| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| MC JC | NC_000913 | 3,156,257 | (CCA)2→1 | coding (594‑596/930 nt) | yqhG → | hypothetical protein |
| Missing coverage evidence... | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|
| seq id | start | end | size | ←reads | reads→ | gene | description | |||
| * | * | ÷ | NC_000913 | 3156257 | 3156259 | 3 | 222 [0] | [0] 220 | yqhG | hypothetical protein |
| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | = 3156256 | 0 (0.000) | 203 (0.860) | 118/178 | 0.4 | 100% | coding (593/930 nt) | yqhG | hypothetical protein |
| ? | NC_000913 | 3156260 = | 0 (0.000) | coding (597/930 nt) | yqhG | hypothetical protein | |||||
Only 100 of 222 total aligned reads displayed.
AGAACAGCCGGAAGCCTTTGTTGCCGAACTCTTTGAACATATTGCTGATTATAGCTGGCCGTGGACGTGGGTGGTTTCCGACTCTTACCGCCACCAGGCGGTTAATGCCTTCTATAAAACCACCTTCAAGACGGCCAATAATCCCGATGAAGATATGCAAATAGAACGGCAATTTATTTACGACA > NC_000913/3156164‑3156348 | aGAACAGCCGGAAGCCTTTGTTGCCGAACTCTTTGAACATATTGCTGATTATAGCTGGCCGTGGACGTGGGTGGTTTCCGACTCTTACCGCCA > 1:215966‑M1/1‑93 (MQ=255) gAACAGCCGGAAGCCTTTGTTGCCGAACTCTTTGAACATATTGCTGATTATAGCTGGCCGTGGACGTGGGGGGTTTCCGTCTCTTACCGCCAg > 2:5046097‑M1/1‑92 (MQ=255) aaCAGCCGGAAGCCTTTGTTGCCGAACTCTTTGAACATATTGCTGATTATAGCTGGCCGTGGACGTGGGTGGTTTCCGACTCTTACCGCCAgg < 1:1492169‑M1/93‑3 (MQ=255) aCAGCCGGAAGCCTTTGTTGCCGAACTCTTTGAACATATTGCTGATTATAGCTGGCCGTGGACGTGGGTGGTTTCCGACTCTTACCGCCAggc > 2:2296065‑M1/1‑90 (MQ=255) aGCCGGAAGCCTTTGTTGCCGAACTCTTTGAACATATTGCTGATTATAGCTGGCCGTGGACGTGGGTGGTTTCCGACTCTTACCGCCAggcgg < 1:3790435‑M1/93‑6 (MQ=255) gCCGGAAGCCTTTGTTGCCGAACTCTTTGAACATATTGCTGATTATAGCTGGCCGTGGACGTGGGTGGTTTCCGACTCTTACCGCCAggcggt < 1:5657992‑M1/93‑7 (MQ=255) gCCGGAAGCCTTTGTTGCCGAACTCTTTGAACATATTGCTGATTATAGCTGGCCGTGGACGTGGGTGGTTTCCGACTCTTACCGCCAggcggt > 2:743265‑M1/1‑87 (MQ=255) gCCGGAAGCCTTTGTTGCCGAACTCTTTGAACATATTGCTGATTATAGCTGGCCGTGGACGTGGGTGGTTTCCGACTCTTACCGCCAggcggt < 2:2911671‑M1/93‑7 (MQ=255) ccGGAAGCCTTTGTTGCCGAACTCTTTGAACATATTGCTGATTATAGCTGGCCGTGGACGTGGGTGGTTTCCGACTCTTACCGCCAggcggtt > 1:4508688‑M1/1‑86 (MQ=255) cGGAAGCCTTTGTTGCCGAACTCTTTGAACATATTGCTGATTATAGCTGGCCGTGGACGTGGGTGGTTTCCGACTCTTACCGCCAggcggtta > 1:3384183‑M1/1‑85 (MQ=255) ggAAGCCTTTGTTGCCGAACTCTTTGAACATATTGCTGATTATAGCTGGCCGTGGACGTGGGTGGTTTCCGACTCTTACCGCCAggcggttaa < 2:870099‑M1/93‑10 (MQ=255) ggAAGCCTTTGTTGCCGAACTCTTTGAACATATTGCTGATTATAGCTGGCCGTGGACGTGGGTGGTTTCCGACTCTTACCGCCAggcggttaa < 1:585073‑M1/93‑10 (MQ=255) gAAGCCTTTGTTGCCGAACTCTTTGAACATATTGCTGATTATAGCTGGCCGTGGACGTGGGTGGTTTCCGACTCTTACCGCCAggcggttaat < 2:1660184‑M1/93‑11 (MQ=255) gAAGCCTTTGTTGCCGAACTCTTTGAACATATTGCTGATTATAGCTGGCCGTGGACGTGGGTGGTTTCCGACTCTTACCGCCAggcggttaat > 1:5996769‑M1/1‑83 (MQ=255) aaGCCTTTGTTGCCGAACTCTTTGAACATATTGCTGATTATAGCTGGCCGTGGACGTGGGTGGTTTCCGACTCTTACCGCCAggcggttaatg > 1:4724151‑M1/1‑82 (MQ=255) gCCTTTGTTGCCGAACTCTTTGAACATATTGCTGATTATAGCTGGCCGTGGACGTGGGTGGTTTCCGACTCTTACCGCCAggcggttaatgcc < 1:1812302‑M1/93‑14 (MQ=255) gCCTTTGTTGCCGAACTCTTTGAACATATTGCTGATTATAGCTGGCCGTGGACGTGGGTGGTTTCCGACTCTTACCGCCAggcggttaatgcc > 1:5734127‑M1/1‑80 (MQ=255) gCCTTTGTTGCCGAACTCTTTGAACATATTGCTGATTATAGCTGGCCGTGGACGTGGGTGGTTTCCGACTCTTACCGCCAggcggttaatgcc > 1:5068410‑M1/1‑80 (MQ=255) gCCTTTGTTGCCGAACTCTTTGAACATATTGCTGATTATAGCTGGCCGTGGACGTGGGTGGTTTCCGACTCTTACCGCCAggcggttaatgcc > 1:4669145‑M1/1‑80 (MQ=255) gCCTTTGTTGCCGAACTCTTTGAACATATTGCTGATTATAGCTGGCCGTGGACGTGGGTGGTTTCCGACTCTTACCGCCAggcggttaatgcc < 1:457412‑M1/93‑14 (MQ=255) ccTTTGTTGCCGAACTCTTTGAACATATTGCTGATTATAGCTGGCCGTGGACGTGGGTGGTTTCCGACTCTTACCGCCAggcggttaatgcct > 2:3533956‑M1/1‑79 (MQ=255) ccTTTGTTGCCGAACTCTTTGAACATATTGCTGATTATAGCTGGCCGTGGACGTGGGTGGTTTCCGACTCTTACCGCCAggcggttaatgcct > 2:4317075‑M1/1‑79 (MQ=255) cTTTGTTGCCGAACTCTTTGAACATATTGCTGATTATAGCTGGCCGTGGACGTGGGTGGTTTCCGACTCTTACCGCCAggcggttaatgcctt < 2:759469‑M1/93‑16 (MQ=255) cTTTGTTGCCGAACTCTTTGAACATATTGCTGATTATAGCTGGCCGTGGACGTGGGTGGTTTCCGACTCTTACCGCCAggcggttaatgcctt > 2:3746577‑M1/1‑78 (MQ=255) tttGTTGCCGAACTCTTTGAACATATTGCTGATTCTAGCTGGCCGTGGACGTGGGTGGTTTCCGACTCTTACCGCCAggcggttaatgccttc > 2:4417272‑M1/1‑77 (MQ=255) tttGTTGCCGAACTCTTTGAACATATTGCTGATTATAGCTGGCCGTGGACGTGGGTGGTTTCCGACTCTTACCGCCAggcggttaatgccttc > 1:3527800‑M1/1‑77 (MQ=255) ttgttgCCGAACTCTTTGAACATATTGCTGATTATAGCTGGCCGTGGACGTGGGTGGTTTCCGACTCTTACCGCCAggcggttaatgccttct < 2:3831836‑M1/93‑18 (MQ=255) cGAACTCTTTGAACATATTGCTGATTATAGCTGGCCGTGGACGTGGGTGGTTTCCGACTCTTACCGCCAggcggttaatgccttctataaaac < 2:3988887‑M1/93‑25 (MQ=255) gAACTCTTTGAACATATTGCTGATTATAGCTGGCCGTGGACGTGGGTGGTTTCCGACTCTTACCGCCAggcggttaatgccttctataaaacc > 1:1784435‑M1/1‑68 (MQ=255) gAACTCTTTGAACATATTGCTGATTATAGCTGGCCGTGGACGTGGGTGGTTTCCGACTCTTACCGCCAggcggttaatgccttctataaaacc < 1:4034750‑M1/93‑26 (MQ=255) aaCTCTTTGAACATATTGCTGATTATAGCTGGCCGTGGACGTGGGTGGTTTCCGACTCTTACCGCCAggcggttaatgccttctataaaacca < 2:4547074‑M1/93‑27 (MQ=255) aaCTCTTTGAACATATTGCTGATTATAGCTGGCCGTGGACGTGGGTGGTTTCCGACTCTTACCGCCAggcggttaatgccttctataaaacca > 1:1611932‑M1/1‑67 (MQ=255) ctctTTGAACATATTGCTGATTATAGCTGGCCGTGGACGTGGGTGGTTTCCGACTCTTACCGCCAggcggttaatgccttctataaaaccacc < 2:2494674‑M1/93‑29 (MQ=255) ctctTTGAACATATTGCTGATTATAGCTGGCCGTGGACGTGGGTGGTTTCCGACTCTTACCGCCAggcggttaatgacttctataaaaccacc > 2:491828‑M1/1‑65 (MQ=255) tctTTGAACATATTGCTGATTATAGCTGGCCGTGGACGTGGGTGGTTTCCGACTCTTACCGCCAggcggttaatgccttctataaaaccacct > 1:4751958‑M1/1‑64 (MQ=255) tttGAACATATTGCTGATTATAGCTGGCCGTGGACGTGGGTGGTTTCCGACTCTTACCGCCAggcggttaatgccttctataaaaccaccttc > 1:727772‑M1/1‑62 (MQ=255) ttGAACATATTGCTGATTATAGCTGGCCGTGGACGTGGGTGGTTTCCGACTCTTACCGCCAggcggttaatgccttctataaaaccaccttca < 1:4229210‑M1/93‑33 (MQ=255) tGAACATATTGCTGATTATAGCTGGCCGTGGACGTGGGTGGTTTCCGACTCTTACCGCCAggcggttaatgccttctataaaaccaccttcaa < 1:938621‑M1/93‑34 (MQ=255) gAACATATTGCTGATTATAGCTGGCCGTGGACGTGGGTGGTTTCCGACTCTTACCGCCAggcggttaatgccttctataaaaccaccttcaag > 2:3904903‑M1/1‑59 (MQ=255) aaCATATTGCTGATTATAGCTGGCCGTGGACGTGGGTGGTTTCCGACTCTTACCGCCAggcggttaatgccttctataaaaccaccttcaaga < 2:3245673‑M1/93‑36 (MQ=255) aCATATTGCTGATTATAGCTGGCCGTGGACGTGGGTGGTTTCCGACTCTTACCGCCAggcggttaatgccttctataaaaccaccttcaagac < 2:1621960‑M1/93‑37 (MQ=255) cATATTGCTGATTATAGCTGGCCGGGGACGTGGGTGGTTTCCGACTCTTACCGCCAggcggttaatgccttctataaaaccaccttcaagacg < 2:6184001‑M1/93‑38 (MQ=255) tatTGCTGATTATAGCTGGCCGTGGACGTGGGTGGTTTCCGACTCTTACCGCCAggcggttaatgccttctataaaaccaccttcaagacggc < 2:1257093‑M1/93‑40 (MQ=255) tatTGCTGATTATAGCTGGCCGTGGACGTGGGTGGGTTCCGACTCTTACCGCCAggcggttaatgccttctatcaaaccaccttcaagacggc > 2:4341177‑M1/1‑54 (MQ=255) atTGCTGATTATAGCTGGCCGTGGACGTGGGTGGTTTCCGACTCTTACCGCCAggcggttaatgccttctataaaaccaccttcaagacggcc > 1:2617065‑M1/1‑53 (MQ=255) tGCTGATTATAGCTGGCCGTGGACGTGGGTGGTTTCCGACTCTTACCGCCAggcggttaatgccttctataaaaccaccttcaagacggccaa < 1:1263934‑M1/93‑43 (MQ=255) tGATTATAGCTGGCCGTGGACGTGGGTGGTTTCCGACTCTTACCGCCAggcggttaatgccttctataaaaccaccttcaagacggccaataa > 1:5331168‑M1/1‑48 (MQ=255) ttATAGCTGGCCGTGGACGTGGGTGGTTTCCGACTCTTACCGCCAggcggttaatgccttctataaaaccaccttcaagacggccaataatcc < 1:197064‑M1/93‑49 (MQ=255) ttATAGCTGGCCGTGGACGTGGGTGGTTTCCGACTCTTACCGCCAggcggttaatgccttctataaaaccaccttcaagacggccaataatcc < 2:498220‑M1/93‑49 (MQ=255) ttATAGCTGGCCGTGGACGTGGGTGGTTTCCGACTCTTACCGCCAggcggttaatgccttctataaaaccaccttcaagacggccaataatcc < 2:3411493‑M1/93‑49 (MQ=255) ttATAGCTGGCCGTGGACGTGGGTGGTTTCCGACTCTTACCGCCAggcggttaatgccttctataaaaccaccttcaagacggccaataatcc < 2:3157679‑M1/93‑49 (MQ=255) tataGCTGGCCGTGGACGTGGGTGGTTTCCGACTCTTACCGCCAggcggttaatgccttctataaaaccaccttcaagacggccaataatccc > 1:3194380‑M1/1‑44 (MQ=255) tataGCTGGCCGTGGACGTGGGTGGTTTCCGACTCTTACCGCCAggcggttaatgccttctataaaaccaccttcaagacggccaataatccc < 2:1277442‑M1/93‑50 (MQ=255) tataGCTGGCCGTGGACGTGGGTGGTTTCCGACTCTTACCGCCAggcggttaatgccttctataaaaccaccttcaagacggccaataatccc < 1:1057126‑M1/93‑50 (MQ=255) taGCTGGCCGTGGACGTGGGTGGTTTCCGACTCTTACCGCCAggcggttaatgccttctataaaaccaccttcaagacggccaataatcccga < 2:5469161‑M1/93‑52 (MQ=255) aGCTGGCCGTGGACGTGGGTGGTTTCCGACTCTTACCGCCAggcggttaatgccttctataaaaccaccttcaagacggccaataatcccgat < 1:3289711‑M1/93‑53 (MQ=255) aGCTGGCCGTGGACGTGGGTGGTTTCCGACTCTTACCGCCAggcggttaatgccttctataaaaccaccttcaagacggccaataatcccgat < 2:5892376‑M1/93‑53 (MQ=255) gCTGGCCGTGGACGTGGGTGGTTTCCGACTCTTACCGCCAggcggttaatgccttctataaaaccaccttcaagacggccaataatcccgatg > 1:2711657‑M1/1‑40 (MQ=255) gtgGCCGTGGACGTGGGTGGTTTCCGACTCTTACCGCCAggcggttaatgccttctataaaaccaccttcaagacggccaataatcccgatga < 2:5534232‑M1/92‑55 (MQ=255) tGGCCGTGGACGTGGGTGGTTTCCGACTCTTACCGCCAggcggttaatgccttctataaaaccaccttcaagacggccaataatcccgatgaa > 2:2362896‑M1/1‑38 (MQ=255) gCCGTGGACGTGGGTGGTTTCCGACTCTTACCGCCAggcggttaatgccttctataaaaccaccttcaagacggccaataatcccgatgaaga < 1:3955538‑M1/93‑58 (MQ=255) ccGTGGACGTGGGTGGTTTCCGACTCTTACCGCCAggcggttaatgccttctataaaaccaccttcaagacggccaataatcccgatgaagat < 2:265046‑M1/93‑59 (MQ=255) gTGGACGTGGGTGGTTTCCGACTCTTACCGCCAggcggttaatgccttctataaaaccaccttcaagacggccaataatcccgatgaagatat < 2:5734127‑M1/93‑61 (MQ=255) gTGGACGTGGGTGGTTTCCGACTCTTACCGCCAggcggttaatgccttctataaaaccaccttcaagacggccaataatcccgatgaagatat < 1:802683‑M1/93‑61 (MQ=255) ggACGTGGGTGGTTTCCGACTCTTACCGCCAggcggttaatgccttctataaaaccaccttcaagacggccaataatcccgatgaagatatgc < 2:1484748‑M1/93‑63 (MQ=255) ggACGTGGGTGGTTTCCGACTCTTACCGCCAggcggttaatgccttctataaaaccaccttcaagacggccaataatcccgatgaagatatgc > 1:6123373‑M1/1‑31 (MQ=255) cGTGGGTGGTTTCCGACTCTTACCGCCAggcggttaatgccttctataaaaccaccttcaagacggccaataatcccgatgaagatatgcaaa < 1:2923893‑M1/93‑66 (MQ=255) cGTGGGTGGTTTCCGACTCTTACCGCCAggcggttaatgccttctataaaaccaccttcaagacggccaataatcccgatgaagatatgcaaa < 1:6010425‑M1/93‑66 (MQ=255) cGTGGGTGGTTTCCGACTCTTACCGCCAggcggttaatgccttctataaaaccaccttcaagacggccaataatcccgatgaagatatgcaaa < 2:5636297‑M1/93‑66 (MQ=255) gtgggtggTTTCCGACTCTTACCGCCAggcggttaatgccttctataaaaccaccttcaagacggccaataatcccgatgaagatatgcaaat > 2:1944002‑M1/1‑27 (MQ=255) gtgggtggTTTCCGACTCTTACCGCCAggcgggtaatgccttctataaaaccaccttcaagacggccaataatcccgatgaagatatgcaaat > 1:2463158‑M1/1‑27 (MQ=255) tgggtggTTTCCGACTCTTACCGCCAggcggttaatgccttctataaaaccaccttcaagacggccaataatcccgatgaagatatgcaaata < 1:4950124‑M1/93‑68 (MQ=255) gtggtTTCCGACTCTTACCGCCAggcggttaatgccttctataaaaccaccttcaagacggccaataatcccgatgaagatatgcaaatagaa < 2:599235‑M1/93‑71 (MQ=255) gtggtTTCCGACTCTTACCGCCAggcggttaatgccttctataaaaccaccttcaagacggccaataatcccgatgaagatatgcaaatagaa < 1:4854821‑M1/93‑71 (MQ=255) tggtTTCCGACTCTTACCGCCAggcggttaatgccttctataaaaccaccttcaagacggccaataatcccgatgaagatatgcaaatagaac > 1:1911839‑M1/1‑22 (MQ=255) ggtTTCCGACTCTTACCGCCAggcggttaatgccttctataaaaccaccttcaagacggccaataatcccgatgaagatatgcaaatagaacg < 2:3276980‑M1/93‑73 (MQ=255) gtTTCCGACTCTTACCGCCAggcggttaatgccttctataaaaccaccttcaagacggccaataatcccgatgaagatatgcaaatagaacgg < 1:2821839‑M1/93‑74 (MQ=255) tttCCGACTCTTACCGCCAggcggttaatgccttctataaaaccaccttcaagacggccaataatcccgatgaagatatgcaaatagaacggc < 2:1052979‑M1/93‑75 (MQ=255) tCCGACTCTTACCGCCAggcggttaatgccttctataaaaccaccttcaagacggccaataatcccgatgaagatatgcaaatagaacggcaa < 2:4303317‑M1/93‑77 (MQ=255) tCCGACTCTTACCGCCAggcggttaatgccttctataaaaccaccttcaagacggccaataatcccgatgaagatatgcaaatagaacggcaa < 1:502612‑M1/93‑77 (MQ=255) tCCGACTCTTACCGCCAggcggttaatgccttctataaaaccaccttcaagacggccaataatcccgatgaagatatgcaaatagaacggcaa < 2:324218‑M1/93‑77 (MQ=255) ccGACTCTTACCGCCAggcggttaatgccttctataaaaccaccttcaagacggccaataatcccgatgaagatatgcaaatagaacggcaat < 1:114091‑M1/93‑78 (MQ=255) gACTCTTACCGCCAggcggttaatgccttctataaaaccaccttcaagacggccaataatcccgatgaagatatgcaaatagaacggcaattt > 1:170833‑M1/1‑14 (MQ=255) aCTCTTACCGCCAggcggttaatgccttctataaaaccaccttcaagacggccaataatcccgatgaagatatgcaaatagaacggcaattta < 2:5379209‑M1/93‑81 (MQ=255) ctctTACCGCCAggcggttaatgccttctataaaaccaccttcaagacggccaataatcccgatgaagatatgcaaatagaacggcaatttat < 2:914837‑M1/93‑82 (MQ=255) ctctTACCGCCAggcggttaatgccttctataaaaccaccttcaagacggccaataatcccgatgaagatatgcaaatagaacggcaatttat < 2:5938420‑M1/93‑82 (MQ=255) ctctTACCGCCAggcggttaatgccttctataaaaccaccttcaagacggccaataatcccgatgaagatatgcaaatagaacggcaatttat > 2:4091287‑M1/1‑12 (MQ=255) tctTACCGCCAggcggttaatgccttctataaaaccaccttcaagacggccaataatcccgatgaagatatgcaaatagaacggcaatttatt > 1:5978026‑M1/1‑11 (MQ=255) tctTACCGCCAggcggttaatgccttctataaaaccaccttcaagacggccaataatcccgatgaagatatgcaaatagaacggcaatttatt < 1:132410‑M1/93‑83 (MQ=255) ctTACCGCCAggcggttaatgccttctataaaaccaccttcaagacggccaataatcccgatgaagatatgcaaatagaacggcaatttattt > 2:2218138‑M1/1‑10 (MQ=255) ttACCGCCAggcggttaatgccttctataaaaccaccttcaagacggccaataatcccgatgaagatatgcaaatagaacggcaatttattta < 1:1331056‑M1/93‑85 (MQ=255) tACCGCCAggcggttaatgccttctataaaaccaccttcaagacggccaataatcccgatgaagatatgcaaatagaacggcaatttatttac < 2:2017872‑M1/93‑86 (MQ=255) cGCCAggcggttaatgccttctataaaaccaccttcaagacggccaataatcccgatgaagatatgcaaatagaacggcaatttatttacgac < 1:1855461‑M1/93‑89 (MQ=255) gCCAggcggttaatgccttctataaaaccaccttcaagacggccaataatcccgatgaagatatgcaaatagaacggcaatttatttacgaca > 1:4243391‑M1/1‑4 (MQ=255) gcagtcggttaatgcctgcaagaaaaccaccttcaagccggccaataatcccgatgaagatatgcaaatagaacggcaatttatttacgacaa < 2:2549912‑M1/92‑91 (MQ=255) cAggcggttaatgccttctataaaaccaccttcaagacggccaataatcccgatgaagatatgcaaatagaacggcaatttatttacgacaat > 2:3265222‑M1/1‑2 (MQ=255) aggcggttaatgccttctataaaaccaccttcaagacggccaataatccctatgaagatatgcaaatagaacggcaatttatttacgacaatc < 1:4429488‑M1/93‑93 (MQ=255) aggcggttaatgccttctataaaaccaccttcaagacggccaataatcccgatgaagatatgcaaatagaacggcaatttatttacgacaatc < 2:3564311‑M1/93‑93 (MQ=255) aggcggttaatgccttctataaaaccaccttcaagacggccaataatcccgatgaagatatgcaaatagaacggcaatttatttacgacaatc < 2:406721‑M1/93‑93 (MQ=255) aggcggttaatgccttctataaaaccaccttcaagacggccaataatcccgatgaagatatgcaaatagaacggcaatttatttacgacaatc < 2:4644514‑M1/93‑93 (MQ=255) | AGAACAGCCGGAAGCCTTTGTTGCCGAACTCTTTGAACATATTGCTGATTATAGCTGGCCGTGGACGTGGGTGGTTTCCGACTCTTACCGCCACCAGGCGGTTAATGCCTTCTATAAAACCACCTTCAAGACGGCCAATAATCCCGATGAAGATATGCAAATAGAACGGCAATTTATTTACGACA > NC_000913/3156164‑3156348 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 23 ≤ ATCG/ATCG < 30 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |