| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| JC | NC_000913 | 2,183,895 | (G)7→10 | intergenic (‑79/‑42) | yohL ← / → yohM | hypothetical protein/hypothetical protein |
| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | = 2183888 | 14 (0.080) | 75 (0.430) +GGG |
49/164 | 2.8 | 84.2% | intergenic (‑72/‑49) | yohL/yohM | hypothetical protein/hypothetical protein |
| ? | NC_000913 | 2183889 = | 14 (0.080) | intergenic (‑73/‑48) | yohL/yohM | hypothetical protein/hypothetical protein | |||||
ATCACGGATTGTATGAGACATGGCAACACCTGGTTAACAAGAATATGAAAAATCATAGCACTATTAATCTACTGGGGGGTAGTATCAGGTACT‑‑G‑‑GGGGGGAGTAGAATCAGATTGCCGAATTAATACTAAGAATTATTATCATGACCGAATTTACAACTCTTCTTCAGCAAGGAAACGCC > NC_000913/2183796‑2183975 | aTCACGGATTGTATGAGACATGGCAACACCTGGTTAACAAGAATATGAAAAATCATAGCACTATTAATCTACTGGGGGGTAGTATCAGGTACt > 2:864153/1‑93 (MQ=255) tCACGGATTGTATGAAACAAGGCAACCCCTGGTTAACAAGAATATGAAAAATCATAGCACTATTAATCTTCTGGGGGGTAGTATCAGGTACTg < 1:3861692‑M1/93‑2 (MQ=255) cACGGATTGTATGAGACATGGCACCACCTGGTTAACAAGAATATGAAAAATCATAGCACTATTAATCTACTGGGGGGTAGTATCAGGTACTgg < 2:2589213‑M1/93‑3 (MQ=255) cACGGATTGTATGAGACATGGCAACACCTGGTTAACAAGAATATGAAAAATCATAGCACTATTAATCTACTGGGGGGTAGTATCAGGTACTgg > 2:2264194‑M1/1‑91 (MQ=255) cACGGATTGTATGAGACATGGCAACACCTGGTTAACAAGAATATGAAAAATCATAGCACTATTAATCTACTGGGGGGTAGTATCAGGTACTgg < 2:1647867‑M1/93‑3 (MQ=255) aCGGATTGTATGAGACATGGCAACACCTGGTTAACAAGAATATGAAAAATCATAGCACTATTAATCTACTGGGGGGTAGTATCAGGTACTggg > 2:3489497‑M1/1‑90 (MQ=255) aCGGATTGTATGAGACATGGCAACACCTGGTTAACAAGAATATGAAAAATCATAGCACTATTAATCTACTGGGGGGTAGTATCAGGTACTggg > 2:3302114‑M1/1‑90 (MQ=255) aCGGATTGTATGAGACATGGCAACACCTGGTTAACAAGAATATGAAAAATCATAGCACTATTAATCTACTGGGGGGTAGTATCAGGTACTggg > 1:1615210‑M1/1‑90 (MQ=255) cGGATTGTATGAGACATGGCAACACCTGGTTAACAAGAATATGAAAAATCATAGCACTATTAATCTACTGGGGGGTAGTATCAGGTACTgggg > 1:142314‑M1/1‑89 (MQ=255) ggATTGTATGAGACATGGCAACGCCTGGTTAACAAGAATATGAAAAATCATAGCACTATTAATCTACTGGGGGGCAGTATCAGGTACTggggg < 2:4115379‑M1/93‑6 (MQ=255) ggATTGTATGAGACATGGCAACACCTGGTTAACAAGAATATGAAAAATCATCGCACTATTAATCTACTGGGGGGTAGTATCAGGTACTggggg < 1:3651009‑M1/93‑6 (MQ=255) ggATTGTATGAGACATGGCAACACCTGGTTAACAAGAATATGAAAAATCATAGCACTATTAATCTACTGGGGGGTAGTATCAGGTACTggggg > 1:1467188‑M1/1‑88 (MQ=255) ggATTGTATGAGACATGGCAACACCTGGTTAACAAGAATATGAAAAATCATAGCACTATTAATCTACTGGGGGGTAGTATCAGGTACTggggg < 2:2980393‑M1/93‑6 (MQ=255) ggATTGTATGAGACATGGCAACACCTGGTTAACAAGAATATGAAAAATCATAGCACTATTAATCTACTGGGGGGTAGTATCAGGTACTggggg < 1:4298910‑M1/93‑6 (MQ=255) gATTGTATGAGACATGGCAACACCTGGTTAACAAGAATATGAAAAATCATAGCACTATTAATCTACTGGGGGGTAGTATCAGGTACTgggggg < 2:4003304‑M1/93‑7 (MQ=255) aTTGTATGAGACATGGCAACACCTGGTTAACAAGAATATGAAAAATCATAGCACTATTAATCTACTGGGGGGTAGTATCAGGTACTggggggg < 1:3319552‑M1/93‑8 (MQ=255) ttGTATGAGACATGGCAACACCTGGTTAACAAGAATATGAAAAATCATAGCACTATTAATCTACTGGGGGGTAGTATCAGGTACTgggggggg < 1:423094‑M1/93‑9 (MQ=255) tGTATGAGACATGGCAACACCTGGTTAACAAGAATATGAAAAATCATAGCACTATTAATCTACTGGGGGGTATTATCAGGTACTtgggggggg < 2:4572358‑M1/93‑10 (MQ=255) tATGAGACATGGCAACACCTGGTTAACAAGAATATGAAAAATCATAGCACTATTAATCTACTGGGGGGTAGTATCAGGTACTgggggggggag > 1:4470084‑M1/1‑82 (MQ=255) tATGAGACATGGCAACACCTGGTTAACAAGAATATGAAAAATCATAGCACTATTAATCTACTGGGGGGTAGTATCAGGTACTgggggggggag > 1:185382‑M1/1‑82 (MQ=255) tATGAGACATGGCAACACCTGGTTAACAAGAATATGAAAAATCATAGCACTATTAATCTACTGGGGGGTAGTATCAGGTACTgggggggggag > 2:493472‑M1/1‑82 (MQ=255) tATGAGACATGGCAACACCTGGTTAACAAGAATATGAAAAATCATAGCACTATTAATCTACTGGGGGGTAGTATCAGGTACTgggggggggag > 2:4738304‑M1/1‑82 (MQ=255) gatGAGACATGGCAACACGTGTTTAAGAAGAATATGAAAAATCATAGCACTATTAATCTACTGGGGGGTAGTATCAGGTACTgggggggggag < 2:1767840‑M1/92‑12 (MQ=255) tGAGACATGGCAACACCTGGTTAACAAGAATATGAAAAATCATAGCACTATTAATCTACTGGGGGGTAGTATCAGGTACTgggggggggagtg > 2:35541‑M1/1‑80 (MQ=255) gagaCATGGCAACACCTGGTTAACAAGAATATGAAAAATCATAGCACTATTAATCTACTGGGGGGTAGTATCAGGTACTgggggggggagtag > 2:1558832‑M1/1‑79 (MQ=255) agaCATGGCAACACCTGGTTAACAAGAATATGAAAAATCATAGCACTATTAATCTACTGGGGGGTAGTATCAGGTACTgggggggggagtaga > 2:281703‑M1/1‑78 (MQ=255) gaCATGGCAACCCCTGGTTAACAAGAATATGAAAAATCATAGCACTATAAATCTACTGGGGGGTAGTATCCGGTATTggtggggggggtagaa < 2:2479458‑M1/93‑17 (MQ=255) aCATGACAACACCTGGTTAACAAGAATATGAAAAATCATAGCACTATTAATCTAGTGGGGGGTAGTATCAGGTACTG‑G‑‑GGGGGGAGTAGAATc < 2:3287543/93‑1 (MQ=255) aTGGCAACACCTGGTTAACAAGAATATGAAAAATCATAGCACTATTAATCTACTGGGGGGTAGTATCAGGTACTgggggggggagtagaatca > 1:3977526‑M1/1‑74 (MQ=255) tGGCAACACCTGGTTAACAAGAATATGAAAAATCATAGCACTATTAATCTACTGGGGGGTAGTATCAGGTACTgggggggggagtagaatcag > 1:3342123‑M1/1‑73 (MQ=255) ggCAACACCTGGTTAAAAAGAATATGAAAAATCATAGCAGTATTAATGTTCTGGGGGGTAGTATCAGGTACTgggggggggagtagaatcaga < 1:3847139‑M1/93‑22 (MQ=255) ggCAACACCTGGTTAAAAAGAATATGAAAAATCATAGCACTATTAATCTACGGGGGGGTAGTATCAGGTACTgggggggggagtagaatcaga < 2:798075‑M1/93‑22 (MQ=255) aaCACCTGGTTAACAAGAATATGAAAAATCATAGCACTATTAATCTACTGGGGGGTAGTATCAGGTACTgggggggggagtagaatcagattg > 1:135234‑M1/1‑69 (MQ=255) aaCACCTGGTTAACAAGAATATGAAAAATCATAGCACTATTAATCTACTGGGGGGTAGTATCAGGTACTgggggggggagtagaatcagattg > 2:4232101‑M1/1‑69 (MQ=255) acacCTGGTTAACAAGAATATGAAAAATCATAGCACTATTAATCTACTGGGGGGTAGTATCAGGTACTgggggggggagtagaatcagattgc > 1:2056102‑M1/1‑68 (MQ=255) acacCTGGTTAACAAGAATATGAAAAATCATAGCACTATTAATCTACTGGGGGGTAGTATCAGGTACTG‑G‑‑GGGGGGAGTAGAATCAGATTGcc > 1:1432196/1‑93 (MQ=255) cacCTGGTTAACAAGAATATGAAAAATCATAGCACTATTAATCTACTGGGGGGTAGTATCAGGTACTgggggggggagtagaatcagattgcc > 1:1895977‑M1/1‑67 (MQ=255) cTGGTTAACAAGAATATGAAAAATCATAGCACTATTAATCTACTGGGGGGTAGTATCAGGTACTgggggggggggggacgcatcagattgcca > 1:2401297‑M1/1‑64 (MQ=255) cTGGTTAACAAGAATATGAAAAATCATAGCACTATTAATCTACTGGGGGGTAGTATCAGGTACTgggggggggagtagaatcagattgccgaa > 2:3568792‑M1/1‑64 (MQ=255) gTTAACAAGAATATGAAAAATCATAGCACTATTAATCTACTGGGGGGTAGTATCAGGTACTgggggggggagtagaatcagattgccgaatta > 2:2139716‑M1/1‑61 (MQ=255) ttAACAAGAATATGAAAAATCATAGCACTATTAATCTACTGGGGGGTAGTATCAGGTACTgggggggggagtagaatcagattgccgaattaa > 1:939413‑M1/1‑60 (MQ=255) gtAACAAGAATATGAGAAAGCGTAGCTCTATTAATCTGCTGGGGGGTGGTAGTAGGGCGTGGG‑‑GGGGGGAGTAGAATCAGATTGCCGAATTaa < 2:1357557/92‑1 (MQ=255) tAAAAAGAATATGAAAAAGCATAGCAGTATTAATCTACTGGGGGGTAGTATCAGGTACTgggggggggagtagaatcagattgccgaattaat < 2:2703592‑M1/93‑35 (MQ=255) aaCAAGAATATGAAAAATCATAGCACTATTAATCTACTGGGGGGTAGTATCAGGTACTgggggggggagtagaatcagattgccgaattgata > 1:2444852‑M1/1‑58 (MQ=255) aaCAAGAATATGAAAAATCATAGCACTATTAATCTACTGGGGGGTAGTATCAGGTACTgggggggggagtagaatcagattgccgaattaata > 1:2038348‑M1/1‑58 (MQ=255) aaCAAGAATATGAAAAATCATAGCACTATTAATCTACTGGGGGGTAGTATCAGGT‑CAtgggggggggagtagactaagattgctgaaacaata > 1:2444854‑M1/1‑57 (MQ=255) aCAAGAATATGAAAAATCATAGCACTATTAATCTACTGGGGGGTAGTATCAGGGACT‑‑G‑‑GGGGGGAGGAGAATCAGATTACCGAATTAATACTa > 2:3839742/1‑93 (MQ=255) cAAGAATATGAAAAATCATAGCACTATTAATCTACTGGGGGGTAGTATCAGGTACTgggggggggggtagaatcagattgccgaattaatact > 2:4437851‑M1/1‑56 (MQ=255) cAAGAATATGAAAAATCATAGCACTATTAATCTACTGGGGGGTAGTATCAGGTACTgggggggggagtagaatcagattgccgaattaatact > 1:3423772‑M1/1‑56 (MQ=255) cAAGAATATGAAAAATCATAGCACTATTAATCTACTGGGGGGTAGTATCAGGTACTgggggggggagtagaatcagattgccgaattaatact > 1:3847087‑M1/1‑56 (MQ=255) aGAATATGAAAAATCATAGCACTATTAATCTACTGGGGGGTAGTATCAGGTACTG‑G‑‑GGGGGGAGTAGAATCAGATTGCCGAATTAATACTaaa > 1:2917320/1‑92 (MQ=255) aaTATGAAAAATCATAGCACTATTAATCTACTGGGGGGTAGTATCAGGTACTgggggggggagtagaatcagattgccgaattaatactaaga > 1:3689113‑M1/1‑52 (MQ=255) aaTAAGAAAAATCATCGAAGTACTAATCTGCGGGGGGGAAGTATAGGGTACT‑‑GGTGGGGGGAGTAGAATCAGATTGCCGAATTAATACTAAGa < 2:305642/93‑1 (MQ=255) tGAAAAATCATAGCACTATTAATCTACTGGGGGGTAGTATCAGGTGCTgggggggggagtagaatcagattgccgaattaatactaagaatta < 2:2545317‑M1/93‑46 (MQ=255) aaaagTGATAGCTGTATTAATCTACGGGGGGGTAGTATGAGGTACgggggggggagtagaatcagattgccgaattaatactaagaattatt < 1:4334298‑M1/93‑48 (MQ=255) aaaaTCATAGCACTATTAATCTACTGGGGGGTAGTATCAGGTACTgggggggggggtagaatcagattgccgaattaatactaagaattatta > 1:4020373‑M1/1‑45 (MQ=255) aaaaTCATAGCACTATTAATCTACTGGGGGGTAGTATCAGGTACTgggggggggagtagaatcagattgccgaattaatactaagaattatta > 2:3196925‑M1/1‑45 (MQ=255) aaaaTCATAGCACTATTAATCTACTGGGGGGTAGTATCAGGTACTgggggggggagtagaatcagattgccgaattaatactaagaattatta > 2:1866731‑M1/1‑45 (MQ=255) atatcATAGCAGTATTAATCTGCTGGGGGGCATTATCAGTTACgggggggggagtagaatcagattgccgaattaatactaagaattattat < 1:1065011‑M1/91‑50 (MQ=255) aagcataGCACTATGAATCTGCTGGGGGGTAGTATCAGGT‑CCggggggggggagtagaatcagattgccgaattaatactaagaattattatc < 1:420860‑M1/90‑52 (MQ=255) cATAGCACTATTAATCTACTGGGGGGTAGTATCAGGTACTG‑G‑‑GGGGGGAGTAGAATCAGATTGCCGAATTAATACTAAGAATTATTATCATGa > 2:3132976/1‑93 (MQ=255) aGCACTATTAATCTACTGGGGGGTAGTATCAGGTACTG‑G‑‑GGGGGGAGTAGAATCAGATTGCCGAATTAATACTAAGAATTATTATCATGACCg > 1:2877060/1‑93 (MQ=255) gCACTATTAATCTACTGGGGGGTAGTATCAGGTACTgggggggggagtagaatcagattgccgaattaatactaagaattattatcatgaccg > 1:4322006‑M1/1‑36 (MQ=255) gaCTGTTAATGTACTGGGGTGTATTATCAGGTGCTG‑G‑‑GGGGGGAGTAGAATCAGATTGCCGAATTAATACTAAGAATTATTATCATGACCGaa < 2:3785931/92‑1 (MQ=255) aatATTAATGTACTGGGGGGTAGTATCAGGTACTG‑G‑‑GGGGGGAGTAGAATCAGATTGCCGAATTAATACTAAGAATTATTATCATGACCGAAt < 1:2373532/91‑1 (MQ=255) cTATTAATCTACTGGGGGGTAGTATCAGGTACTgggggggggagtagaatcagattgccgaattaatactaagaattattatcatgaccgaat > 2:2491715‑M1/1‑33 (MQ=255) cTATTAATCTACTGGGGGGTAGTATCAGGTACTgggggggggagtagaatcagattgccgaattaatactaagaattattatcatgaccgaat > 2:3973666‑M1/1‑33 (MQ=255) tATTAATCTACTGGGGGGTAGTATCAGGTACTggggggggggagtagaatcagattgccgaattaatactaagaattattatcatgaccgaat > 1:642266‑M1/1‑32 (MQ=255) ttAATCTACTGGGGGTTAGTATAAGGTACTgggggggggagtagaatcagattgccgaattaatactaagaattattatcatgaccgaattta < 2:2522488‑M1/93‑64 (MQ=255) ttAATCTACTGGGGGGTAGTATCAGGTACTgggggggggagtagaatcagattgccgaattaatactaagaattattatcatgaccgaattta > 2:2334371‑M1/1‑30 (MQ=255) agtCTGCTGGGGGGTAGTATGAGGTACT‑‑G‑‑GGAGGGAGTAGAATCAGATTGCCGAATTAATACTAAGAATTATTATCATGACCGAATTTACAAc < 2:2004035/91‑1 (MQ=255) tCTACTGGGGGGTAGTATCAGGTACTgggggggggagtagaatcagattgccgaattaatactaagaattattatcatgaccgaatttacaac > 1:4326875‑M1/1‑26 (MQ=255) tgctgGGGGGTAATATAAGGT‑CGtgggggggggagcagaatcagattgccgaattaatactaagaattattatcatgaccgaatttacaacac < 2:4194903‑M1/91‑71 (MQ=255) tagtgggGGGTAGTATCAGGT‑TGggggggggggagtagaatcagattgccgaattaatactaagaattattatcatgaccgaatttacaactc < 1:2357121‑M1/90‑71 (MQ=255) tACTGGGGGGTAGTATCAGGTACTgggggggggagtagaatcagattgccgaattaatactaagaattattatcatgaccgaatttacaactc > 2:3110087‑M1/1‑24 (MQ=255) tACTGGGGGGTAGTATCAGGTACTgggggggggagtagaatcagattgccgaattaatactaagaattattatcatgaccgaatttacaactc > 1:4425768‑M1/1‑24 (MQ=255) cTGGGGGGTAGTATCAGGTACTgggggggggagtagaatcagattgccgaattaatactaagaattattatcatgaccgaatttacaactctt > 2:4118148‑M1/1‑22 (MQ=255) tGGGTGCTAGTATCAGTTACgggggggcgagtagaatcagattgccgaattaatactaagaattattatcatgaccgaatttacaactcttc < 1:3130100‑M1/93‑73 (MQ=255) tGGGGGGTAGTATCAGGTACTgggggggggagtagaatcagattgccgaattaatactaagaattattatcatgaccgaatttacaactcttc > 1:2134775‑M1/1‑21 (MQ=255) ggggggTAGTATTATGTACT‑‑G‑‑GGGGAGAGTAGAATCAGATTGCCGAATTAATACTAAGAATTATTATCATGACCGAATTTACAACTCttcttc < 2:258458/93‑1 (MQ=255) gggggTAGTATCAGGTACTggggggggggagtagaatcagattgccgaattaatactaagaattattatcatgaccgaatttacaactcttct > 2:1899261‑M1/1‑19 (MQ=255) ggggTAGTATCAGGTA‑Ttgggggggggagtagaatcagattgccgaattaatactaagaattattatcatgaccgaatttacaactcttcttc < 1:103027‑M1/93‑77 (MQ=255) ggTAGTATAGAGTACTggggggggtagtagaatcagattgccgaattaatactaagaattattatcatgaccgaatttacaactcttcttcag < 2:369070‑M1/93‑78 (MQ=255) gtagtaTCAGGTACTgggggggggagtagaatcagattgccgaattaatactaagaattattatcatgaccgaatttacaactcttcttcagc > 1:3956065‑M1/1‑15 (MQ=255) tagtaTCAGGTACTgggggggggagtagaatcagattgccgaattaatactaagaattattatcatgaccgaatttacaactcttcttcagca > 1:3833467‑M1/1‑14 (MQ=255) agtaTCGGGTGCTgggggagggagtagaatcagattgccgaattaatactaagaattattatcatgaccgaatttacaactcttcttcagcaa < 2:4373899‑M1/93‑81 (MQ=255) agtaTCAGGTACTgggggggggagtagaatcagattgccgaattaatactaagaattattatcatgaccgaatttacaactcttcttcagcaa > 2:1763057‑M1/1‑13 (MQ=255) taTCAGGTACT‑‑G‑‑GGGGGGAGTAGAATCAGATTGCCGAATTAATACTAAGAATTATTATCATGACCGAATTTACAACTCTTCTTCAGCAAGGaa > 2:2112237/1‑93 (MQ=255) tCAGGTACTgggggggggagtcgaatcagattgccgaattaatactaagaattattatcatgaccgaatttacaactcttcttcagcaaggaa > 1:2006424‑M1/1‑9 (MQ=255) tCAGGTACTG‑G‑‑GGGGGGAGTAGAATCAGATTGCCGAATTAATACTAAGAATTATTATCATGACCGAATTTACAACTCTTCTTCAGCAAGGaaa > 2:44774/1‑93 (MQ=255) aGGTACTgggggggggagtagaatcagattgccgaattaatactaagaattattatcatgaccgaatttacaactcttcttcagcaaggaaac > 2:2866042‑M1/1‑7 (MQ=255) aGGTACTgggggggggagtagaatcagattgccgaattaatactaagaattattatcatgaccgaatttacaactcttcttcagcaaggaaac > 2:2072638‑M1/1‑7 (MQ=255) aGGTACTgggggggggagtagaatcagattgccgaattaatactaagaattattatcatgaccgaatttacaactcttcttcagcaaggaaac > 2:515806‑M1/1‑7 (MQ=255) aGGTACTgggggggggagtagaatcagattgccgaattaatactaagaattattatcatgaccgaatttacaactcttcttcagcaaggaaac < 2:819517‑M1/93‑87 (MQ=255) ggTACTgggggggggagtagaatcagattgccgaattaatactaagaattattatcatgaccgaatttacaactcttcttcagcaaggaaacg > 1:2153351‑M1/1‑6 (MQ=255) gTACTgggggggggagtagaatcagattgccgaattaatactaagaattattatcatgaccgaatttacaactcttcttcagcaaggaaacgc > 1:100580‑M1/1‑5 (MQ=255) cTgggggtcgggagtagaatcagattgccgaattaatactaagaattattatcatgaccgaatttacaactcttcttcagcaaggaaacgcct < 2:4348421‑M1/93‑92 (MQ=255) | ATCACGGATTGTATGAGACATGGCAACACCTGGTTAACAAGAATATGAAAAATCATAGCACTATTAATCTACTGGGGGGTAGTATCAGGTACT‑‑G‑‑GGGGGGAGTAGAATCAGATTGCCGAATTAATACTAAGAATTATTATCATGACCGAATTTACAACTCTTCTTCAGCAAGGAAACGCC > NC_000913/2183796‑2183975 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 17 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |