| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| JC | NC_000913 | 483,561 | (C)6→9 | coding (67/3150 nt) | acrB ← | acridine efflux pump |
| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | = 483555 | 19 (0.080) | 169 (0.680) +CCC |
103/166 | 1.0 | 89.9% | coding (73/3150 nt) | acrB | acridine efflux pump |
| ? | NC_000913 | 483556 = | 19 (0.070) | coding (72/3150 nt) | acrB | acridine efflux pump | |||||
Only 100 of 204 total aligned reads displayed.
TTTCGCATCAGCGCCGGGGTAGGAGGCGGAGATCGTTACTGCCGGCGGTGCAATCGTAGGATATTGCGCCACCGGCAGTTTGAGGATCGCC‑AG‑CCCCCCTGCCAACATGATGATAATGGCGATCACCCACGCAAAAATCGGGCGATCGATAAAGAAATTAGGCATGTCTTAACGGCTCCTGTTT > NC_000913/483463‑483646 | tCAGCGCCGGGGTAGGAGGCGGAGATCGTTACTGCCGGCGGTGCAATCGTAGGATATTGCGCCACCGGCAGTTTGAGGATCGCC‑AGccccccc < 1:1323412‑M1/93‑8 (MQ=255) tCAGCGCCGGGGTAGGAGGCGGAGATCGTTACTGCCGGCGGTGCAATCGTAGGATATTGCGCCACCGGCAGTTTGAGGATCGCC‑AGccccccc > 2:1210358‑M1/1‑86 (MQ=255) cAGCGCCGGGGTAGGAGGCGGAGATCGTTACTGCCGGCGGTGCAATCGTAGGATATTGCGCCACCGGCAGTTTGAGGATCGCC‑AGcccccccc > 1:868360‑M1/1‑85 (MQ=255) aGCGCCGGGGTAGGAGGCGGAGATCGTTACTGCCGGCGGTGCAATCGTAGGATATTGCGCCACCGGCAGTTTGAGGATCGCC‑AGccccccccc < 2:3089455‑M1/93‑10 (MQ=255) aGCGCCGGGGTAGGAGGCGGAGATCGTTACTGCCGGCGGTGCAATCGTAGGATATTGCGCCACCGGCAGTTTGAGGATCGCC‑AGccccccccc < 2:1859411‑M1/93‑10 (MQ=255) gcgcCGGGGTAGGAGGCGGAGATCGTTACTGCCGGCGGTGCAATCGTAGGATATTGCGCCACCGGCAGTTTGAGGATCGCC‑AGccccccccct < 2:272200‑M1/93‑11 (MQ=255) gcgcCGGGGTAGGAGGCGGAGATCGTTACTGCCGGCGGGGCAATCGTAGGATATTGCGCCACCGGCAGGTTGAGGATCGCC‑AGcccccccccc > 1:5780771‑M1/1‑83 (MQ=255) gcCGGGGTAGGAGGCGGAGATCGTTACTGCCGGCGGTGCAATCGTAGGATATTGCGCCACCGGCAGTTTGAGGATCGCC‑AGccccccccctgc < 1:1683032‑M1/93‑13 (MQ=255) gcCGGGGTAGGAGGCGGAGATCGTTACTGCCGGCGGTGCAATCGTAGGATATTGCGCCACCGGCAGTTTGAGGATCGCC‑AGccccccccccgc > 1:4840751‑M1/1‑81 (MQ=255) ccGGGGTAGGAGGCGGAGATCGTTACTGCCGGCGGTGCAATCGTAGGATATTGCGCCACCGGCAGTTTGAGGATCGCC‑AGccccccccctgcc > 1:2840758‑M1/1‑80 (MQ=255) ggggTAGGAGGCGGAGATCGTTACTGCCGGCGGTGCAATCGTAGGATATTGCGCCACCGGCAGTTTGAGGATCGCC‑AGccccccccttgccaa > 2:4885073‑M1/1‑78 (MQ=255) ggggTAGGAGGCGGAGATCGTTACTGCCGGCGGTGCAATCGTAGGATATTGCGCCACCGGCAGTTTGAGGATCGCC‑AGccccccccctgccaa > 1:209610‑M1/1‑78 (MQ=255) gggTAGGAGGCGGAGATCGTTACTGCCGGCGGTGCAATCGTAGGATATTGCGCCACCGGCAGTTTGAGGATCGCC‑AGccccccccctgccaac > 1:994754‑M1/1‑77 (MQ=255) gggTAGGAGGCGGAGATCGTTACTGCCGGCGGTGCAATCGTAGGATATTGCGCCACCGGCAGTTTGAGGATCGCC‑AGccccccccctgccaac > 1:3045133‑M1/1‑77 (MQ=255) gggTAGGAGGCGGAGATCGTTACTGCCGGCAGTGCAATCGTAGGATATTGCGCCACCGGCAGTTTGAGGATCGCC‑AGccccccccctgccaac < 1:1828794‑M1/93‑17 (MQ=255) gTAGGAGGCGGAGATCGTTACTGCCGGCGGTGCAATCGTAGGATATTGCGCCACCGGCAGTTTGAGGATCGCC‑AGccccccccctgccaacat > 1:5931492‑M1/1‑75 (MQ=255) tAGGAGGCGGAGATCGTTACTGCCGGCGGTGCAATCGTAGGATATTGCGCCACCGGCAGTTTGAGGATCGCC‑AGCCCCCCCTGCCAACatgat > 2:1914131/1‑93 (MQ=255) gaggaggcGGAGATCGTTACTGCCGGCGGTGCAATCGTAGGATATTGCGCCACCGGCAGTTTGAGGATCGCC‑AGccccccccctgccaacatg < 1:730036‑M1/92‑20 (MQ=255) aggaggCGGAGATCGTTACTGCCGGCGGTGCAATCGTAGGATATTGCGCCACCGGCAGTTTGAGGATCGCC‑AGccccccccctgcccacatga > 1:3401378‑M1/1‑73 (MQ=255) ggagtCGGAGATCGTTACTGCCGGCGGTGCAATCGTAGGATATTGCGCCACCGGCAGTTTGAGGATCGCC‑AGccccccccctgccaacatgat < 2:6035504‑M1/93‑22 (MQ=255) gaggCGGAGATCGTTACTGCCGGCGGTGCAATCGTAGGATATTGCGCCACCGGCAGTTTGAGGATCGCC‑AGcccccccctgccaacatgatga > 1:1051823‑M1/1‑71 (MQ=255) gaggCGGAGATCGTTACTGCCGGCGGTGCAATCGTAGGATATTGCGCCACCGGCAGTTTGAGGATCGCC‑AGccccccccctgcccacatgatg > 2:4619167‑M1/1‑71 (MQ=255) aggCGGAGATCGTTACTGCCGGCGGTGCAATCGTAGGATATTGCGCCACCGGCAGTTTGAGGATCGCC‑AGccccccccctgccaacatgatga < 2:4175247‑M1/93‑24 (MQ=255) aggCGGAGATCGTTACTGCCGGCGGTGCAATCGTAGGATATTGCGCCACCGGCAGTTTGAGGATCGCC‑AGccccccccctgccaacatgatga < 1:3939757‑M1/93‑24 (MQ=255) aggCGGAGATCGTTACTGCCGGCGGTGCAATCGTAGGATATTGCGCCACCGGCAGTTTGAGGATCGCC‑AGCCCCCCCTGCCAACATGATGATa < 1:1270318/93‑1 (MQ=255) ggCGGAGATCGTTACTGCCGGCGGTGCAATCGTAGGATATTGCGCCACCGGCAGTTTGAGGATCGCC‑AGccccccccctgcccacatgaagat > 2:1399076‑M1/1‑69 (MQ=255) ggCGGAGATCGTTACTGCCGGCGGTGCAATCGTAGGATATTGCGCCACCGGCAGTTTGAGGATCGCC‑AGccccccccctgccaacatgatgat > 1:740703‑M1/1‑69 (MQ=255) ggCGGAGATCGTTACTGCCGGCGGTGCAATCGTAGGATATTGCGCCACCGGCAGTTTGAGGATCGCC‑AGccccccccctgccaacatgatgat < 2:1972369‑M1/93‑25 (MQ=255) cGGAGATCGTTACTGCCGGCGGTGCAATCGTAGGATATTGCGCCACCGGCAGTTTGAGGATCGCC‑AGccccccccctgccaacatgatgataa < 1:4386625‑M1/93‑27 (MQ=255) ggAGATCGTTACTGCCGGCGGTGCAATCGTAGGATATTGCGCCACCGGCAGTTTGAGGATCGCC‑AGccccccccctgccaacatgatgataat < 2:3180356‑M1/93‑28 (MQ=255) gagaTCGTTACTGCCGGCGGTGCAATCGTAGGATATTGCGCCACCGGCAGTTTGAGGATCGCC‑AGccccccccctgccaacatgatgataatg < 2:4202429‑M1/93‑29 (MQ=255) agaTCGTTACTGCCGGCGGTGCAATCGTAGGATATTGCGCCACCGGCAGTTTGAGGATCGCC‑AGccccccccctgccaacatgatgataatgg < 2:3354404‑M1/93‑30 (MQ=255) gaTCGTTACTGCCGGCGGTGCAATCGTAGGATATTGCGCCACCGGCAGTTTGAGGATCGCC‑AGctccccccctgcaaaaatgatgataatggg > 2:4495521‑M1/1‑63 (MQ=255) gaTCGTTACTGCCGGCGGTGCAATCGTAGGATATTGCGCCACCGGCAGTTTGAGGATCGCC‑AGccccccccctgccaacatgatgataatggc < 1:5002125‑M1/93‑31 (MQ=255) gaTCGTTACTGCCGGCGGTGCAATCGTAGGATATTGCGCCACCGGCAGTTTGAGGATCGCC‑AGccccccccctgccaacatgatgataatggc < 2:2476347‑M1/93‑31 (MQ=255) gaTCGTTACTGCCGGCGGTGCAATCGTAGGATATTGCGCCACCGGCAGTTTGAGGATCGCC‑AGccccccccctgccaacatgatgataatggc > 1:837364‑M1/1‑63 (MQ=255) aTCGTTACTGCCGGCGGTGCAATCGTAGGATATTGCGCCACCGGCAGTTTGAGGATCGCC‑AGccccccccctgccaacatgatgataatggcg < 2:2004488‑M1/93‑32 (MQ=255) tCGTTACTGCCGGCGGTGCAATCGTAGGATATTGCGCCACCGGCAGTTTGAGGATCGCC‑AGccccccccctgccaacatgatgataatggcga < 2:5761605‑M1/93‑33 (MQ=255) cGTTACTGCCGGCGGTGCAATCGTAGGATATTGCGCCACCGGCAGTTTGAGGATCGCC‑AGccccccccctgcccacctgatgataatggcgat > 2:1684394‑M1/1‑60 (MQ=255) cGTTACTGCCGGCGGTGCAATCGTAGGATATTGCGCCACCGGCAGTTTGAGGATCGCC‑AGccccccccctgccaacatgatgataatggcgat < 1:1714560‑M1/93‑34 (MQ=255) tACTGCCGGCGGTGCAATCGTAGGATATTGCGCCACCGGCAGTTTGAGGATCGCC‑AGccccccccctgccaacatgatgataatggcgatcac > 1:425399‑M1/1‑57 (MQ=255) aCTGCCGGCGGTGCAATCGTAGGATATTGCGCCACCGGCAGTTTGAGGATCGCC‑AGcccccccccctgccaacatgatgataaaggcgatcac > 2:4977411‑M1/1‑56 (MQ=255) cTGCCGGCGGTGCAATCGTAGGATATTGCGCCACCGGCAGTTTGAGGATCGCC‑AGccccccccctgccaacatgatgataatggcgatcaccc < 2:4758620‑M1/93‑39 (MQ=255) gCCGGCGGTGCAATCGTAGGATATTGCGCCACCGGCAGTTTGAGGATCGCC‑AGccccccccctgccaacatgatgataatggcgatcacccac < 2:1893032‑M1/93‑41 (MQ=255) gCCGGCGGTGCAATCGTAGGATATTGCGCCACCGGCAGTTTGAGGATCGCC‑AGCCCCCCCTGCCAACATGATGATAATGGCGATCACCCACGc > 2:3256066/1‑93 (MQ=255) cggcggTGCAATCGTAGGATATTGCGCCACCGGCAGTTTGAGGATCGCC‑AGccccccccctgccaacatgatgataatggcgatcacccacgc > 1:1265419‑M1/1‑51 (MQ=255) gcggTGCAATCGTAGGATATTGCGCCACCGGCAGTTTGAGGATCGCC‑AGCCCCCCCTGCCAACATGATGATAATGGCGATCACCCACGCaaaa > 1:6257420/1‑93 (MQ=255) gTGCAATCGTAGGATATTGCGCCACCGGCAGTTTGAGGATCGCC‑AGccccccccctgccaacatgatgataatggcgatcacccacgcaaaaa < 1:5723248‑M1/93‑48 (MQ=255) tGCAATCGTAGGATATTGCGCCACCGGCAGTTTGAGGATCGCC‑AGccccccccctgccaacatgatgataatggcgatcacccacgcaaaaat < 2:4784606‑M1/93‑49 (MQ=255) attcgTAGTATATGGCGCCCCCGGCAGTTTGAGGATCGCC‑Acccccccctgccaacatgatgataatggcgatcacccacgcaaaaatcggg < 1:357828‑M1/91‑52 (MQ=255) aaTCGTAGGATATTGCGCCACCGGCAGTTTGAGGATCGCC‑AGcccccccccttcccacatgaagataatggcgatccaccacccaaaaaaccg > 1:2722981‑M1/1‑42 (MQ=255) aaTCGTAGGATATTGCGCCACCGGCAGTTTGAGGATCGCC‑AGccccccccctgccaacatgatgataatggcgatcacccacgcaaaaatcgg < 1:1228818‑M1/93‑52 (MQ=255) aTCGTAGGATATTGCGCCACCGGCAGTTTGAGGATCGCC‑AGccccccccctgccaacatgatgataatggcgatcacccacgcaaaaatcggg > 1:5287791‑M1/1‑41 (MQ=255) aTCGTAGGATATTGCGCCACCGGCAGTTTGAGGATCGCC‑AGccccccccctgccaacatgatgataatggcgatcacccacgcaaaaatcggg < 2:1787358‑M1/93‑53 (MQ=255) aTCGTAGGATATTGCGCCACCGGCAGTTTGAGGATCGCC‑AGCCCCCCCTGCCAACATGATGATAATGGCGATCACCCACGCAAAAATCGGGcg < 2:1959974/93‑1 (MQ=255) tCGTAGGATATTGCGCCACCGGCAGTTTGAGGATCGCC‑AGccccccccctgccaacatgatgataatggcgatcacccacgcaaaaatcgggc < 1:4344169‑M1/93‑54 (MQ=255) tCGTAGGATATTGCGCCACCGGCAGTTTGAGGATCGCC‑AGccccccccctgccaacatgatgataatggcgatcacccacgcaaaaatcgggc > 1:1468116‑M1/1‑40 (MQ=255) tCGTAGGATATTGCGCCACCGGCAGTTTGAGGATCGCC‑AGccccccccctgccaacatgatgataatggcgatcacccacgcaaaaatcgggc > 1:3654336‑M1/1‑40 (MQ=255) acgTAGGATATTGCGCCCCCGGCAGTTTGAGGATCGCCAACccccccccctgccaacatgatgataatggcgatcacccacgcaaaaatcggg < 1:6375750‑M1/92‑53 (MQ=255) ggATATTGCGCCACCGGCAGTTTGAGGATCGCC‑AGccccccccctgccaacatgatgataatggcgattcaccccacaaaaatacggcgatcc > 2:5730752‑M1/1‑35 (MQ=255) ggATATTGCGCCACCGGCAGTTTGAGGATCGCC‑AGccccccccctgccaacatgatgataatggcgatcacccacgcaaaaatcgggcgatcg < 2:1321611‑M1/93‑59 (MQ=255) gATATTGCGCCACCGGCAGTTTGAGGATCGCC‑AGccccccccctgccaacatgatgataatggcgatcacccacgcaaaaatcgggcgatcga < 1:3754102‑M1/93‑60 (MQ=255) atatTGCGCCACCGGCAGTTTGAGGATCGCC‑AGccccccccctgccaacatgatgataatggcgatcacccacgcaaaaatcgggcgatcgat < 1:2632365‑M1/93‑61 (MQ=255) atatTGCGCCACCGGCAGTTTGAGGATCGCC‑AGCCCCCCCTGCCAACATGATGATAATGGCGATCACCCACGCAAAAATCGGGCGATCGATaa < 2:6371656/93‑1 (MQ=255) tatTGCGCCACCGGCAGTTTGAGGATCGCC‑AGccccccccctgccaacatgatgataatggcgatcacccacgcaaaaatcgggcgatcgata > 1:2606243‑M1/1‑32 (MQ=255) tatTGCGCCACCGGCAGTTTGAGGATCGCC‑AGccccccccctgccaacatgatgataatggcgatcacccacgcaaaaatcgggcgatcgata < 2:6191186‑M1/93‑62 (MQ=255) atTGCGCCACCGGCAGTTTGGGGATCGCC‑AGccccccccctgccaacatgatgataatggcgatcacccacgcaaaaatcgggcgatcgataa < 1:3261519‑M1/93‑63 (MQ=255) atTGCGCCACCGGCAGTTTGAGCATCGCC‑AGCCCCCCCTGCCAACATGATGATAATGGCGATCACCCACGCAAAAATCGGGCGATCGATAAAg < 1:5592378/93‑1 (MQ=255) tGCGCCACCGGCAGTTTGAGGATCGCC‑AGcccccccctgccaacatgatgataatggcgatcacccacgcaaaaatcgggcgatcgataaaga < 2:3672910‑M1/93‑65 (MQ=255) tGCGCCACCGGCAGTTTGAGGATCGCC‑AGCCCCCCCTGCCAACATGATGATAATGGCGATCACCCACGCAAAAATCGGGCGATCGATAAAGaa > 2:6260540/1‑93 (MQ=255) ccACCGGCAGTTTGAGGATCGCC‑AGccccccccctgccaacatgatgataatggcgatcacccacgcaaaaatcgggcgatcgataaagaaat < 1:2177182‑M1/93‑69 (MQ=255) ccACCGGCAGTTGGAGGATCGCC‑AGccccccccctgccaacatgatgataatggcgatcacccacgcaaaaatcgggcgatcgataaagaaat < 1:4602966‑M1/93‑69 (MQ=255) cACCGGCAGTTTGAGGATCGCC‑AGCCCCCCCTGCCAACATGATGATAATGGCGATCACCCACGCAAAAATCGGGCGATCGATAAAGAAATTAg > 1:5256903/1‑93 (MQ=255) ccgggcagTTTGAGGATCGCC‑AGccccccccctgccaacatgatgataatggcgatcacccacgcaaaaatcgggcgatcgataaagaaatta < 1:3424854‑M1/90‑71 (MQ=255) cccgCCAGTTTGAGAATCGCC‑ACccccccccctgccaacatgatgataatggcgatcacccacgcaaaaatcgggcgatcgataaagaaatta < 2:2775693‑M1/92‑71 (MQ=255) ccGGCAGTTTGAGGATCGCC‑AGccccccccctgccaacatgatgataatggcgatcacccacgcaaaaatcgggcgatcgataaagaaattag < 2:5239253‑M1/93‑72 (MQ=255) cGGCAGTTTGAGGATCGCC‑AGccccccccctgccaacatgatgataatggcgatcacccacgcaaaaatcgggcgatcgataaagaaattagg < 2:110265‑M1/93‑73 (MQ=255) cGGCAGTTTGAGGATCGCC‑AGCCCCCCCTGCCAACATGATGATAATGGCGATCACCCACGCAAAAATCGGGCGATCGATAAAGAAATTAGGCa < 1:4727136/93‑1 (MQ=255) gCAGTTTGAGGATCGCC‑AGccccccccctgccaacatgatgataatggcgatcacccacgcaaaaatcgggcgatcgataaagaaattaggca < 2:5086516‑M1/93‑75 (MQ=255) cAGTTTGAGGATCGCC‑AGccccccccctgccaacatgatgataatggcgatcacccacgcaaaaatcgggcgatcgataaagaaattaggcat < 2:3882638‑M1/93‑76 (MQ=255) aGTTTGAGGATCGCC‑AGcccccccctgccaacatgatgataatggcgatcacccacgcaaaaatcgggcgatcgataaagaaattaggcatgt < 1:581774‑M1/93‑77 (MQ=255) aGTTTGAGGATCGCC‑AGccccccccctgccaacatgatgataatggcgatcacccacgcaaaaatcgggcgatcgataaagaaattaggcatg < 1:6111145‑M1/93‑77 (MQ=255) aGTTTGAGGATCGCC‑AGccccccccctgccaacatgatgataatggcgatcacccacgcaaaaatcgggcgatcgataaagaaattaggcatg > 2:6501946‑M1/1‑17 (MQ=255) aGTTTGAGGATCGCC‑AGCCCCCCCTGCCAACATGATGATAATGGCGATCACCCACGCAAAAATCGGGCGATCGATAAAGAAATTAGGCATGTc > 1:3621055/1‑93 (MQ=255) tttGAGGATCGCC‑AGccccccccctgccaacatgatgataatggcgatcacccacgcaaaaatcgggcgatcgataaagaaattaggcatgtc < 2:5484248‑M1/93‑79 (MQ=255) tGAGGATCGCC‑GGccccccccctgccaacatgatgataatggcgatcacccacgcaaaaatcgggcgatcgataaagaaattaggcatgtctt < 1:6547132‑M1/93‑81 (MQ=255) aGGATCGCC‑AGccccccccctgccaacatgatgataatggcgatcacccacgcaaaaatcgggcgatcgataaagaaattaggcatgtcttaa < 1:1973228‑M1/93‑83 (MQ=255) aGGATCGCC‑AGccccccccctgccaacatgatgataatggcgatcacccacgcaaaaatcgggcgatcgataaagaaattaggcatgtcttaa < 2:3606946‑M1/93‑83 (MQ=255) ggATCGCC‑AGccccccccctgccaacatgatgataatggcgatcacccacgcaaaaatcgggcgatcgataaagaaattaggcatgtcttaac > 2:4428207‑M1/1‑10 (MQ=255) ggATCGCC‑AGccccccccctgccaacatgatgataatggcgatcacccacacaaaaatcgggcgatcgataaagaaattaggcatgtcttaac > 2:890436‑M1/1‑10 (MQ=255) gATCGCC‑AGccccccccctgccaacatgatgataatggcgatcacccacgcaaaaatcgggcgatcgataaagaaattaggcatgtcttaacg < 2:2935165‑M1/93‑85 (MQ=255) aTCGCC‑AGccccccccccgccaacatgatgataatggcgatcacccacgcaaaaatcgggcgatcgataaagaaattaggcatgtcttaacgg > 2:3568550‑M1/1‑8 (MQ=255) ccccc‑agccccccccctgccaacatgatgataatggcgatcacccacgcaaaaatcgggcgatcgataaagaaattaggcatgtcttaacggc < 1:2460633‑M1/90‑87 (MQ=255) cGCC‑AGccccccccctgccaacatgatgataatggcgatcacccacgcaaaaatcgggcgatcgataaagaaattaggcatgtcttaacggct < 1:6233972‑M1/93‑88 (MQ=255) gCC‑AGccccccccctgccaacatgatgataatggcgatcacccacgcaaaaatcgggcgatcgataaagaaattaggcatgtcttaacggctc > 1:2542022‑M1/1‑5 (MQ=255) gCC‑AGccccccccctgccaacatgatgataatggcgatcacccacgcaaaaatcgggcgatcgataaagaaattaggcatgtcttaacggctc < 2:2409147‑M1/93‑89 (MQ=255) cc‑AGccccccccctgccaacatgatgataatggcgatcacccacgcaaaaatcgggcgatcgataaagaaattaggcatgtcttaacggctcc < 1:6250780‑M1/93‑90 (MQ=255) cc‑ACccccccccctgccaacatgatgataatggcgatcacccacgcaaaaatcgggcgatcgataaagaaattaggcatgtcttaacggctcc < 2:5226718‑M1/93‑90 (MQ=255) aGccccccccctgccaacatgatgataatggcgatcacccacgcaaaaatcgggcgatcgataaagaaattaggcatgtcttaacggctcctg > 2:3152239‑M1/1‑2 (MQ=255) gccccccccctgccaacatgatgataatggagatcacccacgcaaaaatcgggcgatcgataaagaaattaggcatgtcttaacggctcctgt > 1:5898654‑M1/1‑1 (MQ=255) | TTTCGCATCAGCGCCGGGGTAGGAGGCGGAGATCGTTACTGCCGGCGGTGCAATCGTAGGATATTGCGCCACCGGCAGTTTGAGGATCGCC‑AG‑CCCCCCTGCCAACATGATGATAATGGCGATCACCCACGCAAAAATCGGGCGATCGATAAAGAAATTAGGCATGTCTTAACGGCTCCTGTTT > NC_000913/483463‑483646 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 20 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |