Predicted mutation
evidence seq id position mutation annotation gene description
MC JC NC_000913 3,156,257 (CCA)2→1 coding (594‑596/930 nt) yqhG → hypothetical protein

Missing coverage evidence...
   seq id start end size ←reads reads→ gene description
* * ÷ NC_000913 3156257 3156259 3 208 [0] [0] 209 yqhG hypothetical protein

New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913 = 31562560 (0.000)201 (1.140) 111/178 0.1 100% coding (593/930 nt) yqhG hypothetical protein
?NC_000913 3156260 = 0 (0.000)coding (597/930 nt) yqhG hypothetical protein

Only 100 of 209 total aligned reads displayed.

GCCGGAAGCCTTTGTTGCCGAACTCTTTGAACATATTGCTGATTATAGCTGGCCGTGGACGTGGGTGGTTTCCGACTCTTACCGCCACCAGGCGGTTAATGCCTTCTATAAAACCACCTTCAAGACGGCCAATAATCCCGATGAAGATATGCAAATAGAACGGCAATTTATTTACGACAATCC  >  NC_000913/3156170‑3156352
                                                                                          |                                                                                            
acagccggaagcctttgttgccgaactctttgaacatattgctgattatagctggccgtggacgtgggtggtttccgactcttaccgccaGGc                                                                                            <  1:2918107‑M2/3‑1 (MQ=255)
acagccggaagcctttgttgccgaactctttgaacatattgctgattatagctggccgtggacgtgggtggtttccgactcttaccgccaGGc                                                                                            <  1:1738734‑M2/3‑1 (MQ=255)
 cagccggaagcctttgttgccgaactctttgaacatattgctgattatagctggccgtggacgtgggtggtttccgactcttaccgccaGGCg                                                                                           <  1:901905‑M2/4‑1 (MQ=255)
     cggaagcctttgttgccgaactctttgaacatattgctgattatagctggccgtggacgtgggtggttttcgactcttaccgccaGGCGGTTa                                                                                       >  2:2220677‑M2/86‑93 (MQ=255)
     cggaagcctttgttgccgaactctttgaacatattgctgattatagctggccgtggacgtgggtggtttccgactcttaccgccaGGCGGTTa                                                                                       >  1:4610779‑M2/86‑93 (MQ=255)
     cggaagcctttgttgccgaactctttgaacatattgctgattatagctggccgtggacgtgggtggtttccgactcttaccgccaGGCGGTTa                                                                                       >  1:2335832‑M2/86‑93 (MQ=255)
     cggaagcctttgttgccgaactctttgaacatattgctgattatagctggccgtggacgtgggtggtttccgactcttaccgccaGGCGGTTa                                                                                       >  2:1505414‑M2/86‑93 (MQ=255)
      ggaagcctttgttgccgaactctttgaacatattgctgattatagctggccgtgcacgtgggtggtttccgactcttaccgccaGGCGGTTaa                                                                                      <  2:951465‑M2/9‑1 (MQ=255)
       gaagcctttgttgccgaactctttgaacatattgctgattatagctggccgtggacgtgggtggtttccgactcttaccgccaGGCGGTTAAt                                                                                     <  1:986232‑M2/10‑1 (MQ=255)
       gaagcctttgttgccgaactctttgaacatattgctgattatagctggccgtggacgtgggtggtttccgactcttaccgccaGGCGGTTAAt                                                                                     <  1:1600756‑M2/10‑1 (MQ=255)
       gaagcctttgttgccgaactctttgaacatattgctgattatagctggccgtggacgtgggtggtttccgactcttaccgccaGGCGGTTAAt                                                                                     >  2:1986811‑M2/84‑93 (MQ=255)
         agcctttgttgccgaactctttgaacatattgctgattatagctggccgtggacgtgggtggtttccgactcttaccgccaGGCGGTTAATGc                                                                                   <  2:2902832‑M2/12‑1 (MQ=255)
           cctttgttgccgaactctttgaacatattgctgattatagctggccgtggacgtgggtggtttccgactcttaccgccaGGCGGTTAATGCCt                                                                                 <  2:1562807‑M2/14‑1 (MQ=255)
            ctttgttgccgaactctttgaacatattgctgattatagctggccgtggacgtgggtggtttccgactcttaccgccaGGCGGTTAATGCCtt                                                                                >  2:1870750‑M2/79‑93 (MQ=255)
            ctttgttgccgaactctttgaacatattgctgattatagctggccgtggacgtgggtggtttccgactcttaccgccaGGCGGTTAATGCCtt                                                                                <  1:848626‑M2/15‑1 (MQ=255)
            ctttgttgccgaactctttgaacatattgctgattatagctggccgtggacgtgggtggtttccgactcttaccgccaGGCGGTTAATGCCtt                                                                                >  1:3018846‑M2/79‑93 (MQ=255)
             tttgttgccgaactctttgaacatattgctgattatagctggccgtggacgtgggtggtttccgactcttaccgccaGGCGGTTAATGCCTTc                                                                               >  2:600954‑M2/78‑93 (MQ=255)
             tttgttgccgaactctttgaacatattgctgattatagctggccgtggacgtgggtggtttccgactcttaccgccaGGCGGTTAATGCCTTc                                                                               <  2:715287‑M2/16‑1 (MQ=255)
              ttgttgccgaactctttgaacatattgctgattatagctggccgtggacgtgggtggtttccgactcttaccgccaGGCGGTTAATGCCTTCt                                                                              <  2:2477052‑M2/17‑1 (MQ=255)
               tgttgccgaactctttgaacatattgctgattatagctggccgtggacgtgggtggtttccgactcttaccgccaGGCGGTTAATGCCTTCta                                                                             <  1:244751‑M2/18‑1 (MQ=255)
                gttgccgaactctttgaacatattgctgattatagctggccgtggacgtgggtggtttccgactcttaccgccaGGCGGTTAATGCCTTCtat                                                                            <  1:484760‑M2/19‑1 (MQ=255)
                   gccgaactctttgaacatattgctgattatagctggccgtggacgtgggtggtttccgactcttaccgccaGGCGGTTAATGCCTTCTATaaa                                                                         >  2:1878459‑M2/72‑93 (MQ=255)
                     cgaactctttgaacatattgctgattatagctggccgtggacgtgggtggtttccgactcttaccgccaGGCGGTTAATGCCTTCTATAAAac                                                                       >  1:1521716‑M2/70‑93 (MQ=255)
                      gatctctttgaacatattgctgattatagctggccgtggacgtgggtggtttccgactcttaccgccaGGCGGTTAATGCCTTCTATAAAacc                                                                      <  1:3851318‑M2/25‑1 (MQ=255)
                      gaactctttgaacatattgctgattatagctggccgtggacgtgggtggtttccgactcttaccgccaGGCGGTTAATGCCTTCTATAAAacc                                                                      >  2:3729307‑M2/69‑93 (MQ=255)
                      gaactctttgaacatattgctgattatagctggccgtggacgtgggtggtttccgactcttaccgccaGGCGGTTAATGCCTTCTATAAAacc                                                                      >  2:1372575‑M2/69‑93 (MQ=255)
                      gaactctttgaacatattgctgattatagctggccgtggacgtgggtggtttccgactcttaccgccaGGCGGTTAATGCCTTCTATAAAacc                                                                      >  2:1430982‑M2/69‑93 (MQ=255)
                        actctttgaacatattgctgattatagctggccgtggacgtgggtggtttccgactcttaccgccaGGCGGTTAATGCCTTCTATAAAaccac                                                                    >  2:2235018‑M2/67‑93 (MQ=255)
                        actctttgaacatattgctgattatagctggccgtggacgtgggtggtttccgactcttaccgccaGGCGGTTAATGCCTTCTATAAAaccac                                                                    >  1:1892642‑M2/67‑93 (MQ=255)
                         ctctttgaacatattgctgattatagctggccgtggacgtgggtggtttccgactcttaccgccaGGCGGTTAATGCCTTCTATAAAaccacc                                                                   >  2:4347004‑M2/66‑93 (MQ=255)
                           ctttgaacatattgctgattatagctggccgtggacgtgggtggtttccgactcttaccgccaGGCGGTTAATGCCTTCTATAAAACCACCtt                                                                 >  1:1274669‑M2/64‑93 (MQ=255)
                           ctttgaacatattgctgattatagctggccgtggacgtgggtggtttccgactcttaccgccaGGCGGTTAATGCCTTCTATAAAACCACCtt                                                                 >  1:1280534‑M2/64‑93 (MQ=255)
                              tgaacatattgctgattatagctggccgtggacgtgggtggtttccgactcttaccgccaGGCGGTTAATGCCTTCTATAAAACCACCTTCaa                                                              >  1:1348385‑M2/61‑93 (MQ=255)
                               gaacatattgctgattatagctggccgtggacgtgggtggtttccgactcttaccgccaGGCGGTTAATGCCTTCTATAAAACCACCTTCAAg                                                             >  1:1174139‑M2/60‑93 (MQ=255)
                                aacatattgctgattatagctggccgtggacgtgggtggtttccgactcttaccgccaGGCGGTTAATGCCTTCTATAAAACCACCTTCAAGa                                                            >  1:2502988‑M2/59‑93 (MQ=255)
                                aacatattgctgattatagctggccgtggacgtgggtggtttccgactcttaccgccaGGCGGTTAATGCCTTCTATAAAACCACCTTCAAGa                                                            >  2:4231972‑M2/59‑93 (MQ=255)
                                 acatattgctgattatagctggccgtggacgtgggtggtttccgactcttaccgccaGGCGGTTAATGCCTTCTATAAAACCACCTTCAAGAc                                                           <  1:1658721‑M2/36‑1 (MQ=255)
                                 acatattgctgattatagctggccgtggacgtgggtggtttccgactcttaccgccaGGCGGTTAATGCCTTCTATAAAACCACCTTCAAGAc                                                           <  1:4021053‑M2/36‑1 (MQ=255)
                                 acatattgctgattatagctggccgtggacgtgggtggtttccgactcttaccgccaGGCGGTTAATGCCTTCTATAAAACCACCTTCAAGAc                                                           <  1:4267225‑M2/36‑1 (MQ=255)
                                   atattgctgattatagctggccgtggacgtgggtggtttccgactcttaccgccaGGCGGTTAATGCCTTCTATAAAACCACCTTCAAGAcgc                                                         >  1:3495880‑M2/56‑92 (MQ=255)
                                    tattgctgattatagctggccgtggacgtgggtggtttccgactcttaccgccaGGCGGTTAATGCCTTCTATAAAACCACCTTCAAGACGGc                                                        >  2:2365526‑M2/55‑93 (MQ=255)
                                    tattgctgattatagctggccgtggacgtgggtggtttccgactcttaccgccaGGCGGTTAATGCCTTCTATAAAACCACCTTCAAGACGGc                                                        >  2:2814446‑M2/55‑93 (MQ=255)
                                    tattgctgattatagctggccgtggacgtgggtggtttccgactcttaccgccaGGCGGTTAATGCCTTCTATAAAACCACCTTCAAGACGGc                                                        >  2:2550662‑M2/55‑93 (MQ=255)
                                      ttgctgattatagctggccgtggacgtgggtggtttccgactcttaccgccaGGCGGTTAATGCCTTCTATAAAACCACCTTCAAGACGGCCa                                                      <  2:3793903‑M2/41‑1 (MQ=255)
                                      ttgctgattatagctggccgtggacgtgggtggtttccgactcttaccgccaGGCGGTTAATGCCTTCTATAAAACCACCTTCAAGACGGCCa                                                      <  2:4296869‑M2/41‑1 (MQ=255)
                                        gcggattatagctggccgcggacgtgggtggtttccgactcctaccgccaGGCTGTTAATGCCTTCTATAAAACCACCTTCAAGACGGCCaat                                                    >  2:1722541‑M2/51‑93 (MQ=255)
                                         ctgattatagctggccgtggacgtgggtggtttccgactcttaccgccaGGCGGTTAATGCCTTCTATAAAACCACCTTCAAGACGGCCaata                                                   >  1:4466338‑M2/50‑93 (MQ=255)
                                          tgattatagctggccgtggacgtgggtggtttccgactcttaccgccaGGCGGTTAATGCCTTCTATAAAACCACCTTCAAGACGGCCaataa                                                  <  2:936763‑M2/45‑1 (MQ=255)
                                          tgattatagctggccgtggacgtgggtggtttccgactcttaccgccaGGCGGTTAATGCCTTCTATAAAACCACCTTCAAGACGGCCaataa                                                  >  1:3351659‑M2/49‑93 (MQ=255)
                                          tgattatagctggccgtggacgtgggtggtttccgactcttaccgccaGGCGGTTAATGCCTTCTATAAAACCACCTTCAAGACGGCCaataa                                                  >  1:3417731‑M2/49‑93 (MQ=255)
                                          tgattatagctggccgtggacgtgggtggtttccgactcttaccgccaGGCGGTTAATGCCTTCTATAAAACCACCTTCAAGACGGCCaataa                                                  >  1:4231408‑M2/49‑93 (MQ=255)
                                           gattatagctggccgtggacgtgggtggtttccgactcttaccgccaGGCGGTTAATGCCTTCTATAAAACTAACTTCAAGAGGGGCaattat                                                 >  2:3716653‑M2/48‑93 (MQ=255)
                                           gattatagctggccgtggacgtgggtggtttccgactcttaccgccaGGCGGTTAATGCCTTCTATAAAACCACCTTCAAGACGGCCaataat                                                 >  1:938741‑M2/48‑93 (MQ=255)
                                            attatagctggccgtggacgtgggtggtttccgactcttaccgccaGGCGGTTAATGCCTTCTATAAAACCACCTTCAAGACGGCCAATAATc                                                >  2:3926656‑M2/47‑93 (MQ=255)
                                             ttatagctggccgtggacgtgggtggtttccgactcttaccgccaGGCGGTTAATGCCTTCTATAAAACCACCTTCAAGACGGCCAATAATcc                                               >  1:2116278‑M2/46‑93 (MQ=255)
                                             ttatagctggccgtggacgtgggtggtttccgactcttaccgccaGGCGGTTAATGCCTTCTATAAAACCACCTTCAAGACGGCCAATAATcc                                               >  1:3258319‑M2/46‑93 (MQ=255)
                                             ttatagctggccgtggacgtgggtggtttccgactcttaccgccaGGCGGCTAATGCCTTCTATAAAACCACCTTCAAGACGGCCAATAATcc                                               >  2:2418483‑M2/46‑93 (MQ=255)
                                               atagctggccgtggacgtgggtggtttccgactcttaccgccaGGCGGTTAATGCCTTCTATAAAACCACCTTCAAGACGGCCAATAATCCCg                                             >  1:4218065‑M2/44‑93 (MQ=255)
                                                tagctggccgtggacgtgggttgtttccgactcttaccgccaGGCGGTTAATGCCTTCTATAAAACCACCTTCAAGACGGCCAATAATCCCGa                                            <  2:1595883‑M2/51‑1 (MQ=255)
                                                tagctggccgtggacgtgggtggtttccgactcttaccgccaGGCGGTTAATGCCTTCTATAAAACCACCTTCAAGACGGCCAATAATCCCGa                                            >  1:2673940‑M2/43‑93 (MQ=255)
                                                tagctggccgtggacgtgggtggtttccgactcttaccgccaGGCGGTTAATGCCTTCTATAAAACCACCTTCAAGACGGCCAATAATCCCGa                                            >  1:2042221‑M2/43‑93 (MQ=255)
                                                 agctggccgtggacgtgggtggtttccgactcttaccgccaGGCGGTTAATGCCTTCTATAAAACCACCTTCAAGACGGCCAATAATCCCGAt                                           >  1:3085421‑M2/42‑93 (MQ=255)
                                                 agctggccgtggacgtgggtggtttccgactcttaccgccaGGCGGTTAATGCCTTCTATAAAACCACCTTCAAGACGGCCAATAATCCCGAt                                           >  1:3578199‑M2/42‑93 (MQ=255)
                                                  gctggccgtggacgtgggtggtttccgactcttaccgccaGGCGGTTAATGCCTTCTATAAAACCACCTTCAAGACGGCCAATAATCCCGATg                                          >  1:636869‑M2/41‑93 (MQ=255)
                                                  gctggccgtggacgtgggtggtttccgactcttaccgccaGGCGGTTAATGCCTTCTATAAAACCACCTTCAAGACGGCCAATAATCCCGATg                                          <  1:52871‑M2/53‑1 (MQ=255)
                                                      gccgtggacgtgggtggtttccgactcttaccgccaGGCGGTTAATGCCTTCTATAAAACCACCTTCAAGACGGCCAATAATCCCGATGAAGa                                      >  2:3385901‑M2/37‑93 (MQ=255)
                                                        cgtggacgtgggtggtttccgactcttaccgccaGGCGGTTAATGCCTTCTATAAAACCACCTTCAAGACGGCCAATAATCCCGATGAAGata                                    <  1:442444‑M2/59‑1 (MQ=255)
                                                        cgtggacgtgggtggtttccgactcttaccgccaGGCGGTTAATGCCTTCTATAAAACCACCTTCAAGACGGCCAATAATCCCGATGAAGata                                    <  2:3326047‑M2/59‑1 (MQ=255)
                                                          tggacgtgggtggtttccgactcttaccgccaGGCGGTTAATGCCTTCTATAAAACCACCTTCAAGACGGCCAATAATCCCGATGAAGATATg                                  >  2:78132‑M2/33‑93 (MQ=255)
                                                           ggacgtgggtggtttccgactcttaccgccaGGCGGTTAATGCCTTCTATAAAACCACCTTCAAGACGGCCAATAATCCCGATGAAGATATGc                                 <  1:677390‑M2/62‑1 (MQ=255)
                                                            gacgtgggtggtttccgactcttaccgccaGGCGGTTAATGCCTTCTATAAAACCACCTTCAAGACGGCCAATAATCCCGATGAAGATATGCa                                >  1:3100994‑M2/31‑93 (MQ=255)
                                                            gacgtgggtggtttccgactcttaccgccaGGCGGTTAATGCCTTCTATAAAACCACCTTCAAGACGGCCAATAATCCCGATGAAGATATGCa                                <  1:2464500‑M2/63‑1 (MQ=255)
                                                              cgtgggtggtttccgactcttaccgccaGGCGGTTAATGCCTTCTATAAAACCACCTTCAAGACGGCCAATAATCCCGATGAAGATATGCaaa                              <  2:4607945‑M2/65‑1 (MQ=255)
                                                               gtgggtggtttccgactcttaccgccaGGCGGTTAATGCCTTCTATAAAACCACCTTCAAGACGGCCAATAATCCCGATGAAGATATGCAAAt                             >  1:1430711‑M2/28‑93 (MQ=255)
                                                                tgggtggtttccgactcttaccgccaGGCGGTTAATGCCTTCTATAAAACCACCTTCAAGACGGCCAATAATCCCGATGAAGATATGCAAATa                            >  1:3864452‑M2/27‑93 (MQ=255)
                                                                tgggtggtttccgactcttaccgccaGGCGGTTAATGCCTTCTATAAAACCACCTTCAAGACGGCCAATAATCCCGATGAAGATATGCAAATa                            >  1:254362‑M2/27‑93 (MQ=255)
                                                                  ggtggtttccgactcttaccgccaGGCGGTTAATGCCTTCTATAAAACCACCTTCAAGACGGCCGATAATCCCGATGAAGATATGCAAATAGa                          <  2:3830295‑M2/69‑1 (MQ=255)
                                                                   gtggtttccgcctcttaccgccaGGCGGTTAATGCCTTCTATAAAACCACCTTCAAGACGGCCAATAATCCCGATGAAGATATGCAAATAGaa                         <  2:499785‑M2/70‑1 (MQ=255)
                                                                    tggtttccgactcttaccgccaGGCGGTTAATGCCTTCTATAAAACCACCTTCAAGACGGCCAATAATCCCGATGAAGATATGCAAATAGAAc                        <  2:468440‑M2/71‑1 (MQ=255)
                                                                    aggtttccgactcttaccgccaGGCGGTTAATGCCTTCTATAAAACCACCTTCAAGACGGCCAATAATCCCGATGAAGATATGCAAATAGAAc                        <  1:3751172‑M2/71‑1 (MQ=255)
                                                                         tccgactcttaccgccaGGCGGTTAATGCCTTCTATAAAACCACCTTCAAGACGGCCAATAATCCCGATGAAGATATGCAAATAGAACGGCaa                   >  2:3914766‑M2/18‑93 (MQ=255)
                                                                            gactcttaccgccaGGCGGTTAATGCCTTCTATAAAACCACCTTCAAGACGGCCAATAATCCCGATGAAGATATGCAAATAGAACGGCAattt                >  2:1484955‑M2/15‑93 (MQ=255)
                                                                              ctcttaccgccaGGCGTTTAATGCCTTCTATAAAACCGCCTTCAAGACGGCCAATAATCCCGATGAAGATATGCAAATAGAACGGCAatttat              <  1:2612423‑M2/81‑1 (MQ=255)
                                                                              ctcttaccgccaGGCGGTTAATGCCTTCTATAAAACCACCTTCAAGACGGCCAATAATCCCGATGAAGATATGCAAATAGAACGGCAatttat              >  1:725474‑M2/13‑93 (MQ=255)
                                                                              ctcttaccgccaGGCGGTTAATGCCTTCTATAAAACCACCTTCAAGACGGCCAATAATCCCGATGAAGATATGCAAATAGAACGGCAatttat              >  1:2425523‑M2/13‑93 (MQ=255)
                                                                              ctcttaccgccaGGCGGTTAATGCCTTCTATAAAACCACCTTCAAGACGGCCAATAATCCCGATGAAGATATGCAAATAGAACGGCAatttat              <  2:3940156‑M2/81‑1 (MQ=255)
                                                                               tcttaccgccaGGCGGTTAATGCCTTCTATAAAACCACCTTCAAGACGGCCAATAATCCCGATGAAGATATGCAAATAGAACGGCAatttatt             <  2:3547047‑M2/82‑1 (MQ=255)
                                                                                cttaccgccaGGCGGTTAATGCCTTCTATAAAACCACCTTCAAGACGGCCAATAATCCCGATGAAGATATGCAAATAGAACGGCAatttattt            >  2:111875‑M2/11‑93 (MQ=255)
                                                                                 ttaccgccaGGCGGTTAATGCCTTCTATAAAACCACCTTCAAGACGGCCAATAATCCCGATGAAGATATGCAAATAGAACGGCAAtttattta           >  2:4564924‑M2/10‑93 (MQ=255)
                                                                                 ttaccgccaGGCGGTTAATGCCTTCTATAAAACCACCTTCAAGACGGCCAATAATCCCGATGAAGATATGCAAATAGAACGGCAAtttattta           <  1:794216‑M2/84‑1 (MQ=255)
                                                                                 ttaccgccaGGCGGTTAATGCCTTCTATAAAACCACCTTCAAGACGGCCAATAATCCCGATGAAGATATGCAAATAGAACGGCAAtttattta           >  1:281413‑M2/10‑93 (MQ=255)
                                                                                  tacggccaGCCGGTTAATGCCTTCTATAAAACCACCTTCAAGACGGCCAATAATCCCGATGAAGATATGCAAATAGAACGGcaatttattttc          <  2:1812776‑M2/85‑3 (MQ=255)
                                                                                   accgccaGGCGGTTAATGCCTTCTATAAAACCACCTTCAAGACGGCCAATAATCCCGATGAAGATATGCAAATAGAACGGCAATTTATTTACg         <  1:754396‑M2/86‑1 (MQ=255)
                                                                                    ccgccaGGCGGTTAATGCCTTCTATAAAACCACCTTCGAGACGGCCAATAATCCCGATGAAGATATGCAAATAGAACGGCAATTTATTTACGa        <  2:4061634‑M2/87‑1 (MQ=255)
                                                                                    ccgccaGGCGGTTAATGCCTTCTATAAAACCACCTTCAAGACGGCCAATAATCCCGATGAAGATATGCAAATAGAACGGCAATTTATTTACGa        >  2:3436698‑M2/7‑93 (MQ=255)
                                                                                      gccaGGCGGTTAATGCCTTCTATAAAACCACCTTCAAGACGGCCAATAATCCCGATGAAGATATGCAAATAGAACGGCAATTTATTTACGACa      >  2:369868‑M2/5‑93 (MQ=255)
                                                                                       ccaGGCGGTTAATGCCTTCTATAAAACCACCTTCAAGACGGCCAATAATCCCGATGAAGATATGCAAATAGAACGGCAATTTATTTACGACaa     <  1:1482139‑M2/90‑1 (MQ=255)
                                                                                         aGGCGGTTAATGCCTTCTATAAAACCACCTTCAAGACGGCCAATAATCCCGATGAAGATATGCAAATAGAACGGCAATTTATTTACGACAATc   >  1:4567635‑M2/2‑93 (MQ=255)
                                                                                         aGGCGGTTAATGCCTTCTATAAAACCACCTTCAAGACGGCCAATAATCCCGATGAAGATATGCAAATAGAACGGCAATTTATTTACGACAATc   <  1:1082871‑M2/92‑1 (MQ=255)
                                                                                          ggCGGTTAATGCCTTCTATAAAACCACCTTCAAGACGGCCAATAATCCCGATGAAGATATGCAAATAGAACGGCAATTTATTTACGACAATcc  <  1:1026701/93‑1 (MQ=255)
                                                                                          |                                                                                            
GCCGGAAGCCTTTGTTGCCGAACTCTTTGAACATATTGCTGATTATAGCTGGCCGTGGACGTGGGTGGTTTCCGACTCTTACCGCCACCAGGCGGTTAATGCCTTCTATAAAACCACCTTCAAGACGGCCAATAATCCCGATGAAGATATGCAAATAGAACGGCAATTTATTTACGACAATCC  >  NC_000913/3156170‑3156352

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 19 ≤ ATCG/ATCG < 28 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: