| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NZ_CP025268 | = 780065 | 405 (0.700) | 23 (0.050) | 15/200 | 10.1 | 9.0% | intergenic (+98/‑52) | CXP41_RS04095/CXP41_RS04100 | tRNA‑Lys/tRNA‑Val |
| ? | NZ_CP025268 | 780858 = | 172 (0.410) | intergenic (+1/‑276) | CXP41_RS04120/nadA | RtT sRNA/quinolinate synthase NadA | |||||
| Rejected: Coverage evenness skew score above cutoff. | |||||||||||
| Rejected: Frequency below/above cutoff threshold. | |||||||||||
Only 100 of 350 total aligned reads displayed.
CCGGGTCGTTAGCTCAGTTGGTAGAGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAGTTTTAACATCGAAGACAGATGTTAAGCGTGTAGGATAACGTTGCGTCAGCAACGGCCCGTAGGGCGAG‑CGAAG‑CGAGTCATCCTGCACGACCCACCA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NZ_CP025268/779890‑780065‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑agggcgag‑cgaag‑cgagtcatcctgcacgacccaccaATGTAAAAAAGCGCCCTAAAGGCGCTTTTTTGCTATTCAGGCATCCTCAATTTCACTTTGTAAACCTGATGACATCGTCAGAGCTTACTGTGCAAGCAACTCTATGTCGGTGGAATTAGGCGTAAAATGACGCATCCTG > NZ_CP025268/780858‑780996 GGTCGTTAGCTCAGTTGGTAGAGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAGTTTTAACATCTAAAAAAGATGTTAAGCGTGAAGGAAAACGTTGCGAAAGCAACGGCCCGAAGGG > 1:939719/1‑140 GGTCGTTAGCTCAGTTGGTAGAGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAGTTTTAACATCGAAGACAGATGTTAAGCGTGTAGGATAACGTTGCGTCAGCAACGGCCCGTAGGG > 2:7920089/1‑140 GTTAGCTCAGTTGGTAGAGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAGTTTTAACATCGAAGACAGATGTTAAGCGTGTAGGATAACGTTGCGTCAGCAACGGCCCGTAGGGCGAG < 1:1926170/140‑1 TTAGCTCAGTTGGTAGAGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAGTTTTAACATCGAAGACAGATGTTAAGCGTGTAGGATAACGTTGCGTCAGCAACGGCCCGTAGGGCGAG‑C > 1:9370850/1‑140 GCTCAGTTGGTAGAGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAGTTTTAACATCGAAGACAGATGTTAAGCGTGTAGGATAACGTTGCGTCAGCAACGGCCCGTAGGGCGAG‑CGAA < 2:9197574/140‑1 AGTTGGTAGAGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAGTTTTAACATCGAAGACAGATGTTAAGCGTGTAGGATAACGTTGCGTCAGCAACGGCCCGTAGGGCGAG‑CGAAG‑CGA < 1:769630/140‑1 cTTGGTAGAGCACTAGACTTTTAAACAATTGGACGCAGGATCGAATCCTGCACGACCCACCACTGTTAACATCCAAGACAGCTGTTAAGCGTGTAGGATAACGTTGCGTCAGCAACGCCCCGTAGGGCGAG‑CGAAG‑CGAG < 2:1502056/139‑1 GTTTGTAGATCAGATGACTTATTATCCATTGGTCGCAGTTTCGAATCCTGCACGACCCACCAGTGTTAACATCGAAGACAGATGTTAAGCGTGTAGGATAACGATGCTTCAGCAACGGCCCGTAGGGCGAG‑CGAAG‑CGAG < 2:7537126/140‑1 GTTGGTAGTGCAGTTGACTTTTAATAAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAGTTTAAACATCGAAGACAGATGTTAAGCGTGTAGGATAACGTTGCGTCAGCAACGGCCCGTAGGGCGAG‑CGAAG‑CGAG < 1:1320365/140‑1 GTTGGTAGAGCAGTTGAGTTTTAATCAATTGGTCGCAGGTTCGTATCCTGCACGACCCACCAGTTTTAACATCGAAGACAGATGTTAAGCGTGTAGGATAACGTTGCGTCAGCAACGGCCCGTAGGGCGAG‑CGAAG‑CGAG < 2:806997/140‑1 GTTGGTAGAGCAGTTGACTTTTACTCAAGTGGTCGCAGGTTCGAATCCGGCACGCCCCACCAGTTTTAACATCGAAGACAGATGTTAAGCGTGTAGGATAACGTTGCGTCAGCAACGGCCCGTAGGGCGAG‑CGAAG‑CGAG < 1:8127859/140‑1 GTTGGTAGAGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAGTTTTAACATCGAAGACAGATGTTAAGCGTGTAGGATAACGTTGCGTCAGCAACGGCCCGTAGGGCGAG‑CGAAG‑CGAG < 2:6076628/140‑1 GTTGGTAGAGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAGTTTTAACATCGAAGACAGATGTTAAGCGTGTAGGATAACGTTGCGCCAGCAACGGCCCGTAGGGCGAG‑CGAAG‑CGAG < 2:5033207/140‑1 GTTGGTAGAGCAGTTGACTTTTAATCAATTGGTCGCAGGTACGAATCCTGCACGACCCACCAGTTTAAACATCGAAGACAGATGTTAAGCGTGTAGGATAACGTTGCGACAGCAACGGCCCGTAGGGCGAG‑CGAAG‑CGAG < 1:4249885/140‑1 TTGGTAGAGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAGTTTTAACATCGAAGACAGATGTTAAGCGTGTAGGATAACGTTGCGTCAGCAACGGCCCGTAGGGCGAG‑CGAAG‑CGAGT > 1:2863517/1‑140 TTGGTAGAGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAGTTTTAACATCGAAGACAGATGTTAAGCGTGTAGGATAACGTTGCGTCAGCAACGGCCCGTAGGGCGAG‑CGAAG‑CGAGT > 1:1015195/1‑140 TGGTAGAGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAGTTTTAACATCGAAGACAGATGTTAAGCGTGAAGGATAACGTTGCGGCAGCAACGGCCCGTAGGGCGAG‑CGAAG‑CGAGTC > 1:4992456/1‑140 GGTAGAGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAGTTTTAACATCGAATACAGATGTTAAGCGTGTAGGATAACGTTGCGTCAGCAACGGCCCGTAGGGCGAG‑CGAAG‑CGAGTCA < 1:2629112/140‑1 GGTAGAGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAGTTTTAACATCGAAGACAGATGTTAAGCGTGTAGGATAACGTTGCGTCAGCAACGGCCCGTAGGGCGAG‑CGAAG‑CGAGTCA < 1:1544587/140‑1 GGTAGAGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAGTTTTAACATCGAAGACAGATGTTAAGCGTGTAGGATAACGTTGCGTCAGCAACGGCCCGTAGGGCGAG‑CGAAG‑CGAGTCA < 1:479377/140‑1 GGTAGAGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAGTTTTAACATCGAAGACAGATGTTAAGCGTGTAGGATAACGTTGCGTCAGCAACGGCCCGTAGGGCGAG‑CGAAG‑CGAGTCA < 2:4395414/140‑1 GGTAGAGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAGTTTTAACATCGAAGACAGATGTTAAGCGTGTAGGATAACGTTGCGACAGCAACGGCCCGTAGGGCGAG‑CGAAG‑CGAGTCA < 2:3485629/140‑1 GGTAGAGCAGTTGACTTTTAATCAATGGGTCGCAGGTTCTCATCCGGCACGACCCACCAGTTTTAACATCTAACACCGATGTTAAGCGTGAAGGATAACGTTGCGTCAGCAACGGCCCGTAGGGCGAG‑CGAAG‑CGAGTCA < 1:1996459/140‑1 GCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAGTTTTAACATCGAAGACAGATGTTAAGCGTGTAGGATAACGTTGCGGCAGCAACGGCCCGTAGGGCGAG‑CGAAG‑CGAGTCATCCTGC > 1:9677357/1‑140 ctGTTGAATTTTAATCAATTGGTCGCAGGTTCGTATCCTGCACGACCCACCTGTTTTAACATCGACGACAGATGTTAAGCGTGTAGGTTAACGTTGCGTCAGCAACGGCCCGTAGGGCGAG‑CGAAG‑CGAGTCATCCTGCt < 1:223518/138‑2 CAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAGTTTTAACATCTAAGACAGATGTTAAGCGTGTAGGATAACGTTGCGCCAGCAACGGCCCGTAGGGCGAG‑CGAAG‑CGAGTCATCCTGCA < 1:5833847/140‑1 CAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAGTTTTAACATCGAAGACAGATGTTAAGCGTGTAGGATAACGTTGCGTCAGCAACGGCCCGTAGGGCGAG‑CGAAG‑CGAGTCATCCTGCA < 2:6729454/140‑1 CAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAGTTTTAACATCGAAGACAGATGTTAAGCGTGTAGGATAACGTTGCGTCAGCAACGGCCCGTAGGGCGAG‑CGAAG‑CGAGTCATCCTGCA < 1:5217341/140‑1 CAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAGTTTTAACATCGAAGACAGATGTTAAGCGTGTAGGATAACGTTGCGTCAGCAACGGCCCGTAGGGCGAG‑CGAAG‑CGAGTCATCCTGCA < 1:2395347/140‑1 CAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAGTTTTAACATCGAAGACAGATGTTAAGCGTGTAGGATAACGTTGCGTCAGCAACGGCCCGTAGGGCGAG‑CGAAG‑CGAGTCATCCTGCA < 2:8972435/140‑1 CAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAGTTTTAACATCGAAGACAGATGTTAAGCGTGTAGGATAACGTTGCGACAGCAACGGCCCGTAGGGCGAG‑CGACG‑CGAGACATCCTGCA > 2:2665902/1‑140 AGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAGTTTTAACATCGAAGACAGATGTTAAGCGTGTAGGATAACGTTGCGTCAGCAACGGCCCGTAGGGCGAG‑CGAAG‑CGAGTCATCCTGCAC > 1:3031351/1‑140 TTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAGTTTTAACATCTAACACAGATGTTAAGCGTGTAGGATAACGTTGCGACAGCAACGGCCCGTAGGGCGAG‑CGAAG‑CGAGTCATCCTGCACGA > 1:7848555/1‑140 TTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAGTTTTAACATCGAAGACAGATGTTAAGCGTGTAGGATAACGTTGCGTCAGCAACGGCCCGTAGGGCGAG‑CGAAG‑CGAGTCATCCTGCACGA > 1:1642687/1‑140 TTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAGTTTTAACATCGAAGACAGATGTTAAGCGTGTAGGATAACGTTGCGTCAGCAACGGCCCGTAGGGCGAG‑CGAAG‑CGAGTCATCCTGCACGA < 2:6960470/140‑1 GACTTTTAATCATTTGGTCGCAGGTTCGAATCCTGCACGACCCACCAGTTTTAACATCGAAGACAGATGTTAAGCGTGTAGGATAACGTTGCGTCAGCAACGGCCCGTAGGGCGAG‑CGAAG‑CGAGTCATCCTGCACGACC < 1:9175345/140‑1 GACTTTTAATCAATTGGTCGCTGGTTCGAATCCTGCACGACCCACCAGTTTTAACATCGAAGACAGATTTTAAGCGTGTAGGATAACGTTGCGTCAGCAACGGCCCGTAGGGCGAG‑CGAAG‑CGAGTCATCCTGCACGACC < 1:54685/140‑1 GACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAGTTTTCACATCGAAGACAGCTGTTAAGCGTGTATGATAACGTTGCGTCAGCAACGGCCCGTAGTGCGAG‑CGAAG‑CGAGTCATCCTGCACGACC < 2:4553833/140‑1 GACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAGTTTTAACATCGAAGACAGATGTTAAGCGTGTAGGATAACGTTGCGTCAGCAACGGCCCGTAGGGCGAG‑CGAAG‑CGAGTCATCCTGCACGACC < 2:3950401/140‑1 GACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAGTTTTAACATCGAAGACAGATGTTAAGCGTGTAGGATAACGTTGCGTCAGCAACGGCCCGTAGGGCGAG‑CGAAG‑CGAGTCATCCTGCACGACC < 1:5806622/140‑1 CTTTTAATCAATTGGTCGCTGGTTCTAATCCTGCACGACCCACCAGTTTTAACATCGAAGACAGATGTTAAGGGTGTAGGATAACGTTGCGTCAGCAACGGCCCGTAGGGCGAG‑CGAAG‑CGAGTCATCCTGCACGACCCA < 1:3580068/140‑1 TTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAGTTTTAACATCGAAGACAGATGTTAAGCGTGTAGGATAACGTTGCGTCAGCAACGGCCCGTAGGGCGAG‑CGAAG‑CGAGTCATCCTGCACGACCCAC < 2:4992416/140‑1 ataAATCAATTTGTCTCAGTTTCGAATCCTGCACGACCCACCAGTTTTAACATCGAAGACAGATGTTAAGCGTGTAGGATAACGTTGCGTCAGCAACTGCCCGTAGGGCGAG‑CGAAG‑CGAGTCATCCTGCACGACCCACC < 2:294770/137‑1 TTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCATTTTTTAATTTGTACTCTGTTGTAAATCGTGTAGGATAACGTTGCTTCAGCAACGGCCCGTAGGGCGAG‑CGAAG‑CGAGTCATCCTGCACGACCCACC < 1:4356856/140‑1 TTAATCAATTGGTCGCAGGTTCTAATCCTGCACGACCCACCAGTTTTAGCATCGAAGACAGATGTTAAGCGTGTAGGATAACGTTGCGTCAGCAACGGCCCGTAGGGCGAG‑CGAAG‑CGAGTCATCCTGCACGACCCACCA < 1:1158990/140‑1 AATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAGTTTTAACATCTAAGACAGATGTTAAGCGTGTAGGATAACGTTGCGCCAGCAACGGCCCGTAGGGCGAG‑CGAAG‑CGAGTCATCCTGCACGACCCACCAATctta < 2:4309901/140‑5 TTGGTCGCAGTTTCGTATCCTGCACGTCCCACCAGTTTTAACTTCGATGACAGATTTTAAGCGTGTAGGATAACGTTGCGTCAGCAACGGCCCGAAGGGCGAGACGAAGTCGAGTCATCCTGCACGACCCACCAtcctga < 2:939320/140‑7 CACGACCCACCAGTTTTAACATCTAAGACAGATGTTAAGCGTGTAGGATAACGTTGCGTCAGCAACGGCCCGTAGGGCGAG‑CGAAG‑CGAGTCATCCTGCA < 2:9535502/100‑1 GAAGACAGATGTTAAGCGTGTAGGATAACGTTGCGTCAGCAACGGCCCGTAGGGCGAG‑CGAAG‑CGAGTCATCCTGCA > 1:745723/1‑77 TGTAGGATAACGTTGCGTCAGCGACGGCCCGAAGGGCGAG‑CGAAG‑CGAGTCATCCTGCACGACCCACCAATGTAAAAAAGCGCCCTAAAGGCGCTTTTTTGCTATTCAGGCATCCTCAAGTTCACTTTGTAAACCTGATG > 1:4473924/1‑140 TGTAGGATAACGTTGCGTCAGCAACGGCCCGTAGGGCGAG‑CGAAG‑CGAG < 2:9647921/49‑1 TGTAGGATAACGTTGCGTCAGCAACGGCCCGTAGGGCGAG‑CGAAG‑CGAG < 2:7022675/49‑1 TGTAGGATAACGTTGCGTCAGCAACGGCCCGTAGGGCGAG‑CGAAG‑CGAG > 1:7022675/1‑49 GTAGGATAACGTTGCGTCAGCAACGGCCCGTAGGGCGAG‑CGAA < 2:6029854/43‑1 GTAGGATAACGTTGCGTCAGCAACGGCCCGTAGGGCGAG‑CGAA > 1:6029854/1‑43 AACGTTGCGACAGCAACGGCCCGTAGGGCGAG‑CGAAG‑CGAGTCATCCTGCACGACCCAC < 2:9044644/59‑1 CGTTGCGTCAGCAACGGCCCGTAGGGCGAG‑CGAAG‑CGAGTCATCCTGCACGACCCA < 1:9849838/56‑1 CGTTGCGTCAGCAACGGCCCGTAGGGCGAG‑CGAAG‑CGAGTCATCCTGCA > 1:9014771/1‑49 TTGCGTCAGCAACGGCCCGTAGGGCGAG‑CGAAG‑CGAGTCATCCTGCACGACCCACCAATGTAAAAAAGCGCCCTAAAGGCGCTTTTTTGCTATTCAGGCATCCTCAATTTCACTTTGTA < 2:6347059/119‑1 CGTCAGCAACGGCCCGTAGGGCGAG‑CGAAG‑CGAGTCATCCTGCACGACCCACCAATGTAAAAAAGCGCCCTAAAGGCGCTTGTTTGCTATTCAGGCATCCTCAATTTCACTTTGTAAACCTGATGACATCGTCAGAGCTg > 2:1217894/1‑139 CGTCAGCAACGGCCCGTAGGGCGAG‑CGAAG‑CGAGTCATCCTGCACGACCCACC < 1:8013939/53‑1 CGTCAGCAACGGCCCGTAGGGCGAG‑CGAAG‑CGAGTCATCCTGCACGACC < 2:3689996/49‑1 CGAG‑CGACG‑CGAGTCATCCTGCACGACCCACCAATGTAAAAAAGCGCCCTAAAGGCGCTTTTTTGCTATTCAGGCATCCTCAATTTCACTTTGTAAACCTGATGACATCGTCAGAGCTTACTGTGCAAGCAACTCTATGT < 2:2403062/140‑1 CGAG‑CGAAG‑CGAGTCATCCTGCACGACCCACCAATGTAAAAAAGCGCCCTAAAGGCGCTTTTTTGCTATTCAGGCATCCTCAATTTCACTTTGTAAACCTGATGACATCGTCAGAGCTTACTGTGCAAGCAACTCTATGT < 1:3269206/140‑1 CGAG‑CGAAG‑CGAGTCATCCTGCACGACCCACCAATGTAAAAAAGCGCCCTAAAGGCGCTTTTTTGCTATTCAGGCATCCTCAATTTCACTTTGTAAACCTGATGACATCGTCAGAGCTTACTGTGCAAGCAACTCTATGT < 2:5267542/140‑1 CGAG‑CGAAG‑CGAGTCATCCTGCACGACCCACCAATGTAAAAAAGCGCCCTAAAGGCGCTTTTTTGCTATTCAGGCATCCTCAATTTCACTGTGTAAACCTGATGACATCGTCAGAGCTTACTGTGCAAGCAACTCTATGT < 2:8217399/140‑1 GAG‑CGAAG‑CGAGTCATCCTGCACGACCCACCAATGTAAAAAAGCGCCCTAAAGGCGCTTTTTTGCTATTCAGGCATCCTCAATTTCACTTTGTAAACCTGATGACATCGTCAGAGCTTACTGTGCAAGCAACTCTATGTC > 2:3081127/1‑140 GAG‑CGAAG‑CGAGTCATCCTGCACGACCCACCAATGTAAAAAAGCGCCCTAAAGGCGCTNTTTTGCTATTCAGGCATCCTCAATTTCACTTTGTAAACCTGATGACATCGTCAGAGCTTACTGTGCAAGCAACTCTATGTC > 1:6319512/1‑140 GAG‑CGAAG‑CGAGTCATCCTGCACGACCCACCAATGTAAAAAAG < 1:369397/43‑1 AG‑CGAAG‑CGAGTCATCCTGCACGACCCACCAATGTAAAAAAGCGCCCTAAAGGCGCTTTTTTGCTATTCAGGCATCCTCAATTTCACTTTGTAAACCTGATGACATCGTCAGAGCTTACTGTGCAAGCAACTCTATGTCG > 1:6887038/1‑140 AG‑CGAAG‑CGAGTCATCCTGCACGACCCACCAATGTAAAAAAGCGCCCTAAAGGCGCTTTTTTGCTATTCAGGCATCCTCAATTTCACTTTGTAAACCTGATGACATCGTCAGAGCTTACTGTGCAAGCAACTCTATGTCG > 1:853036/1‑140 AG‑CGAAG‑CGAGTCATCCTGCACGACCCACCAATGTAAAAAAGCGCCCTAAAGGCGCTTTTTTGCTATTCAGGCATCCTCAATTTCACTTTGTAAACCTGATGACATCGTCAGAGCTTACTGTGCAAGCAACTCTATGTCG > 1:1289506/1‑140 AG‑CGAAG‑CGAGTCATCCTGCACGACCCACCAATGTAAAAAAGCGCCCTAAAGGCGCTTTTTTGCTATTCAGGCATCCTCAATTTCACTTTGTAAACCTGATGACATCGTC < 1:4905372/110‑1 AG‑CGAAG‑CGAGTCATCCTGCACGACCCACCAATGTAAAAAAGCGCCCTAAAGGCGCTTTTTTGCTATTCAGGCATCCTCAATTTCACTTTGTAAACCTGATGACATCGTC > 2:4905372/1‑110 GAGTCATCCTGCACGACCCACCAATGTAAAAAAGCGCCCTAAAGGCGCTTTTTTGCTATTCAGGCATCCTCAATTTCACTTTGTAAACCTGATGACATCGTCGGAGCTTACTGTGCAAGCAACTCTATGTCGGTGGAATT < 1:5245432/140‑1 CACGACCCACCAATGTAAAAAAGCGCCCTAAAGGCGCTTTTTTGCTATTCAGGCATCCTCAATTTCACTTTGTAAACCTGATGACATCGTCAGAGCTTACTGTGCAAGCAACTCTATGTCGGTGGAATTAGGCGTAAAAT > 2:1634508/1‑140 CGACCCACCAATGTAAAAAAGCGCCCTCAAGGCGCTTTTTTGCTATTCAGGCATCCTCAATTTCACTTTGTAAACCTGATGACATCGTCAGAGCTTACTGTGCAAGCAACTCTATGTCGGTGGAATTAGGCGTAAAATGA > 2:5764148/1‑140 GACCCACCATTGTAAAAAAGCGCCCTACAGGCGCTTTTTTGCTATTCAGGCATCCTCAATTTCACTTTGTAAACCTGATGACATCGTCAGAGCTTACTGTGCAAGCAACTCTATGGCGGTGGAAATAGGCGTAAAATGAC < 2:9730423/140‑1 GACCCACCAATGTAAAAAAGCGCCCTAAAGGCGCTTTTTTGCTATTCAGGCATCCTCAATTTCACTTTGTAAACCTGATGACATCGTCAGAGCTTACTGTGCAAGCAACTCTATGTCGGTGGAATTAGGCGTAAAATGAC < 1:9602790/140‑1 GACCCACCAATGTAAAAAAGCGCCCTAAAGGCGCTTTTTTGCTATTCAGGCATCCTCAATTTCACTTTGTAAACCTGATGACATCGTCAGAGCTTACTGTGCAAGCAACTCTATGTCGGTGGAATTAGGCGTAAAATGAC < 2:2320832/140‑1 ACCCACCAATGTAAAAAAGCGCCCTAAAGGCGCTTTTTTGCTATTCAGGCATCCTCAATTTCACTTTGTAAACCTGATGACATCGTCAGAGCTTACTGTGCAAGCAACTCTATGTCGGTGGAATTAGGCGTAAAATGACG > 2:2814129/1‑140 ACCCACCAATGTAAAAAAGCGCCCTAAAGGCGCTTTTTTGCTATTCAGGCATCCTCAATTTCACTTTGTAAACCTGATGACATCGTCAGAGCTTACTGTGCAAGCAACTCTAGGTCGGTGGAATTAGGCGTAAATTGACG > 2:8698716/1‑140 CCCACCAATGTAAAAAAGCGCCCTAAAGGCGCTTTTTTGCTATTCAGGCATCCTCAATTTCACTTTGTAAACCTGATGACATCGTCAGAGCTTACTGTGCAAGCAACTCTATGTCGGTGGAATTAGGCGTAAAATGACGC > 1:5648338/1‑140 CCCACCAATGTAAAAAAGCGCCCTAAAGGCGCTTTTTTGCTATTCAGGCATCCTCAATTTCACTTTGTAAACCTGATGACATCGTCAGAGCTTACTGTGCAAGCAACTCTATGTCGGTGGAATTAGGCGTAAAATGACGC > 1:6062642/1‑140 CCCACCAATGTAAAAAAGCGCCCTAAAGGCGCTTTTTTGCTATTCAGGCATCCTCAATTTCACTTTGTAAACCTGATGACATCGTCAGAGCTTACTGTGCAAGCAACTCTATGTCGGTGGAATTAGGCGTAAAATGACGC > 1:6162416/1‑140 CCCACCAATGTAAAAAAGCGCCCTAAAGGCGCTTTTTTGCTATTCAGGCATCCTCAATTTCACTTTGTAAACCTGATGACATCGTCAGAGCTTACTGTGCAAGCAACTCTATGTCGGTGGAATTAGGCGTAAAATGACGC > 1:8941285/1‑140 CCCACCAATGTAAAAAAGCGCCCTAAAGGCGCTTTTTTGCTATTCAGGCATCCTCAATTTCACTTTGTAAACCTGATGACATCGTCAGAGCTTACTGTGCAAGCAACTCTATGTCGGTGGAATTAGGCGTAAAATGACGC > 2:7249891/1‑140 CCCACCAATGTAAAAAAGCGCCCTAAAGGCGCTTTTTTGCTATTCAGGCATCCTCAATTTCACTTTGTAAACCTGATGACATCGTCAGAGCTTACTGTGCAAGCAACTCTATGTCGGTGGAATTAGGCGTAAAATGACGC > 2:1938717/1‑140 CCCACCAATGTAAAAAAGCGCCCTAAAGGCGCTTTTTTGCTATTCAGGCATCCTCAATTTCACTTTGTAAACCTGATGACATCGTCAGAGCTTACTGTGCAAGCAACTCTATGTCGGTGGAATTAGGCGTAAAATGACGC > 2:9150577/1‑140 CCCACCAATGTAAAAAAGCGCCCTAAAGGCGCTTTTTTGCTATTCAGGCATCCTCAATTTCACTTTGTAAACCTGATGACATCGTCAGAGCTTACTGTGCAAGCAACTCTATGTCGGTGGAATTAGGCGTAAAATGACGC > 1:3445277/1‑140 CCCACCAATGTAAAAAAGCGCCCTAAAGGCGCTTTTTTGCTATTCAGGCATCCTCAATTTCACTTTGTAAACCTGATGACATCGTCAGAGCTTACTGTGCAAGCAACTCTATGTCGGTGGAATTAGGCGTAAAATGACGC > 2:8541096/1‑140 CCCACCAATGTAAAAAAGCGCCCTAAAGGCGCTTTTTTGCTATTCAGGCATCCTCAATTTCACTTTGTAAACCTGATGACATCGTCAGAGCTTACTGTGCAAGCAACTCTATGTCGGTGGAATTAGGCGTAAAATGACGC > 2:2734184/1‑140 CCCACCAATGTAAAAAAGCGCCCTAAAGGCGCTTTTTTGCTATTCAGGCATCCTCAATTTCACTATGTAAACCTGATGACATCGTCAGAGCTTACTGTGCAAGCAACTCTATGTCGGTGGAATTAGGCGTAAAATGACGC > 1:8688661/1‑140 CCACCAATGTAAAAAAGCGCCCTAAAGGCGCTTTTTTGCTATTCAGGCATCCTCAATTTCACTTTGTAAACCTGATGACATCGTCAGAGCTTACTGTGCAAGCAACTCTATGTCGGTGGAATTAGGCGTAAAATGACGCA < 2:8268505/140‑1 CCACCAATGTAAAAAAGCGCCCTAAAGGCGCTTTTTTGCTATTCAGGCATCCTCAATTTCACTTTGTAAACCTGATGACATCGTCAGAGCTTACTGTGCAAGCAACTCTATGTCGGTGGAATTAGGCGTAAAATGACGCA < 2:5090548/140‑1 ACCAATGTAAAAAAGCGCCCTAAAGGCGCTTTTTTGCTATTCAGGCATCCTCAATTTCACTTTGTAAACCTGATGACATCGTCAGAGCTTACTGTGCAAGCAACTCTATGTCGGTGGAATTAGGCGTAATATGACGCATC > 1:669992/1‑140 ACCAATGTAAAAAAGCGCCCTAAAGGCGCTTTTTTGCTATTCAGGCATCCTCAATTTCACTTTGTAAACCTGATGACATCGTCAGAGCTTACTGTGCAAGCAACTCTATGTCGGTGGAATTAGGCGTAAAATGACGCATC > 1:7246131/1‑140 ACCAATGTAAAAAAGCGCCCTAAAGGCGCTTTTTTGCTATTCAGGCATCCTCAATTTCACTTTGTAAACCTGATGACATCGTCAGAGCTTACTGTGCAAGCAACTCTATGTCGGTGGAATTAGGCGTAAAATGACGCATC > 1:3864236/1‑140 AATGTAAAAAAGCGCCCTAAAGGCGCTTTTTTGCTATTCAGGCATCCTCAATTTCACTTTGTAAACCTGATGACATCGTCAGAGCTTACTGTGCAAGCAACTCTATGTCGGTGGAATTAGGCGTAAAATGACGCATCCTG < 2:7731152/140‑1 AATGTAAAAAAGCGCCCTAAAGGCGCTTTTTTGCTATTCAGGCATCCTCAATTTCACTTTGTAAACCTGATGACATCGTCAGAGCTTACTGTGCAAGCAACTCTATGTCGGTGGAATTAGGCGTAAAATGACGCATCCTG < 1:657782/140‑1 CCGGGTCGTTAGCTCAGTTGGTAGAGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAGTTTTAACATCGAAGACAGATGTTAAGCGTGTAGGATAACGTTGCGTCAGCAACGGCCCGTAGGGCGAG‑CGAAG‑CGAGTCATCCTGCACGACCCACCA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NZ_CP025268/779890‑780065‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑agggcgag‑cgaag‑cgagtcatcctgcacgacccaccaATGTAAAAAAGCGCCCTAAAGGCGCTTTTTTGCTATTCAGGCATCCTCAATTTCACTTTGTAAACCTGATGACATCGTCAGAGCTTACTGTGCAAGCAACTCTATGTCGGTGGAATTAGGCGTAAAATGACGCATCCTG > NZ_CP025268/780858‑780996 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |