Predicted mutation
evidence seq id position mutation annotation gene description
JC NC_000913 379,244 (G)10→7 intergenic (‑118/+47) yaiN ← / ← yaiO putative alpha helix chain/hypothetical protein

New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913 379240 =42 (0.120)238 (0.750) 113/170 1.1 87.4% intergenic (‑114/+53) yaiN/yaiO putative alpha helix chain/hypothetical protein
?NC_000913 = 379236 30 (0.090)intergenic (‑110/+57) yaiN/yaiO putative alpha helix chain/hypothetical protein

Only 100 of 307 total aligned reads displayed.

GGTATTCTATATGTCAATGCATACCCCCCTATAGTATATAACACTGGAGAATAAAATTTATCCGGTGAATGTGGTCGGAAAACAAAGAGGAAAGGGGGGGGGGCTAATCGGCAGGGAAGGCCGCCCCGGATAGCGGGCGGCAGAAGGAATCAGAATTTCCAGGTCAGACGGGCTGCAAGTTG  >  NC_000913/379144‑379325
                                                                                            |                                                                                         
ggTATTCTATATGTCAATGCATACCCCCCTATAGTATATAACACTGGAGAATAAAATTTATCCGGTGAATGTGGTCGGAAAACAAAGAGGaaa                                                                                           <  2:112709/93‑1 (MQ=255)
ggTATTCTATATGTCAATGCATACCCCCCTATAGTATATAACACTGGAGAATAAAATTTATCCGGTGAATGTGGTCGGAAAACAAAGAGGaaa                                                                                           >  1:3695820/1‑93 (MQ=255)
   aTTCTATATGTCAATGCATACCCCCCTATAGTATATAACACTGGAGAATAAAATTTATCCGGTGAATGTGGTCGGAAAACAAAGAGGAAAggg                                                                                        <  1:2063951‑M2/93‑4 (MQ=255)
    ttCTATATGTCAATGCATACCCCCCTATAGTATATAACACTGGAGAATAAAATTTATCCGGTGAATGTGGTCGGAAAACAAAGAGGAAAgggg                                                                                       >  1:1089174‑M2/1‑89 (MQ=255)
    tgcgatatgtcaATCCATCCCCGCCTATAGTATATAACACTGGAGAATAAAATTTATCCGGTGAATGTGGTCGGAAAACAAAGAGGAAAgggg                                                                                       >  2:2591948‑M2/5‑89 (MQ=255)
     tCTATATGTCAATGCATACCCCCCTATAGTTTATAACACTGGAGAATAAAATTTATCCGGTGAATGTGGTCGGAAAACAAAGAGGAAAggggg                                                                                      >  1:7506424‑M2/1‑88 (MQ=255)
     tCTATATGTCAATGCATACCCCCCTATAGTATATAACACTGGAGAATAAAATTTATCCGGTGAATGTGGTCGGAAAACAAAGAGGAAAggggg                                                                                      >  1:252295‑M2/1‑88 (MQ=255)
      cTATATGTCAATGCATACCCCCCTATAGTATATAACACTGGAGAATAAAATTTATCCGGTGAATGTGGTCGGAAAACAAAGAGGAAAgggggg                                                                                     >  1:4279638‑M2/1‑87 (MQ=255)
       tataTGTCAATGCATACCCCCCTATAGTATATAACACTGGAGAATAAAATTTATCCGGTGAATGTGGTCGGAAAACAAAGAGGAAAggggggg                                                                                    <  2:8703123‑M2/93‑8 (MQ=255)
         tatGTCAATGCATACCCCCCTATAGTATATAACACTGGAGAATAAAATTTATCCGGTGAATGTGGTCGGAAAACAAAGAGGAAAggggggggc                                                                                  >  1:7086585/1‑92 (MQ=255)
         tatGTCAATGCATACCCCCCTATAGTATATAACACTGGAGAATAAAATTTATCCGGTGAATGTGGTCGGAAAACAAAGAGGAAAggggggggc                                                                                  <  2:4349611/93‑2 (MQ=255)
          atGTCAATGCATACCCCCCTATAGTATATAACACTGGAGAATAAAATTTATCCGGTGAATGTGGTCGGAAAACAAAGAGGAAAggggggggct                                                                                 >  1:8137023/1‑91 (MQ=255)
          atGTCAATGCATACCCCCCTATAGTATATAACACTGGAGAATAAAATTTATCCGGTGAATGTGGTCGGAAAACAAAGAGGAAAgggggggcta                                                                                 <  1:5589392‑M2/93‑11 (MQ=255)
           tGTCAATGCATACCCCCCTATAGTATATAACACTGGAGAATAAAATTTATCCGGTGAATGTGGTCGGAAACAAAAGAGAAAAggggggggcta                                                                                >  1:6748232/1‑90 (MQ=255)
           tGTCAATGCATACCCCCCTATAGTATATAACACTGGAGAATAAAATTTATCCGGTGAATGTGGTCGGAAAACAAAGAGGAAAggggggggcta                                                                                <  1:2946066/93‑4 (MQ=255)
           tGTCAATGCATACCCCCCTATAGTATATAACACTGGAGAATAAAATTTATCCGGTGAATGTGGTCGGAAAACAAAGAGGAAAggggggggcta                                                                                >  2:2019835/1‑90 (MQ=255)
               aaTGCATACCCCCCTATAGTATATAACACTGGAGAATAAAATTTATCCGGTGAATGTGGTCGGAACACAAAGAGGAAAggggggggctaatcg                                                                            <  1:4020244‑M2/93‑16 (MQ=255)
               aaTGCATACCCCCCTATAGTATATAACACTGGAGAATAAAATTTATCCGGTGAATGTGGTCGGAAAACAAAGAGGAAAggggggggctaatcg                                                                            <  1:280462‑M2/93‑16 (MQ=255)
               aaTGCATACCCCCCTATAGTATATAACACTGGAGAATAAAATTTATCCGGTGAATGTGGTCGGAAAACAAAGAGGAAAggggggggctaatcg                                                                            <  1:8270784‑M2/93‑16 (MQ=255)
               aaTGCATACCCCCCTATAGTATATAACACTGGAGAATAAAATTTATCCGGTGAATGTGGTCGGAAAACAAAGAGGAAAggggggggctaatcg                                                                            <  2:3159384‑M2/93‑16 (MQ=255)
                aTGCTTCCCCCCCTATAGTATATAACACTGGAGAATAAAATTTATCCGGTGAATGTGGTCGGAAAACAAAGGGGAAAggggggggctaatcgg                                                                           >  2:158418‑M2/1‑77 (MQ=255)
                 tGCATACCCCCCTATAGTATATAACACTGGAGAATAAAATTTATCCGGTGAATGTGGTCGGAAAACAAAGAGGAAAggggggggctaatcggc                                                                          >  2:3607863‑M2/1‑76 (MQ=255)
                  gCATACCCCCCTATAGTATATAACACTGGAGAATAAAATTTATCCGGTGAATGTGGTCGGAAAACAAAGAGGAAAggggggggctaatcggca                                                                         >  2:1153337‑M2/1‑75 (MQ=255)
                   cATACCCCCCTATAGTATATAACACTGGAGAATAAAATTTATCCGGTGAATGTGGTCGGAAAACAAAGAGGAAAggggggggctaatcggcag                                                                        >  1:6699018‑M2/1‑74 (MQ=255)
                     tACCCCCCTATAGTATATAACACTGGAGAATAAAATTTATCCGGTGAATGTTGTCTTGAAACAAAGACTAAA‑‑AGGGGCCGCTAATCGGCAggg                                                                    >  2:5704283/1‑93 (MQ=255)
                     tACCCCCCTATAGTATATAACACTGGAGAATAAAATTTATCCGGTGAATGTGGTCGGAAAACAAAGAGGAAAggggggggctaatcggcaggg                                                                      <  2:82186‑M2/93‑22 (MQ=255)
                       ccccccTATAGTATATAACACTGGAGAATAAAATTTATCCGGTGAATGTGGTCGGAAAACAAAGAGGAAAggggggggctaatcggcagggaa                                                                    >  1:1248121‑M2/1‑70 (MQ=255)
                       ccccccTATAGTATATAACACTGGAGAATAAAATTTATCCGGTGAATGTGGTCGGAAAACAAAGAGGAAAgg                                                                                         >  2:6611731‑M2/1‑70 (MQ=255)
                       ccccccTATAGTATATAACACTGGAGAATAAAATTTATCCGGTGAATGTGGTCGGAAAACAAAGAGGAAAgg                                                                                         <  1:6611731‑M2/72‑3 (MQ=255)
                        cccccTATAGTATATAACACTGGAGAATAAAATTTATCCGGTGAATGTGGTCGGTAAACAAAGAGGAAAggggggggctaatcggcagggaag                                                                   <  2:215209‑M2/93‑25 (MQ=255)
                        cccccTATAGTATATAACACTGGAGAATAAAATTTATCCGGTGAATGTGGTCGGAAAACAAAGAGGAAAggggggggctaatcggcagggaag                                                                   >  1:5455869‑M2/1‑69 (MQ=255)
                        cccccTATAGTATATAACACTGGAGAATAAAATTTATCCGGTGAATGTGGTCGGAAAACAAAGAGGAAAggggggggctaatcggcagggaag                                                                   <  2:8349911‑M2/93‑25 (MQ=255)
                         ccccTATAGTATATAACACTGGAGAATAAAATTTATCCGGTGAATGTGGTCGGAAAACAAAGAGGAAAggggggggctaatcggcagggaagg                                                                  >  2:6041746‑M2/1‑68 (MQ=255)
                          cccTATAGTATATAACACTGGAGAATAAAATTTATCCGGTGAATGTGGTCGGAAAACAAAGAGGAAAggggggggctaatcggcagggaaggc                                                                 <  1:8458447‑M2/93‑27 (MQ=255)
                          cccTATAGTATATAACACTGGAGAATAAAATTTATCCGGTGAATGTGGTCGGAAAACAAAGAGGAAAggggggggctaatcggcagggaaggc                                                                 <  2:7772785‑M2/93‑27 (MQ=255)
                           ccTATAGTATATAACACTGGAGAATAAAATTTATCCGGTGAATGTGGTCGGAAAACAAAGAGGAAAggtgggggctaatcggcagggaaggcc                                                                >  1:2186552‑M2/1‑66 (MQ=255)
                           ccTATAGTATATAACACTGGAGAATAAAATTTATCCGGTGAATGTGGTCGGAAAACAAAGAGGAAAggggggggctaatcggcagggaaggcc                                                                <  1:4473623‑M2/93‑28 (MQ=255)
                            cTATAGTATATAACACTGGAGAATAAAATTTATCCGGTGAATGTGGTCGGAAAACAAAGAGGAAAggggggggctaatcggcagggaaggccg                                                               <  2:4043160‑M2/93‑29 (MQ=255)
                             tataGTATATAACACTGGAGAATAAAATTTATCCGGTGAATGTGGTCGGAAAACAAAGAGGAAAggggggggctaatcggcagggaaggccgc                                                              <  1:6154133‑M2/93‑30 (MQ=255)
                             tataGTATATAACACTGGAGAATAAAATTTATCCGGTGAATGTGGTCGGAAAACAAAGAGGAAAggggggggctaatcggcagggaaggccgc                                                              <  1:8055434‑M2/93‑30 (MQ=255)
                             tataGTATATAACACTGGAGAATAAAATTTATCCGGTGAATGTGGTCGGAAAACAAAGAGGAAAggggggggctaatcggcagggaaggccgc                                                              <  2:8496488‑M2/93‑30 (MQ=255)
                             tataGTATATAACACTGGAGAATAAAATTTATCCGGTGAATGTGGTCGGAAAACAAAGAGGAAAggggggggctaatcggcagggaaggcccc                                                              <  2:3283065‑M2/93‑30 (MQ=255)
                               taGTATATAACACTGGAGAATAAAATTTATCCGGTGAATGTGGTCGGAAAACAAAGAGGAAAggggggggctaatcggcagggaaggccgccc                                                            >  1:7005559‑M2/1‑62 (MQ=255)
                               taGTATATAACACTGGAGAATAAAATTTATCCGGTGAATGTGGTCGGAAAACAAAGAGGAAAggggggggctaatcggcagggaaggccgccc                                                            <  2:7871289‑M2/93‑32 (MQ=255)
                               taGTATATAACACTGGAGAATAAAATTTATCCGGTGAATGTGGTCGGAAAACAAAGAGGAAAggggggggctaatcggcagggaaagcagccc                                                            <  2:3955661‑M2/93‑32 (MQ=255)
                                aGTATATAACACTGGAGAATAAAATTTATCCGGTGAATGTGGTCGGAAAACAAAGAGGAAAggggggggctaatcggcagggaaggccgcccc                                                           <  1:7973680‑M2/93‑33 (MQ=255)
                                  tatataACACTGGAGAATAAAATTTATCCGGTGAATGTGGTCGGAAAACAAAGAGGAAAggggggggctaatcggcagggaaggccgccccgg                                                         <  1:3496353‑M2/93‑35 (MQ=255)
                                  tatataACACTGGAGAATAAAATTTATCCGGTGAATGTGGTCGGAAAACAAAGAGGAAAggggggggctaatcggcagggaaggccgccccgg                                                         >  1:6428236‑M2/1‑59 (MQ=255)
                                   atataACACTGGAGAATAAAATTTATCCGGTGAATGTGGTCGGAAAACAAAGAGGAAAggggggggctaatcggcagggaaggccgccccgga                                                        <  2:3201054‑M2/93‑36 (MQ=255)
                                   atataACACTGGAGAATAAAATTTATCCGGTGAATGTGGTCGGAAAACAAAGAGGAAAggggggggctaatcggcagggaaggcccccccgga                                                        <  2:3087594‑M2/93‑36 (MQ=255)
                                    tataACACTGGAGAATAAAATTTATCCGGTGAATGTGGTCGGAAAACAAAGAGGAAAggggggggctaatcggcagggaaggccgccccggat                                                       >  2:101242‑M2/1‑57 (MQ=255)
                                    tataACACTGGAGAATAAAATTTATCCGGTGAATGTGGTCGGAAAACAAAGAGGAAAggggggggctaatcggcagggaaggccgccccggat                                                       <  1:8307979‑M2/93‑37 (MQ=255)
                                    tataACACTGGAGAATAAAATTTATCCGGTGAATGTGGTCGGAAAACAAAGAGGAAAggggggggctaatcggcagggaaggccgccccggat                                                       >  1:5082143‑M2/1‑57 (MQ=255)
                                    tataACACTGGAGAATAAAATTTATCCGGTGAATGTGGTCGGAAAAAAAGGAGGAAAggggggggctatgcggcagggaaggccgccccggat                                                       >  2:3744138‑M2/1‑57 (MQ=255)
                                     ataACACTGGAGAATAAAATTTATCCGGTGAATGTGGTCGGAAAACAAAGAGGAAAggggggggctaatcggcagggaaggccgccccggata                                                      >  2:4560855‑M2/1‑56 (MQ=255)
                                     ataACACTGGAGAATAAAATTTATCCGGTGAATGTGGTCGGAAAACAAAGAGGAAAGGGGGGGGGCTAATCGGCAGGGAAGGCCGCCCCGGAt                                                     <  1:7558338/93‑1 (MQ=255)
                                      taACACTGGAGAATAAAATTTATCCGGTGAATGTGGTCGGAAAACAAAGAGGAAAggggggggctaatcggcagggaaggccgccccggatag                                                     <  2:7534505‑M2/93‑39 (MQ=255)
                                       aaCACTGGAGAATAAAATTTATCCGGTGAATGTGGTCGGAAAACAAAGAGGAAAggggggggctaatcggcagggaaggccgccccggatagc                                                    >  2:1450667‑M2/1‑54 (MQ=255)
                                        acacGGGAGAATAAAATTGATCGGGTGAATGGGGGCGGAAAACAAAGAGGAAAGGGGGGGGGCTAATCGGCAGGGAAGGCCGCCCCGGATAgc                                                  <  2:4908673/93‑1 (MQ=255)
                                          acTGGAGAATAAAATTTATCCGGTGAATGTGGTCGGAAAACAAAGAGGAAAggggggggctaatcggcagggaaggccgccccggatagcggg                                                 <  1:5895415‑M2/93‑43 (MQ=255)
                                          acTGGAGAATAAAATTTATCCGGTGAATGTGGTCGGAAAACAAAGAGGAAAggggggggctaatcggcagggaaggccgccccggatagcggg                                                 <  2:5803819‑M2/93‑43 (MQ=255)
                                             ggAGAATAAAATTTATCCGGTGAATGTGGTCGGAAAACAAAGAGGAAAggggggggctaatcggcagggaaggccgccccggatagcgggcgg                                              >  2:1326818‑M2/1‑48 (MQ=255)
                                             ggAGAATAAAATTTATCCGGTGAATGTGGTCGGAAAACAAAGAGGAAAggggggggctaatcggcagggaaggccgccccggatagcgggcgg                                              <  2:4212912‑M2/93‑46 (MQ=255)
                                             ggAGAATAAAATTTATCCGGTGAATGTGGTCGGAAAACAAAGAGGAAAggggggggctaatcggcagggaaggccgccccggatagcgggcgg                                              >  1:8601187‑M2/1‑48 (MQ=255)
                                             ggAGAATAAAATTTATCCGGTGAATGTGGTCGGAAAACAAAGAGGAAAggggggggctaatcggcagggaaggccgccccgcatagcgggcgg                                              >  2:5058069‑M2/1‑48 (MQ=255)
                                              gagaATAAAATTTATCCGGTGAATGTGGTCGGAAAACAAAGAGGAAAggggggggctaatcggcagggaaggccgccccggatagcgggcggc                                             >  2:1215996‑M2/1‑47 (MQ=255)
                                                 aaTAAAATTTATCCGGTGAATGTGGTCGGAAAACAAAGAGGAAAggggggggctaatcggcagggaaggccgccccggatagcgggcggcaga                                          >  2:7354277‑M2/1‑44 (MQ=255)
                                                 aaTAAAATTTATCCGGTGAATGTGGTCGGAAAACAAAGAGGAAAggggggggctaatcggcagggaaggccgccccggatagcgggcggcaga                                          >  2:6246194‑M2/1‑44 (MQ=255)
                                                  aTAAAATTTATCCGGTGAATGTGGTCGGCAAACGAAGAGGAGAggggggggctaatcggcggggaaggccgccccggatagcgggcggcaggc                                         >  1:7794353‑M2/1‑43 (MQ=255)
                                                   tAAAATTTATCCGGTGAATGTGGTCGGAAAACAAAGAGGAAAggggggggctaatcggcagggaaggccgccccggatagcggggggcagaag                                        <  2:6376667‑M2/93‑52 (MQ=255)
                                                     aaaTTTATCCGGTGAATGTGGTCGGAAAACAAAGAGGAAAggggggggctaatcggcagggaaggccgccccggatagcgggcggcagaagga                                      >  1:3793812‑M2/1‑40 (MQ=255)
                                                       aTTTATCCGGTGAATGTGGTCGGAAAACAAAGAGGAAAggggggggctaatcggcagggaaggccgccccggatagcgggcggcagaaggaat                                    <  1:1138833‑M2/93‑56 (MQ=255)
                                                       aTTTATCCGGTGAATGTGGTCGGAAAACAAAGAGGAAAggggggggctaatcggcagggaaggccgccccggatagcgggcggcagaaggaat                                    <  1:6068507‑M2/93‑56 (MQ=255)
                                                         ttATCCGGTGAATGTGGTCGGAAAACAAAGAGGAAAggggggggctaatcggcagggaaggccgccccggatagcgggcggcagaaggaatca                                  <  2:5253092‑M2/93‑58 (MQ=255)
                                                         ttATCCGGTGAATGTGGTCGGAAAACAAAGAGGAAAggggggggctaatcggcagggaaggccgccccggatagcgggcggcagaaggaatca                                  <  2:4501213‑M2/93‑58 (MQ=255)
                                                           aTCCGGTGAATGTGGTCGGAAAACAAAGAGGAAAgggggtggctaatcggcagggaaggccgccccggatagcgggcggcagaaggaatcaga                                >  2:6972837‑M2/1‑34 (MQ=255)
                                                              cGGTGAATGTGGTCGGAAAACAAAGAGGAAAggggggggctaatcggcagggaaggccgccccggatagcgggcggcagaaggaatcagaatt                             >  1:4558189‑M2/1‑31 (MQ=255)
                                                               ggTGAATGTGGTCGGAAAACAAAGAGGAAAggggggggctaatcggcagggaaggccgccccggatagcgggcggcagaaggaatcagaattt                            <  2:5401077‑M2/93‑64 (MQ=255)
                                                               ggTGAATGTGGTCGGAAAACAAAGAGGAAAggggggggctaatcggcagggaaggccgccccggatagcgggcggcagaaggaatcagaattt                            >  2:7125651‑M2/1‑30 (MQ=255)
                                                                 tGAATGTGGTCGGAAAACAAAGAGGAAAggggggggctaatcggcagggaaggccgccccggatagcgggcggcagaaggaatcagaatttcc                          >  2:1849693‑M2/1‑28 (MQ=255)
                                                                  gAATGTGGTCGGAAAACAAAGAGGAAAggggggggctaatcggcagggaaggccgccccggatagcgggcggcagaaggaatcagaatttcca                         <  2:2853626‑M2/93‑67 (MQ=255)
                                                                  gAATGTGGTCGGAAAACAAAGAGGAAAggggggggctaatcggcagggaaggccgccccggatagcgggcggcagaaggaatcagaatttcca                         >  2:5848594‑M2/1‑27 (MQ=255)
                                                                   aaTGTGGTCGGAAAACAAAGAGGAAAggggggggctaatcggcagggaaggccgccccggatagcgggcggcagaaggaatcagaatttccag                        <  1:2442002‑M2/93‑68 (MQ=255)
                                                                      gtgGTCGGAAAACAAAGAGGAAAggggggggctaatcggcagggaaggccgccccggatagcgggctgcagaaggaatcagaatttccaggtc                     <  1:4513569‑M2/93‑71 (MQ=255)
                                                                       tgGTCGGAAAACAAAGAGGAAAggggggggctaatcggcagggaaggccgccccggatagcgggcggcagaaggaatcagaatttccaggtca                    >  2:3030685‑M2/1‑22 (MQ=255)
                                                                          tCGGAAAACAAAGAGGAAAggggggggctaatcggcagggaaggccgccccggatagcgggcggcagaaggaatcagaatttccaggtcagac                 <  1:3948135‑M2/93‑75 (MQ=255)
                                                                          tCGGAAAACAAAGAGGAAAggggggggctaatcggcagggaaggccgccccggatagcgggcggcagaaggaatcagaatttccaggtcagac                 <  1:5964612‑M2/93‑75 (MQ=255)
                                                                           cGGAAAACAAAGAGGAAAggggggggctaatcggcagggaaggccgccccggatagcgggcggcagaaggaatcagaatttccaggtcagacg                >  1:1974637‑M2/1‑18 (MQ=255)
                                                                            ggAAAACAAAGAGGAAAggggggggctaatcggcagggaaggccgccccggatagcgggcggcagaaggaatcagaatttccaggtcagacgg               <  1:4059132‑M2/93‑77 (MQ=255)
                                                                            ggAAAACAAAGAGGAAAggggggggctaatcggcagggaaggccgccccggatagccggcggcagaaggaatcagaaattccaggtcagaccg               <  1:3271919‑M2/93‑77 (MQ=255)
                                                                            ggAAAACAAAGAGGAAAGGGGGGGGGCTAATCGGCAGGGAAGGCCGCCCCGGATAGCGGGCGGCAGAAGGAATCAGAATTTCCAGGTCAGACg              >  2:687348/1‑93 (MQ=255)
                                                                             gAAAACAAAGAGGAAAggggggggctaatcggcagggaaggccgccccggatagcgggcggcagaaggaatcagaatttccaggtcagacggg              <  1:1733764‑M2/93‑78 (MQ=255)
                                                                              aaaaCAAAGAGGAAAggggggggctaatcggcagggaaggccgccccggatagcgggcggcagaaggaatcagaatttccaggtcagacgggc             >  2:1425987‑M2/1‑15 (MQ=255)
                                                                               aaaCAAAGAGGAAAggggggggctaatcggcagggaaggccgccccggatagcgggcggcagaaggaatcagaatttccaggtcagacgggct            <  2:5604095‑M2/93‑80 (MQ=255)
                                                                                 aCAAAGAGGAAAggggggggctaatcggcagggaaggccgccccggatagcggggggcggaagggagcagaatttccaggacaaacgggctga          <  1:6912087‑M2/93‑82 (MQ=255)
                                                                                 aCAAAGAGGAAA‑‑GGGGGGGGCTAATCGGCAGGGAAAGCCGCCCCGGGTAGAGGGGGGGAGAAGGGAATAAAAATTCCCGGGCAGGCGggcggc        >  2:4720989/1‑93 (MQ=255)
                                                                                   aaaGAGGAAAggggggggctaatcggcagggaaggccgccccggatagcgggcggcagaaggaatcagaatttccaggtccgacgggctgcaa        <  1:4797173‑M2/93‑84 (MQ=255)
                                                                                   aaaGAGGAAAggggggggctaatcggcagggaaggccgccccggatagcgggcggcagaaggaatcagaatttccaggtcagacgggctgcaa        >  1:2887459‑M2/1‑10 (MQ=255)
                                                                                    aaGAGGAAAggggggggctaatcggcagggaaggccgccccggatagcgggcggcagaaggaatcagaatttccaggtcagacgggctgcaag       >  1:3225268‑M2/1‑9 (MQ=255)
                                                                                      gagGAAAggggggggctaatcggcagggaaggccgccccggatagcgggcggcagaaggaatcagaatttccaggtcagacgggctgcaagtt     >  1:1519454‑M2/1‑7 (MQ=255)
                                                                                            |                                                                                         
GGTATTCTATATGTCAATGCATACCCCCCTATAGTATATAACACTGGAGAATAAAATTTATCCGGTGAATGTGGTCGGAAAACAAAGAGGAAAGGGGGGGGGGCTAATCGGCAGGGAAGGCCGCCCCGGATAGCGGGCGGCAGAAGGAATCAGAATTTCCAGGTCAGACGGGCTGCAAGTTG  >  NC_000913/379144‑379325

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 19 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.