mutation predictions | marginal predictions | summary statistics | genome diff | command line log
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breseq version 0.35.4 revision f352f80f4bc9
mutation predictions | marginal predictions | summary statistics | genome diff | command line log |
| Marginal new junction evidence (lowest skew 10 of 17 shown) | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | AP012306 | 3725045 = | 242 (0.940) | 7 (0.030) | 6/454 | 19.0 | 3.5% | intergenic (+38/+493) | gltP/yjcO | glutamate/aspartate:proton symporter/conserved protein |
| ? | AP012306 | = 3725496 | 178 (0.810) | intergenic (+489/+42) | gltP/yjcO | glutamate/aspartate:proton symporter/conserved protein | |||||
| * | ? | AP012306 | = 240678 | 239 (0.930) | 10 (0.040) | 8/516 | 19.1 | 4.2% | coding (919/1056 nt) | dinB | DNA polymerase IV |
| ? | AP012306 | = 240726 | 224 (0.890) | coding (967/1056 nt) | dinB | DNA polymerase IV | |||||
| * | ? | AP012306 | = 937090 | 528 (2.040) | 6 (0.020) | 6/512 | 20.4 | 1.1% | coding (631/1128 nt) | ycdO | conserved protein |
| ? | AP012306 | = 937238 | 541 (2.180) | coding (779/1128 nt) | ycdO | conserved protein | |||||
| * | ? | AP012306 | = 59088 | 280 (1.080) | 6 (0.020) | 6/518 | 20.5 | 2.1% | coding (1518/2352 nt) | polB | DNA polymerase II |
| ? | AP012306 | = 59132 | 276 (1.100) | coding (1474/2352 nt) | polB | DNA polymerase II | |||||
| * | ? | AP012306 | = 3753641 | 186 (0.720) | 5 (0.020) | 5/512 | 21.2 | 2.6% | coding (627/789 nt) | phnC | phosphonate/organophosphate ester transporter subunit |
| ? | AP012306 | = 3753759 | 198 (0.800) | coding (509/789 nt) | phnC | phosphonate/organophosphate ester transporter subunit | |||||
| * | ? | AP012306 | 847929 = | 485 (1.880) | 5 (0.020) | 5/516 | 21.2 | 1.1% | coding (514/1191 nt) | aspC | aspartate aminotransferase, PLP‑dependent |
| ? | AP012306 | 847952 = | 449 (1.790) | coding (491/1191 nt) | aspC | aspartate aminotransferase, PLP‑dependent | |||||
| * | ? | AP012306 | = 3974354 | 269 (1.040) | 4 (0.020) | 4/510 | 21.9 | 1.4% | coding (496/717 nt) | arcA | DNA‑binding response regulator in two‑component regulatory system with ArcB or CpxA |
| ? | AP012306 | = 3974735 | 300 (1.210) | coding (115/717 nt) | arcA | DNA‑binding response regulator in two‑component regulatory system with ArcB or CpxA | |||||
| * | ? | AP012306 | = 994389 | 434 (1.680) | 4 (0.020) | 4/514 | 22.0 | 0.93% | coding (380/642 nt) | ycfM | predicted outer membrane lipoprotein |
| ? | AP012306 | = 994637 | 436 (1.750) | coding (628/642 nt) coding (6/825 nt) |
ycfM ycfN |
predicted outer membrane lipoprotein thiamin kinase |
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| * | ? | AP012306 | = 573707 | 299 (1.160) | 4 (0.020) | 4/512 | 22.0 | 1.4% | coding (219/1221 nt) | nagC | DNA‑binding transcriptional dual regulator |
| ? | AP012306 | = 573858 | 276 (1.110) | coding (68/1221 nt) | nagC | DNA‑binding transcriptional dual regulator | |||||
| * | ? | AP012306 | = 582087 | 284 (1.100) | 4 (0.020) | 4/516 | 22.1 | 1.4% | intergenic (+16/‑34) | ybfM/ybfN | predicted outer membrane porin/predicted lipoprotein |
| ? | AP012306 | = 582094 | 277 (1.110) | intergenic (+23/‑27) | ybfM/ybfN | predicted outer membrane porin/predicted lipoprotein | |||||