breseq version 0.35.4 revision f352f80f4bc9
mutation predictions | marginal predictions | summary statistics | genome diff | command line log |
Predicted mutations | |||||
---|---|---|---|---|---|
evidence | position | mutation | annotation | gene | description |
JC | 162,220 | +51 bp | intergenic (+131/+243) | mrcB → / ← hemL | fused glycosyl transferase and transpeptidase/glutamate‑1‑semialdehyde aminotransferase |
RA | 1,486,241 | G→A | intergenic (‑2088/‑492) | thrS ← / → yniD | threonyl‑tRNA synthetase/predicted protein |
RA | 1,595,659 | Δ1 bp | coding (22/699 nt) | proQ ← | predicted structural transport element |
RA | 2,073,848 | Δ2 bp | intergenic (+106/+161) | lysV → / ← xapR | tRNA‑Lys/DNA‑binding transcriptional activator |
RA | 2,073,851 | Δ1 bp | intergenic (+109/+159) | lysV → / ← xapR | tRNA‑Lys/DNA‑binding transcriptional activator |
MC JC | 3,245,072 | Δ82 bp | intergenic (‑91/‑736) | pyrE ← / → yicC | orotate phosphoribosyltransferase/conserved protein |
Unassigned new junction evidence | |||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | AP012306 | 841370 = | 258 (1.000) | 199 (0.790) | 117/520 | 0.6 | 42.9% | coding (2312/4461 nt) | mukB | fused chromosome partitioning proteins |
? | AP012306 | = 1108581 | 278 (1.100) | coding (519/909 nt) | oppC | oligopeptide transporter subunit |