| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | 3088416 = | 207 (1.140) | 3 (0.020) | 3/174 | 14.8 | 1.6% | coding (51/708 nt) | endA | DNA‑specific endonuclease I |
| ? | NC_000913 | 3088433 = | 184 (1.070) | coding (68/708 nt) | endA | DNA‑specific endonuclease I | |||||
| Rejected: Coverage evenness skew score above cutoff. | |||||||||||
| Rejected: Frequency below/above cutoff threshold. | |||||||||||
TCCGCAATAAAACGTACCGGGCGCGTCAGCGTGGACTTTTACCGCCGCGGCTTTCGCCTGAGAAAAACTATTGATACCTTCGGCCAACGCCGGGCCG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_000913/3088512‑3088416‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ggccgAAGGTATCAATAGTTTTTCTCAGGCGAAAGCCGCGGCGGTAAAAGTCCACGCTGACGCGCCCGGTACGTTTTATTGCGGATGTAAAATTAAC > NC_000913/3088433‑3088524 TCCGCAATAAAACTTACCGGGCGCGTCAGCGTGGACTTTTACCGCCGCGGCTTTCGCCTGAGAAAAACTATTGATACCTTCGGCCAACGCCGG > 2:2944952/1‑93TCCGCAATAAAACGTACCGGGCGCGTCAGCGTGGACTTTTACCGCCGCGGCTTTCGCCTGAGAAAAACTATTGATACCTTCGGCCAACGCCGG > 1:2995979/1‑93TCCGCAATAAAACGTACCGGGCGCGTCAGCGTGGACTTTTACCGCCGCGGCTTTCGCCTGAGAAAAACTATTGATACCTTCGGCCAACGCCGG > 1:3223031/1‑93TCCGCAATAAAACGTACCGGGCGCGTCAGCGTGGACTTTTACCGCCGCGGCTTTCGCCTGAGAAAAACTATTGATACCTTCGGCCAACGCCGG > 1:635103/1‑93 CCGCAATAAAACGTACCGGGCGCGTCAGCGTGGACTTTTACCGCCGCGGCTTTCGCCTGAGAAAAACTATTGATACCTTCGGCCAACGCCGGG > 1:2360323/1‑93 gaAATAAAACGTACCGGGCGCGTCAGCGTGGACTTTTACCGCCGCGGCTTTCGCCTGAGAAAAACTATTGATACCTTCGGCCAACGCCGGGCC < 2:3552532/91‑1 GCAATAAAACGTACCGGGCGCGTCAGCGTGGACTTTTACCGCCGCGGCTTTCGCCTGAGAAAAACTATTGATACCTTCGGCCAACGCCGGGCg > 1:3294194/1‑92 GCAATAAAACGTACCGGGCGCGTCAGCGTGGACTTTTACCGCCGCGGCTTTCGCCTGAGAAAAACTATTGATACCTTCGGCCAACGCCGGGCC > 1:3294193/1‑93 CTTTCGCCTGAGAAAAACTATTGATACCTTCGGCCAACGCCGGGCCGAAGGTATCAATAGT < 2:774696/61‑1 CTTTCGCCTGAGAAAAACTATTGATACCTTCGGCCAACGCCGGGCCGAAGGTATCAATAGT > 1:774696/1‑61 gtGGGCAGAAGGTATCAATAGTTTTTCTCAGGCGAAAGCCGCGGCGGTAAAAGTCCACGCTGACGCGCCCGGTACGTTTTATTGCGGATGTAA < 2:1149616/91‑1 GGCCGAAGGTATCAATAGTTTTTCTCAGGCGAAAGCCGCGGCGGTAAAAGTCCACGCTGACGCGCCCGGTACGTTTTATTGCGGATGTAAAAT < 1:1341958/93‑1 GGCCGAAGGTATCAATAGTTTTTCTCAGGCGAAAACCGCGGCGGTAAAAGTCCACGCTGACGCGCCCGGTACGTTTTATTGCGGATGTAAAAT < 1:3182705/93‑1 CCGAAGGTATCAATAGTTTTTCTCAGGCGAAAGCCGCGGCGGTAAAAGTCCACGCTGACGCGCCCGGTACGTTTTATTGCGGATGTAAAATTA < 1:3244161/93‑1 CCGAAGGTATCAATAGTTTTTCTCAGGCGAAAGCCGCGGCGGTAAAAGTCCACGCTGACGCGCCCGGTACGTTTTATTGCGGATGTAAAATTA > 1:872544/1‑93 CCGAAGGTATCAATAGTTTTTCTCAGGCGAAAGCCGCGGCGGTAAAAGTCCACGCTGACGCGCCCGGTACGTTTTATTGCGGATGTAAAATTA < 2:2630067/93‑1 CCGAAGGTATCAATAGTTTTTCTCAGGCGAAAGCCCCGGCGGTAAAAGTCCACGCTGACGCGCCCGGTACGTTTTATTGCGGTTGTAAAATTA > 2:4016403/1‑93 CGAAGGTATCAATAGTTTTTCTCAGGCGAAAGCCGCGGCGGTAAAAGTCCACGCTGACGCGCCCGGTACGTTTTATTGCGGATGTAAAATTAA < 1:485846/93‑1 CGAAGGTATCAATAGTTTTTCTCAGGCGAAAGCCGCGGCGGTAAAAGTCCACGCTGACGCGCCCGGTACGTTTTATTGCGGATGTAAAATTAA > 2:1639401/1‑93 CGAAGGTATCAATAGTTTTTCTCAGGCGAAAGCCGCGGCGGTAAAAGTCCACGCTGACGCGCCCGGTACGTTTTATTGCGGATGTAAAATTAA < 2:2843456/93‑1 CGAAGGTATCAATAGTTTTTCTCAGGCGAAAGCCGCGGCGGTAAAAGTCCACGCTGACGCGCCCGGTACGTTTTATTGCGGATGTAAAATTAA > 1:3049297/1‑93 GAAGGTATCAATAGTTTTTCTCAGGCGAAAGCCGCGGCGGTAAAAGTCCACGCTGACGCGCCCGGTACGTTTTATTGCGGATGTAAAATTAAC < 2:2342659/93‑1 GAAGGTATCAATAGTTTTTCTCAGGCGAAAGCCGCGGCGGTAAAAGTCCACGCTGACGCGCCCGGTACGTTTTATTGCGGATGTAAAATTAAC > 2:2751818/1‑93 GAAGGTATCAATAGTTTTTCTCAGGCGAAAGCCGCGGCGGTAAAAGTCCACGCTGACGCGCCCGGTACGTTTTATTGCGGATGTAAAATTAAC > 1:2811645/1‑93 GAAGGTATCAATAGTTTTTCTCAGGCGAAAGCCGCGGCGGTAAAAGTCCACGCTGACGCGCCCGGTACGTTTTATTGCGGATGTAAAATTAAC < 2:4743067/93‑1 TCCGCAATAAAACGTACCGGGCGCGTCAGCGTGGACTTTTACCGCCGCGGCTTTCGCCTGAGAAAAACTATTGATACCTTCGGCCAACGCCGGGCCG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_000913/3088512‑3088416‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ggccgAAGGTATCAATAGTTTTTCTCAGGCGAAAGCCGCGGCGGTAAAAGTCCACGCTGACGCGCCCGGTACGTTTTATTGCGGATGTAAAATTAAC > NC_000913/3088433‑3088524 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 18 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |