New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913 3088416 =207 (1.140)3 (0.020) 3/174 14.8 1.6% coding (51/708 nt) endA DNA‑specific endonuclease I
?NC_000913 3088433 = 184 (1.070)coding (68/708 nt) endA DNA‑specific endonuclease I
Rejected: Coverage evenness skew score above cutoff.
Rejected: Frequency below/above cutoff threshold.

Only 100 of 201 total aligned reads displayed.

GGCTCGTTTTAACACGGAGTAAGTGATGTACCGTTATTTGTCTATTGCTGCGGTGGTACTGAGCGCAGCATTTTCCGGCCCGGCGTTGGCCGAAGGTATCAATAGTTTTTCTCAGGCGAAAGCCGCGGCGGTAAAAGTCCACGCTGACGCGCCCGGTACGTTTTATTGCGGATGTAAAATTAACT  >  NC_000913/3088341‑3088525
                                                                                            |                                                                                            
 gCTCGTTTTAACACGGAGTAAGTGATGTACCGTTATTTGTCTATTGCTGCGGTGGTACTGAGCGCAGCATTTTCCGGCCCGGCGTTGGCCGaa                                                                                             <  2:1027075/93‑1 (MQ=255)
 gCTCGTTTTAACACGGAGTAAGTGATGTACCGTTATTTGTCTATTGCTGCGGTGGTACTGAGCGCAGCATTTTCCGGCCCGGCGTTGGCCGaa                                                                                             >  2:1165633/1‑93 (MQ=255)
 gCTCGTTTTAACACGGAGTAAGTGATGTACCGTTATTTGTCTATTGCTGCGGTGGTACTGAGCGCAGCATTTTCCGGCCCGGCGTTGGCCGaa                                                                                             >  1:4719423/1‑93 (MQ=255)
  cTCGTTTTAACACGGAGTAAGTGATGTACCGTTATTTGTCTATTGCTGCGGTGGTACTGAGCGCAGCATTTTCCGGCCCGGCGTTGGCCGTAg                                                                                            >  2:3635481/1‑93 (MQ=255)
  cTCGTTTTAACACGGAGTAAGTGATGTACCGTTATTTGTCTATTGCTGCGGTGGTACTGAGCGCAGCATTTTCCGGCCCGGCGTTGGCCGAAg                                                                                            <  2:1972753/93‑1 (MQ=255)
  cTCGTTTTAACACGGAGTAAGTGATGTACCGTTATTTGTCTATTGCTGCGGTGGTACTGAGCGCAGCATTTTCCGGCCCGGCGTTGGCCGAAg                                                                                            <  1:1651651/93‑1 (MQ=255)
  cTCGTTTTAACACGGAGTAAGTGATGTACCGTTATTTGTCTATTGCTGCGGTGGTACTGAGCGCAGCATTTTCCGGCCCGGCGTTGGCCGAAg                                                                                            <  2:2192169/93‑1 (MQ=255)
   tCGTTTTAACACGGAGTAAGTGATGTACCGTTATTTGTCTATTGCTGCGGTGGTACTGAGCGCAGCATTTTCCGGCCCGGCGTTGGCCGAAgg                                                                                           >  2:1738493/1‑93 (MQ=255)
   tCGTTTTAACACGGAGTAAGTGATGTACCGTTATTTGTCTATTGCTGCGGTGGTACTGAGCGCAGCATTTTCCGGCCCGGCGTTGGCCGAAgg                                                                                           <  1:3576100/93‑1 (MQ=255)
     gTTTTAACACGGAGTAAGTGATGTACCGTTATTTGTCTATTGCTGCGGTGGTACTGAGCGCAGCATTTTCCGGCCCGGCGTTGGCCGAAGGTa                                                                                         <  1:3352695/93‑1 (MQ=255)
     gTTTTAACACGGAGTAAGTGATGTACCGTTATTTGTCTATTGCTGCGGTGGTACTGAGCGCAGCATTTTCCGGCCCGGCGTTGGCCGAAGGTa                                                                                         >  2:550946/1‑93 (MQ=255)
      ttttAACACGGAGTAAGTGATGTACCGTTATTTGTCTATTGCTGCGGTGGTACTGAGCGCAGCATTTTCCGGCCCGGCGTTGGCCGAAGGTAt                                                                                        >  2:4621754/1‑93 (MQ=255)
      ttttAACACGGAGTAAGTGATGTACCGTTATTTGTCTATTGCTGCGGTGGTACTGAGCGCAGCATTTTCCGGCCCGGCGTTGGCCGAAGGTAt                                                                                        >  2:4668015/1‑93 (MQ=255)
       tttACCACGGAGTAAGTGATATACCGTTATTTGACTATTGCTGCGGTGTTACTGAGCGCAGCATTTTCCGGCCCGGCGTTGGCCGAAGGTATc                                                                                       <  2:2415735/93‑1 (MQ=255)
       tttAACACGGAGTAAGTGATGTACCGTTATTTGTCTATTGCTGCGGTGGTACTGAGCGCAGCATTTTCCGGCCCGGCGTTGGCCGAAGGTATc                                                                                       <  2:4616669/93‑1 (MQ=255)
          aaCACGGAGTAAGTGATGTACCGTTATTTGTCTATTGCTGCGGTGGTACTGAGCGCAGCATTTTCCGGCCCGGCGTTGGCCGAAGGTATCAAt                                                                                    <  1:351663/93‑1 (MQ=255)
           acacGGAGTAAGTGATGTACCGTTATTTGTCTATTGCTGCGGTGGTACTGAGCGCAGCATTTTCCGGCCCGGCGTTGGCCGAAGGTATCAATa                                                                                   >  1:4449734/1‑93 (MQ=255)
           acacGGAGTAAGTGATGTACCGTTATTTGTCTATTGCTGCGGTGGTACTGAGCGCAGCATTTTCCGGCCCGGCGTTGGCCGAAGGTATCAATa                                                                                   <  2:354810/93‑1 (MQ=255)
           acacGGAGTAAGTGATGTACCGTTATTTGTCTATTGCTGCGGTGGTACTGAGCGCAGCATTTTCCGGCCCGGCGTTGGCCGAAGGTATCAATa                                                                                   <  2:3434031/93‑1 (MQ=255)
           acacGGAGTAAGTGATGTACCGTTATTTGTCTATTGCTGCGGTGGTACTGAGCGCAGCATTTTCCGGCCCGGCGTTGGCCGAAGGTATCAATa                                                                                   <  2:3418410/93‑1 (MQ=255)
              cGGAGTAAGTGATGTACCGTTATTTGTCTATTGCTGCGGTGGTACTGAGCGCAGCATTTTCCGGCCCGGCGTTGGCCGAAGGTATCAATAGtt                                                                                >  2:4171342/1‑93 (MQ=255)
               ggAGTAAGTGATGTACCGTTATTTGTCTATTGCTGCGGTGGTACTGAGCGCAGCATTTTCCGGCCCGGCGTTGGCCGAAGGTATCAATAGttt                                                                               <  2:3954084/93‑1 (MQ=255)
               ggAGTAAGTGATGTACCGTTATTTGTCTATTGCTGCGGTGGTACTGAGCGCAGCATTTTCCGGCCCGGCGTTGGCCGAAGGTATCAATAGttt                                                                               <  1:3112610/93‑1 (MQ=255)
                gAGTAAGTGATGTACCGTTATTTGTCTATTGCTGCGGTGGTACTGAGCGCAGCATTTTCCGGCCCGGCGTTGGCCGAAGGTATCAATAGtttt                                                                              <  2:3126889/93‑1 (MQ=255)
                gAGTAAGTGATGTACCGTTATTTGTCTATTGCTGCGGTGGTACTGAGCGCAGCATTTTCCGGCCCGGCGTTGGCCGAAGGTATCAATAGtttt                                                                              <  1:8001/93‑1 (MQ=255)
                  gTAAGTGATGTACCGTTATTTGTCTATTGCTGCGGTGGTACTGAGCGCAGCATTTTCCGGCCCGGCGTTGGCCGAAGGTATCAATAGTTTTtc                                                                            >  2:3998833/1‑93 (MQ=255)
                   tAAGTGATGTACCGTTATTTGTCTATTGCTGCGGTGGTACTGAGCGCAGCATTTTCCGGCCCGGCGTTGGCCGAAGGTATCAATAGTTTTtct                                                                           >  1:2677466/1‑93 (MQ=255)
                    aaGTGATGTACCGTTATTTGTCTATTGCTGCGGTGGTACTGAGCGCAGCATTTTCCGGCCCGGCGTTGGCCGAAGGTATCAATAGTTTTtctc                                                                          <  1:1560617/93‑1 (MQ=255)
                     aGTGATGTACCGTTATTTGTCTATTGCTGCGGTGGTACTGAGCGCAGCATTTTCCGGCCCGGCGTTGGCCGAAGGTATCAATAGTTTTTCTCa                                                                         <  2:286249/93‑1 (MQ=255)
                      gTGATGTACCGTTATTTGTCTATTGCTGCGGTGGTACTGAGCGCAGCATTTTCCGGCCCGGCGTTGGCCGAAGGTATCGATAGTTTTTCTCAg                                                                        >  1:1331824/1‑93 (MQ=255)
                      gTGATGTACCGTTATTTGTCTATTGCTGCGGTGGTACTGAGCGCAGCATTTTCCGGCCCGGCGTTGGCCGAAGGTATCAATAGTTTTTCTCAg                                                                        <  1:2232028/93‑1 (MQ=255)
                      gTGATGTACCGTTATTTGTCTATTGCTGCGGTGGTACTGAGCGCAGCATTTTCCGGCCCGGCGTTGGCCGAAGGTATCAATAGTTTTTCTCAg                                                                        <  2:2836972/93‑1 (MQ=255)
                        gATGTACCGTTATTTGTCTATTGCTGCGGTGGTACTGAGCGCAGCATTTTCCGGCCCGGCGTTGGCCGAAGGTATCAATAGTTTTTCTCAGGc                                                                      <  1:145300/93‑1 (MQ=255)
                        gATGTACCGTTATTTGTCTATTGCTGCGGTGGTACTGAGCGCAGCATTTTCCGGCCCGGCGTTGGCCGAAGGTATCAATAGTTTTTCTCAGGc                                                                      <  1:145303/93‑1 (MQ=255)
                        gATGTACCGTTATTTGTCTATTGCTGCGGTGGTACGGAGCGCAGCATTTTCCGGCCCGGCGTTGGCCGAAGGTATCAATAGTTTTTCTCAGGc                                                                      <  2:2124335/93‑1 (MQ=255)
                         ttGTACCGTTATTTGTCTATTGCTGCGGTGGTACTGAGCGCAGCATTTTCCGGCCCGGCGTTGGCCGAAGGTATCAATAGTTTTTCTCAGGCg                                                                     <  1:1015242/92‑1 (MQ=255)
                         aTGTACCGTTATTTGTCTATTGCTGCGGTGGTACTGAGCGCAGCATTTTCCGGCCCGGCGTTGGCCGAAGGTATCAATAGTTTTTCTCAGGCg                                                                     >  2:2800014/1‑93 (MQ=255)
                          tGTACCGTTATTTGTCTATTGCTGCGGTGGTACTGAGCGCAGCATTTTCCGGCCCGGCGTTGGCCGAAGGTATCAATAGTTTTTCTCAGGCGa                                                                    >  1:2066634/1‑93 (MQ=255)
                             tccGTTATTTGTCTATTGCTGCGGTGGTACTGAGCGCAGCATTTTCCGGCCCGGCGTTGGCCGAAGGTATCAATAGTTTTTCTCAGGCGAAAg                                                                 <  2:1398854/92‑1 (MQ=255)
                              ccGTTATTTGTCTATTGCTGCGGTGGTACTGAGCGCAGCATTTTCCGGCCCGGCGTTGGCCGAAGGTATCAATAGTTTTTCTCAGGCGAAAGc                                                                >  1:1211608/1‑93 (MQ=255)
                               cGTTATTTGTCTATTGCTGCGGTGGTACTGAGCGCAGCATTTTCCGGCCCGGCGTTGGCCGAAGGTATCATTAGTTTTTCTCAGGCGAAAGcc                                                               <  1:3287159/93‑1 (MQ=255)
                               cGTTATTTGTCTATTGCTGCGGTGGTACTGAGCGCAGCATTTTCCGGCCCGGCGTTGGCCGAAGGTATCAATAGTTTTTCTCAGGCGAAAGcc                                                               <  1:4167696/93‑1 (MQ=255)
                               cGTTATTTGTCTATTGCTGCGGTGGTACTGAGCGCAGCATTTTCCGGCCCGGCGTTGGCCGAAGGTATCAATAGTTTTTCTCAGGCGAAAGcc                                                               >  1:3917026/1‑93 (MQ=255)
                               cGTTATTTGTCTATTGCTGCGGTGGTACTGAGCGCAGCATTTTCCGGCCCGGCGTTGGCCGAAGGTATCAATAGTTTTTCTCAGGCGAAAGcc                                                               >  2:3250377/1‑93 (MQ=255)
                                gTTATTTGTCTATTGCTGCGGTGGTACTGAGCGCAGCATTTTCCGGCCCGGCGTTGGCCGAAGGTATCAATAGTTTTTCTCAGGCGAAAGCcg                                                              <  2:2521511/93‑1 (MQ=255)
                                  tATTTGTCTATTGCTGCGGTGGTACTGAGCGCAGCATTTTCCGGCCCGGCGTTGGCCGAAGGTATCAATAGTTTTTCTCAGGCGAAAGCcgcg                                                            >  1:4563412/1‑93 (MQ=255)
                                   aTTTGTCTATTGCTGCGGTGGTACTGAGCGCAGCATTTTCCGGCCCGGCGTTGGCCGAAGGTATCAATAGTTTTTCTCAGGCGAAAGCCgcgg                                                           >  2:3686779/1‑93 (MQ=255)
                                    tttGTCTATTGCTGCGGTGGTACTGAGCGCAGCATTTTCCGGCCCGGCGTTGGCCGAAGGTATCAATAGTTTTTCTCAGGCGAAAGCCgcggc                                                          >  2:1219831/1‑93 (MQ=255)
                                      tGTCTATTGCTGCGGTGGTACTGAGCGCAGCATTTTCCGGCCCGGCGTTGGCCGAAGGTATCAATAGTTTTTCTCAGGCGAAAGCCGcggcgg                                                        <  1:664263/93‑1 (MQ=255)
                                      tGTCTATTGCTGCGGTGGTACTGAGCGCAGCATTTTCCGGCCCGGCGTTGGCCGAAGGTATCAATAGTTTTTCTCAGGCGAAAGCCGcggcgg                                                        >  2:209465/1‑93 (MQ=255)
                                         cTATTGCTGCGGTGGTACTGAGCGCAGCATTTTCCGGCCCGGCGTTGGCCGAAGGTATCAATAGTTTTTCTCAGGCGAAAGCCGCGGCGGTaa                                                     >  1:1938542/1‑93 (MQ=255)
                                          tATTGCTGCGGTGGTACTGAGCGCAGCATTTTCCGGCCCGGCGTTGGCCGAAGGTATCAATAGTTTTTCTCAGGCGAAAGCCGCGGCGGTaaa                                                    <  1:4352418/93‑1 (MQ=255)
                                          tATTGCTGCGGTGGTACTGAGCGCAGCATTTTCCGGCCCGGCGTTGGCCGAAGGTATCAATAGTTTTTCTCAGGCGAAAGCCGCGGCGGTaaa                                                    >  2:1798683/1‑93 (MQ=255)
                                           aTTGCTGCGGTGGTACTGAGCGCAGCATTTTCCGGCCCGGCGTTGGCCGAAGGTATCAATAGTTTTTCTCAGGCGAAAGCCGCGGCGGTaaaa                                                   >  2:2441355/1‑93 (MQ=255)
                                           aTTGCTGCGGTGGTACTGAGCGCAGCATTTTCCGGCCCGGCGTTGGCCGAAGGTATCAATAGTTTTTCTCAGGCGAAAGCCGCGGCGGTaaaa                                                   >  2:3979468/1‑93 (MQ=255)
                                           aTTGCTGCGGTGGTACTGAGCGCAGCATTTTCCGGCCCGGCGTTGGCCGAAGGCATCAATAGTTTTTCTCAGGCGAAAGCCGCGGCGGTaaaa                                                   >  2:4287678/1‑93 (MQ=255)
                                            ttGCTGCGGTGGTACTGAGCGCAGCATTTTCCGGCCCGGCGTTGGCCGAAGGTATCAATAGTTTTTCTCAGGCGAAAGCCGCGGCGGTAAAAg                                                  <  2:543272/93‑1 (MQ=255)
                                             tgctgcGGTGGTACTGAGCGCAGCATTTTCCGGCCCGGCGTTGGCCGAAGGTATCAATAGTTTTTCTCAGGCGAAAGCCGCGGCGGTAAAAGt                                                 <  2:615262/93‑1 (MQ=255)
                                               ctgcGGTGGTACTGAGCGCAGCATTTTCCGGCCCGGCGTTGGCCGAAGGTATCAATAGTTTTTCTCAGGCGAAAGCCGCGGCGGTAAAAGTcc                                               >  2:1551459/1‑93 (MQ=255)
                                                tgcGGTGGTACTGAGCGCAGCATTTTCCGGCCCGGCGTTGGCCGAAGGTATCAATAGTTTTTCTCAGGCGAAAGCCGCGGGGGTAAAAGTccc                                              >  2:3796229/1‑92 (MQ=255)
                                                 gcGGTGGTACTGAGCGCAGCATTTTCCGGCCCGGCGTTGGCCGAAGGTATCAATAGTTTTTCTCAGGCGAAAGCCGCGGCGGTAAAAGTCCAc                                             >  1:1965854/1‑93 (MQ=255)
                                                   ggtggtACTGAGCGCAGCATTTTCCGGCCCGGCGTTGGCCGGAGGTATCAATAGTTTTTCTCAGGCGAAAGCCGCGGCGGTAAAAGTCCACGc                                           >  2:2817763/1‑93 (MQ=255)
                                                    gtggtACTGAGCGCAGCATTTTCCGGCCCGGCGTTGGCCGAAGGTATCAATAGTTTTTCTCAGGCGAAAGCCGCGGCGGTAAAAGTCCACGCt                                          <  1:4134862/93‑1 (MQ=255)
                                                         aCTGAGCGCAGCATTTTCCGGCCGGGCGTTGGCCGAAGGTATCAATAGTTTTTCTCAGGCGAAAGCCGCGGCGGTAAAAGTCCACGCTGAcgc                                     <  1:2976044/93‑1 (MQ=255)
                                                         aCTGAGCGCAGCATTTTCCGGCCCGGCGTTGGCCGAAGGTATCAATAGTTTTTCTCAGGCGAAAGCCGCGGCGGTAAAAGTCCACGCTGAcgc                                     >  1:2843218/1‑93 (MQ=255)
                                                           tGAGCGCAGCATTTTCCGGCCCGGCGTTGGCCGAAGGTATCAATAGTTTTTCTCAGGCGAAAGCCGCGGCGGTAAAAGTGCACGCTGACgcgc                                   >  2:1872398/1‑93 (MQ=255)
                                                           tGAGCGCAGCATTTTCCGGCCCGGCGTTGGCCGAAGGTATCAATAGTTTTTCTCAGGCGAAAGCCGCGGCGGTAAAAGTCCACGCTGACgcgc                                   >  2:382909/1‑93 (MQ=255)
                                                            gAGCGCAGCATTTTCCGGCCCGGCGTTGGCCGAAGGTATCAATAGTTTTTCTCAGGCGAAAGCCGCGGCGGTAAAAGTCCACGCTGACGCGcc                                  >  1:3091540/1‑93 (MQ=255)
                                                            gAGCGCAGCATTTTCCGGCCCGGCGTTGGCCGAAGGGATCAATAGTTTTTCTCATGCGAAAGCCGCGGCGGTAAAAGTCCACGCTGACGCGcc                                  >  1:3371814/1‑93 (MQ=255)
                                                             aGCGCAGCTTTTTCCGGCCCGGCGTGGGCCAAAGTTATAAATATTTTTTCTCAGGCAAAAGCCGCGGCGGTAAAAGTCCACGCTGACGCGccc                                 <  2:2711437/93‑1 (MQ=255)
                                                             aGCGCAGCATTTTCCGGCCCGGCGTTGGCCGAAGGTATCAATAGTTTTTCTCAGGCGAAAGCCGCGGCGGTAAAAGTCCACGCTGACGCGccc                                 <  2:3083675/93‑1 (MQ=255)
                                                             aGCGCAGCATTTTCCGGCCCGGCGTTGGCCGAAGGTATCAATAGTTTTTCTCAGGCGAAAGCCGCGGCGGTAAAAGTCCACGCTGACGCGccc                                 >  2:3315133/1‑93 (MQ=255)
                                                              gcgcAGCATTTTCGGGCCGGGCGTGGGCCGAAGGTATCAATATTTTTTCTCGGGCAAAAGCCGCGGCGGTAAAAGTCCACGCTGACGCGCCCg                                <  1:1874322/93‑1 (MQ=255)
                                                                gcagcaTTTTCCGGCCCGGCGTTGGCCGAAGGTATCAATAGTTTTTCTCAGGCGAAAGCCGCGGCGGTAAAAGTCCACGCTGACGCGCCCgga                              >  2:1596695/1‑92 (MQ=255)
                                                                gcagcaTTTTCCGGCCCGGCGTTGGCCGAAGGTATCAATAGTTTTTCTCAGGCGAAAGCCGCGGCGGTAAAAGTCCACGCTGACGCGCCCGGt                              >  2:3471803/1‑93 (MQ=255)
                                                                 catcaTTTTCCGGCCCGGCGTTGGCCGAAGGGATCAATAGTTTTTCTCAGGCGAAAGCCGCGGCGGTAAAAGTCCACGCTGACGCGCCCGGTa                             >  2:3539970/4‑93 (MQ=255)
                                                                  agcaTTTTCCGGCCCGGCGTTGGCCGAAGGTATCAATAGTTTTTCTCAGGCGAAAGCCGCGGCGGTAAAAGTCCACGCTGACGCGCCCGGTAc                            <  1:2193518/93‑1 (MQ=255)
                                                                  agcaTTTTCCGGCCCGGCGTTGGCCGAAGGTATCAATAGTTTTTCTCAGGCGAAAGCCGCGGCGGTAAAAGTCCACGCTGACGCGCCCGGTAc                            >  1:1977371/1‑93 (MQ=255)
                                                                   gcaTTTTCCGGCCCGGCGTTGGCCGAAGGTATCAATAGTTTTTCTCAGGCGAAAGCCGCGGCGGTAAAAGTCCACGCTGACGCGCCCGGTACg                           >  1:4254348/1‑93 (MQ=255)
                                                                   gcaTTTTCCGGCCCGGCGTTGGCCGAAGGTATCAATAGTTTTTCTCAGGCGAAAGCCGCGGCGGTAAAAGTCCACGCTGACGCGCCCGGTACg                           >  1:4693454/1‑93 (MQ=255)
                                                                      ttttCCGGCCCGGCGTTGGCCGAAGGTATCAATAGTTTTTCTGAGGCGAAAGCCGCGGCGGTAAAAGTCCACGCTGACGCGCCCGGTACGttt                        <  2:2993370/93‑1 (MQ=255)
                                                                       tttCGGGCCCGGCGTTGGCCGAAGGTATAAATAGTTTTTCTCAGGCAAAAGCCGCGGCGGTAAAAGTCCACGCTGACGCGCCCGGTACGtttt                       <  2:4349929/93‑1 (MQ=255)
                                                                       tttCCGGGCCGGCGTTGGCCGAAGGTATCAATAGTTTTTCTCAGGCGAAAGCCGCGGCGGTAAAAGTCCACGCTGACGCGCCCGGTACGtttt                       <  1:2887290/93‑1 (MQ=255)
                                                                        ttCCGGCCCGGCGTTGGCCGAAGGTATCAATAGTTTTTCTCAGGCGAAAGCCGCGGCGGTAAAAGTCCACGCTGACGCGCCCGGTACGTTTTa                      <  1:1095336/93‑1 (MQ=255)
                                                                         tCCGGCCCGGCGTTGTCCGAAGGTATCAATAGTTTTTCTCAGGCGAAAGCCGCGGCGGTAAAAGTCCACGCTGACGCGCCCGGTACGTTTTAt                     <  2:2960570/93‑1 (MQ=255)
                                                                            cgcccggcGTTGGCCGAAGGTATCAATAGTTTTTCTCAGGCGAAAGCCGCGGCGGTAAAAGTCCACGCTGACGCGCCCGGTACGTTTTATTGc                  <  1:3294194/92‑1 (MQ=255)
                                                                              cccggcGTTGGCCGAAGGTATCAATAGTTTTTCTCAGGCGAAAGCCGCGGCGGTAAAAGTCCACGCTGACGCGCCCGGTACGTTTTATTGCgg                <  1:2360323/93‑1 (MQ=255)
                                                                               ccggcGTTGGCCGAAGGTATCAATAGTTTTTCTCAGGCGAAAGCCGCGGCGGTAAAAGTCCACGCTGACGCGCCCGGTACGTTTTATTGCGGa               <  1:635103/93‑1 (MQ=255)
                                                                               ccggcGTTGGCCGAAGGTATCAATAGTTTTTCTCAGGCGAAAGCCGCGGCGGTAAAAGTCCACGCTGACGCGCCCGGTACGTTTTATTGCGGa               <  1:3223031/93‑1 (MQ=255)
                                                                                cggcGTTGGCCGAAGGTATCAATAGTTTTTCTCAGGCGAAAGCCGCGGCGGTAAAAGTCCACGCTGACGCGCCCGGTACGTTTTATTGCGGAt              <  1:3014105/93‑1 (MQ=255)
                                                                                 ggcGTTGGCCGAAGGTATCAATAGTTTTTCTCAGGCGAAAGCCGCGGCGGTAAAAGTCCACGCTGACGCGCCCGGTACGTTTTATTGCGGATg             >  2:1230323/1‑93 (MQ=255)
                                                                                  gcGTTGGCCGAAGGTATCAATAGTTTTTCTCAGGCGAAAGCCGCGGCGGTAAAAGTCCACGCTGACGCGCCCGGTACGTTTTATTGCGGATGt            >  2:743234/1‑93 (MQ=255)
                                                                                     ttGGCCGAAGGTATCAATAGTTTTTCTCAGGCGAAAGCCGCGGCGGTAAAAGTCCACGCTGACGCGCCCGGTACGTTTTATTGCGGATGTaaa         >  1:286420/1‑93 (MQ=255)
                                                                                         ccGAAGGTATCAATAGTTTTTCTCAGGCGAAAGCCGCGGCGGTAAAAGTCCACGCTGACGCGCCCGGTACGTTTTATTGCGGATGTAAAATTa     <  2:2630067/93‑1 (MQ=255)
                                                                                         ccGAAGGTATCAATAGTTTTTCTCAGGCGAAAGCCGCGGCGGTAAAAGTCCACGCTGACGCGCCCGGTACGTTTTATTGCGGATGTAAAATTa     >  1:872544/1‑93 (MQ=255)
                                                                                         ccGAAGGTATCAATAGTTTTTCTCAGGCGAAAGCCGCGGCGGTAAAAGTCCACGCTGACGCGCCCGGTACGTTTTATTGCGGATGTAAAATTa     <  1:3244161/93‑1 (MQ=255)
                                                                                          cGAAGGTATCAATAGTTTTTCTCAGGCGAAAGCCGCGGCGGTAAAAGTCCACGCTGACGCGCCCGGTACGTTTTATTGCGGATGTAAAATTaa    >  2:1639401/1‑93 (MQ=255)
                                                                                           gAAGGTATCAATAGTTTTTCTCAGGCGAAAGCCGCGGCGGTAAAAGTCCACGCTGACGCGCCCGGTACGTTTTATTGCGGATGTAAAATTAAc   <  2:2342659/93‑1 (MQ=255)
                                                                                           gAAGGTATCAATAGTTTTTCTCAGGCGAAAGCCGCGGCGGTAAAAGTCCACGCTGACGCGCCCGGTACGTTTTATTGCGGATGTAAAATTAAc   <  2:4743067/93‑1 (MQ=255)
                                                                                            aaGGTATCAATAGTTTTTCTCAGGCGAAAGCCGCGGCGGTAAAAGTCCACGCTGACGCGCCCGGTACGTTTTATTGCGGATGTAAAATTAACt  <  1:277488/93‑1 (MQ=255)
                                                                                            |                                                                                            
GGCTCGTTTTAACACGGAGTAAGTGATGTACCGTTATTTGTCTATTGCTGCGGTGGTACTGAGCGCAGCATTTTCCGGCCCGGCGTTGGCCGAAGGTATCAATAGTTTTTCTCAGGCGAAAGCCGCGGCGGTAAAAGTCCACGCTGACGCGCCCGGTACGTTTTATTGCGGATGTAAAATTAACT  >  NC_000913/3088341‑3088525

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 19 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.