| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| JC | NZ_CP025268 | 3,864,444 | +GCC | pseudogene (1078/1613 nt) | CXP41_RS20140 ← | PTS sugar transporter subunit IIB |
| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NZ_CP025268 | = 3864444 | 10 (0.020) | 518 (0.920) +GCC |
137/268 | 0.1 | 98.2% | pseudogene (1078/1613 nt) | CXP41_RS20140 | PTS sugar transporter subunit IIB |
| ? | NZ_CP025268 | 3864445 = | 10 (0.020) | pseudogene (1077/1613 nt) | CXP41_RS20140 | PTS sugar transporter subunit IIB | |||||
Only 100 of 551 total aligned reads displayed.
AGTGTGCGGAAAACCACGAAGTACAGCAGGGTAAAGCACAACCCAATGGCGATTTGGGTCAGCATCATATCCGCGTGGTTGCTGAACATCGGGATCCAGTTTTGCGGTAAAACTTAGTCAATCAGACCTC‑CG‑CC‑ATG‑‑‑T‑T‑‑‑CACCACACCA‑A‑AGAGATACATTACGGTCGACATTGAGGCCGCCAGCACGGCGTGTACCGCAAACAGCAACGGTGAAATGAACAGGAAGGTAAATTCCAGCGGTTCGGTAATTCCCACCAGCATGGCGGTT > NZ_CP025268/3864306‑3864574 | aGTGTGCGGAAAACCACGAAGTACAGCAGGGTAAAGCACAACCCAATGGCGATTTGGGTCAGCATCATATCCGCGTGGTTGCTGAACATCGGGATCCAGTTTTGCGGTAAAACCTAGTCAATCAGACCTC‑CGCCC‑ATG‑‑‑t‑t < 2:5225105/140‑1 (MQ=255) gtgtGCGGAAAACCACGAAGTACAGCAGGGTAAAGCACAACCCAATGGCGATTTGGGTCAGCATCATATCCGCGTGGTTGCTGAACATCGGGATCCAGTTTTGCGGTAAAACCTAGTCAATCAGACCTC‑CGCCC‑ATG‑‑‑T‑Tg < 2:8806529‑M1/140‑2 (MQ=255) gtgCGGAAAACCACGAAGTACAGCAGGGTAAAGCACAACCCAATGGCGATTTGGGTCAGCATCATATCCGCGTGGTTGCTGAACATCGGGATCCAGTTTTGCGGTAAAACCTAGTCAATCAGACCTC‑CGCCC‑ATG‑‑‑T‑Tgcc < 2:9102968‑M1/140‑4 (MQ=255) gtgCGGAAAACCACGAAGTACAGCAGGGTAAACCACAACCCAATGGCGATTTGGGTCAGCATCATCTCCGCGTGGTTGCTGAACATCGGGATCCAGTTTTGCGGTAAAACCTAGTCAATCAGACCTC‑CGCCC‑ATG‑‑‑T‑Tgcc < 2:8496114‑M1/140‑4 (MQ=255) gCGGAAAACCACGAAGTACAGCAGGGTAAAGCACAACCCAATGGCGATTTGGGTCAGCATCATATCCGCGTGGTTGCTGAACATCGGGATCCAGTTTTGCGGTAAAACCTAGTCAATCAGACCTC‑CGCCC‑ATG‑‑‑T‑Tgccca < 2:9665062‑M1/140‑6 (MQ=255) cGGAAAACCACGAAGTACAGCAGGGTAAAGCACAACCCAATGGCGATTTGGGTCAGCATCATATCCGCGTGGTTGCTGAACATCGGGATCCAGTTTTGCGGTAAAACCTAGTCAATCAGACCTC‑CGCCC‑ATG‑‑‑T‑Tgcccac > 1:4404632‑M1/1‑134 (MQ=255) cGGAAAACCACGAAGTACAGCAGGGTAAAGCACAACCCAATGGCGATTTGGGTCAGCATCATATCCGCGTGGTTGCTGAACATCGGGATCCAGTTTTGCGGTAAAACCTAGTCAATCAGACCTC‑CGCCC‑ATG‑‑‑T‑Tgcccac < 1:1003080‑M1/140‑7 (MQ=255) cGGAAAACCACGAAGTACAGCAGGGTAAAGCACAACCCAATGGCGATTTGGGTCAGCATCATATCCGCGTGGTTGCTGAACATCGGGATCCAGTTTTGCGGTAAAACCTAGTCAATCAGACCTC‑CGCCC‑ATG‑‑‑T‑Tgcccac < 1:2931230‑M1/140‑7 (MQ=255) cGGAAAACCACGAAGTACAGCAGGGTAAAGCACAACCCAATGGCGATTTGGGTCAGCATCATATCCGCGTGGTTGCTGAACATCGGGATCCAGTTTTGCGGTAAAACCTAGTCAATCAGACCTC‑CGCCC‑ATG‑‑‑G‑Tgcccac < 2:3982858‑M1/140‑7 (MQ=255) cGGAAAACCACGAAGTACAGCAGGGTAAAGCACAACCCAATGGCGATTTGGGTCAGCATCAGATCCGCGTGGTTGCTGAACATCGGGATCCAGTTTTGCGGTAAAACCTAGTCAATCAGACCTC‑CGCCC‑ATG‑‑‑T‑Tgcccac < 2:5973674‑M1/140‑7 (MQ=255) aaCCACGAAGTACAGCAGGGTAAAGCACAACCCAATGGCGATTTGGGTCAGCATCATATCCGCGTGGTTGCTGAACATCGGGATCCAGTTTTGCGGTAAAACCTAGTCAATCAGACCTC‑CGCCC‑ATG‑‑‑T‑Tgcccaccacac < 2:8111211‑M1/140‑12 (MQ=255) aaCCACGAAGTACAGCAGGGTAAAGCACAACCCAATGGCGATTTGGGTCAGCATCATATCCGCGTGGTTGCTGAACATCGGGATCCAGTTTTGCGGTAAAACCTAGTCAATCAGACCTC‑CGCCC‑ATG‑‑‑T‑Tgcccaccacac < 1:2268106‑M1/140‑12 (MQ=255) cACGAAGTACAGCAGGGTAAAGCACAACCCAATGGCGATTTGGGTCAGCATCATATCCGCGTGGTTGCTGAACATCGGGATCCAGTTTTGCGGTAAAACCTAGTCAATCAGACCTC‑CGCCC‑ATG‑‑‑T‑Tgcccaccacaccaa < 1:7902664‑M1/140‑15 (MQ=255) aCGAAGTACAGCAGGGTAAAGCACAACCCAATGGCGATTTGGGTCAGCATCATATCCGCGTGGTTGCTGAACATCGGGATCCAGTTTTGCGGTAAAACCTAGTCAATCAGACCTC‑CGCCC‑ATG‑‑‑T‑Tgcccaccacaccaaa < 2:3901102‑M1/140‑16 (MQ=255) aCGAAGTACAGCAGGGTAAAGCACAACCCAATGGCGATTTGGGTCAGCATCATATCCGCGTGGTTGCTGAACATCGGGATCCAGTTTTGCGGTAAAACCTAGTCAATCAGACCTC‑CGCCC‑ATG‑‑‑T‑Tgcccaccacaccaaa < 1:7089689‑M1/140‑16 (MQ=255) cGAAGTACAGCAGGGTAAAGCACAACCCAATGGCGATTTGGGTCAGCATCATATCCGCGTGGTTGCTGAACATCGGGATCCAGTTTTGCGGTAAAACCTAGTCAATCAGACCTC‑CGCCC‑ATG‑‑‑T‑Tgcccaccacaccaaag < 1:4816307‑M1/140‑17 (MQ=255) aGTACAGCAGGGTAAAGCACAACCCAATGGCGATTTGGGTCAGCATCATATCCGCGTGGTTGCTGAACATCGGGATCCAGTTTTGCGGTAAAACCTAGTCAATCAGACCTC‑CGCCC‑ATG‑‑‑T‑Tgcccaccacaccaaagaga > 1:9311481‑M1/1‑121 (MQ=255) aGTACAGAAGGGTAAAGCACAACCCAATGGCGATTTGGGTCAGCATCATATCCGCGTGGTTGCTGAACATCGGGATCCAGTTTTGCGGTAAAACCTAGTCAATCAGACCTC‑CGCCC‑ATG‑‑‑T‑Tgcccaccacaacaaagaga < 2:4453133‑M1/140‑20 (MQ=255) tACAGCAGGGTAAAGCACAACCCAATGGCGATTTGGGTCAGCATCATATCCGCGTGGTTGCTGAACATCGGGATCCAGTTTTGCGGTAAAACCTAGTCAATCAGACCTC‑CGCCC‑ATG‑‑‑T‑Tgcccaccacaccaaagagata > 1:715752‑M1/1‑119 (MQ=255) cagGGTAAAGCACAACCCAATGGCGATTTGGGTCAGCATCATATCCGCGTGGTTGCTGAACATCGGGATCCAGTTTTGCGGTAAAACCTAGTCAATCAGACCTC‑CGCCC‑ATG‑‑‑T‑Tgcccaccacaccaaagagatacatta < 2:3440607‑M1/140‑27 (MQ=255) gggTAAAGCACAACCCAATGGCGATTTGGGTCAGCATCATATCCGCGTGGTTGCTGAACATCGGGATCCAGTTTTGCGGTAAAACCTAGTCAATCAGACCTC‑CGCCC‑ATG‑‑‑T‑Tgcccaccacaccaaagagatacattacg > 2:1588399‑M1/1‑112 (MQ=255) gTAAAGCACAACCCAATGGCGATTTGGGTCAGCATCATATCCGCGTGGTTGCTGAACATCGGGATCCAGTTTTGCGGTAAAACCTAGTCAATCAGACCTC‑CGCCC‑ATG‑‑‑T‑Tgcccaccacaccaaagagatacattacggt < 1:6350669‑M1/140‑31 (MQ=255) tAAAGCACAACCCAATGGCGATTTGGGTCAGCATCATATCCGCGTGGTTGCTGAACATCGGGATCCAGTTTTGCGGTAAAACCTAGTCAATCAGACCTC‑CGCCC‑ATG‑‑‑T‑Tgcccaccacaccaaagagatacattacggtc > 2:4290122‑M1/1‑109 (MQ=255) tAAAGCACAACCCAATGGCGATTTGGGTCAGCATCATATCCGCGTGGTTGCTGAACATCGGGATCCAGTTTTGCGGTAAAACCTAGTCAATCAGACCTC‑CGCCC‑ATG‑‑‑T‑Tgcccaccacaccaaagagatacattacggtc > 1:9150371‑M1/1‑109 (MQ=255) tAAAGCACAACCCAATGGCGATTTGGGTCAGCATCATATCCGCGTGGTTGCTGAACATCGGGATCCAGTTTTGCGGTAAAACCTAGTCAATCAGACCTC‑CGCCC‑ATG‑‑‑T‑Tgcccaccacaccaaagagatacattacggtc > 2:272612‑M1/1‑109 (MQ=255) caaaGCACAACCCACACGCGAAATGGCTCCCCATCATACCCGCGTGGTTGCTGAACATCGCGAGCCAGATTTGCCTTAAAACCTAGTCAATCAGACCTC‑CGCCC‑ATC‑‑‑T‑TGCCCACCACACCA‑A‑AGAGATACATTACGGTc < 2:6861492/139‑1 (MQ=255) aaGCACAACCCAATGGCGATTGGGGTCAGCATCATATCCGCGTGGTTGCTGAACATCGGGATCCAGTTTTGCGGTAAAACCTAGTCAATCAGACCTC‑CGCCC‑ATG‑‑‑T‑Tgcccaccacaccaaagagatacattacggtcga > 2:1776261‑M1/1‑107 (MQ=255) aaCCCAATGGCGATTTGGGTCAGCATCATATCCGCGTGGTTGCTGAACATCGGGATCCAGTTTTGCGGTAAAACCTAGTCAATCAGACCTC‑CGCCC‑ATG‑‑‑T‑Tgcccaccacaccaaagagatacattacggtcgacattga > 1:8472031‑M1/1‑101 (MQ=255) aaCCCAATGGCGATTTGGGTCAGCATCATATCCGCGTGGTTGCTGAACATCGGGATCCAGTTTTGCGGTAAAACCTAGTCAATCAGACCTC‑CGCCC‑ATG‑‑‑T‑Tgcccaccacaccaaagagatacattacggtcgacattga > 1:516227‑M1/1‑101 (MQ=255) aaCCCAATGGCGAGTTGGGTCAGCATCATATCCGCGTGGTTGCTGACCATCGGGATCCAGTTTTGCGGTAAAACCTAGTCAATCAGACCTC‑CGCCC‑ATG‑‑‑T‑Tgcccaccacaccaaagagatacattacggtcgacattga > 1:4591253‑M1/1‑101 (MQ=255) aCCCAATGGCGATTTGGGTCAGCATCATATCCGCGTGGTTGCTGAACATCGGGATCCAGTTTTGCGGTAAAACCTAGTCAATCAGACCTC‑CGCCC‑ATG‑‑‑T‑Tgcccaccacaccaaagagatacattacggtcgacattgag < 1:5524933‑M1/140‑41 (MQ=255) aCCCAATGGCGATTTGGGTCAGCATCATATCCGCGTGGTTGCTGAACATCGGGATCCAGTTTTGCGGTAAAACCTAGTCAATCAGACCTC‑CGCCC‑ATG‑‑‑T‑Tgcccaccacaccaaagagatacattacggtcgacattgag < 1:1939148‑M1/140‑41 (MQ=255) aCCCAATGGCGATTTGGGTCAGCATCATATCCGCGTGGTTGCTGAACATCGGGATCCAGTTTTGCGGTAAAACCTAGTCAATCAGACCTC‑CGCCC‑ATG‑‑‑T‑Tgcccaccacaccaaagagatacattacggtcgacattgag < 2:7747572‑M1/140‑41 (MQ=255) aCCCAATGGCGATTTGGGTCAGCATCATATCCGCGTGGTTGCTGAACATCGGGATCCAGTTTTGCGGTAAAACCTAGTCAATCAGACCTC‑CGCCC‑ATG‑‑‑T‑Tgcccaccacaccaaagagatacattacggtcgacattgag < 1:5256031‑M1/140‑41 (MQ=255) cccAATGGCGATTTGGGTCAGCATCATATCCGCGTGGTTGCTGAACATCGGGATCCCGTTTTGCGGTCCATCCTAGTCAATCAGACCTC‑CGCCC‑ATG‑‑‑T‑Tgcccaccacacccaagagatacaatacggtcgacagtgagg > 2:8025526‑M1/1‑99 (MQ=255) cccAATGGCGATTTGGGTCAGCATCATATCCGCGTGGTTGCTGAACATCGGGATCCAGTTTTGCGGTAAAACCTAGTCAATCAGACCTC‑CGCCC‑ATG‑‑‑T‑Tgcccaccacaccaaagagatacattacggtcgacattgagg > 2:2900002‑M1/1‑99 (MQ=255) ccAATGGCGATTTGGGTCAGCATCATATCCGCGTGGTTGCTGAACATCGGGATCCAGTTTTGCGGTAAAACCTAGTCAATCAGACCTC‑CGCCC‑ATG‑‑‑T‑Tgcccaccacaccaaagagatacattacggtcgacattgaggc < 2:7866994‑M1/140‑43 (MQ=255) aTGGCGATTTGGGTCAGCATCATATCCGCGTGGTTGCTGAACATCGGGATCCAGTTTTGCGGTAAAACCTAGTCAATCAGACCTC‑CGCCC‑ATG‑‑‑T‑Tgcccaccacaccaaagagatacattacggtcgacattgaggccgc < 2:1663882‑M1/140‑46 (MQ=255) tGGCGATTTGGGTCAGCATCATATCCGCGTGGTTGCTGAACATCGGGATCCAGTTTTGCGGTAAAACCTAGTCAATCAGACCTC‑CGCCC‑ATG‑‑‑T‑Tgcccaccacaccaaagagatacattacggtcgacattgaggccgcc > 2:3740319‑M1/1‑94 (MQ=255) tGGCGATTTGGGTCAGCATCATATCCGCGTGGTTGCTGAACATCGGGATCCAGTTTTGCGGTAAAACCTAGTCAATCAGACCTC‑CGCCC‑ATG‑‑‑T‑Tgcccaccacaccaaagagatacattacggtcgacattgaggccgcc > 1:7977469‑M1/1‑94 (MQ=255) cGATTTGGGTCAGCATCCTATCCGCGTGGTTGCTGAACATCGGGATCCAGTTTTGCGGTAAAACCTAGTCAATCAGACCTC‑CGCCC‑ATG‑‑‑T‑Tgcccaccacaccaaagagatacattacggtcgacattgaggccgccagc < 1:6508471‑M1/140‑50 (MQ=255) cGATTTGGGTCAGCATCATATCCGCGTGGTTGCTGAACATCGGGATCCAGTTTTGCGGTAAAACCTAGTCAATCAGACCTC‑CGCCC‑ATG‑‑‑T‑Tgcccaccacaccaaagagatacattacggtcgacattgaggccgccagc < 1:8752240‑M1/140‑50 (MQ=255) cGATTTGGGTCAGCATCATATCCGCGTGGTTGCTGAACATCGGGATCCAGTTTTGCGGTAAAACCTAGTCAATCAGACCTC‑CGCCC‑ATG‑‑‑T‑Tgcccaccacaccaaagagatacattacggtcgacattgaggccgccagc < 1:5871988‑M1/140‑50 (MQ=255) cGATTTGGGTCAGCATCATATCCGCGTGGTTGCTGAACATCGGGATCCAGTTTTGCGGTAAAACCTAGTCAATCAGACCTC‑CGCCC‑ATG‑‑‑T‑Tgcccaccacaccaaagagatacattacggtcgacattgaggccgccagc < 2:56833‑M1/140‑50 (MQ=255) cGATTTGGGTCAGCATCATATCCGCGTGGTTGCTGAACATCGGGATCCAGTTTTGCGGTAAAACCTAGTCAATCAGACCTC‑CGCCC‑ATG‑‑‑T‑Tgcccaccacaccaaagagatacattacggtcgacattgaggccgccagc > 1:2792626‑M1/1‑91 (MQ=255) cGATTTGGGTCAGCATCATATCCGCGTGGTTGCTGAACATCGGGATCCAGTTTTGCGGTAAAACCTAGTCAATCAGACCTC‑CGCCC‑ATG‑‑‑T‑Tgcccaccacaccaaagagatacattacggtcgacattgaggccgccagc < 1:8324741‑M1/140‑50 (MQ=255) cGATTTGGGTCAGCATCATATCCGCGTGGTTGCTGAACATCGGGATCCAGTTTTGCGGTAAAACCTAGTCAATCAGACCTC‑CGCCC‑ATG‑‑‑T‑Tgcccaccacaccaaagagatacattacggtcgacattgaggccgccagc < 1:6775397‑M1/140‑50 (MQ=255) cGAGTTGGGTCAGCATCCTCTCCGCGTGGTTGCTGCACATCGGGATCCAGTTTTGCGGTAAAACCTAGTCAATCAGACCTC‑CGCCC‑ATG‑‑‑T‑Tgccccccactcccaagagatacattacggtcgacattgaggccgccagc > 2:4765166‑M1/1‑91 (MQ=255) gATTTGGGTCAGCATCATATCCGCGTGGTTGCTGAACATCGGGATCCAGTTTTGCGGTAAAACCTAGTCAATCAGACCTC‑CGCCC‑ATG‑‑‑T‑Tgcccaccacaccaaagagatacattacggtcgacattgaggccgccagca < 1:3170849‑M1/140‑51 (MQ=255) atatgggTCAGCATCATATCCGCGTGGTTGCTGAACATCGGGATCCAGTTATGCGGTAAAACCTAGTCAATCAGACCTC‑CGCCC‑ATG‑‑‑T‑Tgcccaccacaccaaagagatacattacggtcgacattgaggccgccagcac > 1:3824320‑M1/4‑89 (MQ=255) aTTTGGGTCAGCATCATATCCGCGTGGTTGCTGAACATCGGGATCCAGTTTTGCGGTAAAACCTAGTCAATCAGACCTC‑CGCCC‑ATG‑‑‑T‑Tgcccaccacaccaaagagatacattacggtcgacattgaggccgccagcac < 1:8953429‑M1/140‑52 (MQ=255) aTTTGGGTCAGCATCATATCCGCGTGGTTGCTGAACATCGGGATCCAGTTTTGCGGTAAAACCTAGTCAATCAGACCTC‑CGCCC‑ATG‑‑‑T‑Tgcccaccacaccaaagagatacattacggtcgacattgaggccgccagcac > 2:9428241‑M1/1‑89 (MQ=255) tttGGGTCAGCATCATATCCGCGTGGTTGCTGAACATCGGGATCCAGTTTTGCGGTAAAACCTAGTCAATCAGACCTC‑CGCCC‑ATG‑‑‑T‑Tgcccaccacaccaaagagatacattacggtcgacattgaggccgccagcacg < 1:9548836‑M1/140‑53 (MQ=255) tGGGTCAGCCTCATATCCGCGTGGTTGCTGAACATCGGGATCCAGTTTTGCGGTAAAACCTAGTCAATCAGACCTC‑CGCCC‑ATG‑‑‑T‑Tgcccaccacaccaaagagatacattccggtcgacattgaggccgccagcacggc < 2:8683295‑M1/140‑55 (MQ=255) cAGCATCCTATCCGCGTGGTTGCTGAACATCGGGATCCAGTTTTGCGGTAAAACCTAGTCAATCAGACCTC‑CGCCC‑ATG‑‑‑T‑Tgcccaccacaccaaagagatacattacggtcgacattgaggccgccagcacggcgtgta < 2:9766006‑M1/140‑60 (MQ=255) cAGCATCATATCCGCGTGGTTGCTGAACATCGGGATCCAGTTTTGCGGTAAAACCTAGTCAATCAGACCTC‑CGCCC‑ATG‑‑‑T‑Tgcccaccacaccaaagagatacattacggtcgacattgaggccgccagcacggcgtgta < 1:7275863‑M1/140‑60 (MQ=255) atatCCGCGTGGTTGCTGAACATCGGGATCCAGTTTTGCGGTAAAACCTAGTCAATCAGACCTC‑CGCCC‑ATG‑‑‑T‑Tgcccaccacaccaaagagatacattacggtcgacattgaggccgccagcacggcgtgtaccgcaaa > 2:3292513‑M1/1‑74 (MQ=255) tatCCGCGTGGTTGCTGAACATCGGGATCCAGTTTTGCGGTAAAACCTAGTCAATCAGACCTC‑CGCCC‑ATG‑‑‑T‑Tgcccaccacaccaaagagagatacattacggtcgacattgaggccgccagcacggcgtgtaccgcaa > 1:5483240‑M1/1‑73 (MQ=255) tCCGCGTGGTTGCTGAACATCGGGATCCAGTTTTGCGGTAAAACCTAGTCAATCAGACCTC‑CGCCC‑ATG‑‑‑T‑Tgcccaccacaccaaagagatacattacggtcgacattgaggccgccagcacggcgtgtaccgcaaacag > 1:9779851‑M1/1‑71 (MQ=255) tCCGCGTGGTTGCTGAACATCGGGATCCAGTTTTGCGGTAAAACCTAGTCAATCAGACCTC‑CGCCC‑ATG‑‑‑T‑Tgcccaccacaccaaagagatacattacggtcgacattgaggccgccagcacggcgtgtaccgcaaacag < 1:7584245‑M1/140‑70 (MQ=255) accGCGTTGTTGCCGCACATCGGGATCCCGTTTTGCGGTACACCCTCGCCAATCAGACCACACC‑CC‑CTGGGCC‑C‑‑‑CACCCCACCA‑C‑ACCGCCACATCCCGGTCGTCAGTGAGGCCTCCACCACGGCGTGTACCGCAAACAg < 2:465195/139‑1 (MQ=255) cgcgTGGTTGCTGAACATCGGGATCCAGTTTTGCGGTAAAACCTAGTCAATCAGACCTC‑CGCCC‑ATG‑‑‑T‑Tgcccaccacaccaaagagatacattacggtcgacattgaggccgccagcacggcgtgtaccgcaaacagca < 1:3971423‑M1/140‑72 (MQ=255) gcgTGGTTGCTGAACATCGGGATCCAGTTTTGCGGTAAAACCTAGTCAATCAGACCTC‑CGCCC‑ATG‑‑‑T‑Tgcccaccacaccaaagagatacattacggtcgacattgaggccgccagcacggcgtgtaccgccaacagcaa > 2:4834845‑M1/1‑68 (MQ=255) gcgTGGTTGCTGAACATCGGGATCCAGTTTTGCGGTAAAACCTAGTCAATCAGACCTC‑CGCCC‑ATG‑‑‑T‑Tgcccaccacaccaaagagatacattacggtcgacattgaggccgccagcacggcgtgtaccgcaaacagcaa < 2:2082267‑M1/140‑73 (MQ=255) gcgTGGTTGCTGAACATCGGGATCCAGTTTTGCGGTAAAACCTAGTCAATCAGACCTC‑CGCCC‑ATG‑‑‑T‑Tgcccaccacaccaaagagatacattacggtcgacattgaggccgccagcacggcgtgtaccgcaaacagcaa > 1:1774662‑M1/1‑68 (MQ=255) gcgTGGTTGCTGAACATCGGGATCCAGTTTTGCGGTAAAACCTAGTCAATCAGACCTC‑CGCCC‑ATG‑‑‑T‑Tgcccaccacaccaaagagatacattacggtcgacattgaggccgccagcacggcgtgtaccgcaaacagcaa > 1:6018370‑M1/1‑68 (MQ=255) cgTGGTTGCTGAACATCGGGATCCAGTTTTGCGGTAAAACCTAGTCAATCAGACCTC‑CGCCC‑ATG‑‑‑T‑Tgcccaccacaccaaagagatacattacggtcgacattgaggccgccagcacggcgtgtaccgcaaacagcaac > 2:554248‑M1/1‑67 (MQ=255) gTGGTTGCTGAACATCGGGATCCAGTTTTGCGGTAAAACCTAGTCAATCAGACCTC‑CGCCC‑ATG‑‑‑T‑Tgcccaccacaccaaagagatacattacggtcgacattgaggccgccagcacggcgtgtaccgcaaacagcaacg < 2:3583540‑M1/140‑75 (MQ=255) gTGGTTGCTGAACATCGGGATCCAGTTTTGCGGTAAAACCTAGTCAATCAGACCTC‑CGCCC‑ATG‑‑‑T‑Tgcccaccacaccaaagagatacattacggtcgacattgaggccgccagcacggcgtgtaccgcaaacagcaacg < 2:7505437‑M1/140‑75 (MQ=255) gTGGTTGCTGAACATCGGGATCCAGTTTTGCGGTAAAACCTAGTCAATCAGACCTC‑CGCCC‑ATG‑‑‑T‑Tgcccaccacaccaaagagatacattacggtcgacattgaggccgccagcacggcgtgtaccgcaaacagcaacg < 1:2510467‑M1/140‑75 (MQ=255) gTGGTTGCTGAACATCGGGATCCAGTTTTGCGGTAAAACCTAGTCAATCAGACCTC‑CGCCC‑ATG‑‑‑T‑Tgcccaccacaccaaagagatacattacggtcgacattgaggccgccagcacggcgtgtaccgcaaacagcaacg < 1:8530895‑M1/140‑75 (MQ=255) gTTGCTGAACATCGGGATCCAGTTTTGCGGTAAAACCTAGTCAATCAGACCTC‑CGCCC‑ATG‑‑‑T‑Tgcccaccacaccaaagagatacattacggtcgacattgaggccgccagcacggcgtgtaccgcaaacagcaacggtg > 2:1095096‑M1/1‑63 (MQ=255) tGCTGAACATCGGGATCCAGTTTTGCGGTAAAACCTAGTCAATCAGACCTC‑CGCCC‑ATG‑‑‑T‑Tgcccaccacaccaaagagatacattacggtcgacattgaggccgccagcacggcgtgtaccgcaaacagcaacggtgaa > 2:3069238‑M1/1‑61 (MQ=255) cTGAACATCGGGATCCAGTTTTGCGGTAAAACCTAGTCAATCAGACCTC‑CGCCC‑ATG‑‑‑T‑Tgcccaccacaccaaagagatacattacggtcgacattgaggccgccagcacggcgtgtaccgcaaacagcaacggtgaaat > 1:2689601‑M1/1‑59 (MQ=255) aaCATCGGGATCCAGTTTTGCGGTAAAACCTAGTCAATCAGACCTC‑CGCCC‑ATG‑‑‑T‑Tgcccaccacaccaaagagatacattacggtcgacattgaggccgccagcacggcgtgtaccgcaaacagcaacggtgaaatgaa < 2:2355339‑M1/140‑85 (MQ=255) aCATCGGGATCCAGTTTTGCGGTAAAACCTAGTCAATCAGACCTC‑CGCCC‑ATG‑‑‑T‑Tgcccaccacaccaaagagatacattacggtcgacattgaggccgccagcacggcgtgtaccgcaaacagcaacggtgaaatgaac < 2:6084752‑M1/140‑86 (MQ=255) tCGGGATCCAGTTTTGCGGTAAAACCTAGTCAATCAGACCTC‑CGCCC‑ATG‑‑‑T‑Tgcccaccacaccaaagagatacattacggtcgacattgaggccgccagcacggcgtgtaccgcaaacagcaacggtgaaatgaacagg > 2:9178437‑M1/1‑52 (MQ=255) tCGGGATCCAGTTTTGCGGTAAAACCTAGTCAATCAGACCTC‑CGCCC‑ATG‑‑‑T‑Tgcccaccacaccaaagagatacattacggtcgacattgaggccgccagcacggcgtgtaccgcaaacagcaacggtgaaatgaacagg < 2:6306426‑M1/140‑89 (MQ=255) cGGGATCCAGTTTTGCGGTAAAACCTAGTCAATCAGACCTC‑AG‑CCAATG‑‑‑T‑Ttcacaccacaccaaagagatacatttcggtcgacattgaggccgccatcccggcgtgtaccgcaaacagcaacggtgaaatgaacagga < 2:6172781‑M1/140‑90 (MQ=255) cAGTTTTGCGGTAAAACCTAGTCAATCAGACCTC‑CGCCC‑ATG‑‑‑T‑Tgccccccacaccaaagagatacattacggtcgacattgaggccgccagcacggcgtgtaccgcaaacagcaacggtgaaatgaacaggaaggtaca > 2:7354778‑M1/1‑44 (MQ=255) ttttGCGGTAAAACCTAGTCAATCAGACCTC‑CGCCC‑ATG‑‑‑T‑Tgcccaccacaccaaagagatacattacggtcgacattgaggccgccagcacggcgtgtaccgcaaacagcaacggtgaaatgaacaggaaggtaaattc > 2:1354037‑M1/1‑41 (MQ=255) tGCGGTAAAACCTAGTCAATCAGACCTC‑CGCCC‑ATG‑‑‑T‑Tgcccaccacaccaaagagatacattacggtcgacattgaggccgccagcacggcgtgtaccgcaaacagcaacggtgaaatgaacaggaaggtaaattccag < 1:1351750‑M1/140‑103 (MQ=255) tGCGGTAAAACCTAGTCAATCAGACCTC‑CG‑CCGATG‑‑‑TGG‑‑‑CACACCTCCAGATAGAGATTCATTTCGGTCGTCATTGAGGCCGCCAGCACGGCGTGTACCGCAAACAGCATCGGTGTATTGTTCAGGAAGGTTAATTCCAg < 2:6991782/140‑1 (MQ=255) ggTAAAACCTAGTCAATCAGACCTC‑CGCCC‑ATG‑‑‑T‑Tgcccaccacaccaaagagatacattacggtcgacattgaggccgccagcacggcgtgtaccgcaaacagcaacggtgaaatgaacaggaaggtaaattccagcgg < 1:1219443‑M1/140‑106 (MQ=255) tAAAACCGAGTCAATCAGACCTC‑CGCCC‑ATG‑‑‑T‑Tgcccaccacaccaaagagatacattacggtcgacattgaggccgccagcacggcgtgtaccgcaaacagcaacggtgaaatgaacaggaaggtaaattccagcggtt < 2:8278308‑M1/140‑108 (MQ=255) gagTCAATCAGACCTC‑CGCCC‑ATG‑‑‑G‑Tgcccaccacaccaaagagatacattacggtcgacattgaggccgccagcacggcgtgtaccgcaaacagcaacggtgaaatgaacaggaaggtaaattccagcggttcggtaat < 1:8142263‑M1/139‑115 (MQ=255) aGTCAATCAGACCTC‑CGCCC‑ATG‑‑‑T‑Tgcccaccacaccaaagagatacattacggtcgacattgaggccgccagcacggcgtgtaccgcaaacagcaacggtgaaatgaacaggaaggtaaattccagcggttcggtaatt > 1:8577554‑M1/1‑25 (MQ=255) tCAATCAGACCTC‑CGCCC‑ATG‑‑‑T‑Tgcccaccacaccaaagagatacattacggtcgacattgaggccgccagcacggcgtgtaccgcaaacagcaacggtgaaatgaacaggaaggtaaattccagcggttcggtaattcc > 1:3331457‑M1/1‑23 (MQ=255) tCAGACCTC‑CGCCC‑ATG‑‑‑T‑Tgcccaccacaccaaagagatacattacggtcgacattgaggccgccagcacggcgtgtaccgcaaacagcaacggtgaaatgaacaggaaggtaaattccagcggttcggtaattcccacc > 2:1875240‑M1/1‑19 (MQ=255) aGACCTC‑CGCCC‑ATG‑‑‑T‑Tgcccaccacaccaaagagatacattacggtcgacattgaggccgccagcacggcgtgtaccgcaaacagcaacggtgaaatgaacaggaaggtaaattccagcggttcggtaattcccaccag < 1:6092471‑M1/140‑124 (MQ=255) aCCTC‑CGCCC‑ATG‑‑‑T‑Tgcccaccacaccaaagagatacattacggtcgacattgaggccgccagcacggcgtgtaccgcaaacagcaacggtgaaatgaacaggaaggtaaattccagcggttcggtaattcccaccagca < 2:4997087‑M1/140‑126 (MQ=255) ccTC‑CGCCC‑ATG‑‑‑T‑Tgcccaccacaccaaagagatacattacggtcgacattgaggccgccagcacggcgtgtaccgcaaacagcaacggtgaaatgaacaggaaggtaaattccagcggttcggtaattcccaccagcat > 1:3636095‑M1/1‑14 (MQ=255) ccTC‑CGCCC‑ATG‑‑‑G‑Tgcccaccacaccaaagagatacattacggtcgacattgaggccgccagcacggcgtgtaccgcaaacagcaacggtgaaatgaacaggaaggtaaattccagcggttcggtaattcccaccagcag < 1:1448122‑M1/140‑127 (MQ=255) cTC‑CGCCC‑ATG‑‑‑T‑Tgcccaccacaccaaagagatacattacggtcgacattgaggccgccagcacggcgtgtaccgcaaacagcaacggtgaaatgaacaggaaggtaaattccagcggttcggtaattcccaccagcatg < 1:7445754‑M1/140‑128 (MQ=255) ctccgacc‑atg‑‑‑t‑tgcccaccacaccaaagagatacattacggtcgacattgaggccgccagcacggcgtgtaccgcaaacagcacctgtgaaatgaacaggaaggtaaattccagcggttcggtaattcccacctgcatg < 2:3151208‑M1/134‑128 (MQ=255) ccgccc‑atg‑‑‑t‑Tgcccaccacaccaaagagatacattacggtcgacattgaggccgccagcacggcgtgtaccgcaaacagcaacggtgaaatgaacaggaaggtaaattccagcggttcggtaattcccaccagcatggc > 1:4144601‑M1/5‑11 (MQ=255) cgccc‑atg‑‑‑T‑Tgcccaccacaccaaagagatacattacggtcgacattgaggccgccagcacggcgtgtaccgcaaacagcaacggtgaaatgaacaggaaggtaaattccagcggttcggtaattcccaccagcatggcg > 1:659104‑M1/4‑10 (MQ=255) cgccc‑atg‑‑‑T‑Tgcccaccacaccaaagagatacattacggtcgacattgaggccgccagcacggcgtgtaccgcaaacagcaaaggtgaaatgaacaggaaggtaaattccagcggttcggtaattcccaccagcatggcg > 2:4144211‑M1/4‑10 (MQ=255) aTG‑‑‑T‑Tgcccaccacaccaaagagatacattacggtcgacattgaggccgccagcacggcgtgtaccgcaaacagcaacggtgaaatgaacaggaaggtaaattccagcggttcggtaattcccaccagcatggcggttaa < 1:695529‑M1/140‑136 (MQ=255) aTG‑‑‑T‑Tgcccaccacaccaaagagatacattacggtcgacattgaggccgccagcacggcgtgtaccgcaaacagcaacggtgaaatgaacaggaaggtaaattccagcggttcggtaattcccaccagcatggcggttaa < 2:3523345‑M1/140‑136 (MQ=255) | AGTGTGCGGAAAACCACGAAGTACAGCAGGGTAAAGCACAACCCAATGGCGATTTGGGTCAGCATCATATCCGCGTGGTTGCTGAACATCGGGATCCAGTTTTGCGGTAAAACTTAGTCAATCAGACCTC‑CG‑CC‑ATG‑‑‑T‑T‑‑‑CACCACACCA‑A‑AGAGATACATTACGGTCGACATTGAGGCCGCCAGCACGGCGTGTACCGCAAACAGCAACGGTGAAATGAACAGGAAGGTAAATTCCAGCGGTTCGGTAATTCCCACCAGCATGGCGGTT > NZ_CP025268/3864306‑3864574 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |