| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NZ_CP025268 | = 780065 | 405 (0.700) | 23 (0.050) | 15/200 | 10.1 | 9.0% | intergenic (+98/‑52) | CXP41_RS04095/CXP41_RS04100 | tRNA‑Lys/tRNA‑Val |
| ? | NZ_CP025268 | 780858 = | 172 (0.410) | intergenic (+1/‑276) | CXP41_RS04120/nadA | RtT sRNA/quinolinate synthase NadA | |||||
| Rejected: Coverage evenness skew score above cutoff. | |||||||||||
| Rejected: Frequency below/above cutoff threshold. | |||||||||||
Only 100 of 408 total aligned reads displayed.
TTAATCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAGTTTTAACATCGAAGACAGATGTTAAGCGTGT‑AGGATAACGTTGCGTCAGCAACGGCCCGTAGGGCGAG‑CGAAG‑CGAGTCATCCTGCACGACCCACCACTAATGACGGTGGGTTCGGTGGAAGTAGTTTGTAGTATCCAGCGCAGTATCGGGTGATTAGCTCAGCTGGGAGAGCACCTCCCTTACAAGGAGGGGGTCGGCGGTTCGATCCCGTCATCACCCACCACTCGGGTCG > NZ_CP025268/779926‑780201 | ttGGTCGCAGTTTCGTATCCTGCACGTCCCACCAGTTTTAACTTCGATGACAGATTTTAAGCGTGT‑AGGATAACGTTGCGTCAGCAACGGCCCGAAGGGCGAGACGAAGTCGAGTCATCCTGCACGACccaccatcctga < 2:939320/140‑7 (MQ=14) ttGGTCGCAGGTTCGAATCCTGCACGACCCACCAGTTTTAACATCGAAGACAGATGTTAAGCGTGT‑AGGATAACGTTGCGTCAGCAACGGCCCGTAGGGCGAG‑CGAAG‑CGAGTCATCCTGCACGACCCACCACTAATGAc > 1:9235851/1‑140 (MQ=255) tgggTCGCAGGTTCGAATCCTGCACGACCCACCAGTTTTAACATCGAAGACCGATGTTAAGCGTGT‑AGGATAACGTTGCGTCAGCAACGGCCCGTAGGGCGAG‑CGAAG‑CGAGTCATCCTGCACGACCCACCACTAATGAc < 1:3123862/138‑1 (MQ=255) gTCGCAGGTTCGAATCCTGCACGACCCACCAGTTTTAACATCGAAGACAGATGTTAAGCGTGT‑AGGATAACGTTGCGTCAGCAACGGCCCGTAGGGCGAG‑CGAAG‑CGAGTCATCCTGCACGACCCACCACTAATGACGGt > 2:3148524/1‑140 (MQ=255) gTCGCAGGTTCGAATCCTGCACGACCCACCAGTTTTAACATCGAAGACAGATGTTAAGCGTGT‑AGGATAACGTTGCGTCAGCAACGGCCCGTAGGGCGAG‑CGAAG‑CGAGTCATCCTGCACGACCCACCACTAATGACGGt > 2:418467/1‑140 (MQ=255) gTCGCAGGTTCGAATCCTGCACGACCCAACAGTTTTAACTTCGATGACAGTTTTTAATCGTGT‑TGGATAACGTTGCGTCAGCATCGGCCCGTAGGGCGAG‑CGAAG‑CGAGTCATCCTGCACGACCCACCACTAATGACGGt < 1:7248250/140‑1 (MQ=17) cAGGTTCGAATCCTGCACGAACCACCAGTTTTAACATCGAAGACTGATGTTAAGCGTGT‑AGGATAACGTAGCGTCAGCAACGGCCCGTAGGGAGAG‑CGAAG‑CGAGTCATCCTGCACGACCCACCACTAATGACGGTGGGt < 2:4620532/140‑1 (MQ=255) ggTTCGAATCCTGCACGACCCACCAGTTTTAACATCGAAGACAGATGTTAAGCGTGT‑AGGATAACGTTGCGTCAGCAACGGCCCGTAGGGCGAG‑CGAAG‑CGAGTCATCCTGCACGACCCACCACTAATGACGGTGGGTTc < 1:5279815/140‑1 (MQ=255) gTTCGAATCCTGCACGACCCACCAGTTTTAACATCGAAGACAGATGTTAAGC‑TGTGACGATAACGCTGCGTAAGCAACGGACGGAAGGTCGAG‑CGAAG‑CGAGTCATCCTGCACGTCCCAACACTAATGTCGGTGGGtggg > 2:7873341/1‑137 (MQ=17) gAATCCTGCACGACCCACCAGATTTAACATCGAAGACAGATGTTAAGCGTGT‑AGGATAACGTTGCGTCAGCAACGGCCCGTAGGGCGAG‑CGAAG‑CGAGTCATCCTGCACGACCCACCACTAATGACGGTGGGTTCGGTgg < 1:5787677/140‑1 (MQ=255) aTCCTGCACGACCCACCAGTTTTCACATCGACGACCGATGTTAAGCGAGT‑AGGATAACGTTGCGTCAGCAACGGCCCGTAGGGCGAG‑CGAAG‑CGAGTCATCCTGCACGACCCACCACTAATGACGGTGGGTTCGGTGGaa < 1:2738073/140‑1 (MQ=255) cTGAACGACCCACCAGTTTTAACATCGAAGCGTTATGTTAAGCGTGT‑TGGATAAGGTTGCGTCAGCAACGGCCCGTTGGGCGAG‑CGAAG‑CGAGTCATCCTGCACGACCCACCACTAATGACGGTGGGTTCGGTGGAagta < 1:118682/140‑1 (MQ=18) gCACGACCCACCAGTTTTAACATCGAAGACAGATGTTAAGCGTGT‑AGGATAACGTTGCGTCAGCAACGGCCCGTAGGGCGAG‑CGAAG‑CGAGTCATCCTGCACGACCCACCACTAATGAGGGTGGGTTCGGTGGAagtagt < 1:7687325/140‑1 (MQ=255) gCACGACCCACCAGTTTTAACATCGAAGACAGATGTTAAGCGTGT‑AGGATAACGTTGCGTCAGCAACGGCCCGTAGGGCGAG‑CGAAG‑CGAGTCATCCTGCACGACCCACCACTAATGACGGTGGGTTCGGTGGAagtagt > 1:7157044/1‑140 (MQ=255) aCCCACCAGTTTTAACATCGAAGACAGATGTTAAGCGTGT‑AGGATAACGTTGCGTCAGCAACGGCCCGTAGGGCGAG‑CGAAG‑CGAGTCATCCTGCACGACCCACCACTAATGACGGTGGGTTCGGTGGAAGTAGTTTgta < 1:4313006/140‑1 (MQ=255) aCCCACCAGTTTTAACATCGAAGACAGATGTTAAGCGTGT‑AGGATAACGTTGCGTCAGCAACGGCCCGTAGGGCGAG‑CGAAG‑CGAGTCATCCTGCACGACCCACCACTAATGACGGTGGGTTCGGTGGAAGTAGTTTgta < 1:6970691/140‑1 (MQ=255) aCCCACCAGTTTTAACATCGAAGACAGATGTTAAGCGTGT‑AGGATAACGTTGCGTCAGCAACGGCCCGTAGGGCGAG‑CGAAG‑CGAGTCATCCTGCACGACCCACCACTAATGACGGTGGGTTCGGTGGAAGTAGTTTgta < 2:2427227/140‑1 (MQ=255) aCCCACCAGTTTTAACATCGAAGACAGATGTTAAGCGTGT‑AGGATAACGTTGCGTCAGCAACGGCCCGTAGGGCGAG‑CGAAG‑CGAGTCATCCTGCACGACCCACCACTAATGACGGTGGGTTCGGTGGAAGTAGTTTgta < 2:3766868/140‑1 (MQ=255) aCCCACCAGTTTTAACATCGAAGACAGATGTTAAGCGTGT‑AGGATAACGTTGCGTCAGCAACGGCCCGTAGGGCGAG‑CGAAG‑CGAGTCATCCTGCACGACCCACCACTAATGACGGTGGGTTCGGTGGAAGTAGTTTgta < 2:8523908/140‑1 (MQ=255) aCCCACCAGTTTTAACATCGAAGACAGATGTTAAGCGTGT‑AGGATAACGTTGCGTCAGCAACGGCCCGTAGGGCGAG‑CGAAG‑CGAGTCATCCTGCACGACCCACCACTAATGACGGTGGGTTCGGTGGAAGTAGTTTgta < 2:8849519/140‑1 (MQ=255) cccACCAGTTTTAACATCGAAGACAGATGTTAAGCGTGT‑AGGATAACGTTGCGTCAGCAACGGCCCGTAGGGCGAG‑CGAAG‑CGAGTCATCATGCACGACCCACCACTAATGACGGTGGGTTCGGTGGAAGTAGTTTgtag > 1:2402623/1‑140 (MQ=255) ccaGTTTTCACATCGAAGACAGATTTTAAGCGTGT‑ATGATAACGTTGCGTCAGCAACGGCCCGTAGGGCGAG‑CGAAG‑CGAGTCATCCTGCACGACCCACCACTAATGACGGTGGGTTCGGTGGAAGTAGTTTGTAGTATc < 2:6037641/140‑1 (MQ=255) ccaGTTTTAACTTCGAATTCTGATGTTAAGCGTGT‑AGGATAACGTTGCGTCAGCAACGGCCCGTAGGGCGAG‑CGAAG‑CGAGTCATCCTGCACGACCCACCACTAATGACGGTGGGTTCGGTGGAAGTAGTTTGTAGTATc < 1:8390600/140‑1 (MQ=255) ccaGTTTTAACATCGAAGACAGATGTTAAGCGTGT‑AGGATAACGTTGCGTCAGCAACGGCCCGTAGGGCGAG‑CGAAG‑CGAGTCATCCTGCACGACCCACCACTAATGACGGTGGGTTCGGTGGAAGTAGTTTGTAGTATc < 1:8094474/140‑1 (MQ=255) caGTTTTAACATCGAAGACAGATGTTAAGCGTGT‑AGGATAACGTTGCGTCAGCAACGGCCCGTAGGGCGAG‑CGAAG‑CGAGTCATCCTGCACGACCCACCACTAATGACGGTGGGTTCGGTGGAAGTAGTTTGTAGTATcc < 2:4959140/140‑1 (MQ=255) ttttAACATCGAAGACAGATGTTAAGCGTTT‑AGGATAACGTTGCGTCAGCAACGGCCCGTAGGGCGAG‑CGAAG‑CTAGTCATCCTGCACGACCCACCACTACTGACGGTGGGTTCGGTGGAAGTAGTTTGTAGTATCCAgc < 2:1705583/140‑1 (MQ=255) ttttAACATCGAAGACAGATGTTAAGCGTGT‑AGGATAACGTTGCGTCAGCAACGGCCCGTAGGGCGAG‑CGAAG‑CGAGTCATCCTGCACGACCCACCACTAATGACGGTGGGTTCGGTGGAAGTAGTTTGTAGTATCCAgc < 2:2117326/140‑1 (MQ=255) ttttAACATCGAAGACAGAGGTTAAGCGTGT‑AGGATAACGGTGCGTCAGAATCGGGCCGTAGGGGGAG‑AGTAG‑CGTGTCATCCTGCACGACCCACCACTAATGACGGTGGGTTCGGTGGAAGTAGTTTGTAGTATCCAgc < 2:1246332/140‑1 (MQ=25) tttgAACATCGAAGACAGATGTTAAGCGTGT‑AGGATAACGTTGCGTCAGCAACGGCCCGTAGGGCGAG‑CGAAG‑CGAGTCATCCTGCACGACCCACCACTAATGACGGTGGGTTCGGTGGAAGTAGTTTGTAGTATCCAgc < 2:6799844/140‑1 (MQ=255) tttCACCTCGACGACAGATGTTAAGCGTGG‑AGGATAACGTTGCGTCAGCAACGGCCCGTAGGGCGAG‑CGAAG‑CGAGTCATCCTGCACGACCCCCCACTAATGACGGTGGGTTCGGTGGAAGTAGTTTGTAGTATCCAgcg < 2:4311496/140‑1 (MQ=21) tttAACATCGAAGACAGATGTTAAGCGTGT‑AGGATAACGTTGCGTCAGCAACGGCCCGTAGGGCGAG‑CGAAG‑CGAGTCATCCTGCACGACCCACCACTAATGACGGTGGGTTCGGTGGAAGTAGTTTGTAGTATCCAgcg < 1:6869722/140‑1 (MQ=255) tttAACATCGAAGACAGATGTTAAGCGTGT‑AGGATAACGTTGCGTCAGCAACGGCCCGTAGGGCGAG‑CGAAG‑CGAGTCATCCTGCACGACCCACCACTAATGACGGTGGGTTCGGTGGAAGTAGTTTGTAGTATCCAgcg < 1:7334281/140‑1 (MQ=255) tttAACATAGTAGTCTGATGTTAAGCGTGT‑AGGATAACGTTGCGTCAGCAACGGCCCGTAGGGCGAG‑CGAAG‑CGAGTCATCCTGCACGACCCACCACTAATGACGGTGGGTTCGGTGGAAGTAGTTTGTAGTATCCAgcg < 2:8027563/140‑1 (MQ=255) ttAACATCGAAGACAGATGTTAAGCGTGT‑AGGATAACGTTGCGTCAGCAACGGCCCGTAGGGCGAG‑CGAAG‑CGAGTCATCCTGCACGACCCACCACTCATGACGGTGGGTTCGGTGGAAGTAGGTTGTAGTATCCAgcgc > 1:3221164/1‑140 (MQ=255) ttAACATCGAAGACAGATGTTAAGCGTGT‑AGGATAACGTTGCGTCAGCAACGGCCCGTAGGGCGAG‑CGAAG‑CGAGTCATCCTGCACGACCCACCACTAATGACGGTGGGTTCGGTGGAAGTAGTTTGTAGTATc > 1:5989432/1‑134 (MQ=255) ttAACATCGAAGACAGATGTTAAGCGTGT‑AGGATAACGTTGCGTCAGCAACGGCCCGTAGGGCGAG‑CGAAG‑CGAGTCATCCTGCACGACCCACCACTAATGACGGTGGGTTCGGTGGAAGTAGTTTGTAGTATCCAgcgc > 1:2011606/1‑140 (MQ=255) ttAACATCGAAGACAGATGTTAAGCGTGT‑AGGATAACGTTGCGTCAGCAACGGCCCGTAGGGCGAG‑CGAAG‑CGAGTCATCCTGCACGACCCACCACTAATGACGGTGGGTTCGGTGGAAGTAGTTTGTAGTATCCAgcgc > 1:9075620/1‑140 (MQ=255) ttAACATCGAAGACAGATGTTAAGCGTGT‑AGGATAACGTTGCGTCAGCAACGGCCCGTAGGGCGAG‑CGAAG‑CGAGTCATCCTGCACGACCCACCACTAATGACGGTGGGTTCGGTGGAAGTAGTTTGTAGTATCCAgcgc > 2:5243343/1‑140 (MQ=255) tCGAAGACAGATGTTAAGCGTGT‑AGGATAACGTTGCGTCAGCAACGGCCCGTAGGGCGAG‑CGAAG‑CGAGTCATCCTGCACGACCCACCACTAATGACGGTGGGTTCGGTGGAAGTAGTTTGTAGTATCCAGCGCAGTATc < 2:4821562/140‑1 (MQ=255) gAAGACAGATGTTAAGCGTGT‑AGGATAACGTTGCGTCAGCAACGGCCCGTAGGGCGAG‑CGAAG‑CGAGTCATCCTGCACGACCCACCACTAATGACGGTGGGTTCGGTGGAAGTAGTTTGTAGTATCCAGCGCAGTATCgg > 2:1912277/1‑140 (MQ=255) gAAGACAGATGTTAAGCGTGT‑AGGATAACGTTGCGTCAGCAACGGCCCGTAGGGCGAG‑CGAAG‑CGAGTCATCCTGCACGACCCACCACTAATGACGGTGGGTTCGGTGGAAGTAGTTTGTAGTATCCAGCGCAGTATCgg > 1:7948485/1‑140 (MQ=255) gAAGACAGATGTTAAGCGTGT‑AGGATAACGTTGCGTCAGCAACGGCCCGTAGGGCGAG‑CGAAG‑CGAGTCATCCTGCACGACCCACCACTAATGAAGGTGGGTTCGGTGGAAGTAGTTTGTAGTATCCAGCGCAGTATCgg > 2:9283688/1‑140 (MQ=255) cAGTTGTTAAGCGTGT‑AGGATATCGTTGCGTGAGCAACGGCCCGTAGGGCGAG‑CGAAG‑CGAGTCATCCTGCACGACCCACCACTAATGACGGTGGGTTCGGTGGAAGTAGTTTGTAGTATCCAGCGCAGTATCGGGTGAt < 2:9487600/140‑1 (MQ=255) gATGTTAAGCGTGT‑AGGATAACGTTGCGTCAGCAACGGCCCGTAGGGCGAG‑CGAAG‑CGAGTCATCCTGCACGACCCACCACTAATGACGGTGGGGTCGGTGGAAGTAGAGTGTAGGATCCAGCGCAGTATCGGGttatta > 1:3573601/1‑140 (MQ=21) gATGTTAAGCGTGT‑AGGATAACGTTGCGTCAGCAACGGCCCGTAGGGCGAG‑CGAAG‑CGAGTCATCATGCACGACCCACCACTAATGACGGTGGGTTCGGTGGAAGTAGTTTGTAGTATCCAGCGCAGTATCGGGTGATTa < 1:7427376/140‑1 (MQ=255) aTGTTAAGCGTGT‑AGGATAACGTTGCGTCAGCAACGGCCCGTAGGGCGAG‑CGAAG‑CGAGTCATCCTGCACGACCCACCACTCTTTAAGTTTGGGGCCGTGTAAGTATCTTGTAGTATCCACCGGATTATGGGGTGAGTAg > 2:6268740/1‑140 (MQ=11) tGTTAAGCGTGT‑AGGATAACGTTGCGTCAGCAACGGCCCGTAGGGCGAG‑CGAAG‑CGAGTCATCCTGCACGACCCACCACTAATGACGGTGGGTTCGGTGGAAGTAGTTTGTAGTATCCAGCGCAGTATCGGGTGATTAGc < 2:867945/140‑1 (MQ=255) tGTTAAGCGTGT‑AGGATAACGTAGCGTCAGCAACGGCCCGTAGTGGGAG‑CGAAG‑CGAGTCATCCTGCACGACCCACCACTAATGACGGTGGGTTCGGTGGAAGTAGTTTGTAGTATCCAGCGCAGTATCGGGTGATTAGc < 2:7211634/140‑1 (MQ=255) aGCGTGT‑AGGAGAACGTTGCGTCAGCAACGGCCCGTAGGGCGAG‑CGAAG‑CGAGTCATCCTGCACGACCCACCACTACTGACGGTGGGTTCGGTGGAAGTAGTTTGTAGTATCCAGCGCAGTATCGGGTGATTAGCTCAGc < 2:8473274/140‑1 (MQ=255) tgt‑AGGATAACGTTGCGTCAGCAACGGCCCGTAGGGCGAG‑CGAAG‑CGAGTCATCCTGCACGACCCACCACTACGGACGGTGGGTTCGGTGGAAGTAGTTTGTAGTATCCAGCGCAGTATCGGGTGATTAGCTCAGCTggg < 1:1005637/140‑1 (MQ=255) tgt‑AGGATAACGTTGCGTCAGCAACGGCCCGTAGGGCGAG‑CGAAG‑CGAGTCATCCTGCACGACCCACCACTAATGACGGTGGGTTCGGTGGAAGTAGTTTGTAGTATCCAGCGCAGTATCGGGTGATTAGCTCAGCTggg > 2:1333029/1‑140 (MQ=255) gt‑AGGATAACGTTGCGTCAGCAACGGCCCGTAGGGCGAG‑CGAAG‑CGAGTCATCCTGCACGACCCACCACTAATGACGGTGGGTTCGGTGGAAGTAGTTTGTAGTATCCAGCGCAGTATCGGGTGATTAGCTCAGCTGGga < 2:6473241/140‑1 (MQ=255) gt‑AGGATAACGTTGCGTCAGCAACGGCCCGTAGGGCGAG‑CGAAG‑CGAGTCATCCTGCACGACCCACCAATATTGAAGATGGGAACGGAGGAAGAAGATTTAAGTAAACACCCCTCTATCTCGTGATAAGCTCAGCTggta > 1:6511877/1‑138 (MQ=2) t‑AGGATAACGTTGCGTCAGCAACGGCCCGTAGGGCGAG‑CGAAG‑CGAGTCATCCTGCACGACCCACCACTAATGACGGTGGGTTCGGTGGAAGTAGTTTGTAGTATCCAGCGCAGTATCGGGTGATTAGCTCAGCTGGgag > 2:5427867/1‑140 (MQ=255) t‑AGGATAACGTTGCGTCAGCAACGGCCCGTAGGGCGAG‑CGAAG‑CGAGTCATCCTGCACGACCCACCACTAATGACGGTGGGTTCGGTGGAAGTAGTTTGTAGTATCCAGCGCAGTATCGGGTGATTAGCTCAGCTGGgag > 1:3962562/1‑140 (MQ=255) gATAACGTTGCGTCAGCAACGGCCCGTAGGGCGAG‑CGAAG‑CGAGTCATCCTGCACGACCCACCACTAATGACGGTGGGTTCGGTGGAAGTAGTTTGTAGTATCCAGCGCAGTATCGGGTGATTAGCTCAGCTGGGAGAGc < 1:5433259/140‑1 (MQ=255) gATAACGTTGCCAGCGCAACGGCGCTTTGGGAGAG‑CGAAG‑CGAGTCTTCCTGCACGACCCACCTCGACTCACGGTGTGTTCGGTGGAAGTAGTTTGTAGTATCCAGCGCAGTATCGGGTGATTAGCTCAGCTGGGAGAGc < 2:6404273/140‑1 (MQ=25) aTAACGTTGCGTCAGCAACGGCCCGTAGGGCGAG‑CGAAG‑CGAGTCATCCTGCACGACCCACCACTAATGACGGTGGGTTCGGTGGAAGTAGTTTGTAGTATCCAGCGCAGTATCGGGTGATTAGCTCAGCTGGGAGAGCa < 1:1912277/140‑1 (MQ=255) tAACGTTGCTTCAGCAACGGCGCGTAGGGAGAG‑CGAAG‑CGAGTCTTCCTGCACGACCCACAACGATGGACGGGGGGTTCGGTGGAAGTTGTTTGTAGTATCCAGCGCAGTATCGGGTGATTAGCTCAGCTGGGAGAGCAc < 1:1099349/140‑1 (MQ=37) tAACGTTGCGTCAGCAACGGCCCGTAGGGCGAG‑CGAAG‑CGAGTCATCCTGCACGACCCACCACTACTGACGGTGGGTTCGGTGGAAGTAGTTTGTAGTATCCAGCGCAGTATCGGGTGATTAGCTCAGCTGGGAGAGCAc < 1:6564758/140‑1 (MQ=255) tAACGTTGCGTCAGCAACGGCCCGTAGGGCGAG‑CGAAG‑CGAGTCATCCTGCACGACCCACCACTAATGACGGTGGGTTCGGTGGAAGTAGTTTGTAGTATCCAGCGCAGTATCGGGTGATTAGCTCAGCTGGGAGAGCAc < 2:824273/140‑1 (MQ=255) tAACGTTGCGTCAGCAACGGCCCGTAGGGCGAG‑CGAAG‑CGAGTCATCCTGCACGACCCACCACTAATGACGGTGGGTTCGGTGGAAGTAGTTTGTAGTATCCAGCGCAGTATCGGGTGATTAGCTCAGCTGGGAGAGCAc < 1:4956407/140‑1 (MQ=255) tAACGTTGCGTCAGCAACGGCCCGTAGGGCGAG‑CGAAG‑CGAGTCATCCTGCACGACCCACCACTAATGACGGTGGGTTCGGTGGAAGTAGTTTGTAGTATCCAGCGCAGTATCGGGTGATTAGCTCAGCTGGGAGAGCAc < 1:8881238/140‑1 (MQ=255) aCGTTGCGTCAGCAACGGCCCGTAGGGCGAG‑CGAAG‑CGAGTCATCCTGCACGACCCACCACTAATGACGGTGGGTTCGGTGGAAGTAGTTTGTAGTATCCAGCGCAGTATCGGGTGATTAGCTCAGCTGGGAGAGCACCt < 1:986107/140‑1 (MQ=255) aCGTTGCGTCAGCAACGGCCCGTAGGGCGAG‑CGAAG‑CGAGTCATCCTGCACGACCCACCACTAATGACGGTGGGTTCGGTGGAAGTAGTTTGTAGTATCCAGCGCAGTATCGGGTGATTAGCTCAGCTGGGAGAGCACCt < 2:9139559/140‑1 (MQ=255) aCGTTGCGTCAGCAACGGCCCGTAGGGCGAG‑CGAAG‑CGAGTCATCCTGCACGACCCACCACTAATGACGGTGGGTTCGGTGGAAGTAGTTTGTAGTATCCAGCGCAGTATCGGGTGATTAGCTCAGCTGGGAGAGCACCt < 1:292078/140‑1 (MQ=255) ttGCGTCAGCAACGGCCCGTAGGGCGAG‑CGAAG‑CGAGTCATCCTGCACGACCCACCACTAATGACGGTGGGTTc > 1:4372206/1‑74 (MQ=255) ttGCGTCAGCAACGGCCCGTAGGGCGAG‑CGAAG‑CGAGTCATCCTGCACGACCCACCACTAATGACGGTGGGTTCGGTGGAAGTAGTTTGTAGTATCCAGCGCAGTATCGGGTGATTAGCTCAGCTGGGAGAGCACCTccc > 1:2581914/1‑140 (MQ=255) ttGCGTCAGCAACGGCCCGTAGGGCGAG‑CGAAG‑CGAGTCATCCTGCACGACCCACCACTAATGACGGTGGGTTCGGTGGAAGTAGTTTGTAGTATCCAGCGCAGTATCGGGTGATTAGCTCAGCTGGGAGAGCACCTccc < 2:4874204/140‑1 (MQ=255) tGCGTCAGCAACGGCCCGTAGGGCGAG‑CGAAG‑CGAGTCATCCTGCACGACCCACCACTAATGACGGTGGGTTCGGTGGAAGTAGTTTGTAGTATCCAGCGCAGTATCGGGTGATTAGCTCAGCTGGGAGAGCACCTCCCt > 2:4413179/1‑140 (MQ=255) tGCGTCAGCAACGGCCCGTAGGGCGAG‑CGAAG‑CGAGTCATCCTGCACGACCCACCACTAATGACGGTGGGTTCGGTGGAAGTAGTTTGTAGTATCCAGCGCAGTATCGGGTGATTAGCTCAGCTGGGAGAGCACCTCCCt > 1:8586940/1‑140 (MQ=255) tGCGTCAGCAACGGCCCGTAGGGCGAG‑CGAAG‑CGAGTCATCCTGCACGACCCACCACTAAGGACGGTGGGTTCGGTGGAAGTAGTTTGTAGTATCCAGCGCAGTATCGGGTGATTAGCTCAGCTGGGAGAGCACCGCCCt < 2:9617902/140‑1 (MQ=255) cGTCAGCAACGGCCCGTAGGGCGAG‑CGAAG‑CGAGTCATCCTGCACGACCCACCACTAATGACGGTGGTGTCTGTGGAAGTAGTGTGTACAATCCAGAGCAGTATCGGGTGATTAGCTCAGCTGGGAGAGCACCTCCCTTa > 1:4662519/1‑140 (MQ=37) cGTCAGCAACGGCCCGTAGGGCGAG‑CGAAG‑CGAGTCATCCTGCACGACCCACCACTAATGACGGGGGGGTCGGTGGTAGTAGGTTGTAGTATCCGGAGCAGTATCGGGTGAGGGGCGCGGCGGGGAGAGCACCTCCCtga > 2:5713308/1‑138 (MQ=21) tCAGCAACGGCCCGTAGGGCGAG‑CGAAG‑CGAGTCATCCTGCACGACCCACCACTAATGACGGTGGGTTCGGTGGAAGTAGTTTGTAGTATCCAGCGCAGTATCGGGTGATTAGCTCAGCTGGGAGAGCACCTCCCTTACa < 2:2863517/140‑1 (MQ=255) tCAGCAACGGCCCGTAGGGCGAG‑CGAAG‑CGAGTCATCCTGCACGACCCACCACTAATGACGGTGGGTTCGGTGGAAGTAGTTTGTAGTATCCAGCGCAGTATCGGGTGATTAGCTCAGCTGGGAGAGCACCTCCCTTACa < 2:6525209/140‑1 (MQ=255) gCAACGGCCCGTAGGGCGAG‑CGAAG‑CGAGTCATCCTGCACGACCCACCACTAATGACGGTGGGTTCGGTGGAAGTAGTTTGTAGTATCCAGCGCAGTATCGGGTGATTAGCTCAGCTGGGAGAGCACCTCCCTTACAagg < 2:159350/140‑1 (MQ=255) gCAACGGCCCGTAGGGCGAG‑CGAAG‑CGAGTCATCCTGCACGACCCACCACTAAAGACGGTGGGTTCGGTGGAAGTAGTTTGTAGTTTCCAGCGCAGTAGCGGGTGATTAGCTCAGCTGGGAGAGCACCACCCTAACAagg > 2:3321305/1‑140 (MQ=38) cAACGGCCCGTAGGGCGAG‑CGAAG‑CGAGTCATCCTGCACGACCCACCACTAATGACGGTGGGTTCGGTGGAAGTAGTTTgta < 2:7490123/82‑1 (MQ=255) cAACGGCCCGTAGGGCGAG‑CGAAG‑CGAGTCATCCTGCACGACCCACCACTAATGACGGTGGGTTCGGTGGAAGTAGTTTgta > 1:7490123/1‑82 (MQ=255) cAACGGCCCGTAGGGCGAG‑CGAAG‑CGAGTCATCCTGCACGACCCACCACTAATGACGGTGGGTTCGGTGGAAGTAGTTTGTAGTATCCAGCGCAGTATCGGGTGAGTAGCTCAGCTGGGAGAGCACCTCCCTTACAagga > 1:5537019/1‑140 (MQ=255) tAGGGCGAG‑CGAAG‑CGAGTCATCCTGCACGACCCACCACTAATGACGGTGGGTTCGGGNGAAGGAGGATGTAGTATCCAGCGCAGTATCGTGTGATTAGCTCAGCTGGTAGAGCACCTCCCTTACAAGGAGGGGGTcggc > 1:6318492/1‑140 (MQ=25) gag‑cgaAG‑CGAGTCATCCTGCACGACCCACCACTAATGACGGTGGGTTCGGTGGAAGTAGTTTGTAGTATCCAGCGCAGTATCGGGTGATTAGCTCAGCTGGGAGAGCACCTCCCTTACAAGGAGGGGGTCGGCGGTTCg > 1:2116615/1‑140 (MQ=255) gaag‑cgaGTCATCCTGCACGACCCACCACTAATGACGGTGGGTTCGGTGGAAGTAGTTTGTAGTATCCAGCGCAGTATCGGGTGATTAGCTCAGCTGGGAGAGCACCTCCCTTACAAGGAGGGGGTCGGCGGTTCGATcc < 1:8163751/140‑1 (MQ=255) cg‑cgaGTCATCCTGCACGACCCACCACTACTGACGGTGGGTTCGGTGGAATTCGTTTTTCGTATCCAGCGGCGTATCGGGTGATTTGATAAGATGTGAGAGCACCTCCCTTACAAGGAGGGGGTCGGCGGTTCGATCCCg < 1:1963071/139‑1 (MQ=21) ag‑cgaGTCATCCTGCACGACCCACCACTAATGACGGTGGGTTCGGTGGAAGTAGTTTGTAGTATCCAGCGCAGTATCGGGTGATTAGCTCAGCTGGGAGAGCACCTCCCTTACAAGGAGGGGGTCGGCGGTTCGATCCCg < 1:418467/140‑1 (MQ=255) aGTCATCCTGCACGACCCACCACTACTGACGGGGGGTTCGGTGGAAGTAGTTTGTAGTATCCAGCGCAGTATCGGGTGATTAGCTCAGCTGGGAGAGCACCTCCCTTACAAGGAGGGGGTCGGCGGTTCGATCCCGtcat < 1:8777934/140‑1 (MQ=255) aCCCACCACTAATGACGGTGGGTTCGGTGGAAGTAGTTTGTAGTATCCAGCGCAGTATCGGGTGATTAGCTCAGCTGGGAGAGCACCTCCCTTACAAGGAGGGGGTCGGCGGTTCGATCCCGTCATCACCCACCACTCgg < 1:9417285/140‑1 (MQ=255) cccACCACTAATGACGGTGGGTTCGGTGGAagtagt > 1:3475248/1‑36 (MQ=255) cccACCACTAATGACGGTGGGTTCGGTGGAAGTAGTTTGTAGTATCCAGCGCAGTATc > 2:2611784/1‑58 (MQ=255) cccACCACTAATGACGGTGGGTTCGGTGGAAGTAGTTTGTAGTATCCAGCGCAGTATCGGGTGATTAGCTCAGCTGGGAGAGCACCTCCCTTACAAGGAGGGGGTCGGCGGTTCGATCCCGTCATCACCCACCACTCggg > 1:82444/1‑140 (MQ=255) cccACCACTAATGACGGTGGGTTCGGTGGAAGTAGTTTGTAGTATCCAGCGCAGTATCGGGTGATTAGCTCAGCTGGGAGAGCACCTCCCTTACAAGGAGGGGGTCGGCGGTTCGATCCCGTCATCACCCACCACTCggg > 1:9681928/1‑140 (MQ=255) cccACCACTAATGACGGTGGGTTCGGTGGAAGTAGTTTGTAGTATCCAGCGCAGTATCGGGTGATTAGCTCAGCTGGGAGAGCACCTCCCTTACAAGGAGGGGGTCGGCGGTTCGATCCCGTCATCACCCACCACTCggg > 2:3485577/1‑140 (MQ=255) cccACCACTAATGACGGTGGGTTCGGTGGAAGTAGTTTGTAGTATCCAGCGCAGTATCGGGTGATTAGCTCAGCTGGGAGAGCACCTCCCTTACAAGGAGGGGGTCGGCGGTTCGATCCCGTCATCACCCACCACTCggg > 2:7017231/1‑140 (MQ=255) cccACCACTAATGACGGTGGGTTCGGTGGAAGTAGTTTGTAGTATCCAGCGCAGTATCGGGTGATTAGCTCAGCTGGGAGAGCACCTCCCTTACAAGGAGGGGGTCGGCGGTTCGATCCCGTCATCACCCACCACTCggg > 1:4562098/1‑140 (MQ=255) cccACCACTAATGACGGTGGGTTCGGTGGAAGTAGTTTGTAGTATCCAGCGCAGTATCGGGTGATTAGCTCAGCTGGGAGAGCACCTCCCTTACAAGGAGGGGGTCGGCGGTTCGATCCCGTCATCACCCACCACTCggg > 1:1751867/1‑140 (MQ=255) cccACCACTAATGACGGTGGGTTCGGTGGAAGTAGTTTGTAGTATCCAGCGCAGTATCGGGTGATTAGCTCAGCTGGGAGAGCACCTCCCTTACAAGGAGGGGGTCGGCGGTTCGATCCCGTCATCACCCACCACTCggg > 1:148569/1‑140 (MQ=255) cccACCACTAATGACGGTGGGTTCGGTGGAAGTAGTTTGTAGTATCCAGCGCAGTATCGGGTGATTAGCTCAGCTGGGAGAGCACCTCCCTTACAAGGAGGGGGTCGGCGGTTCGATCCCGTCATCACCCACCACTCggg > 1:1325803/1‑140 (MQ=255) cccACCACTAATGACGGTGGGTTCGGTGGAAGTAGTTTGTAGTATCCAGCGCAGTATCGGGTGATTAGCTCAGCTGGGAGAGCACCTCCCTTACAAGGAGGGGGTCGGCGGTTCGATCCCGTCATCACCCACCACTCggg > 2:3554451/1‑140 (MQ=255) caccacTAATGACGGTGGGTTCGGTGGAAGTAGTTTGTAGTATCCAGCGCAGTATCGGGTGATTAGCTCAGCTGGGAGAGCACCTCCCTTACACGGAGGGGGTCGGCGGTTCGATCCCGTCATCACCCACCACTCGGGTc > 2:7598904/1‑140 (MQ=255) | TTAATCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAGTTTTAACATCGAAGACAGATGTTAAGCGTGT‑AGGATAACGTTGCGTCAGCAACGGCCCGTAGGGCGAG‑CGAAG‑CGAGTCATCCTGCACGACCCACCACTAATGACGGTGGGTTCGGTGGAAGTAGTTTGTAGTATCCAGCGCAGTATCGGGTGATTAGCTCAGCTGGGAGAGCACCTCCCTTACAAGGAGGGGGTCGGCGGTTCGATCCCGTCATCACCCACCACTCGGGTCG > NZ_CP025268/779926‑780201 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |