| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| JC | NC_000913 | 2,183,895 | (G)7→10 | intergenic (‑79/‑42) | yohL ← / → yohM | hypothetical protein/hypothetical protein |
| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | = 2183888 | 14 (0.080) | 75 (0.430) +GGG |
49/164 | 2.8 | 84.2% | intergenic (‑72/‑49) | yohL/yohM | hypothetical protein/hypothetical protein |
| ? | NC_000913 | 2183889 = | 14 (0.080) | intergenic (‑73/‑48) | yohL/yohM | hypothetical protein/hypothetical protein | |||||
ACGGATTGTATGAGACATGGCAACACCTGGTTAACAAGAATATGAAAAATCATAGCACTATTAATCTACTGGGGGGTAGTATCAGGTACT‑‑G‑‑GGGGGGAGTA‑GAATCAGATTGCCGAATTAATACTAAGAATTATTATCATGACCGAATTTACAACTCTTCTTCAGCAAGGAAACGCCTGG > NC_000913/2183799‑2183978 | cggattgtatgagacatggcaacacctggttaacaagaatatgaaaaatcatagcactattaatctactggggggtagtatcaggtactgggg > 1:142314‑M2/93‑93 (MQ=255) ggattgtatgagacatggcaacgcctggttaacaagaatatgaaaaatcatagcactattaatctactggggggcagtatcaggtactgggg‑‑g < 2:4115379‑M2/2‑1 (MQ=255) ggattgtatgagacatggcaacacctggttaacaagaatatgaaaaatcatcgcactattaatctactggggggtagtatcaggtactgggg‑‑g < 1:3651009‑M2/2‑1 (MQ=255) ggattgtatgagacatggcaacacctggttaacaagaatatgaaaaatcatagcactattaatctactggggggtagtatcaggtactgggg‑‑g < 2:2980393‑M2/2‑1 (MQ=255) ggattgtatgagacatggcaacacctggttaacaagaatatgaaaaatcatagcactattaatctactggggggtagtatcaggtactgggg‑‑g < 1:4298910‑M2/2‑1 (MQ=255) ggattgtatgagacatggcaacacctggttaacaagaatatgaaaaatcatagcactattaatctactggggggtagtatcaggtactgggg‑‑g > 1:1467188‑M2/92‑93 (MQ=255) gattgtatgagacatggcaacacctggttaacaagaatatgaaaaatcatagcactattaatctactggggggtagtatcaggtactgggg‑‑gg < 2:4003304‑M2/3‑1 (MQ=255) attgtatgagacatggcaacacctggttaacaagaatatgaaaaatcatagcactattaatctactggggggtagtatcaggtactgggg‑‑ggg < 1:3319552‑M2/4‑1 (MQ=255) ttgtatgagacatggcaacacctggttaacaagaatatgaaaaatcatagcactattaatctactggggggtagtatcaggtactgggg‑‑gggg < 1:423094‑M2/5‑1 (MQ=255) tgtatgagacatggcaacacctggttaacaagaatatgaaaaatcatagcactattaatctactggggggtattatcaggtacttggg‑‑ggggg < 2:4572358‑M2/6‑1 (MQ=255) tatgagacatggcaacacctggttaacaagaatatgaaaaatcatagcactattaatctactggggggtagtatcaggtactgggg‑‑gggggag > 1:185382‑M2/86‑91 (MQ=255) tatgagacatggcaacacctggttaacaagaatatgaaaaatcatagcactattaatctactggggggtagtatcaggtactgggg‑‑gggggag > 2:493472‑M2/86‑91 (MQ=255) tatgagacatggcaacacctggttaacaagaatatgaaaaatcatagcactattaatctactggggggtagtatcaggtactgggg‑‑gggggag > 1:4470084‑M2/86‑91 (MQ=255) tatgagacatggcaacacctggttaacaagaatatgaaaaatcatagcactattaatctactggggggtagtatcaggtactgggg‑‑gggggag > 2:4738304‑M2/86‑91 (MQ=255) gatgagacatggcaacacgtgtttaagaagaatatgaaaaatcatagcactattaatctactggggggtagtatcaggtactgggg‑‑gggggag < 2:1767840‑M2/8‑3 (MQ=255) tgagacatggcaacacctggttaacaagaatatgaaaaatcatagcactattaatctactggggggtagtatcaggtactgggg‑‑gggggagtg > 2:35541‑M2/84‑89 (MQ=255) gagacatggcaacacctggttaacaagaatatgaaaaatcatagcactattaatctactggggggtagtatcaggtactggG‑‑GGGGGGAGTA‑g > 2:1558832‑M2/82‑93 (MQ=255) gacatggcaacccctggttaacaagaatatgaaaaatcatagcactataaatctactggggggtagtatccggtattggtG‑‑GGGGGG‑GTA‑Gaa < 2:2479458‑M2/13‑1 (MQ=255) agacatggcaacacctggttaacaagaatatgaaaaatcatagcactattaatctactggggggtagtatcaggtactggG‑‑GGGGGGAGTA‑Ga > 2:281703‑M2/81‑93 (MQ=255) aCATGACAACACCTGGTTAACAAGAATATGAAAAATCATAGCACTATTAATCTAGTGGGGGGTAGTATCAGGTACTG‑G‑‑GGGGGGAGTA‑GAATc < 2:3287543/93‑1 (MQ=255) atggcaacacctggttaacaagaatatgaaaaatcatagcactattaatctactggggggtagtatcaggtactggG‑‑GGGGGGAGTA‑GAATCa > 1:3977526‑M2/77‑93 (MQ=255) tggcaacacctggttaacaagaatatgaaaaatcatagcactattaatctactggggggtagtatcaggtactggG‑‑GGGGGGAGTA‑GAATCAg > 1:3342123‑M2/76‑93 (MQ=255) ggcaacacctggttaaaaagaatatgaaaaatcatagcagtattaatgttctggggggtagtatcaggtactggG‑‑GGGGGGAGTA‑GAATCAGa < 1:3847139‑M2/19‑1 (MQ=255) ggcaacacctggttaaaaagaatatgaaaaatcatagcactattaatctacgggggggtagtatcaggtactggG‑‑GGGGGGAGTA‑GAATCAGa < 2:798075‑M2/19‑1 (MQ=255) aacacctggttaacaagaatatgaaaaatcatagcactattaatctactggggggtagtatcaggtactggG‑‑GGGGGGAGTA‑GAATCAGATTg > 2:4232101‑M2/72‑93 (MQ=255) aacacctggttaacaagaatatgaaaaatcatagcactattaatctactggggggtagtatcaggtactggG‑‑GGGGGGAGTA‑GAATCAGATTg > 1:135234‑M2/72‑93 (MQ=255) acacctggttaacaagaatatgaaaaatcatagcactattaatctactggggggtagtatcaggtactggG‑‑GGGGGGAGTA‑GAATCAGATTGc > 1:2056102‑M2/71‑93 (MQ=255) acacCTGGTTAACAAGAATATGAAAAATCATAGCACTATTAATCTACTGGGGGGTAGTATCAGGTACTG‑G‑‑GGGGGGAGTA‑GAATCAGATTGcc > 1:1432196/1‑93 (MQ=255) cacctggttaacaagaatatgaaaaatcatagcactattaatctactggggggtagtatcaggtactggG‑‑GGGGGGAGTA‑GAATCAGATTGcc > 1:1895977‑M2/70‑93 (MQ=255) ctggttaacaagaatatgaaaaatcatagcactattaatctactggggggtagtatcaggtactgggG‑‑GGGGGGGGGACGCATCAGATTgcca > 1:2401297‑M2/68‑92 (MQ=255) ctggttaacaagaatatgaaaaatcatagcactattaatctactggggggtagtatcaggtactggG‑‑GGGGGGAGTA‑GAATCAGATTGCCGaa > 2:3568792‑M2/67‑93 (MQ=255) gttaacaagaatatgaaaaatcatagcactattaatctactggggggtagtatcaggtactggG‑‑GGGGGGAGTA‑GAATCAGATTGCCGAATTa > 2:2139716‑M2/64‑93 (MQ=255) ttaacaagaatatgaaaaatcatagcactattaatctactggggggtagtatcaggtactggG‑‑GGGGGGAGTA‑GAATCAGATTGCCGAATTaa > 1:939413‑M2/63‑93 (MQ=255) gtAACAAGAATATGAGAAAGCGTAGCTCTATTAATCTGCTGGGGGGTGGTAGTAGGGCGTGGG‑‑GGGGGGAGTA‑GAATCAGATTGCCGAATTaa < 2:1357557/92‑1 (MQ=255) taaaaagaatatgaaaaagcatagcagtattaatctactggggggtagtatcaggtactggG‑‑GGGGGGAGTA‑GAATCAGATTGCCGAATTAAt < 2:2703592‑M2/32‑1 (MQ=255) aacaagaatatgaaaaatcatagcactattaatctactggggggtagtatcaggtcatggG‑‑GGGGGGAGTA‑GACTAAGATTGCTGAAACAATa > 1:2444854‑M2/61‑93 (MQ=255) aacaagaatatgaaaaatcatagcactattaatctactggggggtagtatcaggtactggG‑‑GGGGGGAGTA‑GAATCAGATTGCCGAATTGATa > 1:2444852‑M2/61‑93 (MQ=255) aacaagaatatgaaaaatcatagcactattaatctactggggggtagtatcaggtactggG‑‑GGGGGGAGTA‑GAATCAGATTGCCGAATTAATa > 1:2038348‑M2/61‑93 (MQ=255) caagaatatgaaaaatcatagcactattaatctactggggggtagtatcaggtactgggG‑‑GGGGGG‑GTA‑GAATCAGATTGCCGAATTAATACt > 2:4437851‑M2/60‑93 (MQ=255) aCAAGAATATGAAAAATCATAGCACTATTAATCTACTGGGGGGTAGTATCAGGGACT‑‑G‑‑GGGGGGAGGA‑GAATCAGATTACCGAATTAATACTa > 2:3839742/1‑93 (MQ=255) caagaatatgaaaaatcatagcactattaatctactggggggtagtatcaggtactggG‑‑GGGGGGAGTA‑GAATCAGATTGCCGAATTAATACt > 1:3847087‑M2/59‑93 (MQ=255) caagaatatgaaaaatcatagcactattaatctactggggggtagtatcaggtactggG‑‑GGGGGGAGTA‑GAATCAGATTGCCGAATTAATACt > 1:3423772‑M2/59‑93 (MQ=255) aGAATATGAAAAATCATAGCACTATTAATCTACTGGGGGGTAGTATCAGGTACTG‑G‑‑GGGGGGAGTA‑GAATCAGATTGCCGAATTAATACTaaa > 1:2917320/1‑92 (MQ=255) aatatgaaaaatcatagcactattaatctactggggggtagtatcaggtactggG‑‑GGGGGGAGTA‑GAATCAGATTGCCGAATTAATACTAAGa > 1:3689113‑M2/55‑93 (MQ=255) aaTAAGAAAAATCATCGAAGTACTAATCTGCGGGGGGGAAGTATAGGGTACT‑‑GGTGGGGGGAGTA‑GAATCAGATTGCCGAATTAATACTAAGa < 2:305642/93‑1 (MQ=255) tgaaaaatcatagcactattaatctactggggggtagtatcaggtgctggG‑‑GGGGGGAGTA‑GAATCAGATTGCCGAATTAATACTAAGAatta < 2:2545317‑M2/43‑1 (MQ=255) aaaatcatagcactattaatctactggggggtagtatcaggtactgggG‑‑GGGGGG‑GTA‑GAATCAGATTGCCGAATTAATACTAAGAAttatta > 1:4020373‑M2/49‑93 (MQ=255) aaaagtgatagctgtattaatctacgggggggtagtatgaggtacgggG‑‑GGGGGGAGTA‑GAATCAGATTGCCGAATTAATACTAAGAattatt < 1:4334298‑M2/45‑1 (MQ=255) aaaatcatagcactattaatctactggggggtagtatcaggtactggG‑‑GGGGGGAGTA‑GAATCAGATTGCCGAATTAATACTAAGAAttatta > 2:1866731‑M2/48‑93 (MQ=255) aaaatcatagcactattaatctactggggggtagtatcaggtactggG‑‑GGGGGGAGTA‑GAATCAGATTGCCGAATTAATACTAAGAAttatta > 2:3196925‑M2/48‑93 (MQ=255) atatcatagcagtattaatctgctggggggcattatcagttacgggG‑‑GGGGGGAGTA‑GAATCAGATTGCCGAATTAATACTAAGAATtattat < 1:1065011‑M2/47‑1 (MQ=255) aagcatagcactatgaatctgctggggggtagtatcaggtccgggG‑‑GGGGGGAGTA‑GAATCAGATTGCCGAATTAATACTAAGAATTATTATc < 1:420860‑M2/48‑1 (MQ=255) cATAGCACTATTAATCTACTGGGGGGTAGTATCAGGTACTG‑G‑‑GGGGGGAGTA‑GAATCAGATTGCCGAATTAATACTAAGAATTATTATCATGa > 2:3132976/1‑93 (MQ=255) aGCACTATTAATCTACTGGGGGGTAGTATCAGGTACTG‑G‑‑GGGGGGAGTA‑GAATCAGATTGCCGAATTAATACTAAGAATTATTATCATGACCg > 1:2877060/1‑93 (MQ=255) gcactattaatctactggggggtagtatcaggtactggG‑‑GGGGGGAGTA‑GAATCAGATTGCCGAATTAATACTAAGAATTATTATCATGACCg > 1:4322006‑M2/39‑93 (MQ=255) gaCTGTTAATGTACTGGGGTGTATTATCAGGTGCTG‑G‑‑GGGGGGAGTA‑GAATCAGATTGCCGAATTAATACTAAGAATTATTATCATGACCGaa < 2:3785931/92‑1 (MQ=255) aatATTAATGTACTGGGGGGTAGTATCAGGTACTG‑G‑‑GGGGGGAGTA‑GAATCAGATTGCCGAATTAATACTAAGAATTATTATCATGACCGAAt < 1:2373532/91‑1 (MQ=255) tattaatctactggggggtagtatcaggtactgggG‑‑GGGGGGAGTA‑GAATCAGATTGCCGAATTAATACTAAGAATTATTATCATGACCGAAt > 1:642266‑M2/36‑93 (MQ=255) ctattaatctactggggggtagtatcaggtactggG‑‑GGGGGGAGTA‑GAATCAGATTGCCGAATTAATACTAAGAATTATTATCATGACCGAAt > 2:2491715‑M2/36‑93 (MQ=255) ctattaatctactggggggtagtatcaggtactggG‑‑GGGGGGAGTA‑GAATCAGATTGCCGAATTAATACTAAGAATTATTATCATGACCGAAt > 2:3973666‑M2/36‑93 (MQ=255) ttaatctactgggggttagtataaggtactggG‑‑GGGGGGAGTA‑GAATCAGATTGCCGAATTAATACTAAGAATTATTATCATGACCGAATTTa < 2:2522488‑M2/61‑1 (MQ=255) ttaatctactggggggtagtatcaggtactggG‑‑GGGGGGAGTA‑GAATCAGATTGCCGAATTAATACTAAGAATTATTATCATGACCGAATTTa > 2:2334371‑M2/33‑93 (MQ=255) agtCTGCTGGGGGGTAGTATGAGGTACT‑‑G‑‑GGAGGGAGTA‑GAATCAGATTGCCGAATTAATACTAAGAATTATTATCATGACCGAATTTACAAc < 2:2004035/91‑1 (MQ=255) tctactggggggtagtatcaggtactggG‑‑GGGGGGAGTA‑GAATCAGATTGCCGAATTAATACTAAGAATTATTATCATGACCGAATTTACAAc > 1:4326875‑M2/29‑93 (MQ=255) tgctggggggtaatataaggtcgtggG‑‑GGGGGGAGCA‑GAATCAGATTGCCGAATTAATACTAAGAATTATTATCATGACCGAATTTACaacac < 2:4194903‑M2/67‑3 (MQ=255) tagtggggggtagtatcaggttggggG‑‑GGGGGGAGTA‑GAATCAGATTGCCGAATTAATACTAAGAATTATTATCATGACCGAATTTACAActc < 1:2357121‑M2/67‑1 (MQ=255) tactggggggtagtatcaggtactggG‑‑GGGGGGAGTA‑GAATCAGATTGCCGAATTAATACTAAGAATTATTATCATGACCGAATTTACAActc > 1:4425768‑M2/27‑93 (MQ=255) tactggggggtagtatcaggtactggG‑‑GGGGGGAGTA‑GAATCAGATTGCCGAATTAATACTAAGAATTATTATCATGACCGAATTTACAActc > 2:3110087‑M2/27‑93 (MQ=255) ctggggggtagtatcaggtactggG‑‑GGGGGGAGTA‑GAATCAGATTGCCGAATTAATACTAAGAATTATTATCATGACCGAATTTACAACtctt > 2:4118148‑M2/25‑93 (MQ=255) tgggtgctagtatcagttacgggG‑‑GGGGCGAGTA‑GAATCAGATTGCCGAATTAATACTAAGAATTATTATCATGACCGAATTTACAACtcttc < 1:3130100‑M2/70‑1 (MQ=255) tggggggtagtatcaggtactggG‑‑GGGGGGAGTA‑GAATCAGATTGCCGAATTAATACTAAGAATTATTATCATGACCGAATTTACAACtcttc > 1:2134775‑M2/24‑93 (MQ=255) gggggtagtatcaggtactgggG‑‑GGGGGGAGTA‑GAATCAGATTGCCGAATTAATACTAAGAATTATTATCATGACCGAATTTACAACtcttct > 2:1899261‑M2/23‑93 (MQ=255) ggggggTAGTATTATGTACT‑‑G‑‑GGGGAGAGTA‑GAATCAGATTGCCGAATTAATACTAAGAATTATTATCATGACCGAATTTACAACTCttcttc < 2:258458/93‑1 (MQ=255) ggggtagtatcaggtattggG‑‑GGGGGGAGTA‑GAATCAGATTGCCGAATTAATACTAAGAATTATTATCATGACCGAATTTACAACTCttcttc < 1:103027‑M2/73‑1 (MQ=255) ggtagtatagagtactggG‑‑GGGGGTAGTA‑GAATCAGATTGCCGAATTAATACTAAGAATTATTATCATGACCGAATTTACAACTCTTCTTCAg < 2:369070‑M2/75‑1 (MQ=255) gtagtatcaggtactggG‑‑GGGGGGAGTA‑GAATCAGATTGCCGAATTAATACTAAGAATTATTATCATGACCGAATTTACAACTCTTCTTCAGc > 1:3956065‑M2/18‑93 (MQ=255) tagtatcaggtactggG‑‑GGGGGGAGTA‑GAATCAGATTGCCGAATTAATACTAAGAATTATTATCATGACCGAATTTACAACTCTTCTTCAGCa > 1:3833467‑M2/17‑93 (MQ=255) agtatcgggtgctggG‑‑GGAGGGAGTA‑GAATCAGATTGCCGAATTAATACTAAGAATTATTATCATGACCGAATTTACAACTCTTCTTCAGCaa < 2:4373899‑M2/78‑1 (MQ=255) agtatcaggtactggG‑‑GGGGGGAGTA‑GAATCAGATTGCCGAATTAATACTAAGAATTATTATCATGACCGAATTTACAACTCTTCTTCAGCaa > 2:1763057‑M2/16‑93 (MQ=255) taTCAGGTACT‑‑G‑‑GGGGGGAGTA‑GAATCAGATTGCCGAATTAATACTAAGAATTATTATCATGACCGAATTTACAACTCTTCTTCAGCAAGGaa > 2:2112237/1‑93 (MQ=255) tcaggtactggG‑‑GGGGGGAGTC‑GAATCAGATTGCCGAATTAATACTAAGAATTATTATCATGACCGAATTTACAACTCTTCTTCAGCAAGGaa > 1:2006424‑M2/12‑93 (MQ=255) tCAGGTACTG‑G‑‑GGGGGGAGTA‑GAATCAGATTGCCGAATTAATACTAAGAATTATTATCATGACCGAATTTACAACTCTTCTTCAGCAAGGaaa > 2:44774/1‑93 (MQ=255) aggtactggG‑‑GGGGGGAGTA‑GAATCAGATTGCCGAATTAATACTAAGAATTATTATCATGACCGAATTTACAACTCTTCTTCAGCAAGGAAAc > 2:2866042‑M2/10‑93 (MQ=255) aggtactggG‑‑GGGGGGAGTA‑GAATCAGATTGCCGAATTAATACTAAGAATTATTATCATGACCGAATTTACAACTCTTCTTCAGCAAGGAAAc > 2:2072638‑M2/10‑93 (MQ=255) aggtactggG‑‑GGGGGGAGTA‑GAATCAGATTGCCGAATTAATACTAAGAATTATTATCATGACCGAATTTACAACTCTTCTTCAGCAAGGAAAc > 2:515806‑M2/10‑93 (MQ=255) aggtactggG‑‑GGGGGGAGTA‑GAATCAGATTGCCGAATTAATACTAAGAATTATTATCATGACCGAATTTACAACTCTTCTTCAGCAAGGAAAc < 2:819517‑M2/84‑1 (MQ=255) ggtactggG‑‑GGGGGGAGTA‑GAATCAGATTGCCGAATTAATACTAAGAATTATTATCATGACCGAATTTACAACTCTTCTTCAGCAAGGAAACg > 1:2153351‑M2/9‑93 (MQ=255) gtactggG‑‑GGGGGGAGTA‑GAATCAGATTGCCGAATTAATACTAAGAATTATTATCATGACCGAATTTACAACTCTTCTTCAGCAAGGAAACGc > 1:100580‑M2/8‑93 (MQ=255) tgctggG‑‑GCGGGGAGTA‑GAATCAGATTGCCGAATTAATACTAAGAATTATTATCATGACCGAATTTACAACTCTTCTTCAGCAAGGAAACGcc < 2:379222‑M2/87‑1 (MQ=255) tacgggG‑‑TGGGGGAGTA‑GAATCAGATTGCCGAATTAATACTAAGAATTATTATCATGACCGAATTTACAACTCTTCTTCAGCAAGGAAACGcc < 2:759672‑M2/87‑1 (MQ=255) tgcggG‑‑GGGGGGAGTA‑GAATCAGATTGCCGAATTAATACTAAGAATTATTATCATGACCGAATTTACAACTCTTCTTCAGCAAGGAAACGCCt < 1:4443640‑M2/88‑1 (MQ=255) ctgggG‑‑GTCGGGAGTA‑GAATCAGATTGCCGAATTAATACTAAGAATTATTATCATGACCGAATTTACAACTCTTCTTCAGCAAGGAAACGCCt < 2:4348421‑M2/88‑1 (MQ=255) ctggG‑‑GGGGGGAGTA‑GAATCAGATTGCCGAATTAATACTAAGAATTATTATCATGACCGAATTTACAACGCTTCTTCAGCAAGGAAACGCCTg > 2:2608186‑M2/5‑93 (MQ=255) tggG‑‑GGGGGGAGTA‑GAATCAGATTGCCGAATTAATACTAAGAATTATTATCATGACCGAATTTACAACTCTTCTTCAGCAAGGAAACGCCTgg > 1:1360614‑M2/4‑93 (MQ=255) | ACGGATTGTATGAGACATGGCAACACCTGGTTAACAAGAATATGAAAAATCATAGCACTATTAATCTACTGGGGGGTAGTATCAGGTACT‑‑G‑‑GGGGGGAGTA‑GAATCAGATTGCCGAATTAATACTAAGAATTATTATCATGACCGAATTTACAACTCTTCTTCAGCAAGGAAACGCCTGG > NC_000913/2183799‑2183978 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 17 ≤ ATCG/ATCG < 26 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |