New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913 = 3650480NA (NA)12 (0.020) 5/170 43.0 1.7% coding (349/1017 nt) trs511 IS5 transposase
?NC_000913 = 3914556 758 (1.310)coding (448/1383 nt) atpD membrane‑bound ATP synthase, F1 sector, beta‑subunit
Rejected: Coverage evenness skew score above cutoff.
Rejected: Frequency below/above cutoff threshold.

Only 100 of 775 total aligned reads displayed.

ACCTACGCCCGCAAACACAGAGTAACCGGAGTGCTCGATCGCGATGTTACGAATGAGCTCCATCATGTTTACGGTTTTACCTACACCCGCACCACCGAACAGACCAACTTTACCGCCCTTAGCGAACGGACACATCAGGTCGATAACTTTGATACCGGTTTCCAGCAGTTCCTGAGAGTTTGACAGCTCTT  >  NC_000913/3914461‑3914651
                                                                                               |                                                                                               
aCCTACGCCCGCAAACACAGAGTAACCGGAGTGCTCGATCGCGATGTTCCGAATGAGCTCCATCATGTTTACGGTTTTACCTACACCCGCaccacc                                                                                                 <  2:692492/96‑1 (MQ=255)
aCCTACGCCCGCAAACACAGAGTAACCGGAGTGCTCGATCGCGATGTTACGAATGAGCTCCATCATGTTTACGGTTTTACCTACACCCGCaccacc                                                                                                 >  1:539546/1‑96 (MQ=255)
     cGCCCGCAAACACAGAGTAACCGGAGTGCTCGATCGCGATGTTACGAATGAGCTCCATCATGTTTACGGTTTTACCTACACCCGCACCACCGAACa                                                                                            >  2:5502142/1‑96 (MQ=255)
           cAAACACAGAGTAACCGGAGTGCTCGATCGCGATGTTACGAATGAGCTCCATCATGTTTACGGGTTTACCTACACCCGCACCACCGAACAGACCaa                                                                                      >  2:2616582/1‑96 (MQ=255)
            aaaCACAGAGTAACCGGAGTGCTCGATCGCGATGTTACGAATGAGCTCCATCATGTTTACGGTTTTACCTACACCCGCACCACCGAACAGACCAAc                                                                                     >  2:10082794/1‑96 (MQ=255)
             aaCACAGAGTAACCGGAGTGCTCGATCGCGATGTTACGAATGAGCTCCATCATGTTTACGGTTTTACCTACACCCGCACCACCGAACAGACCAACt                                                                                    <  2:12999676/96‑1 (MQ=255)
              acacAGAGTAACCGGAGTGCTCGATCGCGATGTTACGAATGAGCTCCATCATGTTTACGGTTTTACCTACACCCGCACCACCGAACAGACCAACtt                                                                                   <  2:7851584/96‑1 (MQ=255)
                acaGAGTAACCGGAGTGCTCGATCGCGATGTTACGAATGAGCTCCATCATGTTTACGGTTTTACCTACACCCGCACCACCGAACAGACCAACTTTa                                                                                 >  1:693225/1‑96 (MQ=255)
                   gagTAACCGGAGTGCTCGATCGCGATGTTACGAATGAGCTCCATCATGTTTACGGTTTTACCTACACCCGCACCACCGAACAGACCAACTTTACCg                                                                              <  2:379181/96‑1 (MQ=255)
                   gagTAACCGGAGTGCTCGATCGCGATGTTACGAATGAGCTCCATCATGTTTACGGTTTTACCTACACCCGCACCACCGAACAGACCAACTTTACCg                                                                              >  1:8672583/1‑96 (MQ=255)
                   gagTAACCGGAGTGCTCGATCGCGATGTTACGAATGAGCTCCATCATGTTTACGGTTTTACCTACACCCGCACCACCGAACAGACCAACTTTACCg                                                                              <  2:10638101/96‑1 (MQ=255)
                     gTAACCGGAGGGCTCGATCGCGATGTTACGAATGAGCTCCATCATGTTTACGGTTTTACCTACACCCGCACCACCGAACAGACCAACTTTACCgtc                                                                            >  1:10415351/1‑94 (MQ=255)
                      tAACCGGAGTGCTCGATCGCGATGTTACGAATGAGCTCCATCATGTTTACGGTTTTACCTACACCCGCACCACCGAACAGACGAACTTTACCGccc                                                                           >  2:4620860/1‑96 (MQ=255)
                      tAACCGGAGTGCTCGATCGCGATGTTACGAATGAGCTCCATCATGTTTACGGTTTTACCTACACCCGCACCACCGAACAGACAAACTTTACCGccc                                                                           >  1:2111822/1‑96 (MQ=255)
                         ccGGAGTGCTCGATCGCGATGTTACGAATGAGCTCCATCATGTTTACGGTTTTACCTACACCCGCACCACCGAACAGACCAACTTTACCGCCCTTa                                                                        <  1:14119302/96‑1 (MQ=255)
                          cGGAGTGCTCGATCGCGATGTTACGAATGAGCTCCATCATGTTTACGGTTTTACCTACACCCGCACCACCGAACAGACCAACTTTACCGCCCTTAg                                                                       >  1:1136819/1‑96 (MQ=255)
                          cGGAGTGCTCGATCGCGATGTTACGAATGAGCTCCATCATGTTTACGGTTTTACCTACACCCGCACCACCGAACAGACCAACTTTACCGCCCTTAg                                                                       <  1:5210858/96‑1 (MQ=255)
                           ggAGTGCTCGATCGCGATGTTACGAATGAGCTCCATCATGTTTACGGTTTTACCTACACCCGCACCACCGAACAGACCAACTTTACCGCCCTTAGc                                                                      <  2:7544497/96‑1 (MQ=255)
                           ggAGTGCTCGATCGCGATGTTACGAATGAGCTCCATCATGTTTACGGTTTTACCTACACCCGCACCACCGAACAGACCAACTTTACCGCCCTTAGc                                                                      >  1:1650257/1‑96 (MQ=255)
                           ggAGTGCTCGATCGCGATGTTACGAATGAGCTCCATCATGTTTACGGTTTTACCTACACCCGCACCACCGAACAGACCAACTTTACCGCCCTTAGc                                                                      >  1:4308435/1‑96 (MQ=255)
                            gAGTGCTCGATCGCGATGTTACGAATGAGCTCCATCATGTTTACGGTTTTACCTACACCCGCACCACCGAACAGACCAACTTTACCGCCCTTAGCg                                                                     >  1:11602061/1‑96 (MQ=255)
                             aGTGCTCGATCGCGATGTTACGAATGAGCTCCATCATGTTTACGGTTTTACCTACACCCGCACCACCGAACAGACCAACTTTACCGCCCTTAGCGa                                                                    >  1:2517521/1‑96 (MQ=255)
                               tGCTCGATCGCGATGTTACGAATGAGCTCCATCATGTTTACGGTTTTACCTACACCCGCACCACCGAACAGACCAACTTTACCGCCCTTAGCGAAc                                                                  >  1:9105795/1‑96 (MQ=255)
                               tGCTCGATCGCGATGTTACGAATGAGCTCCATCATGTTTACGGTTTTACCTACACCCGCACCACCGAACAGACCAACTTTACCGCCCTTAGCGAAc                                                                  <  2:8630130/96‑1 (MQ=255)
                               tGCTCGATCGCGATGTTACGAATGAGCTCCATCATGTTTACGGTTTTACCTACACCCGCACCACCGAACAGACCAACTTTACCGCCCTTAGCGAAc                                                                  >  2:13346674/1‑96 (MQ=255)
                                 cTCGATCGCGATGTTACGAATGAGCTCCATCATGTTTACGGTTTTACCTACACCCGCACCACCGAACAGACCAACTTTACCGCCCTTAGCGAACgg                                                                <  2:4420552/96‑1 (MQ=255)
                                 cTCGATCGCGATGTTACGAATGAGCTCCATCATGTTTACGGTTTTACCTACACCCGCACCACCGAACAGACCAACTTTACCGCCCTTAGCGAACgg                                                                <  1:7206367/96‑1 (MQ=255)
                                  tCGATCGCGATGTTACGAATGAGCTCCATCATGTTTACGGTTTTACCTACACCCGCACCACCGAACAGACCAACTTTCCCGCCCTTAGCGAACGGa                                                               <  1:13236199/96‑1 (MQ=255)
                                   cGATCGCGATGTTACGAATGAGCTCCATCATGTTTACGGTTTTACCTACACCCGCACCACCGAACAGACCAACTTTACCGCCCTTAGCGAACGGac                                                              >  1:2408963/1‑96 (MQ=255)
                                    gATCGCGATGTTACGAATGAGCTCCATCATGTTTACGGTTTTACCTACACCCGCACCACCGAACAGACCAACTTTACCGCCCTTAGCGAACGGaga                                                             <  1:11812560/96‑3 (MQ=255)
                                     aTCGCGATGTTACGAATGAGCTCCATCATGTTTACGGTTTTACCTACACCCGCACCACCGAACAGACCAACTTTACCGCCCTTAGCGAACGGaccc                                                            <  1:12083136/96‑3 (MQ=255)
                                     aTCGCGATGTTACGAATGAGCTCCATCATGTTTACGGTTTTACCTACACCCGCACCACCGAACAGACCAACTTTACCGCCCTTAGCGAACGGacac                                                            >  1:2784294/1‑96 (MQ=255)
                                     aTCGCGATGTTACGAATGAGCTCCATCATGTTTACGGTTTTACCTACACCCGCACCACCGAACAGACCAACTTTACCGCCCTTAGCGAACGGacac                                                            <  2:6172823/96‑1 (MQ=255)
                                      tCGCGATGTTACGAATGAGCTCCATCATGTTTACGGTTTTACCTACACCCGCACCACCGAACAGACCAACTTTACCGCCCTTAGCGAACGGAcaca                                                           <  2:11529059/96‑1 (MQ=255)
                                      tCGCGATGTTACGAATGAGCTCCATCATGTTTACGGTTTTACCTACACCCGCACCACCGAACAGACCAACTTTACCGCCCTTAGCGAACGGAcaca                                                           >  1:13549801/1‑96 (MQ=255)
                                        gcgATGTTACGAATGAGCTCCATCATGTTTACGGTTTTACCTACACCCGCACCACCGAACAGACCAACTTTACCGCCCTTAGCGAACGGACACATc                                                         >  1:3710662/1‑96 (MQ=255)
                                        gcgATGTTACGAATGAGCTCCATCATGTTTACGGTTTTACCTACACCCGCACCACCGAACAGACCAACTTTACCGCCCTTAGCGAACGGACACATc                                                         <  1:3121139/96‑1 (MQ=255)
                                          gATGTTACGAATGAGCTCCATCATGTTTACGGTTTTACCTACACCCGCACCACCGAACAGACCAACTTTACCGCCCTTAGCGAACGGACACATCAg                                                       >  2:12302843/1‑96 (MQ=255)
                                          gATGTTACGAATGAGCTCCATCATGTTTACGGTTTTACCTACACCCGCACCACCGAACAGACCAACTTTACCGCCCTTAGCGAACGGACACATCAg                                                       <  2:5259999/96‑1 (MQ=255)
                                          gATGTTACGAATGAGCTCCATCATGTTTACGGGTTTACCTACACCCTCACCAACGTACAGACCAACTTTACCGCCCTTAGCGAACTGACACATCAg                                                       >  1:6003046/1‑96 (MQ=255)
                                            tctgaCGAGTGAGCTCCATCATGTTTACGGGTTTACCTACACCCGCACCACCGAACAGACCAACTTTACCGCCCTTAGCGAACGGACACATCAGGt                                                     >  1:3451375/5‑96 (MQ=255)
                                            tGTTACGAATGAGCTCCATCATGTTTACGGTTTTACCTACACCCGCACCACCGAACAGACCAACTTTACCGCCCTTAGCGAACGGACACATCAGGt                                                     <  2:8968126/96‑1 (MQ=255)
                                            tGTTACGAATGAGCTCCATCATGTTTACGGTTTTACCTACACCCGCACCACCGAACAGACCAACTTTACCGCCCTTAGCGAACGGACACATCAGGt                                                     <  1:14408491/96‑1 (MQ=255)
                                             gTTACGAATGAGCTCCATCATGTTTACGGTTTTACCTACACCCGCACCACCGAACAGACCAACTTTACCGCCCTTAGCGAACGGACACATCAGGTc                                                    >  2:5111561/1‑96 (MQ=255)
                                             gTTACGAATGAGCTCCATCATGTTTACGGTTTTACCTACACCCGCACCACCGAACAGACCAACTTTACCGCCCTTAGCGAACGGACACATCAGGTc                                                    >  2:14271914/1‑96 (MQ=255)
                                               tACGAATGAGCTCCATCATGTTTACGGTTTTACCTACACCCGCACCACCGAACAGACCAACTTTACCGCCCTTAGCGAACGGACACATCAGGTCGa                                                  >  1:2967573/1‑96 (MQ=255)
                                               tACGAATGAGCTCCATCATGTTTACGGTTTTACCTACACCCGCACCACCGAACAGACCAACTTTACCGCCCTTAGCGAACGGACACATCAGGGCGa                                                  >  1:4691076/1‑96 (MQ=255)
                                                aCGAATGAGCTCCATCATGTTTACGGTTTTACCTACCCCCGCACCACCGAACAGACCAACTTTACCGCCCTTAGCGAACGGACACATCAGGTCGAt                                                 <  2:11337248/96‑1 (MQ=255)
                                                 cGAATGAGCTCCATCATGTTTACGGTTTTACCTACACCCGCACCACCGAACAGACCAACTTTACCGCCCTTAGCGAACGGACACATCAGGTCGATa                                                >  1:9219124/1‑96 (MQ=255)
                                                   aaTGAGCTCCATCATGTTTACGGTTTTACCTACCCCCGCACCACCGAACAGACCAACTTTACCGCCCTTAGCGAACGGACACATCAGGTCGATAAc                                              <  1:2641304/96‑1 (MQ=255)
                                                   aaTGAGCTCCATCATGTTTACGGTTTTACCTACACCCGCACCACCGAACAGACCAACTTTACCGCCCTTAGCGAACGGACACATCAGGTCGATAAc                                              >  1:9558352/1‑96 (MQ=255)
                                                   aaTGAGCTCCATCATGTTTACGGTTTTACCTACACCCGCACCACCGAACAGACCAACTTTACCGCCCTTAGCGAACGGACACATCAGGTCGATAAc                                              >  2:578892/1‑96 (MQ=255)
                                                    aTGAGCTCCATCATGTTTACGGTTTTACCTACACCCGCACCACCGAACAGACCAACTTTACCGCCCTTAGCGAACGGACACATCAGGTCGATAACt                                             >  2:4906612/1‑96 (MQ=255)
                                                      gAGCTCCATCATGTTTACGGTTTTACCTACACCCGCACCACCGAACAGACCAACTTTACTGCCCTTAGCGAACGGACACATCAGGTCGATAACttt                                           >  2:6530200/1‑96 (MQ=255)
                                                        gCTCCATCATGTTTACGGTTTTACCTACACCCGCACCACCGAACAGACCAACTTTACCGCCCTTAGCGAACGGACACATCAGGTCGATAACTTTGa                                         >  1:4066466/1‑96 (MQ=255)
                                                         cTCCATCATGTTTACGGTTTTACCTACACCCGCACCACCGAACAGACCAACTTTACCGCCCTTAGCGAACGGACACATCAGGTCGATAACTTTGAt                                        <  2:9798068/96‑1 (MQ=255)
                                                           ccATCATGTTTACGGTTTTACCTACACCCGCACCACCGAACAGACCAACTTTACCGCCCTTAGCGAACGGACACATCAGGTCGATAACTTTGATAc                                      >  2:3573171/1‑96 (MQ=255)
                                                            catcatGTTTACGGTTTTACCTACACCCGCACCACCGAACAGACCAACTTTACCGCCCTTAGCGAACGGACACATCAGGTCGATAACTTTGATAcc                                     <  2:3005278/96‑1 (MQ=255)
                                                            catcatGTTTACGGTTTTACCTACACCCGCACCACCGAACAGACCAACTTTACCGCCCTTAGCGAACGGACACATCAGGTCGATAACTTTGATAcc                                     >  2:8358551/1‑96 (MQ=255)
                                                             atcatGTTTACGGTTTTACCTACACCCGCACCACCGAACAGACCAACTTTACCGCCCTTAGCGAACGGACACATCAGGTCGATAACTTTGATACCg                                    >  2:2757572/1‑96 (MQ=255)
                                                             atcatGTTTACGGTTTTACCTACACCCGCACCACCGAACAGACCAACTTTACCGCCCTTAGCGAACGGACACATCAGGTCGATAACTTTGATACCg                                    <  1:10941544/96‑1 (MQ=255)
                                                              tcatGTTTACGGTTTTACCTACACCCGCACCACCGAACAGACCAACTTTACCGCCCTTAGCGAACGGACACATCAGGTCGATAACTTTGATACCgg                                   >  2:7342839/1‑96 (MQ=255)
                                                               catGTTTACGGTTTTACCTACACCCGCACCACCGAACAGACCAACTTTACCGCCCTTAGCGAACGGACACATCAGGTCGATAACTTTGATACCGGt                                  >  2:11258230/1‑96 (MQ=255)
                                                               catGTTTACGGTTTTACCTACACCCGCACCACCGAACAGACCAACTTTACCGCCCTTAGCGAACGGACACATCAGGTCGATAACTTTCATACCgct                                  <  1:12977418/96‑3 (MQ=255)
                                                                 tGTTTACGGTTTTACCTACACCCGCACCACCGAACAGACCAACTTTACCGCCCTTAGCGAACGGACACATCAGGTCGATAACTTTGATACCGGttt                                <  2:9129008/96‑1 (MQ=255)
                                                                   tttACGGTTTTACCTACACCCGCACCACCGAACAGACCAACTTTACCGCCCTTAGCGAACGGACACATCAGGTCGATAACTTTGATACCGGTTTcc                              <  2:2879203/96‑1 (MQ=255)
                                                                    ttACGGTTTTACCTACACCCGCACCACCGAACAGACCAACTTTACCGCCCTTAGCGAACGGACACATCAGGTCGATAACTTTGATACCGGTTTCca                             <  2:11790167/96‑1 (MQ=255)
                                                                     tACGGTTTTACCTACACCCGCACCACCGAACAGACCAACTTTACCGCCCTTAGCGAACGGACACATCAGGTCGATAACTTTGATACCGGTTTCcag                            <  2:9337968/96‑1 (MQ=255)
                                                                      aCGGTTTTACCTACACCCGCACCACCGAACAGACCAACTTTACCGCCCTTAGCGAACGGACACATCAGGTCGATAACTTTGATACCGGTTTCcagc                           >  2:12677717/1‑96 (MQ=255)
                                                                          ttttCCCTACACCCGCACCACCGAACAGACCAACTTTACCGCCCTTAGCGAACGGACACATCAGGTCGATAACTTTGATACCGGTTTCCAGCAGtt                       <  1:833930/96‑1 (MQ=255)
                                                                          ttttACCTACCCCCGAACCACCGAACAGACCAACTTTACCGCCCTTAGCGAACGGACACATCAGGTCGATAACTTTGATACCGGTTTCCAGCAGtt                       <  2:6003046/96‑1 (MQ=255)
                                                                          ttttACCTACACCCGCACCACCGAACAGACCAACTTTACCGCCCTTAGCGAACGGACACATCAGGTCGATAACTTTGATACCGGTTTCCAGCAGtt                       >  2:3263029/1‑96 (MQ=255)
                                                                            ttACCTACACCCGCACCACCGAACAGACCAACTTTACCGCCCTTAGCGAACGGACACATCAGGTCGATAACTTTGATACCGGTTTCCAGCAGTTcc                     <  1:3825773/96‑1 (MQ=255)
                                                                              aCCTACACCCGCACCACCGAACAGACCAACTTTACCGCCCTTAGCGAACGGACACATCAGGTCGATAACTTTGATACCGGTTTCCAGCAGTTCCTg                   >  2:10436791/1‑96 (MQ=255)
                                                                              aCCTACACCCGCACCACCGAACAGACCAACTTTACCGCCCTTAGCGAACGGACACATCAGGTCGATAACTTTGATACCGGTTTCCAGCAGTTCCTg                   >  2:7260088/1‑96 (MQ=255)
                                                                               ccTACACCCGCACCACCGAACAGACCAACTTTACCGCCCTTAGCGAACGGACACATCAGGTCGATAACTTTGATACCGGTTTCCAGCAGTTCCTga                  >  1:9766540/1‑96 (MQ=255)
                                                                               ccTACACCCGCACCACCGAACAGACCAACTTTACCGCCCTTAACGAACGGACACATCAGGTCGATAACTTTGATACCGGTTTCCAGCAGTTCCTga                  <  1:7576707/96‑1 (MQ=255)
                                                                                cTACACCCGCACCACCGAACAGACCAACTTTACCGCCCTTAGCGAACGGACACATCAGGTCGATAACTTTGATACCGGTTTCCAGCAGTTCCTgag                 >  2:233204/1‑96 (MQ=255)
                                                                                 tACACCCGCACCACCGAACAGACCAACTTTACCGCCCTTAGCGAACGGACACATCAGGTCGATAACTTTGATACCGGTTTCCAGCAGTTCCTgaga                >  2:13886389/1‑96 (MQ=255)
                                                                                    acCCGCGCCACCGAACAGACCAACTTTACCGCCCTTAGCGAACGGACACATCAGGTCGATAACGTTGATACCGGTTTCCAGCAGTTCCTGAGAGtt             <  1:12379702/96‑1 (MQ=255)
                                                                                    acCCGCACCACCGAACAGACCAACTTTACCGCCCTTAGCGAACGGACACATCAGGTCGATAACTTTGATACCGGTTTCCAGCAGTTCCTGAGAGtt             >  1:8045258/1‑96 (MQ=255)
                                                                                    acCCGCACCACCGAACAGACCAACTTTACCGCCCTTAGCGAACGGACACATCAGGTCGATAACTTTGATACCGGTTTCCAGCAGTTCCTGAGAGtt             >  2:10927591/1‑96 (MQ=255)
                                                                                     cccGCCCCACCGAACAGACCAACTTTACCGCCCTTAGCGAACGGACACATCAGGTCGATAACTTTGATACCGGTTTCCAGCAGTTCCTGAGAGttt            <  1:5618219/96‑1 (MQ=255)
                                                                                     cccGCACCACCGAACAGACCAACTTTACCGCCCTTAGCGAACGGACACATCAGGTCGATAACTTTGATACCGGTTTCCAGCAGTTCCTGAGAGttt            <  1:1003171/96‑1 (MQ=255)
                                                                                     cccGCACCACCGAACAGACCAACTTTACCGCCCTTAGCGAACGGACACATCAGGTCGATAACTTTGATACCGGTTTCCAGCAGTTCCTGAGAGttt            <  1:1108682/96‑1 (MQ=255)
                                                                                      ccGCACCACCGAACAGACCAACTTTACCGCCCTTAGCGAACGGACACATCAGGTCGATAACTTTGATACCGGTTTCCAGCAGTTCCTGAGAGTTTg           <  1:194764/96‑1 (MQ=255)
                                                                                      ccGCACCACCGAACAGACCAACTTTACCGCCCTTAGCGAACGGACACATCAGGTCGATAACTTTGATACCGGTTTCCAGCAGTTCCTGAGAGTTTg           <  1:12677717/96‑1 (MQ=255)
                                                                                      ccGCACCACCGAACAGACCAACTTTACCGCCCTTAGCGAACGGACACATCAGGTCGATAACTTTGATACCGGTTTCCAGCAGTTCCTGAGAGTTTg           <  2:1650257/96‑1 (MQ=255)
                                                                                       cGCACCACCGAACAGACCAACTTTCCCGCCCTTAGCGAACGGACACATCAGGTCGATAACTTTGATACCGGTTTCCAGCAGTTCCTGAGAGTTTGa          <  2:4134415/96‑1 (MQ=255)
                                                                                       cGCACCACCGAACAGACCAACTTTACCGCCCTTAGCGAACGGACACATCAGGTCGATAACTTTGATACCGGTTTCCAGCAGTTCCTGAGAGTTTGa          <  2:8091369/96‑1 (MQ=255)
                                                                                       cGCACCACCGAACAGACCAACTTTACCGCCCTTAGCGAACGGACACATCAGGTCGATAACTTTGATACCGGTTTCCAGCAGTTCCTGAGAGTTTGa          >  1:8918486/1‑96 (MQ=255)
                                                                                       cGCACCACCGAACAGACCAACTTTACCGCCCTTAGCGAACGGACACATCAGGTCGATAACTTTGATACCGGTTTCCAGCAGTTCCTGAGAGTTTGa          <  2:12098322/96‑1 (MQ=255)
                                                                                        gCACCACCGAACAGACCAACTTTACCGCCCTTAGCGAACGGACACATCAGGTCGATAACTTTGATACCGGTTTCCAGCAGTTCCTGAGAGTTTGAc         <  1:6633978/96‑1 (MQ=255)
                                                                                            caccGAACAGACCAACTTTACCGCCCTTAGCGAACGGACACATCAGGTCGATAACTTTGATACCGGTTTCCAGCAGTTCCTGAGAGTTTGACAGct     >  2:9535975/1‑96 (MQ=255)
                                                                                            caccGAACAGACCAACTTTACCGCCCTTAGAGAACGGACACATCAGGTCGATAACTTTGATACCGGTTTCCAGAAGTTCCTGAGAGTTTGACAGct     >  2:2175553/1‑96 (MQ=255)
                                                                                             accGAACAGACCAACTTTACCGCCCTTAGCGAACGGACACATCAGGTCGATAACTTTGATACCGGTTTCCAGCAGTTCCTGAGAGTTTGACAGctc    >  2:14031398/1‑96 (MQ=255)
                                                                                              ccGAACAGACCAACTTTACCGCCCTTAGCGAACGGACACATCAGGTCGATAACTTTGATACCGGTTTCCAGCAGTTCCTGAGAGTTTGACAGctct   <  2:2517521/96‑1 (MQ=255)
                                                                                               cGAACAGACCAACTTTACCGCCCTTAGCGAACGGACACATCCGGTCGATAACTTTGATCCCGGTTTCCAGCAGTTCCTGAGAGTTTGACAGCTCtt  <  1:1383654/96‑1 (MQ=255)
                                                                                               cGAACAGACCAACTTTACCGCCCTTAGCGAACGGACACATCAGGTCGATAACTTTGATACCGGGTTCCAGCAGTTCCTGAGAGTTTGACAGCTCtt  >  1:6353640/1‑96 (MQ=255)
                                                                                               cGAACACACCAACTTTACCGCCCTTCGCGAACGGACAAATCAGGTCGATAACTTTGATACCGGTTTCCAGCAGTTCCTGAGAGTTTGACAGCTCtt  <  1:4973529/96‑1 (MQ=255)
                                                                                               |                                                                                               
ACCTACGCCCGCAAACACAGAGTAACCGGAGTGCTCGATCGCGATGTTACGAATGAGCTCCATCATGTTTACGGTTTTACCTACACCCGCACCACCGAACAGACCAACTTTACCGCCCTTAGCGAACGGACACATCAGGTCGATAACTTTGATACCGGTTTCCAGCAGTTCCTGAGAGTTTGACAGCTCTT  >  NC_000913/3914461‑3914651

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 16 ≤ ATCG/ATCG < 26 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.