTGAAGCTGATGATtgtagattcaattggtcaacgcaacagttatgt > 2:3137389‑M2/1‑60 (MQ=255) tAAGCGACTGAATCAGCTTTATCGTCAGCCGACTATCGAAAACCTGAAGCTGATGATtgtagattcaattggtcaacgcaacagttatgtgaa > 1:3349601‑M2/1‑57 (MQ=255) aGCGACTGAATCAGCTTTATCGTCAGCCGACTATCGAAAACCTGAAGCTGATGATtgtagattcaattggtcaacgcaacagttatgtgaaaa < 1:3983849‑M2/93‑39 (MQ=255) aGCGACTGAATCAGCTTTATCGTCAGCCGACTATCGAAAACCTGAAGCTAATGATtgtagattcaattggtcaacgcaacagttatgtgaaaa < 2:2509304‑M2/93‑39 (MQ=255) accgaaagagataattgaaaggggtgttgcattgacagattgaatctacaATGGATATCTTCGTTTTTGATACCAGCGATTTGACCGACGccc < 1:2110252‑M2/43‑1 (MQ=255) cTGAATCAGCTTTATCGTCAGCCGACTATCGAAAACCTGAAGCTGATGATtgtagattcaattggtcaacgcaacagttatgtgaaaacatgg < 1:3613178‑M2/93‑44 (MQ=255) cTGAATCAGCTTTATCGTCAGCCGACTATCGAAAACCTGAAGCTGATGATtgtagattcaattggtcaacgcaacagttatgtgaaaacatgg > 1:4198898‑M2/1‑50 (MQ=255) cTGAATCAGCTTTATCGTCAGCCGACTATCGAAAACCTGAAGCTGATGATtgtagattcaattggtcaacgcaacagttatgtgaaaacatgg > 2:3276618‑M2/1‑50 (MQ=255) tGAATCAGCTTTATCGTCAGCCGACTATCGAAAACCTGAAGCTGATGATtgtagattcaattggtcaacgcaacagttatgtgaaaacatggg < 1:259018‑M2/93‑45 (MQ=255) gAATCAGCTTTATCGTCAGCCGACTATCGAAAACCTGAAGCTGATGATtgtagattcaattggtcaacgcaacagttatgtgaaaacatgggg > 2:486896‑M2/1‑48 (MQ=255) aagagataattgaaaggggtgttgcattgacagattgaatctacaATGGATATCTTCGTTTTTGATACCAGCGATTTGACCGACGCCCTGttt < 2:2584465‑M2/48‑1 (MQ=255) aaTCAGCTTTATCGTCAGCCGACTATCGAAAACCTGAAGCTGATGATtgtagattcaattggtcaacgcaacagttatgtgaaaacatggggt > 1:1815522‑M2/1‑47 (MQ=255) tCAGCTTTATCGTCAGCCGACTATCGAAAACCTGAAGCTGATGATtgtagattcaattggtcaacgcaacagttatgtgaaaacatggggttg < 1:1920458‑M2/93‑49 (MQ=255) tCAGCTTTATCGTCAGCCGACTATCGAAAACCTGAAGCTGATGATtgtagattcaattggtcaacgcaacagttatgtgaaaacatggggttg < 1:958200‑M2/93‑49 (MQ=255) gagataattgaaaggggtgttgcattgacagattgaatctacaATGGATATCTTCGTTTTTGATACCAGCGATTTGACCGACGCCCTGTTTGa > 2:1655296‑M2/44‑93 (MQ=255) gagataattgaaaggggtgttgcattgacagattgaatctacaATGGATATCTTCGTTTTTGATACCAGCGATTTGACCGACGCCCTGTTTGa > 2:1180573‑M2/44‑93 (MQ=255) gataattgaaaggggtgttgcattgacagattgaatctacaATGGATATCTTCGTTTTTGATACCAGCGATTTGACCGACGCCCTGTTTGAAg < 2:553127‑M2/52‑1 (MQ=255) aGCTTTATCGTCAGCCGACTATCGAAAACCTGAAGCTGATGATtgtagattcaattggtcaacgcaacagttatgtgaaaacatggggttgcg < 2:4255819‑M2/93‑51 (MQ=255) taattgaaaggggtgttgcattgacagattgaatctacaATGGATATCTTCGTTTTTGATACCAGCGATTTGACCGACGCCCTGTTTGAAgcg > 2:390092‑M2/40‑93 (MQ=255) taattgaaaggggtgttgcattgacagattgaatctacaATGGATATCTTCGTTTTTGATACCAGCGATTTGACCGACGCCCTGTTTGAAgcg < 2:3704715‑M2/54‑1 (MQ=255) taattgaaaggggtgttgcattgacagattgaatctacaATGGATATCTTCGTTTTTGATACCAGCGATTTGACCGACGCCCTGTTTGAAgcg > 2:3157387‑M2/40‑93 (MQ=255) attgaaaggggtgttgcattgacagattgaatctacaATGGATATCTTCGTTTTTGATACCAGCGATTTGACCGACGCCCTGTTTGAAgcgcg > 2:3960267‑M2/38‑93 (MQ=255) ttgaaaggggtgttgcattgacagattgaatctacaATGGATATCTTCGTTTTTGATACCAGCGATTTGACCGACGCCCTGTTTGAAgcgcgc > 2:2804494‑M2/37‑93 (MQ=255) tgaaaggggtgttgcattgacagattgaatctacaATGGATATCTTCGTTTTTGATACCAGCGATTTGACCGACGCCCTGTTTGAAGCGCGcc < 1:3934681‑M2/58‑1 (MQ=255) aTCGTCAGCCGACTATCGAAAACCTGAAGCTGATGATtgtagattcaattggtcaacgcaacagttatgtgaaaacatggggttgcggaggtt < 1:3839813‑M2/93‑57 (MQ=255) tCGTCAGCCGACTATCGAAAACCTGAAGCTGATGATtgtagattcaattggtcaacgcaacagttatgtgaaaacatggggttgcggaggttt > 2:4508165‑M2/1‑36 (MQ=255) gaaaggggtgttgcattgacagattgaatctacaATGGATATCTTCGTTTTTGATACCAGCGATTTGACCGACGCCCTGTTTGAAGCGCGCCt > 2:3816808‑M2/35‑93 (MQ=255) aaggggtgttgcattgacagattgaatctacaATGGATATCTTCGTTTTTGATACCAGCGATTTGACCGACGCCCTGTTTGAAGCGCGCCTGa > 1:4511506‑M2/33‑93 (MQ=255) tCAGCCGACTATCGAAAACCTGAAGCTGATGATtgtagattcaattggtcaacgcaacagttatgtgaaaacatggggttgcggaggtttttt > 2:3080489‑M2/1‑33 (MQ=255) aggggtggtgcattgacagattgaatctacaATGGATATCTTCGTTTTTGATACCAGCGATTTGACCGACGCCCTGTTTGAAGCGCGCCTGaa < 1:1549686‑M2/62‑1 (MQ=255) ggggtgttgcattgacagattgaatctacaATGGATATCTTCGTTTTTGATACCAGCGATTTGACCGACGCCCTGTTTGAAGCGCGCCTGaat > 1:2987060‑M2/31‑93 (MQ=255) ggggtgttgcattgacagattgaatctacaATGGATATCTTCGTTTTTGATACCAGCGATTTGACCGACGCCCTGTTTGAAGCGCGCCTGaat > 1:2946313‑M2/31‑93 (MQ=255) gCCGACTATCGAAAACCTGAAGCTGATGATtgtagattcaattggtcaacgcaacagttatgtgacaacatggggttgcggaggttttttgaa < 2:1920157‑M2/93‑64 (MQ=255) gtgttgcattgacagattgaatctacaATGGATATCTTCGTTTTTGATACCAGCGATTTGACCGACGCCCTGTTTGAAGCGCGCCTGaataat < 2:4149897‑M2/66‑1 (MQ=255) cGACTATCGAAAACCTGAAGCTGATGATtgtagattcaattggtcaacgcaacagttatgtgaaaacatggggttgcggaggttttttgaatg > 2:735055‑M2/1‑28 (MQ=255) cGACTATCGAAAACCTGAAGCTGATGATtgtagattcaattggtcaacgcaacagttatgtgaaaacatggggttgcggaggttttttgaatg < 1:1896185‑M2/93‑66 (MQ=255) aCTATCGAAAACCTGAAGCTGATGATtgtagattcaattggtcaacgcaacagttatgtgaaaacatggggttgcggaggttttttgaatgag > 2:4642377‑M2/1‑26 (MQ=255) cTATCGAAAACCTGAAGCTGATGATtgtagattcaattggtcaacgcaacagttatgtgaaaacatggggttgcggaggttttttgaatgaga < 1:490725‑M2/93‑69 (MQ=255) ttgacagattgaatctacaATGGATATCTTCGTTTTTGATACCAGCGATTTGACCGACGCCCTGTTTGAAGCGCGCCTGAATAATATGCTGTc < 2:2765696‑M2/74‑1 (MQ=255) ttgacagattgaatctacaATGGATATCTTCGTTTTTGATACCAGCGATTTGACCGACGCCCTGTTTGAAGCGCGCCTGAATAATATGCTGTc > 1:3875584‑M2/20‑93 (MQ=255) gAAAACCTGAAGCTGATGATtgtagattcaattggtcaacgcaacagttatgtgaaaacatggggttgcggaggttttttgaatgagacgaac > 2:3414710‑M2/1‑20 (MQ=255) aaCCTGAAGCTGATGATtgtagattcaattggtcaacgcaacagttatgtgaaaacatggggttgcggaggttttttgaatgagacgaacatt < 2:1427943‑M2/93‑77 (MQ=255) cTGAAGCTGATGATtgtagattcaattggtcaacgcaacagttatgtgaaaacatggggttgcggaggttttttgactgagacgaacatttac < 2:366545‑M2/93‑80 (MQ=255) tgaatctacaATGGATATCTTCGTTTTTGATACCAGCGATTTGACCGACGCCCTGTTTGAAGCGCGCCTGAATAATATGCTGTCGCGCCGCGa < 1:1463967‑M2/83‑1 (MQ=255) gaatctacaATGGATATCTTCGTTTTTGATACCAGCGATTTGACCGACGCCCTGTTTGAAGCGCGCCTGAATAATATGCTGTCGCGCCGCGAt < 2:3475564‑M2/84‑1 (MQ=255) gaatctacaATGGATATCTTCGTTTTTGATACCAGCGATTTGACCGACGCCCTGTTTGAAGCGCGCCTGAATAATATGCTGTCGCGCCGCGAt > 1:859157‑M2/10‑93 (MQ=255) aaGCTGATGATtgtagattcaattggtcaacgcaacagttatgtgaaaacatggggttgcggaggttttttgaatgagacgaacatttacagc > 1:652506‑M2/1‑11 (MQ=255) aatctacaATGTATATCTTCGTTTTTGATACCAGCGATTTGACCGACGCCCTGTTTGAAGCGCGCCTGAATAATATGCTGTCTCGCCGCGATc < 2:2355602‑M2/85‑1 (MQ=255) aGCTGATGATtgtagattcaattggtcaacgcaacagttatgtgaaaacatggggttgcggaggttttttgaatgagacgaacatttacagca < 1:3087423‑M2/93‑84 (MQ=255) atctacaATGGATATCTTCGTTTTTGATACCAGCGATTTGACCGACGCCCTGTTTGAAGCGCGCCTGAATAATATGCTGTCGCGCCGCGATCa < 1:2893677‑M2/86‑1 (MQ=255) tctacaATGGATATCTTCGTTTTTGATACCAGCGATTTGACCGACGCCCTGTTTGAAGAGCGCCTGAATAATATGCTGTCGCGCCGCGATCAc > 1:1973686‑M2/7‑93 (MQ=255) cTGATGATtgtagattcaattggtcaacgcaacagttatgtgaaaacatggggttgcggaggttttttgaatgagacgaacatttacagcaga > 2:1315014‑M2/1‑8 (MQ=255) tgatgaTtgtagattcaattggtcaacgcaacagttatgtgaaaacatggggttgcggaggttttttgaatgagacgaacatttacagcagag < 1:3762721‑M2/93‑87 (MQ=255) ctacaATGGATATCTTCGTTTTTGATACCAGCGATTTGACCGACGCCCTGTTTGAAGCGCGCCTGAATAATATGCTGTCGCGCCGCGATCAcc < 2:3328579‑M2/88‑1 (MQ=255) acaATGGATATCTTCGTTTTTGATACCAGCGATTTGACCGACGCCCTGTTTGAAGCGCGCCTGAATAATATGCTGTCGCGCCGCGATCACCTg > 2:4414168‑M2/4‑93 (MQ=255) tgattgtagattcaattggtcaacgcaacagttatgtgaaaacatggggttgcggaggttttttgaatgagacgaacatttacagcagaggaa < 1:2394094‑M2/93‑90 (MQ=255) ttgtagattcaattggtcaacgcaacagttatgtgaaaacatggggttgcggaggttttttgaatgagacgaacatttacagcagaggaaaaa < 2:3851065‑M2/93‑93 (MQ=255) ttgtagattcaattggtcaacgcaacagttatgtgaaaacatggggttgcggaggttttttgaatgagacgaacatttacagcagaggaaaaa > 2:3186561‑M2/1‑1 (MQ=255) ttgtagattcaattggtcaacccacgagttatgtgaaaacatgtggttgcggaggttttttgaatgagacgaacatttacagcagatgaaaaa > 2:2902712‑M2/1‑1 (MQ=255) tgGATATCTTCGTTTTTGATACCAGCGATTTGACCGACGCCCTGTTTGAAGCGCGCCTGAATAATATGCTGTCGCGCCGCGATCACCTGGaaa > 2:438929/1‑93 (MQ=255) | CATGAGTTTGTTTACGCCGATGCCAACCGAAGGTATTAAGCGACTGAATCAGCTTTATCGTCAGCCGACTATCGAAAACCTGAAGCTGATGATGGATATCTTCGTTTTTGATACCAGCGATTTGACCGACGCCCTGTTTGAAGCGCGCCTGAATAATATGCTGTCGCGCCGCGATCACCTGGAAA > NC_000913/370891‑371075 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 20 ≤ ATCG/ATCG < 29 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |