New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913 = 1207028122 (0.320)112 (0.350) 71/152 2.2 48.4% coding (305/630 nt) ycfK hypothetical protein
?NC_000913 = 1208825 138 (0.430)coding (57/540 nt) b1157 putative tail fiber protein

Only 100 of 542 total aligned reads displayed.

CGCGCTGCTGTTAAGCCGCAAGAATCCGTTTGGCGATATCAAATCGGATGGCACTGTGCAAACGGCTCTCGAAAACCTTGGTTTGGGAGAAGGAGCAAAACTCAATGCAGCAACGGCTACATTAGGACGCACCGGTTTCATAGCTATACCGGTTATGATTGGTGGTATTGAGCAATCAGTAATCA  >  NC_000913/1206936‑1207120
                                                                                            |                                                                                            
ccaataagcatgttaaatccccctggtaaaagcaggaatgatgccatttgcttgttatttcttcattttcataaacgTTGGTTTGGGAGAAgg                                                                                              >  1:9443090‑M1/78‑93 (MQ=255)
ccaataagcatgttaaatccccctggtaaaagcaggaatgatgccatttgcttgttatttcttcattttcataaacgTTGGTTTGGGAGAAgg                                                                                              <  1:554410‑M1/16‑1 (MQ=255)
ccaataagcatgttaaatccccctggtaaaagcaggaatgatgccatttgcttgttatttcttcattttcataaacgTTGGTTTGGGAGAAgg                                                                                              >  2:8547265‑M1/78‑93 (MQ=255)
 caataagcatgttaaatccccctggtaaaagcaggaatgatgccatttgcttgttatttcttcattttcataaacgTTGGTTTGGGAGAAGGa                                                                                             <  1:4644701‑M1/17‑1 (MQ=255)
  aataagcatgttaaatccccctggtaaaagcaggaatgatgccatttgcttgttatttcttcattttcataaacgTTGGTTTGGGAGAAGGAg                                                                                            <  1:5433463‑M1/18‑1 (MQ=255)
    taagcatgttaaatccccctggtaaaagcaggaatgatgccatttgcttgttatttcttcattttcataaacgTTGGTTTGGGAGAAGGAGCa                                                                                          <  1:7141926‑M1/20‑1 (MQ=255)
    ctgctgTTAAGCCGCAAGAATCCGTTTGGCGATATCAAATCGGATGGCACTGTGCAAACGGCTCTCGAAAACCTTGGTTTGGGAGAAGGctct                                                                                          >  1:8107174‑M1/1‑89 (MQ=255)
     tgctgTTAAGCCGCAAGAATCCGTTTGGCGATATCAAATCGGATGGCACTGTGCAAACGGCTCTCGAAAACCTTGGTTTGGGAGAAGGAGCaa                                                                                         <  2:731355/93‑1 (MQ=255)
     aagcatgttaaatccccctggtaaaagcaggaatgatgccatttgcttgttatttcttcattttcataaacgTTGGTTTGGGAGAAGGAGCaa                                                                                         <  2:3564701‑M1/21‑1 (MQ=255)
       ctgTTAAGCCGCAAGAATCCGTTTGGCGATATCAAATCGGATGGCACTGTGCAAACGGCTCTCGAAAACCTTGGTTTGGGAGAAGGctctgca                                                                                       <  2:7828104‑M1/93‑8 (MQ=255)
          tgttaaatccccctggtaaaagcaggaatgatgccatttgcttgttatttcttcattttcataaacgTTGGTTTGGGAGAAGGAGCAAAACTc                                                                                    <  2:1702632‑M1/26‑1 (MQ=255)
          tgttaaatccccctggtaaaagcaggaatgatgccatttgcttgttatttcttcattttcataaacgTTGGTTTGGGAGAAGGAGCAAAACTc                                                                                    <  1:1648742‑M1/26‑1 (MQ=255)
          tgttaaatccccctggtaaaagcaggaatgatgccatttgcttgttatttcttcattttcataaacgTTGGTTTGGGAGAAGGAGCAAAACTc                                                                                    <  2:819415‑M1/26‑1 (MQ=255)
              aaatccccctggtaaaagcaggaatgatgccatttgcttgttatttcttcattttcataaacgTTGGTTTGGGAGAAGGAGCAAAACTCAATg                                                                                <  2:2665787‑M1/30‑1 (MQ=255)
               ccGCAAGAATCCGTTTGGCGATATCAAATCGGATGGCACTGTGCAAACGGCTCTCGAAAACCTTGGTTTGGGAGAAGGctctgcattacctgt                                                                               <  1:8253069‑M1/93‑16 (MQ=255)
               ccGCAAGAATCCGTTTGGCGATATCAAATCGGATGGCACTGTGCAAACGGCTCTCGAAAACCTTGGTTTGGGAGAAGGAGCAAAACTCAATgc                                                                               <  1:3620584/93‑1 (MQ=255)
                cGCAAGAATCCGTTTGGCGATATCAAATCGGATGGCACTGTGCAAACGGCTCTCGAAAACCTTGGTTTGGGAGAAGGctctgcattacctgtt                                                                              <  1:5291920‑M1/93‑17 (MQ=255)
                  ccccctggtaaaagcaggaatgatgccatttgcttgttatttcttcattttcataaacgTTGGTTTGGGAGAAGGAGCAAAACTCAATgcagc                                                                            >  2:1421624‑M1/60‑93 (MQ=255)
                  ccccctggtaaaagcaggaatgatgccatttgcttgttatttcttcattttaataaacgTTGGTTTGGGAGAAGGAGCAAAACTCAATgcagc                                                                            <  1:4400534‑M1/34‑1 (MQ=255)
                     gAATCCGTTTGGCGATATCAAATCGGATGGCACTGTGCAAACGGCTCTCGAAAACCTTGGTTTGGGAGAAGGAGCAAAACTCAATGCAGCAAc                                                                         <  2:8019820/93‑1 (MQ=255)
                          taaaagcaggaatgatgccatttgcttgttatttcttcattttcataaacgTTGGTTTGGGAGAAGGAGCAAAACTCAATGCAGCAACGGCTa                                                                    <  1:4803433‑M1/42‑1 (MQ=255)
                           gTTTGGCGATATCAAATCGGATGGCACTGTGCAAACGGCTCTCGAAAACCTTGGTTTGGGAGAAGGctctgcattccctgttggtgtcccggt                                                                   <  1:9941979‑M1/93‑28 (MQ=255)
                           aaaagcaggaatgatgccatttgcttgttatttcttcattttcataaacgTTGGTTTGGGAGAAGGAGCAAAACTCAATGCAGCAACGGCTAc                                                                   <  2:4280819‑M1/43‑1 (MQ=255)
                           aaaagcaggaatgatgccatttgcttgttatttcttcattttcataaacgTTGGTTTGGGAGAAGGAGCAAAACTCAATGCAGCAACGGCTAc                                                                   >  2:161175‑M1/51‑93 (MQ=255)
                            tttGGCGATATCAAATCGGATGGCACTGTGCAAACGGCTCTCGAAAACCTTGGTTTGGGAGAAGGAGCAAAACTCAATGCAGCAACGGCTACa                                                                  >  1:9837705/1‑93 (MQ=255)
                               ggCGAGAGCGAATCGTGTGGCTCTGTGCAAACGTCTCTCGAAAACCTTGGTTTTGGAGAAGGctctgcattacctgttggtgtcccggttccg                                                               <  1:6160407‑M1/93‑32 (MQ=255)
                               gcaggaatgatgccatttgcttgttatttcttcattttcataaacgTTGGTTTGGGAGAAGGAGCAAAACTCAATGCAGCAACGGCTACATTa                                                               >  2:1928396‑M1/47‑93 (MQ=255)
                                gCGATATCAAATCGGATGGCACTGTGCAAACGGCTCTCGAAAACCTTGGTTTGGGAGAAGGctctgcattacctgttggtgtcccggttccgt                                                              <  2:3909637‑M1/93‑33 (MQ=255)
                                gCGATATCAAATCGGATGGCACTGTGCAAACGGCTCTCGAAAACCTTGGTTTGGGAGAAGGAGCAAAACTCAATGCAGCAACGGCTACATTAg                                                              <  1:7322240/93‑1 (MQ=255)
                                caggaatgatgccatttgcttgttatttcttcattttcataaacgTTGGTTTGGGAGAAGGAGCAAAACTCAATGCAGCAACGGCTACATTAg                                                              >  2:8247022‑M1/46‑93 (MQ=255)
                                caggaatgatgccatttgcttgttatttcttcattttcataaacgTTGGTTTGGGAGAAGGAGCAAAACTCAATGCAGCAACGGCTACATTAg                                                              <  2:505972‑M1/48‑1 (MQ=255)
                                 aggaatgatgccatttgcttgttatttcttcattttcataaacgTTGGTTTGGGAGAAGGAGCAAAACTCAATGCAGCAACGGCTACATTAgg                                                             <  2:5962899‑M1/49‑1 (MQ=255)
                                 aggaatgatgccatttgcttgttatttcttcattttcataaacgTTGGTTTGGGAGAAGGAGCAAAACTCAATGCAGCAACGGCTACATTAgg                                                             <  2:9948561‑M1/49‑1 (MQ=255)
                                  gATATCAAATCGGATGGCACTGTGCAAACGGCTCTCGAAAACCTTGGTTTGGGAGAAGGAGCAAAACTCAATGCAGCAACGGCTACATTAGGa                                                            <  2:4648014/93‑1 (MQ=255)
                                   atatCAAATCGGATGGCACTGTGCAAACGGCTCTCGAAAACCTTGGTTTGGGAGAAGGctctgcattacctgttggtgtcccggttccgtggc                                                           <  1:6826287‑M1/93‑36 (MQ=255)
                                    tatCAAATCGGATGGCACTGTGCAAACGGCTCTCGAAAACCTTGGTTTGGGAGAAGGctctgcattacctgttggtgtcccggttccgtggcc                                                          >  1:2038225‑M1/1‑57 (MQ=255)
                                    aatgatgccatttgcttgttatttcttcattttcataaacgTTGGTTTGGGAGAAGGAGCAAAACTCAATGCAGCAACGGCTACATTAGGACg                                                          <  1:5724267‑M1/52‑1 (MQ=255)
                                      tCAAATCGGATGGCACTGTGCAAACGGCTCTCGAAAACCTTGGTTTGGGAGAATGctctgcattgcctgttggtgtcccggttccgtggcctt                                                        <  1:5107644‑M1/93‑39 (MQ=255)
                                        aaaTCGGATGGCACTGTGCAAACGGCTCTCGAAAACCTTGGTTTGGGAGAAGGAGCAAAACTCAATGCAGCAACGGCTACATTAGGACGCAcc                                                      <  2:1151965/93‑1 (MQ=255)
                                         tgccatttgcttgttatttcttcattttcataaacgTTGGTTTGGGAGAAGGAGCAAAACTCAATGCAGCAACGGCTACATTAGGACGCACCg                                                     >  2:7107880‑M1/37‑93 (MQ=255)
                                         tgccatttgcttgttatttcttcattttcataaacgTTGGTTTGGGAGAAGGAGCAAAACTCAATGCAGCAACGGCTACATTAGGACGCACCg                                                     <  1:1864024‑M1/57‑1 (MQ=255)
                                          aTCGGATGGCACTGTGCAAACGGCTCTCGAAAACCTTGGTTTGGGAGAAGGAGCAAAACTCAATGCAGCAACGGCTACATTAGGACGCACCgg                                                    <  2:4836591/93‑1 (MQ=255)
                                             ggATGGCACTGTGCAAACGGCTCTCGAAAACCTTGGTTTGGGAGAAGGAGCAAAACTCAATGCAGCAACGGCTACATTAGGACGCACCGGttt                                                 >  2:5574753/1‑93 (MQ=255)
                                             atttgcttgttatttcttcattttcataaacgTTGGTTTGGGAGAAGGAGCAAAACTCAATGCAGCAACGGCTACATTAGGACGCACCGGttt                                                 <  1:6562803‑M1/61‑1 (MQ=255)
                                              tttgcttgttatttcttcattttcataaacgTTGGTTTGGGAGAAGGAGCAAAACTCAATGCAGCAACGGCTACATTAGGACGCACCGGTTTc                                                <  2:2322148‑M1/62‑1 (MQ=255)
                                               aTGGCACTGTGCAAACGGCTCTCGAAAACCTTGGTTTGGGAGAAGGAGCAAAACTCAATGCAGCAACGGCTACATTAGGACGCACCGGTTTCa                                               <  1:9699566/93‑1 (MQ=255)
                                                tGGCACTGTGCAAACGGCTCTCGAAAACCTTGGTTTGGGAGAAGGAGCAAAACTCAATGCAGCAACGGCTACATTAGGACGCACCGGTTTCAt                                              <  1:1538431/93‑1 (MQ=255)
                                                aggaaCTGTCCAAACGGCTCTCGAAAACCTTGGTGTTGGAGAAGGAGCAAAACTCAATGCAGCAACGGCTACATTAGGACGCACCGGTTTCAt                                              <  1:2878349/89‑1 (MQ=38)
                                                 ggCACTGTGCAAACGGCTCTCGAAAACCTTGGTTTGGGAGAAGGAGCAAAACTCAATGCAGCAACGGCTACATTAGGACGCACCGGTTTCATa                                             <  1:8649636/93‑1 (MQ=255)
                                                  cttgttatttcttcattttcataaacgTTGGTTTGGGAGAAGGAGCAAAACTCAATGCAGCAACGGCTACATTAGGACGCACCGGTTTCATAg                                            >  1:7850691‑M1/28‑93 (MQ=255)
                                                   cgcTGTGCAAACGGCTCTCGAAAACCTTGGTTTGGGAGAAGGAGCAAAACTCAATGCAGCAACGGCTACATTAGGACGCACCGGTTTCATAGc                                           <  2:520059/91‑1 (MQ=255)
                                                   cACTGTGCAAACGGCTCTCGAAAACCTTGGTTTGGGAGAAGGAGCAAAACTCAATGCAGCAACGGCTACATTAGGACGCACCGGTTTCATAGc                                           <  2:4561236/93‑1 (MQ=255)
                                                    aCTGTGCAAACGGCTCTCGAAAACCTTGGTTTGGGAGAAGGctctgcattacctgttggtgtcccggttccgtggccttcagccactccgcca                                          >  1:7986576‑M1/1‑41 (MQ=255)
                                                     gttatttcttcattttcataaacgTTGGTTTGGGAGAAGGAGCAAAACTCAATGCAGCAACGGCTACATTAGGACGCACCGGTTTCATAGCta                                         >  1:3667577‑M1/25‑93 (MQ=255)
                                                     cTGTGCAAACGGCTCTCGAAAACCTTGGTTTGGGAGAAGGctctgcattacctgttggtgtcccggttccgtggccttcagccactccgccaa                                         <  2:319163‑M1/93‑54 (MQ=255)
                                                     cTGTGCAAACGGCTCTCGAAAACCTTGGTTTGGGAGAAGGAGCAAAACTCAATGCAGCAACGGCTACATTAGGACGCACCGGTTTCATAGCta                                         <  1:2375936/93‑1 (MQ=255)
                                                      ttatttcttcattttcataaacgTTGGTTTGGGAGAAGGAGCAAAACTCAATGCAGCAACGGCTACATTAGGACGCACCGGTTTCATAGCtat                                        <  2:8672789‑M1/70‑1 (MQ=255)
                                                      tgtgCAAACGGCTCTCGAAAACCTTGGTTTGGGAGAAGGctctgcattacctgttggtgtcccggttccgtggccttcagccactccgccaac                                        >  1:3989037‑M1/1‑39 (MQ=255)
                                                       tatttcttcattttcataaacgTTGGTTTGGGAGAAGGAGCAAAACTCAATGCAGCAACGGCTACATTAGGACGCACCGGTTTCATAGCtata                                       <  2:614905‑M1/71‑1 (MQ=255)
                                                       gtgCAAACGGCTCTCGAAAACCTTGGTTTGGGAGAAGGAGCAAAACTCAATGCAGCAACGGCTACATTAGGACGCACCGGTTTCATAGCtata                                       >  1:7023594/1‑93 (MQ=255)
                                                       gtgCAAACGGCTCTCGAAAACCTTGGTTTGGGAGAAGGAGCAAAACTCAATGCAGCAACGGCTACATTAGGACGCACCGGTTTCATAGCtata                                       <  2:8918941/93‑1 (MQ=255)
                                                        tgCAAACGGCTCTCGAAAACCTTGGTTTGGGAGAAGGAGCAAAACTCAATGCAGCAACGGCTACATTAGGACGCACCGGTTTCATAGCTATAc                                      <  1:7407259/93‑1 (MQ=255)
                                                        atttcttcattttcataaacgTTGGTTTGGGAGAAGGAGCAAAACTCAATGCAGCAACGGCTACATTAGGACGCACCGGTTTCATAGCTATAc                                      >  1:1172554‑M1/22‑93 (MQ=255)
                                                         tttcttcattttcataagcgTGGGTTTGGGAGAAGGATCAAAACTCAATGCAGCAACGGCTACATTAGGACGCACCGGTTTCATAGCTATAcc                                     >  2:7007377‑M1/21‑93 (MQ=255)
                                                           aaaCGGCTCTCGAAAACCTTGGTTTGGGAGAAGGctctgcattacctgttggtgtcccggttccgtggccttcagccactccgccaacaggct                                   <  2:7190030‑M1/93‑60 (MQ=255)
                                                            aaCGGCTCTCGAAAACCTTGGTTTGGGAGAAGGctctgcattacctgttggtgtcccggttccgtggccttcagccactccgccaacaggctg                                  >  2:3652359‑M1/1‑33 (MQ=255)
                                                             ttcatttttataaacgTTGGTTTGGGAGAAGGAGCAAAACTCAATGCAGCAACGGCTACATTAGGACGCACCGGTTTCATAGCTATACCGGtt                                 >  2:5849369‑M1/17‑93 (MQ=255)
                                                               ggCTCTCGAAAACCTTGGTTTGGGAGAAGGctctgcattacctgttggtgtcccggttccgtggccttcagccactccgccaacaggctggct                               >  1:3370940‑M1/1‑30 (MQ=255)
                                                                 ttttcataaacgTTGGTTTGGGAGAAGGAGCAAAACTCAATGCAGCAACGGCTACATTAGGACGCACCGGTTTCATAGCTATACCGGTTATGa                             >  1:8899042‑M1/13‑93 (MQ=255)
                                                                  tttcataaacgTTGGTTTGGGAGAAGGAGCAAAACTCAATGCAGCAACGGCTACATTAGGACGCACCGGTTTCATAGCTATACCGGTTATGAt                            >  2:9087024‑M1/12‑93 (MQ=255)
                                                                   ctcGAAAACCTTGGTTTGGGAGAAGGctctgcattacctgttggtgtcccggttccgtggccttcagccactccgccaacaggctggctgaaa                           <  2:2482846‑M1/93‑68 (MQ=255)
                                                                   ctcGAAAACCTTGGTTTGGGAGAAGGctctgcattacctgttggtgtcccggttccgtggccttcagccactccgccaacaggctggctgaaa                           <  1:7221233‑M1/93‑68 (MQ=255)
                                                                    tcataaacgTTGGTTTGGGAGAAGGAGCAAAACTCAATGCAGCAACGGCTACATTAGGACCCACCGGTTTCAGAGCTATTCCGGTTATGATtg                          >  2:9826782‑M1/10‑93 (MQ=255)
                                                                    tcGAAAACCTTGGTTTGGGAGAAGGAGCAAAACTCAATGCAGCAACGGCTACATTAGGACGCACCGGTTTCATAGCTATACCGGTTATGATtg                          >  2:3991174/1‑93 (MQ=255)
                                                                    tcGAAAACCTTGGTTTGGGAGAAGGAGCAAAACTAAATGCAGCAACGGCTACATTAGGACGCACCGGTTTCATAGCTATACCGGTTATGATtg                          >  1:3867406/1‑93 (MQ=255)
                                                                     cataaacgTTGGTTTGGGAGAAGGAGCAAAACTCAATGCAGCAACGGCTACATTAGGACGCACCGGTTTCATAGCTATACCGGTTATGATtgg                         <  1:8560325‑M1/85‑1 (MQ=255)
                                                                      gAAAACCTTGGTTTGGGAGAAGGAGCAAAACTCAATGCAGCAACGGCTACATTAGGACGCACCGGTTTCATAGCTATACCGGTTATGATtggt                        >  2:7607081/1‑93 (MQ=255)
                                                                       aaaaCCTTGGTTTGGGAGAAGGAGCAAAACTCAATGCAGCAACGGCTACATTAGGACGCACCGGTTTCATAGCTATACCGGTTATGATtggtg                       >  2:1237000/1‑93 (MQ=255)
                                                                        aaacgTTGGTTTGGGAGAAGGAGCAAAACTCAATGCAGCAACGGCTACATTAGGACGCACCGGTTTCATAGCTATACCGGTTATGATtggtgg                      <  2:6917856‑M1/88‑1 (MQ=255)
                                                                        aaaCCTTGGTTTGGGAGAAGGcactgcattacctgtcggtgtcccggttccgtggccttcagccactccgccaacaggctggcagaaatgcaa                      <  2:942468‑M1/93‑73 (MQ=255)
                                                                          acgTTGGTTTGGGAGAAGGAGCAAAACTCAATGCAGCAACGGCTACATTAGGACGCACCGGTTTCATAGCTATACCGGTTATGATTGGTGGTa                    >  1:7678430‑M1/4‑93 (MQ=255)
                                                                            gTTGGTTTGGGAGAAGGAGCAAAACTCAATGCAGCAACGGCTACATTAGGACGCACCGGTTTCATAGCTATACCGGTTATGATTGGTGGTAtt                  <  1:66999‑M1/92‑1 (MQ=255)
                                                                             TTGGTTTGGGAGAAGGAGCAAAACTCAATGCAGCAACGGCTACATTAGGACGCACCGGTTTCATAGCTATACCGGTTATGATTGGTGGTATTg                 <  2:2184095‑M1/93‑1 (MQ=255)
                                                                              TGGTTTGGGAGAAGGAGCAAAACTCAATGCAGCAACGGCTACATTAGGACGCACCGGTTTCATAGCTATACCGGTTATGATTGGTGGTATTGa                >  2:540276‑M1/1‑93 (MQ=255)
                                                                               GGTTTGGGAGAAGGAGCAAAACTCAATGCAGCAACGGCTACATTAGGACGCACCGGTTTCATAGCTATACCGGTTATGATTGGTGGTATTGAg               <  1:2206945‑M1/93‑1 (MQ=255)
                                                                                  TTGGGAGAAGGAGCAAAACTCAATGCAGCAACGGCTACATTAGGACGCACCGGTTTCATAGCTATACCGGTTATGATTGGTGGTATTGAGCaa            >  1:10021883‑M1/1‑93 (MQ=255)
                                                                                  TTGGGAGAAGGAGCAAAACTCAATGCAGCAACGGCTACATTAGGACGCACCGGTTTCATAGCTATACCGGTTATGATTGGTGGTATTGAGCaa            >  2:1014848‑M1/1‑93 (MQ=255)
                                                                                   TGGGAGAAGGAGCAAAACTCAATGCAGCAACGGCTACATTAGGACGCACCGGTTTCATAGCTATACCGGTTATGATTGGTGGTATTGAGCAAt           >  2:9609279‑M1/1‑93 (MQ=255)
                                                                                     GGAGAAGGAGCAAAACTCAATGCAGCAACGGCTACATTAGGACGCACCGGTTTCATAGCTATACCGGTTATGATTGGTGGTATTGAGCAATCa         <  1:9081857‑M1/93‑1 (MQ=255)
                                                                                       agaAGGctctgcattacctgttggtgtcccggttccgtggccttcagccactccgccaacaggctggctgaaatgcaatggtgccgctttttc       <  2:630441‑M1/93‑88 (MQ=255)
                                                                                       agaAGGctctgcattacctgttggtgtcccggttccgtggccttcagccactccgccaacaggctggctgaaatgcaatggtgccgctttttc       >  1:3089141‑M1/1‑6 (MQ=255)
                                                                                        GAAGGAGCAAAACTCAATGCAGCAACGGCTACATTAGGACGCACCGGTTTCATAGCTATACCGGTTATGATTGGTGGTATTGAGCAATCAGTa      <  1:5893466‑M1/93‑1 (MQ=255)
                                                                                        GAAGGAGCAAAACTCAATGCAGCAACGGCTACATTAGGACGCACCGGTTTCATAGCTATACCGGTTATGATTGGTGGTATTGAGCAATCAGTa      >  2:2938147‑M1/1‑93 (MQ=255)
                                                                                         AAGGAGCAAAACTCAATGCAGCAACGGCTACATTAGGACGCACCGGTTTCATAGCTATACCGGTTATGATTGGTGGTATTGAGCAATCAGTaa     >  2:3345458‑M1/1‑93 (MQ=255)
                                                                                          aGGctctgcattacctgttggtgtcccggttccgtggccttcagccactccgccaacaggctggctgaaatgcaatggtgccgctttttctgc    <  1:494072‑M1/93‑91 (MQ=255)
                                                                                          AGGAGCAAAACTCAATGCAGCAACGGCTACATTAGGACGCACCGGTTTCATAGCTATACCGGTTATGATTGGTGGTATTGAGCAATCAGTAAt    <  2:9725800‑M1/93‑1 (MQ=255)
                                                                                           ggctctgcattacctgttggtgtcccggttccgtggccttcagccactccgccaacaggctggctgcaatgcaatggtgccgctttttctgct   >  1:2558954‑M1/1‑2 (MQ=255)
                                                                                           ggctctgcattacctgttggtgtcccggttccgtggccttcagccactccgccaacaggctggctgaaatgcaatggtgccgctttttctgct   >  2:131695‑M1/1‑2 (MQ=255)
                                                                                           GGAGCAAAACTCAATGCAGCAACGGCTACATTAGGACGCACCGGTTTCATAGCTATACCGGTTATGATTGGTGGTATTGAGCAATCAGTAATc   >  1:7532962‑M1/1‑93 (MQ=255)
                                                                                            GAGCAAAACTCAATGCAGCAACGGCTACATTAGGACGCACCGGTTTCATAGCTATACCGGTTATGATTGGTGGTATTGAGCAATCAGTAATCa  >  1:6335674‑M1/1‑93 (MQ=255)
                                                                                            |                                                                                            
CGCGCTGCTGTTAAGCCGCAAGAATCCGTTTGGCGATATCAAATCGGATGGCACTGTGCAAACGGCTCTCGAAAACCTTGGTTTGGGAGAAGGAGCAAAACTCAATGCAGCAACGGCTACATTAGGACGCACCGGTTTCATAGCTATACCGGTTATGATTGGTGGTATTGAGCAATCAGTAATCA  >  NC_000913/1206936‑1207120

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 20 ≤ ATCG/ATCG < 29 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.