New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913 269765 =NA (NA)416 (1.080) 147/184 0.2 98.6% coding (300/405 nt) yi91a hypothetical protein
?NC_000913 = 370983 6 (0.020)coding (536/882 nt) mhpC 2‑hydroxy‑6‑ketonona‑2,4‑dienedioic acid hydrolase

Only 100 of 884 total aligned reads displayed.

CATGAGTTTGTTTACGCCGATGCCAACCGAAGGTATTAAGCGACTGAATCAGCTTTATCGTCAGCCGACTATCGAAAACCTGAAGCTGATGATGGATATCTTCGTTTTTGATACCAGCGATTTGACCGACGCCCTGTTTGAAGCGCGCCTGAATAATATGCTGTCGCGCCGCGATCACCTGGAAA  >  NC_000913/370891‑371075
                                                                                            |                                                                                            
cATGAGTTTGTTTACGCCGATGCCAACCGAAGGTATTAAGCGACTGAATCAGCTTTATCGTCAGCCGACTATCGAAAACCTGAAGCTgatgat                                                                                              >  1:2874984/1‑93 (MQ=255)
cATGAGTTTGTTTACGCCGATGCCAACCGAAGGTATTAAGCGACTGAATCAGCTTTATCGTCAGCCGACTATCGAAAACCTGAAGCTgatgat                                                                                              >  2:6765435/1‑93 (MQ=255)
 aTGAGTTTGTTTACGCCGATGCCAACCGAAGGTATTAAGCGACTGAATCAGCTTTATCGTCAGCCGACTATCGAAAACCTGAAGCTGATGATt                                                                                             <  2:2192567‑M2/93‑2 (MQ=255)
  tGAGTTTGTTTACGCCGATGCCAACCGAAGGTATTAAGCGACTGAATCAGCTTTATCGTCAGCCGACTATCGAAAACCTGAAGCTGATGATtg                                                                                            <  2:9415655‑M2/93‑3 (MQ=255)
  tGAGTTTGTTTACGCCGATGCCAACCGAAGGTATTAAGCGACTGAATCAGCTTTATCGTCAGCCGACTATCGAAAACCTGAAGCTGATGATtg                                                                                            <  2:5226309‑M2/93‑3 (MQ=255)
   ctaaacaacagaccgagaaagacactgaagttcaaaacaccgaaagagataattgaaaggggtgttgcattgacagattgaatctacaATGGa                                                                                           >  2:6606758‑M2/89‑93 (MQ=255)
    taaacaacagaccgagaaagacactgaagttcaaaacaccgaaagagataattgaaaggggtgttgcattgacagattgaatctacaATGGat                                                                                          <  2:7258904‑M2/6‑1 (MQ=255)
     aaacaacagaccgagaaagacactgaagttcaaaacaccgaaagagataattgaaaggggtgttgcattgacagattgaatctacaATGGata                                                                                         >  1:5526277‑M2/87‑93 (MQ=255)
     aaacaacagaccgagaaagacactgaagttcaaaacaccgaaagagataattgaaaggggtgttgcattgacagattgaatctacaATGGata                                                                                         <  1:3077812‑M2/7‑1 (MQ=255)
      tttgtttACGCCGATGCCAACCGAAGGTATTAAGCGACTGAATCAGCTTTATCGTCAGCCGACTATCGAAAACCTGAAGCTGATGATtgtaga                                                                                        <  1:9395928‑M2/93‑7 (MQ=255)
       ttgtttACGCCGATGCCAACCGAAGGTATTAAGCGACTGAATCAGCTTTATCGTCAGCCGACTATCGAAAACCTGAAGCTGATGATtgtagat                                                                                       >  1:4635510‑M2/1‑86 (MQ=255)
         gtttACGCCGATGCCAACCGAAGGTATTAAGCGACTGAATCAGCTTTATCGTCAGCCGACTATCGAAAACCTGAAGCTGATGATtgtagattc                                                                                     <  2:8926198‑M2/93‑10 (MQ=255)
           ttACGCCGATGCCAACCGAAGGTCTTAAGCGACTGAATCAGCTTTATCGTCAGCCGACTATCGAAAACCTGAAGCTGATGATtgtagattcaa                                                                                   >  2:5534492‑M2/1‑82 (MQ=255)
           ttACGCCGATGCCAACCGAAGGTATTAAGCGACTGAATCAGCTTTATCGTCAGCCGACTATCGAAAACCTGAAGCTGATGATtgtagattcaa                                                                                   >  2:4257530‑M2/1‑82 (MQ=255)
           cagaccgagaaagacactgaagttcaaaacaccgaaagagataattgaaaggggtgttgcattgacagattgaatctacaATGGATATCTTCg                                                                                   >  2:1604421‑M2/81‑93 (MQ=255)
             gaccgagaaagacactgaagttcaaaacaccgaaagagataattgaaaggggtgttgcattgacagattgaatctacaATGGATATCTTCGtt                                                                                 >  2:9504440‑M2/79‑93 (MQ=255)
              cGCCGATGCCAACCGAAGGTATTAAGCGACTGAATCAGCTTTATCGTCAGCCGACTATCGAAAACCTGAAGCTGATGATtgtagattcaattg                                                                                <  1:2939567‑M2/93‑15 (MQ=255)
               gCCGATGCCAACCGAAGGTATTAAGCGACTGAATCAGCTTTATCGTCAGCCGACTATCGAAAACCTGAAGCTGATGATtgtagattcaattgg                                                                               <  1:1485122‑M2/93‑16 (MQ=255)
                 gagaaagacactgaagttcaaaacaccgaaagagataattgaaaggggtgttgcatttacagattgaatctacaATGGATATCTTCGTTTTTg                                                                             <  1:4963761‑M2/19‑1 (MQ=255)
                   gaaagacactgaagttcaaaacaccgaaagagataattgaaaggggtgttgcattgacagattgaatctacaATGGATATCTTCGTTTTTGAt                                                                           >  1:2188316‑M2/73‑93 (MQ=255)
                   aTGCCAACCGAAGGTATTAAGCGACTGAATCAGCTTTATCGTCAGCCGACTATCGAAAACCTGAAGCTGATGATtgtagattcaattggtcaa                                                                           <  1:2457178‑M2/93‑20 (MQ=255)
                    tGCCAACCGAAGGTATTAAGCGACTGAATCAGCTTTATCGTCAGCCGACTATCGAAAACCTGAAGATGATGATtgtagattcaattggtcaac                                                                          >  1:3272979‑M2/1‑73 (MQ=255)
                    aaagacactgaagttcaaaacaccgaaagagataattgaaaggggtgttgcattgacagattgaatctacaATGGATATCTTCGTTTTTGATa                                                                          <  2:3215053‑M2/22‑1 (MQ=255)
                    aaagacactgaagttcaaaacaccgaaagagataattgaaaggggtgttgcattgacagattgaatctacaATGGATATCTTCGTTTTTGATa                                                                          <  1:7577916‑M2/22‑1 (MQ=255)
                      agacactgaagttcaaaacaccgaaagagataattgaaaggggtgttgcattgacagattgaatctacaATGGATATCTTCGTTTTTGATAcc                                                                        <  1:9200717‑M2/24‑1 (MQ=255)
                       cAACCGAAGGTATTAAGCGACTGAATCAGCTTTATCGTCAGCCGACTATCGAAAACCTGAAGCTGATGATtgtagattcaattggtcaacgca                                                                       <  2:3077785‑M2/93‑24 (MQ=255)
                         cactgaagttcaaaacaccgaaagagataattgaaaggggtgttgcattgacagattgaatctacaATGGATATCTTCGTTTTTGATACCAGc                                                                     >  2:2716605‑M2/67‑93 (MQ=255)
                           ctgaagttcaaaacaccgaaagagataattgaaaggggtgttgcattgacagattgaatctacaATGGATATCTTCGTTTTTGATACCAGcgt                                                                   >  2:5863317‑M2/65‑92 (MQ=255)
                            tgaagttcaaaacaccgaaagagataattgaaaggggtgttgcattgacagattgaatctacaATGGATATCTTCGTTTTTGATACCAGCGAt                                                                  >  2:1158295‑M2/64‑93 (MQ=255)
                             gaagttcaaaacaccgaaagagataattgaaaggggtgttgcattgacagattgaatctacaATGGATATCTTCGTTTTTGATACCAGCGAtt                                                                 <  1:1091679‑M2/31‑1 (MQ=255)
                               agttcaaaacaccgaaagagataattgaaaggggtgttgcattgacagattgaatctacaATGGATATCTTCGTTTTTGATACCAGCGATTTg                                                               <  1:8294418‑M2/33‑1 (MQ=255)
                                gTATTAAGCGACTGAATCAGCTTTATCGTCAGCCGACTATCGAAAACCTGAAGCTGATGATtgtagattcaattggtcaacgcaacagttatg                                                              <  1:6080315‑M2/93‑33 (MQ=255)
                                 tATTAAGCGACTGAATCAGCTTTATCGTCAGCCGACTATCGAAAACCTGAAGCTGATGATtgtagattcaattggtcaacgcaacagttatgt                                                             <  2:4585856‑M2/93‑34 (MQ=255)
                                  aTTAAGCGACTGAATCAGCTTTATCGTCAGCCGACTATCGAAAACCTGAAGCTGATGATtgtagattcaattggtcaacgcaacagttatgtg                                                            <  2:5731992‑M2/93‑35 (MQ=255)
                                   ttAAGCGACTGAATCAGCTTTATCGTCAGCCGACTATCGAAAACCTGAAGCTGATGATtgtagattcaattggtcaacgcaacagttatgtga                                                           <  2:736259‑M2/93‑36 (MQ=255)
                                   ttAAGCGACTGAATCAGCTTTATCGTCAGCCGACTATCGAAAACCTGAAGCTGATGATtgtagattcaattggtcaacgcaacagttatgtga                                                           <  2:6383871‑M2/93‑36 (MQ=255)
                                   ttAAGCGACTGAATCAGCTTTATCGTCAGCCGACTATCGAAAACCTGAAGCTGATGATtgtagattcaattggtcaacgcaacagttatgtga                                                           <  1:2626908‑M2/93‑36 (MQ=255)
                                   caaaacaccgaaagagataattgaaaggggtgttgcattgacagattgaatctacaATGGATATCTTCGTTTTTGATACCAGCGATTTGACCg                                                           >  1:589744‑M2/57‑93 (MQ=255)
                                    tAAGCGACTGAATCAGCTTTATCGTCAGCCGACTATCGAAAACCTGAAGCTGATGATtgtagattcaattggtcaacgcaacagttatgtgaa                                                          <  2:8377073‑M2/93‑37 (MQ=255)
                                    tAAGCGACTGAATCAGCTTTATCGTCAGCCGACTATCGAAAACCTGAAGCTGATGATtgtagattcaattggtcaacgcaacagttatgtgaa                                                          >  1:6773447‑M2/1‑57 (MQ=255)
                                    tAAGCGACTGAATCAGCTTTATCGTCAGCCGACTATCGAAAACCTGAAGCTGATGATtgtagattcaattggtcaacgcaacagttatgtgaa                                                          <  1:5095085‑M2/93‑37 (MQ=255)
                                    gaaacaccgaatgagataattgaaaggggtgttgcattgacagattgaatctacaATGGATATCTTCGTTTTTGATACCAGCGAGTTGACCGa                                                          <  2:1379063‑M2/38‑1 (MQ=255)
                                    aaaacaccgaaagagataattgaaaggggtgttgcattgacagattgaatctacaATGGATATCTTCGTTTTTGATACCAGCGATTTGACCGa                                                          >  1:2285173‑M2/56‑93 (MQ=255)
                                      aGCGACTGAATCAGCTTTATCGTCAGCCGACTATCGAAAACCTGAAGCTGATGATtgtagattcaattggtcaacgcaacagttatgtgaaaa                                                        >  2:7877417‑M2/1‑55 (MQ=255)
                                       acaccgaaagagataattgaaaggggtgttgcattgacagattgaatctacaATGGATATCTTCGTTTTTGATACCAGCGATTTGACCGACGc                                                       >  1:7001688‑M2/53‑93 (MQ=255)
                                        cGACTTAATCAGCTTTATCGTCAGCCGACTATCGAAAACCTGAAGCTGATGATtgtagattcaattggtcaacgcaacagttatgtgaaaaca                                                      >  1:3588490‑M2/1‑53 (MQ=255)
                                            tGAATCAGCTTTATCGTCAGCCGACTATCGAAAACCTGAAGCTGATGATtgtagattcaattggtcaacgcaacagttatgtgaaaacatggg                                                  <  2:3974330‑M2/93‑45 (MQ=255)
                                             gAATCAGCTTTATCGTCAGCCGACTATCGAAAACCTGAAGCTGATGATtttagattcaattggtcaacgcaacagttatgtgaaaacatgggg                                                 <  1:8113700‑M2/93‑46 (MQ=255)
                                             gAATCAGCTTTATCGTCAGCCGACTATCGAAAACCTGAAGCTGATGATtgtagattcaattggtcaacgcaacagttatgtgaaaacatgggg                                                 >  2:6456091‑M2/1‑48 (MQ=255)
                                             aaagagataattgaaaggggtgttgcattgacagattgaatctacaATGGATATCTTCGTTTTTGATACCAGCGATTTGACCGACGCCCTGtt                                                 <  2:5112382‑M2/47‑1 (MQ=255)
                                              aaTCAGCTTTATCGTCAGCCGACTATCGAAAACCTGAAGCTGATGATtgtagattcaattggtcaacgcaacagttatgtgaaaacatggggt                                                <  2:6066215‑M2/93‑47 (MQ=255)
                                               agagataattgaaaggggtgttgcattgacagattgaatctacaATGTATATCTTCGTTTTTGATACCAGCGATTTGACCGACGCCCTGTTTg                                               <  1:9636571‑M2/49‑1 (MQ=255)
                                               agagataattgaaaggggtgttgcattgacagattgaatctacaATGGATATCTTCGTTTTTGATACCAGCGATTTGACCGACGCCCTGTTTg                                               >  1:1377641‑M2/45‑93 (MQ=255)
                                               aTCAGCTTTATCGTCAGCCGACTATCGAAAACCTGAAGCTGATGATtgtagattcaattggtcaacgcaacagttatgtgaaaacatggggtt                                               <  2:1265542‑M2/93‑48 (MQ=255)
                                                 agataattgaaaggggtgttgcattgacagattgaatctacaATGGATATCTTCGTTTTTGATACCAGCGATTTGACCGACGCCCTGTTTGaa                                             <  2:2551986‑M2/51‑1 (MQ=255)
                                                  gataattgaaaggggtgttgcattgacagattgaatctacaATGGATATCTTCGTTTTTGATACCAGCGATTTGACCGACGCCCTGTTTGAAg                                            >  2:8005703‑M2/42‑93 (MQ=255)
                                                  gataattgaaaggggtgttgcattgacagattgaatctacaATGGATATCTTCGTTTTTGATACCAGCGATTTGACCGACGCCCTGTTTGAAg                                            >  2:816091‑M2/42‑93 (MQ=255)
                                                  gataattgaaaggggtgttgcattgacagattgaatctacaATGGATATCTTCGTTTTTGATACCAGCGATTTGACCGACGCCCTGTTTGAAg                                            <  2:916430‑M2/52‑1 (MQ=255)
                                                   gCTTTATCGTCAGCCGACTATCGAAAACCTGAAGCTGATGATtgtagattcaattggtcaacgcaacagttatgtgaaaacatggggttgcgg                                           >  2:3608502‑M2/1‑42 (MQ=255)
                                                   ataattgaaaggggtgttgcattgacagattgaatctacaATGGATATCTTCGTTTTTGATACCAGCGATTTGACCGACGCCCTGTTTGAAgc                                           <  2:1838419‑M2/53‑1 (MQ=255)
                                                    cTTTATCGTCAGCCGACTATCGAAAACCTGAAGCTGATGATtgtagattcaattggtcaacgcaacagttatgtgaaaacatggggttgcgga                                          >  1:3742362‑M2/1‑41 (MQ=255)
                                                      ttATCGTCAGCCGACTATCGAAAACCTGAAGCTGATGATtgtagattcaattggtcaacgcaacagttatgtgaaaacatggggttgcggagg                                        >  2:335386‑M2/1‑39 (MQ=255)
                                                      ttATCGTCAGCCGACTATCGAAAACCTGAAGCTGATAATtttagattcaatttgtcaacgcaacagttacgtgaaaacatatggtagtggagg                                        <  2:6908499‑M2/93‑55 (MQ=255)
                                                       tATCGTCAGCCGACTATCGAAAACCTGAAGCTGATGATtgtagattcaattggtcaacgcaacagttatgtgaaaacatggggttgcggaggt                                       >  2:7037180‑M2/1‑38 (MQ=255)
                                                        tgaaaggggtgttgcattgacagattgaatctacaATGGATATCTTCGTTTTTGATACCAGCGATTTGACCGACGCCCTGTTTGAAGCGCGcc                                      >  1:1954315‑M2/36‑93 (MQ=255)
                                                          aaaggggtgttgcattgacagattgaatctacaATGGATATCTTCGTTTTTGATACCAGCGATTTGACCGACGCCCTGTTTGAAGCGCGCCTg                                    >  1:7210680‑M2/34‑93 (MQ=255)
                                                           aaggggtgttgcattgacagattgaatctacaATGGATATCTTCGTTTTTGATACCAGCGATTTGACCGACGCCCTGTTTATAGCGCGCCTGa                                   >  2:559032‑M2/33‑93 (MQ=255)
                                                            aggggtgttgcattgacagattgaatctacaATGGATATCTTCGTTTTTGATACCAGCGATTTGACCGACGCCCTGTTTGAAGCGCGCCTGaa                                  <  1:6224302‑M2/62‑1 (MQ=255)
                                                            aggggtgttgcattgacagattgaatctacaATGGATATCTTCGTTTTTGATACCAGCGATTTGACCGACGCCCTGTTTGAAGCGCGCCTGaa                                  >  1:4902820‑M2/32‑93 (MQ=255)
                                                             ggggtgttgcattgacagattgaatctacaATGGATATCTTCGTTTTTGATACCAGCGATTTGACCGACGCCCTGTTTGAAGCGCGCCtgaca                                 >  2:2041512‑M2/31‑91 (MQ=255)
                                                             ggggtgttgcattgacagattgaatctacaATGGATATCTTCGTTTTTGATACCAGCGATTTGACCGACGCCCTGTTTGAAGCGCGCCTGaat                                 >  1:4420578‑M2/31‑93 (MQ=255)
                                                              gggtgttgcattgacagattgaatctacaATGGATATCTTCGTTTTTGATACCAGCGATTTGACCGACGCCCTGTTTGAAGCGCGCCTGaata                                <  1:6577852‑M2/64‑1 (MQ=255)
                                                               ggtgttgcattgacagattgaatctacaATGGATATCTTCGTTTTTGATACCAGCGATTTGACCGACGCCCTGTTTGAAGCGCGCCTGaataa                               <  1:10001055‑M2/65‑1 (MQ=255)
                                                               ggtgttgcattgacagattgaatctacaATGGATATCTTCGTTTTTGATACCAGCGATTTGACCGACGCCCTGTTTGAAGCGCGCCTGaataa                               <  2:4981204‑M2/65‑1 (MQ=255)
                                                               gCCGACTATCGAAAACCTGAAGCTGATGATtgtagattcaattggtcaacgcaacagttatgtgaaaacatggggttgcggaggttttttgaa                               <  1:9801657‑M2/93‑64 (MQ=255)
                                                                ccGACTATCGAAAACCTGAAGCTGATGATtgtagattcaattggtcaacgcaacagttatgtgaaaacatggggttgcggagggtttctgaat                              <  2:9822934‑M2/93‑65 (MQ=255)
                                                                 tgttgcattgacagattgaatctacaATGGATATCTTCGTTTTTGATACCAGCGATTTGACCGACGCCCTGTTTGAAGCGCGCCTGAataata                             <  1:8774672‑M2/67‑1 (MQ=255)
                                                                 cGACTATCGAAAACCTGAAGCTGATGATtgtagattcaattggtcaacgcaacagttatgtgaaaacatggggttgcggaggttttttgaatg                             >  1:3188213‑M2/1‑28 (MQ=255)
                                                                  gttgcattgacagattgaatctacaATGGATATCTTCGTTTTTGATACCAGCGATTTGACCGACGCCCTGTTTGAAGCGCGCCTGAATAatat                            >  1:4778799‑M2/26‑93 (MQ=255)
                                                                  gACTATCGAAAACCTGAAGCTGATGATtgtagattcaattggtcaacgcaacagttatgtgaaaacatggggttgcggaggttttttgaatga                            >  2:8633931‑M2/1‑27 (MQ=255)
                                                                   ttgcattgacagattgaatctacaATGGATATCTTCGTTTTTGATACCAGCGATTTGACCGATGCCCTGTTTGAGCGGTGCCTGACTGATATg                           >  1:7440628‑M2/25‑93 (MQ=255)
                                                                   ttgcattgacagattgaatctacaATGGATATCTTCGTTTTTGATACCAGCGATTTGACCGACGCCCTGTTTGAAGCGCGCCTGAATAATATg                           <  1:5690782‑M2/69‑1 (MQ=255)
                                                                    cTATCGAAAACCTGAAGCTGATGATtgtagattcaattggtcaacgcaacagttatgtgaaaacatggggttgcggaggttttttgaatgagg                          <  2:4087045‑M2/93‑69 (MQ=255)
                                                                     gcattgacagattgaatctacaATGGATATCTTCGTTTTTGATACCAGCGATTTGACCGACGCCCTGTTTGAAGCGCGCCTGAATAATATGCt                         <  2:1474935‑M2/71‑1 (MQ=255)
                                                                     gcattgacagattgaatctacaATGGATATCTTCGTTTTTGATACCAGCGATTTGACCGACGCCCTGTTTGAAGCGCGCCTGAATAATATGCt                         <  1:4276848‑M2/71‑1 (MQ=255)
                                                                      cattgacagattgaatctacaATGGATATCTTCGTTTTTGATACCAGCGATTTGACCGACGCCCTGTTTGAAGCGCGCCTGAATAATATGCTg                        >  1:6336011‑M2/22‑93 (MQ=255)
                                                                       attgacagattgaatctacaATGGATATCTTCGTTTTTGATACCAGCGATTTGACCGACGCCCTGTTTGAAGCGCGCCTGAATAATATGCTGt                       >  1:4068559‑M2/21‑93 (MQ=255)
                                                                       attgacagattgaatctacaATGGATATCTTCGTTTTTGATACCAGCGATTTGACCGACGCCCTGTTTGAAGCGCGCCTGAATAATATGCTGt                       <  1:8635108‑M2/73‑1 (MQ=255)
                                                                         gAAAACCTGAAGCTGATGATtgtagattcaattggtcaacgcaacagttatgtgaaaacatggggttgcggaggttttttgaatgaggcgaac                     <  1:7891532‑M2/93‑74 (MQ=255)
                                                                            cagattgaatctacaATGGATATCTTCGTTTTTGATACCAGCGATTTGACCGACGCCCTGTTTGAAGCGCGCCTGAATAATATGCTGTCgagc                  >  2:7638725‑M2/16‑93 (MQ=255)
                                                                             agattgaatctacaATGGATATCTTCGTTTTTGATACCAGCGATTTGACCGACGCCCTGTTTGAAGCGCGCCTGAATAATATGCTGTCGcgcc                 >  1:9000284‑M2/15‑93 (MQ=255)
                                                                             aCCTGAAGCTGATGATtgtagattcaattggtcaacgcaacagttatgtgaaaacatggggttgcggaggttttttgaatgaggcgaacattt                 >  2:2865039‑M2/1‑16 (MQ=255)
                                                                              gattgaatctacaATGGATATCTTCGTTTTTGATACCAGCGATTTGACCGACGCCCTGTTTGAAGCGCGCCTGAATAATATGCTGTCGcgccg                >  2:4349705‑M2/14‑93 (MQ=255)
                                                                               cTGAAGCTGATGATtgtagattcaattggtcaacgcaacagttatgtgaaaacatggggttgcggaggttttttgaatgaggcgaacatttac               >  2:10013555‑M2/1‑14 (MQ=255)
                                                                               attgaatctacaATGGATATCTTCGTTTTTGATACCAGCGATTTGACCGACGCCCTGTTTGAAGCGCGCCTGAATAATATGCTGTCGcgccgc               <  2:3792667‑M2/81‑1 (MQ=255)
                                                                                   aatctacaATGGATATCTTCGTTTTTGATACCAGCGATTTGACCGACGCCCTGTTTGAAGCGCGCCTGAATAATATGCTGTCGCGCCGCGATc           <  1:1741995‑M2/85‑1 (MQ=255)
                                                                                    gCTGATGATtgtagattcaattggtcaacgcaacagttatgtgaaaacatggggttgcggaggttttttgaatgaggcgaacatttacagcag          <  2:9715138‑M2/93‑85 (MQ=255)
                                                                                         tgattgtagattcaattggtcaacgcaacagttatgtgaaaacatggggttgcggaggttttttgaatgaggcgaacatttacagcagaggaa     <  1:1166844‑M2/93‑90 (MQ=255)
                                                                                            tgGATATCTTCGTTTTTGATACCAGCGATTTGACCGACGCCCTGTTTGAAGCGCGCCTGAATAATATGCTGTCGCGCCGCGATCACCTGGaaa  >  1:3936402/1‑93 (MQ=255)
                                                                                            tgGATATCTTCGTTTTTGATACCAGCGATTTGACCGACGCCCTGTTTGAAGCGCGCCTGAATAATATGCTGTCGCGCCGCGATCACCTGGaaa  <  2:2387276/93‑1 (MQ=255)
                                                                                            |                                                                                            
CATGAGTTTGTTTACGCCGATGCCAACCGAAGGTATTAAGCGACTGAATCAGCTTTATCGTCAGCCGACTATCGAAAACCTGAAGCTGATGATGGATATCTTCGTTTTTGATACCAGCGATTTGACCGACGCCCTGTTTGAAGCGCGCCTGAATAATATGCTGTCGCGCCGCGATCACCTGGAAA  >  NC_000913/370891‑371075

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 20 ≤ ATCG/ATCG < 29 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.