BRESEQ :: Evidence

New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_000913	= 1207028	122 (0.320)	112 (0.350)	71/152	2.2	48.4%	coding (305/630 nt)	ycfK	hypothetical protein
*	?	NC_000913	= 1208825	138 (0.430)	112 (0.350)	71/152	2.2	48.4%	coding (57/540 nt)	b1157	putative tail fiber protein

Only 100 of 287 total aligned reads displayed.

TCAGCAGAAAAAGCGGCACCATTGCATTTCAGCCAGCCTGTTGGCGGAGTGGCTGAAGGCCACGGAACCGGGACACCAACAGGTAATGCAGAGCCTTCTCCCAAACCAACGTTTATGAAAATGAAGAAATAACAAGCAAATGGCATCATTCCTGCTTTTACCAGGGGGATTTAACATGCTTATTG  >  NC_000913/1208733‑1208917

     agAAAAAGCGGCACCATTGCATTTCAGCCAGCCTGTTGGCGGAGTGGCTGAAGGCCACGGAACCGGGACACCAACAGGTAATGCAGAGccttc                                                                                         >  2:1288554‑M2/1‑88 (MQ=255)

      gAAAAAGCGGCACCATTGCATTTCAGCCAGCCTGTTGGCGGAGTGGCTGAAGGCCACGGAACCGGGACACCAACAGGTAATGCAGAGccttct                                                                                        <  2:630441‑M2/93‑7 (MQ=255)

          aaGCGGCACCATTGCATTTCAGCCAGCCTGTTGGCGGAGTGGCTGAAGGCCACGGAACCGGGACACCAACAGGTAATGCACAGccttctccca                                                                                    <  2:8807119‑M2/93‑11 (MQ=255)

            gCGGCACCATTGCATTTCAGCCAGCCTGTTGGCGGAGTGGCTGAAGGCCACGGAACCGGGACACCAACAGGTAATGCAGAGccttctcccaaa                                                                                  <  1:1955995‑M2/93‑13 (MQ=255)

            gCGGCACCATTGCATTTCAGCCAGCCTGTTGGCGGAGTGGCTGAAGGCCACGGAACCGGGACACCAACAGGTAATGCAGAGccttctcccaaa                                                                                  <  2:326676‑M2/93‑13 (MQ=255)

              ggCACCATTGCATTTCAGCCAGCCTGTTGGCGGAGTGGCTGAAGGCCACGGAACCGGGACACCAACAGGTAATGCAGAGccttctcccaaacc                                                                                >  1:9986791‑M2/1‑79 (MQ=255)

                cACCATTGCATTTCAGCCAGCCTGTTGGCGGAGTGGCTGAAGGCCACGGAACCGGGACACCAACAGGTAATGCAGAGccttctcccaaaccaa                                                                              >  2:2682599‑M2/1‑77 (MQ=255)

                 aCCATTGCATTTCAGCCAGCCTGTTGGCGGAGTGGCTGAAGGCCACGGAACCGGGACACCAACAGGTAATGCAGAGCCTTCTCCCAAACCAAc                                                                             <  2:1163113/93‑1 (MQ=255)

                 aCCATTGCATTTCAGCCAGCCTGTTGGCGGAGTGGCTGAAGGCCACGGAACCGGGACACCAACAGGTAATGCAGAGCCTTCTCCCAAACCAAc                                                                             >  2:8215450/1‑93 (MQ=255)

                  ccATTGCATTTCAGCCAGCCTGTTGGCGGAGTGGCTGAAGGCCACGGAACCGGGACACCAACAGGTAATGCAGAGccttctcccaaaccaagg                                                                            >  2:4827791‑M2/1‑75 (MQ=255)

                  ccATTGCATTTCAGCCAGCCTGTTGGCGGAGTGGCTGAAGGCCACGGAACCGGGACACCAACAGGTAATGCAGAGCCTTCTCCCAAACCAACg                                                                            >  2:8549561/1‑93 (MQ=255)

                   cATTGCATTTCAGCCAGCCTGTTGGCGGCGTGGCTGAAGGCCACGGAACCGGGACACCAACAGGGAATGCAGAGCCTTCTACCAAACCAACGt                                                                           >  2:6719569/1‑93 (MQ=255)

                   cATTGCATTTCAGCCAGCCTGTTGGCGGAGTGGCTGAAGGCCACGGAACCGGGACACCAACAGGTAATGCAGAGccttctcccaaaccaaggt                                                                           <  1:1048747‑M2/93‑20 (MQ=255)

                    aTTGCATTTCAGCCAGCCTGTTGGCGGAGTGGCTGAAGGCCACGGAACCGGGACACCAACAGGTAATGCAGAGCCTTCTCCCAAACCAACGtt                                                                          <  1:9511335/93‑1 (MQ=255)

                    aTTGCATTTCAGCCAGCCTGTTGGCGGAGTGGCTGAAGGCCACGGAACCGGGACACCAACAGGTAATGCAGAGCCTTCTCCCAAACCAACGtt                                                                          >  2:3154203/1‑93 (MQ=255)

                     ttGCATTTCAGCCAGCCTGTTGGCGGGGTGGCTGAAGGCCACGGAACCGGGACACCAACAGGTAATGCAGAGccttctcccaaaccaaggttt                                                                         >  1:3939599‑M2/1‑72 (MQ=255)

                     ttGCATTTCAGCCAGCCTGTTGGCGGAGTGGCTGAAGGCCACGGAACCGGGACACCAACAGGTAATGCAGAGccttctcccaaaccaaggttt                                                                         >  2:6696623‑M2/1‑72 (MQ=255)

                     ttGCATTTCAGCCAGCCTGTTGGCGGAGTGGCTGAAGGCCACGGAACCGGGACACCAACAGGTAATGCAGAGCCTTCTCCCAAACCAACGttt                                                                         >  2:3621395/1‑93 (MQ=255)

                     atgCATTTCAGCCAGCCTGTTGGCGGGGTGGCTGAAGGCCACGGAACCGGGACTCCAACAGGTAATGCAGAGccttctcccaaaccaaggttt                                                                         >  1:7516927‑M2/2‑72 (MQ=255)

                      tGCATTTCAGCCAGCCTGTTGGCGGAGTGGCTGAAGGCCACGGAACCGGGACACCAACAGGTAATGCAGAGccttctcccaaaccaaggtttt                                                                        >  2:1125411‑M2/1‑71 (MQ=255)

                        cATTTCAGCCAGCCTGTTGGCGGAGTGGCTGAAGGCCACGGAACCGGGACACCAACAGGTAATGCAGAGccttctcccaaaccaaggttttcg                                                                      <  1:971503‑M2/93‑25 (MQ=255)

                        cATTTCAGCCAGCCTGTTGGCGGAGTGGCTGAAGGCCACGGAACCGGGACACCAACAGGTAATGCAGAGCCTTCTCCCAAACCAACGTTTATg                                                                      <  2:5913062/93‑1 (MQ=255)

                         aTTTCAGCCAGCCTGTTGGCGGAGTGGCTGAAGGCCACGGAACCGGGACACCAACAGGTAATGCAGAGccttctcccaaaccaaggttttcga                                                                     >  2:8164886‑M2/1‑68 (MQ=255)

                          tttCAGCCAGCCTGTTGGCGGAGTGGCTGAAGGCCACGGAACCGGGACACCAACAGGTAATGCAGAGccttctcccaaaccaaggttttcgag                                                                    <  2:2482846‑M2/93‑27 (MQ=255)

                          tttCAGCCAGCCTGTTGGCGGAGTGGCTGAAGGCCACGGAACCGGGACACCAACAGGTAATGCAGAGccttctcccaaaccaaggttttcgag                                                                    <  1:7221233‑M2/93‑27 (MQ=255)

                          tttCAGCCAGCCTGTTGGCGGAGTGGCTGAAGGCCACGGAACCGGGACACCAACAGGTAATGCAGAGccttctcccaaaccaaggttttcgag                                                                    <  2:4702497‑M2/93‑27 (MQ=255)

                          tttCAGCCAGCCTGTTGGCGGAGTGGCTGAAGGCCACGGAACCGGGACACCAACAGGTAATGCAGAGCCTTCTCCCAAACCAACGTTTATGaa                                                                    >  2:6222563/1‑93 (MQ=255)

                           ttCAGCCAGCCTGTTGGCGGAGTGGCTGAAGGCCACGGAACCGGGACACCAACAGGTAATGCAGAGccttctcccaaaccaaggttttcgaga                                                                   >  2:138022‑M2/1‑66 (MQ=255)

                            tCAGCCAGCCTGTTGGCGGAGTGGCTGAAGGCCACGGAACCGGGACACCAACAGGTAATGCAGAGCCTTCTCCCAAACCAACGTTTATGaaaa                                                                  <  2:5115487/93‑1 (MQ=255)

                            tCAGCCAGCCTGTGGGCGTAGTGGCTGAAGGCCACGGAACCGGGACACCAACAGGTAATGCAGAGCCTTCTCCCAAACCAACGTTCATGaaaa                                                                  <  2:3792055/93‑1 (MQ=255)

                              agccagccTGTTGGCGGAGTGGCTGAAGGCCACGGAACCGGGACACCAACAGGTAATGCAGAGccttctcccaaaccaaggttttcgagagcc                                                                >  1:3370940‑M2/1‑63 (MQ=255)

                               gccagccTGTTGGCGGAGTGGCTGAAGGCCACGGCACCGGGACACCAACAGGTAATGCAGAGCCTTCTCCCAAACCAACGTTTATGAAAATga                                                               >  1:4387238/1‑93 (MQ=255)

                               gccagccTGTTGGCGGAGTGGCTGAAGGCCACGGAACCGGGACACCAACAGGTAATGCAGAGccttctcccaaaccaaggttttcgagagccg                                                               <  1:2547057‑M2/93‑32 (MQ=255)

                               gccagccTGTTGGCGGAGTGGCTGAAGGCCACGGAACCGGGACACCAACAGGTAATGCAGAGccttctcccaaaccaaggttttcgagagccg                                                               <  1:5469089‑M2/93‑32 (MQ=255)

                               gccagccTGTTGGCGGAGTGGCTGAAGGCCACGGAACCGGGACACCAACAGGTAATGCAGAGCCTTCTCCCAAACCAACGTTTATGAAAATga                                                               <  1:2859657/93‑1 (MQ=255)

                                ccagccTGTTGGCGGAGTGGCTGAAGGCCACGGAACCGGGACACCAACAGGTAATGCAGAGCCTTCTCCCAAACCAACGTTTATGAAAATgaa                                                              >  2:1236085/1‑93 (MQ=255)

                                ccagccTGTTGGCGGAGTGGCTGAAGGCCACGGAACCGGGACACCAACAGGTAATGCAGAGCCTTCTCCCAAACCAACGTTTATGAAAATgaa                                                              <  1:158862/93‑1 (MQ=255)

                                 cagccTGTTGGCGGAGTGGCTGAAGGCCACGGAACCGGGACACCAACAGGTAATGCAGAGccttctcccaaaccaaggttttcgagagccgtt                                                             >  2:4596461‑M2/1‑60 (MQ=255)

                                 cagccTGTTGGCGGAGTGGCTGAAGGCCACGGAACCGGGACACCAACAGGTAATGCAGAGccttctcccaaaccaaggttttcgagagccgtt                                                             >  2:8035759‑M2/1‑60 (MQ=255)

                                  agccTGTTGGCGGAGTTGGTGAAGGCCACGGAACCGGGACACCAACAGGTAATGCAGAGcgttctcccaaaccaaggttttcgagagccgttt                                                            >  2:3920674‑M2/1‑59 (MQ=255)

                                   gccTGTTGGCGGAGTGGCTGAAGGCCACGGAACCGGGACACCAACAGGTAATGCAGAGccttctcccaaaccaaggttttcgagagccgtttg                                                           <  2:5214116‑M2/93‑36 (MQ=255)

                                   gccTGTTGGCGGAGTGGCTGAAGGCCACGGAACCGGGACACCAACAGGTAATGCAGAGCCTTCTCCCAAACCAACGTTTATGAAAATgaagaa                                                           <  1:6105099/93‑1 (MQ=255)

                                    ccTGTTGGCGGAGTGGCTGAAGGCCACGGAACCGGGACACCAACAGGTAATGCAGAGccttctcccaaaccaaggttttcgagagccgtttgc                                                          <  1:405287‑M2/93‑37 (MQ=255)

                                    ccTGTTGGCGGAGTGGCTGAAGGCCACGGAACCGGGACACCAACAGGTAATGCAGAGCCTTCTCCCAAACCAACGTTTATGAAAATGAAGaaa                                                          >  2:1692972/1‑93 (MQ=255)

                                              gAGTGGCTGAAGGCCACGGAACCGGGACACCAACAGGTAATGCAGAGCCTTCTCCCAAACCAACGTTTATGAAAATGAAGAAATAACAAGCaa                                                >  1:5111367/1‑93 (MQ=255)

                                              gAGTGGCTGAAGGCCACGGAACCGGGACACCAACAGGTAATGCAGAGCCTTCTCCCAAACCAACGTTTATGAAAATGAAGAAATAACAAGCaa                                                <  1:9075300/93‑1 (MQ=255)

                                              gAGTGGCTGAAGGCCACGGAACCGGGACACCAACAGGTAATGCAGAGCCTTCTCCCAAACCAACGTTTATGAAAATGAAGAAATAACAAGCaa                                                >  1:65397/1‑93 (MQ=255)

                                               aGTGGCTGAAGGCCACGGAACCGGGACACCAACAGGTAATGCAGAGCCTTCTCCCAAACCAACGTTTATGAAAATGAAGAAATAACAAGCaaa                                               <  1:3154606/93‑1 (MQ=255)

                                               aGTGGCTGAAGGCCACGGAACCGGGACACCAACAGGTAATGCAGAGCCTTCTCCCAAACCAACGTTTATGAAAATGAAGAAATAACAAGCaaa                                               <  1:6958740/93‑1 (MQ=255)

                                                gTGGCTGAAGGCCACGGAACCGGGACACCAACAGGTAATGCAGAGCCTTCTCCCAAACCAACGTTTATGAAAATGAAGAAATAACAAGCAAAt                                              <  2:737288/93‑1 (MQ=255)

                                                 tGGCTGAAGGCCACGGAACCGGGACACCAACAGGTAATGCAGAGccttctcccaaaccaaggttttcgagagccgtttgcacagtgccatccg                                             <  1:8147368‑M2/93‑50 (MQ=255)

                                                 tGGCTGAAGGCCACGGAACCGGGACACCAACAGGTAATGCAGAGCCTTCTCCCAAACCAACGTTTATGAAAATGAAGAAATAACAAGCAAATg                                             <  1:7621175/93‑1 (MQ=255)

                                                  ggCTGAAGGCCACGGAACCGGGACACCAACAGGTAATGCAGAGCCTTCTCCCAAACCAACGTTTATGAAAATGAAGAAATAACAAGCAAATgg                                            <  1:1642290/93‑1 (MQ=255)

                                                     tGAAGGCCACGGAACCGGGACACCAACAGGTAATGCAGAGCCTTCTCCCAAACCAACGTTTATGAAAATGAAGAAATAACAAGCAAATGGcat                                         >  2:2291349/1‑93 (MQ=255)

                                                     tGAAGGCCACGGAACCGGGACACCAACAGGTAATGCAGAGCCTTCTCCCAAACCAACGTTTATGAAAATGAAGAAATAACAAGCAAATGGcat                                         >  2:9762416/1‑93 (MQ=255)

                                                       aaGGCCACGGAACCGGGACACCAACAGGTAATGCAGAGCCTTCTCCCAAACCAACGTTTATGAAAATGAAGAAATAACAAGCAAATGGcatca                                       <  2:780903/93‑1 (MQ=255)

                                                       aaGGCCACGGAACCGGGACACCAACAGGTAATGCAGAGCCTTCTCCCAAACCAACGTTTATGAAAATGAAGAAATAACAAGCAAATGGcatca                                       <  1:4512064/93‑1 (MQ=255)

                                                          gCCACGGAACCGGGACACCAACAGGTAATGCAGAGccttctcccaaaccaaggttttcgagagccgtttgcacagtgccatccgatttgatat                                    <  1:6826287‑M2/93‑59 (MQ=255)

                                                          gCCACGGAACCGGGACACCAACAGGTAATGCAGAGCCTTCTCCCAAACCAACGTTTATGAAAATGAAGAAATAACAAGCAAATGGCATCATTc                                    <  1:4736620/93‑1 (MQ=255)

                                                           ccACGGAACCGGGACACCAACAGGTAATGCAGAGCCTTCTCCCAAACCAACGTTTATGAAAATGAAGAAATAACAAGCAAATGGCATCATTcc                                   >  1:2057452/1‑93 (MQ=255)

                                                             aCGGAACCGGGACACCAACAGGTAATGCAGAGccttctcccaaaccaaggttttcgagagccgtttgcacagtgccatccgatttgatatcgc                                 <  1:225437‑M2/93‑62 (MQ=255)

                                                              cGGAACCGGGACACCAACAGGTAATGCAGAGCCTTCTCCCAAACCAACGTTTATGAAAATGAAGAAATAACAAGCAAATGGCATCATTCCTGc                                >  2:6535208/1‑93 (MQ=255)

                                                                 aaCCGGGACACCAACAGGTAATGCATAGCCTTCTCCCAAACCAACGTTGATGAAAAGGAAGAAATAACAAGCAAATGGCATCATTCCTGCttt                             <  2:4879181/93‑1 (MQ=255)

                                                                 aaCCGGGACACCAACAGGTAATGCAGAGCCTTCTCCCAAACCAACGTTTATGAAAATGAAGAAATAACAAGCAAATGGCATCATTCCTGCttt                             <  1:840365/93‑1 (MQ=255)

                                                                  aCCGGGACACCAACAGGTAATGCAGAGccttctcccaaaccaaggttttcgagagccgtttgcacagtgccatccgatttgatatcgccaaac                            >  1:5701059‑M2/1‑27 (MQ=255)

                                                                  aCCGGGACACCAACAGGGAATGCAGAGccttctcccaaaccaaggttttcgagagccgtttgcacagtgccatccgatttgatatcgccaaac                            <  1:9941979‑M2/93‑67 (MQ=255)

                                                                   ccGGGACACCAACAGGTAATGCAGAGccttctcccaaaccaaggttttcgagagccgtttgcacagtgccatccgatttgatatcgccaaacg                           <  1:7764116‑M2/93‑68 (MQ=255)

                                                                     gggACACCAACAGGTAATGCAGAGCCTTCTCCCAAACCAACGTTTATGAAAATGAAGAAATAACAAGCAAATGGCATCATTCCTGCTTTTAcc                         >  2:752453/1‑93 (MQ=255)

                                                                     gggACACCAACAGGTAATGCAGAGCCTTCTCCCAAACCAACGTTTATGAAAATGAAGAAATAACAAGCAAATGGCATCATTCCTGCTTTTAcc                         <  1:618938/93‑1 (MQ=255)

                                                                      ggACACCAACAGGTAATGCAGAGccttctcccaaaccaaggttttcgagagccgtttgcacagtgccatccgatttgatatcgccaaacggat                        >  1:7327368‑M2/1‑23 (MQ=255)

                                                                       gACACCAACAGGTAATGCAGAGCCTTCTCCCAAACCAACGTTTATGAAAATGAAGAAATAACAAGCAAATGGCATCATTCCTGCTTTTACCAg                       <  1:1296711/93‑1 (MQ=255)

                                                                        acacCAACAGGTAATGCAGAGccttctcccaaaccaaggttttcgagagccgtttgcacagtgccatccgatttgatatcgccaaacggattc                      >  2:6153062‑M2/1‑21 (MQ=255)

                                                                        acacCAACAGGTAATGCAGAGccttctcccaaaccaaggttttcgagagccgtttgcacagtgccatccgatttgatatcgccaaacggattc                      <  2:5515890‑M2/93‑73 (MQ=255)

                                                                        acacCAACAGGTAATGCAGAGCCTTCTCCCAAACCAACGTTTATGAAAATGAAGAAATAACAAGCAAATGGCATCATTCCTGCTTTTACCAgg                      <  2:3238155/93‑1 (MQ=255)

                                                                          acCAACAGGTAATGCAGAGccttctcccaaaccaaggttttcgagagccgtttgcacagtgccatccgatttgatatcgccaaacggattctt                    >  1:5020684‑M2/1‑19 (MQ=255)

                                                                          acCAACAGGTAATGCAGAGCCTTCTCCCAAACCAACGTTTATGAAAATGAAGAAATAACAAGCAAATGGCATCATTCCTGCTTTTACCAgggg                    <  2:1775504/93‑1 (MQ=255)

                                                                           ccAACAGGTAATGCAGAGCCTTCTCCCAAACCAACGTTTATGAAAATGAAGAAATAACAAGCAAATGGCATCATTCCTGGTTTTACCAggggg                   >  1:4121056/1‑93 (MQ=255)

                                                                           ccAACAGGTAATGCAGAGCCTTCTCCCAAACCAACGTTTATGAAAATGAAGAAATAACAAGCAAATGGCATCATTCCTGCTTTTACCAggggg                   <  1:7873476/93‑1 (MQ=255)

                                                                            cAACAGGTAATGCAGAGccttctcccaaaccaaggttttcgagagccgtttgcacagtgccatccgatttgatatcgccaaacggattcttgc                  >  1:3037691‑M2/1‑17 (MQ=255)

                                                                            cAACAGGGAATGCAGAGaattctcccacaccaaggttttcgagagccgtttgcacagtgccatccgatttgatatcgccacacggattcttgc                  <  2:3500892‑M2/93‑77 (MQ=255)

                                                                             aaCAGGTAATGCAGAGccttctcccaaaccaaggttttcgagagccgtttgcacagtgccatccgatttgatatcgccaaacggattcttgcg                 <  2:580521‑M2/93‑78 (MQ=255)

                                                                             aaCAGGTAATGCAGAGccttctcccaaaccaaggttttcgagagccgtttgcacagtgccatccgatttgatatcgccaaacggattcttgcg                 <  1:5291920‑M2/93‑78 (MQ=255)

                                                                             aaCAGGTAATGCAGAGCCTTCTCCCAAACCAACGTTTATGAAAATGAAGAAATAACAAGCAAATGGCATCATTCCTGCTTTTACCAGGGGGAt                 <  1:5057082/93‑1 (MQ=255)

                                                                              aCAGGTAATGCAGAGccttctcccaaaccaaggttttcgagagccgtttgcacagtgccatccgatttgatatcgccaaacggattcttgcgg                <  1:3505242‑M2/93‑79 (MQ=255)

                                                                               cAGGTAATGCAGAGccttctcccaaaccaaggttttcgagagccgtttgcacagtgccatccgatttgatatcgccaaacggattcttgcggc               <  1:8106577‑M2/93‑80 (MQ=255)

                                                                               cAGGTAATGCAGAGccttctcccaaaccaaggttttcgagagccgtttgcacagtgccatccgatttgatatcgccaaacggattcttgcggc               <  1:87650‑M2/93‑80 (MQ=255)

                                                                                 ggTAATGCAGAGccttctcccaaaccaaggttttcgagagccgtttgcacagtgccatccgatttgatatcgccaaacggattcttgcggctt             >  2:8276496‑M2/1‑12 (MQ=255)

                                                                                  gTAATGCAGAGccttctcccaaaccaaggttttcgagagccgtttgcacagtgccatccgatttgatatcgccaaacggattcttgcggctta            >  2:942813‑M2/1‑11 (MQ=255)

                                                                                   tAATGCAGAGCCTTCTCCCAAACCAACGTTTATGAAAATGAAGAAATAACAAGCAAATGGCATCATTCCTGCTTTTACCAGGGGGATTTAACa           <  2:4834962/93‑1 (MQ=255)

                                                                                      tGCAGAGccttctcccaaaccaaggttttcgagagccgtttgcacagtgccatccgatttgatatcgccaaacggattcttgcggcttaacag        <  2:7828104‑M2/93‑87 (MQ=255)

                                                                                         agagCCTTCTCCCAAACCAACGTTTATGAAAATGAAGAAATAACAAGCAAATGGCATCATTCCTGCTTTTACCAGGGGGATTTAACATGCTTa     >  1:8291410/1‑93 (MQ=255)

                                                                                         agagCCTTCTCCCAAACCAACGTTTATGAAAATGAAGAAATAACAAGCAAATGGCATCATTCCTGCTTTTACCAGGGGGATTTAACATGCTTa     >  1:2723509/1‑93 (MQ=255)

                                                                                         agagCCTTCTCCCAAACCAACGTTTATGAAAATGAAGAAATAACAAGCAAATGGCATCATTCCTGCTTTTACCAGGGGGATTTAACATGCTTa     <  2:5241010/93‑1 (MQ=255)

                                                                                          gagccttctcccaaaccaaggttttcgagagccgtttgcacagtgccatccgatttgatatcgccaaacggattcttgcggcttaacagcagc    >  2:9033043‑M2/1‑3 (MQ=255)

                                                                                          gagccttctcccaaaccaaggttttcgagagccgtttgcacagtgccatccgatttgatatcgccaaacggattcttgcggcttaacagcagc    >  1:594181‑M2/1‑3 (MQ=255)

                                                                                          gagCCTTCTCCCAAACCAACGTTTATGAAAATGAAGAAATAACAAGCAAATGGCATCATTCCTGCTTTTACCAGGGGGATTTAACATGCTTAt    >  2:704170/1‑93 (MQ=255)

                                                                                          gagCCTTCTCCCAAACCAACGTTTATGAAAATGAAGAAATAACAAGCAAATGGCATCATTCCTGCTTTTACCAGGGGGATTTAACATGCTTAt    <  1:9197971/93‑1 (MQ=255)

                                                                                           agCCTTCTCCCAAACCAACGTTTATGAAAATGAAGAAATAACAAGCAAATGGCATCATTCCTGCTTTTACCAGGGGGATTTAACATGCTTAtt   >  2:4286343/1‑93 (MQ=255)

                                                                                            gCCTTCTCCCAAACCAACGTTTATGAAAATGAAGAAATAACAAGCAAATGGCATCATTCCTGCTTTTACCAGGGGGATTTAACATGCTTATTg  >  2:5431324/1‑93 (MQ=255)

                                                                                            gCCTTCTCCCAAACCAACGTTTATGAAAATGAAGAAATAACAAGCAAATGGCATCATTCCTGCTTTTACCAGGGGGATTTAACATGCTTATTg  <  1:9732460/93‑1 (MQ=255)

TCAGCAGAAAAAGCGGCACCATTGCATTTCAGCCAGCCTGTTGGCGGAGTGGCTGAAGGCCACGGAACCGGGACACCAACAGGTAATGCAGAGCCTTCTCCCAAACCAACGTTTATGAAAATGAAGAAATAACAAGCAAATGGCATCATTCCTGCTTTTACCAGGGGGATTTAACATGCTTATTG  >  NC_000913/1208733‑1208917

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 23 ≤` `ATCG/ATCG` `< 30 ≤` `ATCG/ATCG` `< 35 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.